Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77282.t1 | XP_013448778.1 | 89.1 | 220 | 10 | 1 | 1 | 220 | 1 | 206 | 2.50E-101 | 378.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77282.t1 | Q9FKC0 | 76.4 | 220 | 38 | 1 | 1 | 220 | 1 | 206 | 1.3e-90 | 334.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77282.t1 | B7FGF9 | 89.1 | 220 | 10 | 1 | 1 | 220 | 1 | 206 | 1.8e-101 | 378.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene77282 | 0.839969 | 1.15E-57 | -1.69E-46 |
| MS.gene050290 | MS.gene77282 | 0.869715 | 2.51E-66 | -1.69E-46 |
| MS.gene050320 | MS.gene77282 | 0.830487 | 2.86E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene77282 | 0.848827 | 4.78E-60 | -1.69E-46 |
| MS.gene050916 | MS.gene77282 | 0.832822 | 7.59E-56 | -1.69E-46 |
| MS.gene051063 | MS.gene77282 | 0.830856 | 2.32E-55 | -1.69E-46 |
| MS.gene051330 | MS.gene77282 | 0.844455 | 7.48E-59 | -1.69E-46 |
| MS.gene051677 | MS.gene77282 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene77282 | 0.898405 | 5.48E-77 | -1.69E-46 |
| MS.gene051748 | MS.gene77282 | 0.876098 | 1.83E-68 | -1.69E-46 |
| MS.gene051756 | MS.gene77282 | 0.815128 | 1.08E-51 | -1.69E-46 |
| MS.gene051850 | MS.gene77282 | 0.878907 | 1.92E-69 | -1.69E-46 |
| MS.gene051903 | MS.gene77282 | 0.893671 | 5.06E-75 | -1.69E-46 |
| MS.gene052947 | MS.gene77282 | 0.874661 | 5.67E-68 | -1.69E-46 |
| MS.gene053109 | MS.gene77282 | 0.845927 | 2.99E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene77282 | 0.854827 | 9.50E-62 | -1.69E-46 |
| MS.gene054937 | MS.gene77282 | 0.905068 | 6.34E-80 | -1.69E-46 |
| MS.gene055424 | MS.gene77282 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene056075 | MS.gene77282 | 0.876908 | 9.60E-69 | -1.69E-46 |
| MS.gene056601 | MS.gene77282 | 0.803072 | 4.15E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene77282 | 0.852571 | 4.23E-61 | -1.69E-46 |
| MS.gene056917 | MS.gene77282 | 0.835322 | 1.79E-56 | -1.69E-46 |
| MS.gene057092 | MS.gene77282 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene77282 | 0.89174 | 3.02E-74 | -1.69E-46 |
| MS.gene057234 | MS.gene77282 | 0.824147 | 9.45E-54 | -1.69E-46 |
| MS.gene058354 | MS.gene77282 | 0.821278 | 4.40E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene77282 | 0.824779 | 6.71E-54 | -1.69E-46 |
| MS.gene059227 | MS.gene77282 | 0.814142 | 1.79E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene77282 | 0.833686 | 4.62E-56 | -1.69E-46 |
| MS.gene059898 | MS.gene77282 | 0.83265 | 8.38E-56 | -1.69E-46 |
| MS.gene06001 | MS.gene77282 | 0.901692 | 2.07E-78 | -1.69E-46 |
| MS.gene06011 | MS.gene77282 | 0.833117 | 6.41E-56 | -1.69E-46 |
| MS.gene060763 | MS.gene77282 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene061145 | MS.gene77282 | 0.839505 | 1.52E-57 | -1.69E-46 |
| MS.gene06118 | MS.gene77282 | 0.804442 | 2.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77282.t1 | MTR_7g057770 | 89.091 | 220 | 10 | 1 | 1 | 220 | 1 | 206 | 6.72e-140 | 390 |
| MS.gene77282.t1 | MTR_1g023590 | 84.545 | 220 | 20 | 1 | 1 | 220 | 1 | 206 | 3.38e-131 | 368 |
| MS.gene77282.t1 | MTR_5g083790 | 80.909 | 220 | 28 | 1 | 1 | 220 | 1 | 206 | 5.66e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77282.t1 | AT5G48760 | 76.364 | 220 | 38 | 1 | 1 | 220 | 1 | 206 | 3.46e-121 | 342 |
| MS.gene77282.t1 | AT5G48760 | 76.364 | 220 | 38 | 1 | 1 | 220 | 1 | 206 | 3.46e-121 | 342 |
| MS.gene77282.t1 | AT4G13170 | 74.545 | 220 | 42 | 1 | 1 | 220 | 1 | 206 | 4.96e-119 | 337 |
| MS.gene77282.t1 | AT3G07110 | 74.545 | 220 | 42 | 1 | 1 | 220 | 1 | 206 | 7.52e-119 | 337 |
| MS.gene77282.t1 | AT3G24830 | 73.182 | 220 | 45 | 1 | 1 | 220 | 1 | 206 | 1.83e-117 | 333 |
| MS.gene77282.t1 | AT3G07110 | 74.208 | 221 | 42 | 2 | 1 | 220 | 1 | 207 | 4.59e-117 | 332 |
Find 58 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCCTCTGGTGGTCTTGTT+AGG | 0.322378 | 7.2:-36467628 | MS.gene77282:CDS |
| TGAAGTATATGAGATTTCTT+AGG | 0.358557 | 7.2:-36467598 | MS.gene77282:CDS |
| AACAAAATAACTCACCTTGA+TGG | 0.377070 | 7.2:+36466406 | None:intergenic |
| GATGCAAGGCACCACATGTT+AGG | 0.408002 | 7.2:-36467725 | MS.gene77282:CDS |
| CTGGGAGCCCTAAAATGAAT+AGG | 0.417019 | 7.2:+36467545 | None:intergenic |
| TAGGGTGTTGAGGCTTCAAA+AGG | 0.434306 | 7.2:-36466489 | MS.gene77282:CDS |
| AAATACTACTCAGTACTTAA+CGG | 0.437826 | 7.2:+36466177 | None:intergenic |
| GTGGAGAGGCGGCACTTGCC+AGG | 0.444845 | 7.2:-36466663 | MS.gene77282:CDS |
| CTCCATATGACAAAATTAAG+AGG | 0.448931 | 7.2:-36466615 | MS.gene77282:CDS |
| TGCCAGGATGAAGGTGTATG+AGG | 0.452984 | 7.2:-36466647 | MS.gene77282:CDS |
| AATACTACTCAGTACTTAAC+GGG | 0.453354 | 7.2:+36466178 | None:intergenic |
| CGGGAGCAAGAATTTCAAGT+TGG | 0.456903 | 7.2:+36466197 | None:intergenic |
| GGGAGCAAGAATTTCAAGTT+GGG | 0.464166 | 7.2:+36466198 | None:intergenic |
| ATATGAGATTTCTTAGGAAG+AGG | 0.471394 | 7.2:-36467592 | MS.gene77282:CDS |
| AGAAGCAGATCAATAAATTG+AGG | 0.485847 | 7.2:-36466258 | MS.gene77282:CDS |
| AATACTTACTTAAGAGCATC+GGG | 0.507877 | 7.2:+36466583 | None:intergenic |
| GGCGGCACTTGCCAGGATGA+AGG | 0.510750 | 7.2:-36466656 | MS.gene77282:CDS |
| AATTGTCCGCAGAGGTTGGA+TGG | 0.512881 | 7.2:-36466442 | MS.gene77282:CDS |
| GGACACAAATACTGCACCCT+TGG | 0.514031 | 7.2:-36466467 | MS.gene77282:CDS |
| TCTCCACGCTTTGTCTTGTG+TGG | 0.517762 | 7.2:+36466679 | None:intergenic |
| TGGAGACAAAGAGGAAGGAA+AGG | 0.523797 | 7.2:-36466303 | MS.gene77282:CDS |
| GAAGCAGATCAATAAATTGA+GGG | 0.524740 | 7.2:-36466257 | MS.gene77282:CDS |
| CAATACTTACTTAAGAGCAT+CGG | 0.537113 | 7.2:+36466582 | None:intergenic |
| TGTGAAGAGATTTGTGCCTC+TGG | 0.539971 | 7.2:-36467641 | MS.gene77282:CDS |
| GGACAATTGTCCGCAGAGGT+TGG | 0.541294 | 7.2:-36466446 | MS.gene77282:CDS |
| GTTGCAAAGGAGCTTCTCAA+TGG | 0.552197 | 7.2:-36467686 | MS.gene77282:CDS |
| ATAACTCACCTTGATGGTGC+CGG | 0.561236 | 7.2:+36466412 | None:intergenic |
| ACCCTCATACACCTTCATCC+TGG | 0.561860 | 7.2:+36466645 | None:intergenic |
| TGGTTGAAATTAGGGTGTTG+AGG | 0.577187 | 7.2:-36466499 | MS.gene77282:intron |
| GAACTACGCCGGCACCATCA+AGG | 0.577844 | 7.2:-36466420 | MS.gene77282:intron |
| CAAGACAAAGCGTGGAGAGG+CGG | 0.579684 | 7.2:-36466674 | MS.gene77282:CDS |
| AACAGGAGCTGGAGACAAAG+AGG | 0.580730 | 7.2:-36466312 | MS.gene77282:intron |
| ACTTGCCTCCATCGTTGCAA+AGG | 0.580774 | 7.2:-36467699 | MS.gene77282:CDS |
| GAGAAGCTCCTTTGCAACGA+TGG | 0.584142 | 7.2:+36467691 | None:intergenic |
| ATGAACACGAAGCCTTCTCA+TGG | 0.584461 | 7.2:-36467569 | MS.gene77282:CDS |
| ATATGACAAAATTAAGAGGA+TGG | 0.585968 | 7.2:-36466611 | MS.gene77282:CDS |
| GCCAGGATGAAGGTGTATGA+GGG | 0.597406 | 7.2:-36466646 | MS.gene77282:CDS |
| GGAGACAAAGAGGAAGGAAA+GGG | 0.597942 | 7.2:-36466302 | MS.gene77282:CDS |
| GGAGCTTCTCAATGGTCAGA+AGG | 0.600116 | 7.2:-36467678 | MS.gene77282:CDS |
| GAAGAGATTTGTGCCTCTGG+TGG | 0.604132 | 7.2:-36467638 | MS.gene77282:CDS |
| AGGTATCTGCGCAAAGAGGG+TGG | 0.610561 | 7.2:-36467753 | MS.gene77282:CDS |
| TTCAGGTATCTGCGCAAAGA+GGG | 0.610853 | 7.2:-36467756 | MS.gene77282:CDS |
| CCTCTGCGGACAATTGTCCA+AGG | 0.611851 | 7.2:+36466450 | None:intergenic |
| AGGGTGTTGAGGCTTCAAAA+GGG | 0.617854 | 7.2:-36466488 | MS.gene77282:CDS |
| AGAGGGTGGTGATCGATGCA+AGG | 0.618099 | 7.2:-36467739 | MS.gene77282:CDS |
| GGAGCTGGAGACAAAGAGGA+AGG | 0.618380 | 7.2:-36466308 | MS.gene77282:CDS |
| GTTCAGGTATCTGCGCAAAG+AGG | 0.631106 | 7.2:-36467757 | MS.gene77282:CDS |
| ATTCCACACAAGACAAAGCG+TGG | 0.632644 | 7.2:-36466682 | MS.gene77282:CDS |
| CTCTGCGGACAATTGTCCAA+GGG | 0.634253 | 7.2:+36466451 | None:intergenic |
| AAGCTCCTTTGCAACGATGG+AGG | 0.638563 | 7.2:+36467694 | None:intergenic |
| GGAGCAAGAATTTCAAGTTG+GGG | 0.639957 | 7.2:+36466199 | None:intergenic |
| CTGCCTAACAAGACCACCAG+AGG | 0.642989 | 7.2:+36467625 | None:intergenic |
| AAATGAATAGGACCATGAGA+AGG | 0.655070 | 7.2:+36467557 | None:intergenic |
| ACACAAGACAAAGCGTGGAG+AGG | 0.661685 | 7.2:-36466677 | MS.gene77282:CDS |
| CCTTGGACAATTGTCCGCAG+AGG | 0.672294 | 7.2:-36466450 | MS.gene77282:CDS |
| GAGGTTGGATGGAACTACGC+CGG | 0.675697 | 7.2:-36466431 | MS.gene77282:CDS |
| AGGCAAGTCTACCTAACATG+TGG | 0.695141 | 7.2:+36467714 | None:intergenic |
| GTAGTTCCATCCAACCTCTG+CGG | 0.754715 | 7.2:+36466436 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGAATTTTTATTGAAT+TGG | - | chr7.2:36467412-36467431 | MS.gene77282:intron | 10.0% |
| !! | TATTGTTTAATGTTTGTAAT+TGG | - | chr7.2:36466654-36466673 | MS.gene77282:CDS | 15.0% |
| !! | TTTAATGTTTGTAATTGGTT+TGG | - | chr7.2:36466659-36466678 | MS.gene77282:CDS | 20.0% |
| !!! | TAGTTTTATGTGTTGTTTTT+TGG | - | chr7.2:36466786-36466805 | MS.gene77282:intron | 20.0% |
| !!! | TTAATTTTTCTCTTGTTAAC+AGG | - | chr7.2:36467624-36467643 | MS.gene77282:CDS | 20.0% |
| !!! | TTTTTGTTAAATCGCATTTT+CGG | - | chr7.2:36466492-36466511 | MS.gene77282:intron | 20.0% |
| ! | ATATGACAAAATTAAGAGGA+TGG | - | chr7.2:36467342-36467361 | MS.gene77282:intron | 25.0% |
| ! | TGAAGTATATGAGATTTCTT+AGG | - | chr7.2:36466355-36466374 | MS.gene77282:intron | 25.0% |
| ! | TTGATTATTGTGTTCTTTGT+TGG | - | chr7.2:36466975-36466994 | MS.gene77282:intron | 25.0% |
| !! | ACTGCATTTTTGATATTACT+AGG | - | chr7.2:36466545-36466564 | MS.gene77282:intron | 25.0% |
| !! | ATCCTCTTAATTTTGTCATA+TGG | + | chr7.2:36467343-36467362 | None:intergenic | 25.0% |
| !! | GTGTTGTTGAATATTGTATT+TGG | - | chr7.2:36466896-36466915 | MS.gene77282:CDS | 25.0% |
| !! | GTGTTGTTGATTATTGTATT+TGG | - | chr7.2:36466823-36466842 | MS.gene77282:intron | 25.0% |
| !! | TTGTTTAAGGATAGTTGTTT+TGG | - | chr7.2:36466700-36466719 | MS.gene77282:intron | 25.0% |
| !!! | AGAAATGTTGTGTTGTTTTT+TGG | - | chr7.2:36466859-36466878 | MS.gene77282:CDS | 25.0% |
| !!! | TGTTTAAGGATAGTTGTTTT+GGG | - | chr7.2:36466701-36466720 | MS.gene77282:intron | 25.0% |
| !!! | TTTTAACGTGGATTTGTTTA+AGG | - | chr7.2:36466687-36466706 | MS.gene77282:CDS | 25.0% |
| !!! | TTTTTGAGTAGTAATGTTGT+TGG | - | chr7.2:36467054-36467073 | MS.gene77282:intron | 25.0% |
| AACAAAATAACTCACCTTGA+TGG | + | chr7.2:36467550-36467569 | None:intergenic | 30.0% | |
| AGAAGCAGATCAATAAATTG+AGG | - | chr7.2:36467695-36467714 | MS.gene77282:CDS | 30.0% | |
| ATATGAGATTTCTTAGGAAG+AGG | - | chr7.2:36466361-36466380 | MS.gene77282:intron | 30.0% | |
| ATTATTGTGTTCTTTGTTGG+AGG | - | chr7.2:36466978-36466997 | MS.gene77282:intron | 30.0% | |
| CTCCATATGACAAAATTAAG+AGG | - | chr7.2:36467338-36467357 | MS.gene77282:intron | 30.0% | |
| GAAGCAGATCAATAAATTGA+GGG | - | chr7.2:36467696-36467715 | MS.gene77282:CDS | 30.0% | |
| GAATTTGAATACTGAATGAG+TGG | - | chr7.2:36467434-36467453 | MS.gene77282:intron | 30.0% | |
| TGAATGAGTGGTTGAAATTA+GGG | - | chr7.2:36467446-36467465 | MS.gene77282:intron | 30.0% | |
| TTATTGTGTTCTTTGTTGGA+GGG | - | chr7.2:36466979-36466998 | MS.gene77282:intron | 30.0% | |
| ! | CAATACTTACTTAAGAGCAT+CGG | + | chr7.2:36467374-36467393 | None:intergenic | 30.0% |
| ! | CTCTTAATTTTGTCATATGG+AGG | + | chr7.2:36467340-36467359 | None:intergenic | 30.0% |
| ! | TCATGGTCCTATTCATTTTA+GGG | - | chr7.2:36466401-36466420 | MS.gene77282:intron | 30.0% |
| ! | TTAATTTTGTCATATGGAGG+TGG | + | chr7.2:36467337-36467356 | None:intergenic | 30.0% |
| ! | TTTTGTGGATGATTTTTGAC+AGG | - | chr7.2:36467097-36467116 | MS.gene77282:intron | 30.0% |
| !! | AATACTTACTTAAGAGCATC+GGG | + | chr7.2:36467373-36467392 | None:intergenic | 30.0% |
| !! | TGAGTGATGTGTTATTGTTT+TGG | - | chr7.2:36467211-36467230 | MS.gene77282:intron | 30.0% |
| !!! | AGAAATGTTGTGCTGTTTTT+TGG | - | chr7.2:36466932-36466951 | MS.gene77282:intron | 30.0% |
| !!! | GGTTTGGTTATTTTTTAACG+TGG | - | chr7.2:36466675-36466694 | MS.gene77282:CDS | 30.0% |
| !!! | TATTACTGGGTTGTTGTTTT+TGG | - | chr7.2:36466516-36466535 | MS.gene77282:intron | 30.0% |
| AAATGAATAGGACCATGAGA+AGG | + | chr7.2:36466399-36466418 | None:intergenic | 35.0% | |
| CTGAATGAGTGGTTGAAATT+AGG | - | chr7.2:36467445-36467464 | MS.gene77282:intron | 35.0% | |
| ! | ATCGCATTTTCGGATATTAC+TGG | - | chr7.2:36466502-36466521 | MS.gene77282:intron | 35.0% |
| ! | CTCATGGTCCTATTCATTTT+AGG | - | chr7.2:36466400-36466419 | MS.gene77282:intron | 35.0% |
| ! | TCGCATTTTCGGATATTACT+GGG | - | chr7.2:36466503-36466522 | MS.gene77282:intron | 35.0% |
| !! | TTGAGTGTTGTGTTCTTTTG+TGG | - | chr7.2:36467082-36467101 | MS.gene77282:intron | 35.0% |
| !!! | AGTGTTGTGTTGTTTTTAGG+AGG | - | chr7.2:36467030-36467049 | MS.gene77282:intron | 35.0% |
| !!! | GTGAGTGTTGTGTTGTTTTT+AGG | - | chr7.2:36467027-36467046 | MS.gene77282:intron | 35.0% |
| !!! | GTGTTGTGTTGTTTTTAGGA+GGG | - | chr7.2:36467031-36467050 | MS.gene77282:intron | 35.0% |
| !!! | TTAAGGATAGTTGTTTTGGG+AGG | - | chr7.2:36466704-36466723 | MS.gene77282:intron | 35.0% |
| AGTACGCCAAAAGATCTTAC+TGG | + | chr7.2:36466430-36466449 | None:intergenic | 40.0% | |
| GTACGCCAAAAGATCTTACT+GGG | + | chr7.2:36466429-36466448 | None:intergenic | 40.0% | |
| TTTCTCTTGTTAACAGGAGC+TGG | - | chr7.2:36467630-36467649 | MS.gene77282:CDS | 40.0% | |
| !! | GGAGCAAGAATTTCAAGTTG+GGG | + | chr7.2:36467757-36467776 | None:intergenic | 40.0% |
| !! | GGGAGCAAGAATTTCAAGTT+GGG | + | chr7.2:36467758-36467777 | None:intergenic | 40.0% |
| !! | TGGTTGAAATTAGGGTGTTG+AGG | - | chr7.2:36467454-36467473 | MS.gene77282:intron | 40.0% |
| !! | TTGAGTGTCGTGTTCTCTTT+TGG | - | chr7.2:36467161-36467180 | MS.gene77282:intron | 40.0% |
| AGGCAAGTCTACCTAACATG+TGG | + | chr7.2:36466242-36466261 | None:intergenic | 45.0% | |
| ATGAACACGAAGCCTTCTCA+TGG | - | chr7.2:36466384-36466403 | MS.gene77282:intron | 45.0% | |
| ATTCCACACAAGACAAAGCG+TGG | - | chr7.2:36467271-36467290 | MS.gene77282:intron | 45.0% | |
| CTGGGAGCCCTAAAATGAAT+AGG | + | chr7.2:36466411-36466430 | None:intergenic | 45.0% | |
| GGAGACAAAGAGGAAGGAAA+GGG | - | chr7.2:36467651-36467670 | MS.gene77282:CDS | 45.0% | |
| GTTGCAAAGGAGCTTCTCAA+TGG | - | chr7.2:36466267-36466286 | MS.gene77282:CDS | 45.0% | |
| TGGAGACAAAGAGGAAGGAA+AGG | - | chr7.2:36467650-36467669 | MS.gene77282:CDS | 45.0% | |
| TGTGAAGAGATTTGTGCCTC+TGG | - | chr7.2:36466312-36466331 | MS.gene77282:intron | 45.0% | |
| TTCAGGTATCTGCGCAAAGA+GGG | - | chr7.2:36466197-36466216 | MS.gene77282:CDS | 45.0% | |
| ! | ATCTTTTGGCGTACTGTTCG+TGG | - | chr7.2:36466435-36466454 | MS.gene77282:CDS | 45.0% |
| ! | CGGGAGCAAGAATTTCAAGT+TGG | + | chr7.2:36467759-36467778 | None:intergenic | 45.0% |
| ! | TCTTTTGGCGTACTGTTCGT+GGG | - | chr7.2:36466436-36466455 | MS.gene77282:CDS | 45.0% |
| !! | AGGGTGTTGAGGCTTCAAAA+GGG | - | chr7.2:36467465-36467484 | MS.gene77282:intron | 45.0% |
| !! | ATAACTCACCTTGATGGTGC+CGG | + | chr7.2:36467544-36467563 | None:intergenic | 45.0% |
| !! | TAGGGTGTTGAGGCTTCAAA+AGG | - | chr7.2:36467464-36467483 | MS.gene77282:intron | 45.0% |
| AACAGGAGCTGGAGACAAAG+AGG | - | chr7.2:36467641-36467660 | MS.gene77282:CDS | 50.0% | |
| AAGCTCCTTTGCAACGATGG+AGG | + | chr7.2:36466262-36466281 | None:intergenic | 50.0% | |
| AATTGTCCGCAGAGGTTGGA+TGG | - | chr7.2:36467511-36467530 | MS.gene77282:intron | 50.0% | |
| ACACAAGACAAAGCGTGGAG+AGG | - | chr7.2:36467276-36467295 | MS.gene77282:intron | 50.0% | |
| ACCCTCATACACCTTCATCC+TGG | + | chr7.2:36467311-36467330 | None:intergenic | 50.0% | |
| ACTTGCCTCCATCGTTGCAA+AGG | - | chr7.2:36466254-36466273 | MS.gene77282:CDS | 50.0% | |
| CTCTGCGGACAATTGTCCAA+GGG | + | chr7.2:36467505-36467524 | None:intergenic | 50.0% | |
| GAAGAGATTTGTGCCTCTGG+TGG | - | chr7.2:36466315-36466334 | MS.gene77282:intron | 50.0% | |
| GAGAAGCTCCTTTGCAACGA+TGG | + | chr7.2:36466265-36466284 | None:intergenic | 50.0% | |
| GGACACAAATACTGCACCCT+TGG | - | chr7.2:36467486-36467505 | MS.gene77282:intron | 50.0% | |
| GGAGCTTCTCAATGGTCAGA+AGG | - | chr7.2:36466275-36466294 | MS.gene77282:CDS | 50.0% | |
| GTAGTTCCATCCAACCTCTG+CGG | + | chr7.2:36467520-36467539 | None:intergenic | 50.0% | |
| GTTCAGGTATCTGCGCAAAG+AGG | - | chr7.2:36466196-36466215 | MS.gene77282:CDS | 50.0% | |
| TCTCCACGCTTTGTCTTGTG+TGG | + | chr7.2:36467277-36467296 | None:intergenic | 50.0% | |
| ! | GATGCAAGGCACCACATGTT+AGG | - | chr7.2:36466228-36466247 | MS.gene77282:CDS | 50.0% |
| ! | GCCAGGATGAAGGTGTATGA+GGG | - | chr7.2:36467307-36467326 | MS.gene77282:intron | 50.0% |
| ! | GGGCTCCCAGTAAGATCTTT+TGG | - | chr7.2:36466421-36466440 | MS.gene77282:CDS | 50.0% |
| ! | TGCCAGGATGAAGGTGTATG+AGG | - | chr7.2:36467306-36467325 | MS.gene77282:intron | 50.0% |
| AGAGGGTGGTGATCGATGCA+AGG | - | chr7.2:36466214-36466233 | MS.gene77282:CDS | 55.0% | |
| AGGTATCTGCGCAAAGAGGG+TGG | - | chr7.2:36466200-36466219 | MS.gene77282:CDS | 55.0% | |
| CAAGACAAAGCGTGGAGAGG+CGG | - | chr7.2:36467279-36467298 | MS.gene77282:intron | 55.0% | |
| CCTCTGCGGACAATTGTCCA+AGG | + | chr7.2:36467506-36467525 | None:intergenic | 55.0% | |
| CCTTGGACAATTGTCCGCAG+AGG | - | chr7.2:36467503-36467522 | MS.gene77282:intron | 55.0% | |
| CTGCCTAACAAGACCACCAG+AGG | + | chr7.2:36466331-36466350 | None:intergenic | 55.0% | |
| GAGGTTGGATGGAACTACGC+CGG | - | chr7.2:36467522-36467541 | MS.gene77282:intron | 55.0% | |
| GGACAATTGTCCGCAGAGGT+TGG | - | chr7.2:36467507-36467526 | MS.gene77282:intron | 55.0% | |
| GGAGCTGGAGACAAAGAGGA+AGG | - | chr7.2:36467645-36467664 | MS.gene77282:CDS | 55.0% | |
| !! | GTGCCTCTGGTGGTCTTGTT+AGG | - | chr7.2:36466325-36466344 | MS.gene77282:intron | 55.0% |
| GAACTACGCCGGCACCATCA+AGG | - | chr7.2:36467533-36467552 | MS.gene77282:intron | 60.0% | |
| GGCGGCACTTGCCAGGATGA+AGG | - | chr7.2:36467297-36467316 | MS.gene77282:intron | 65.0% | |
| GTGGAGAGGCGGCACTTGCC+AGG | - | chr7.2:36467290-36467309 | MS.gene77282:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 36466186 | 36467789 | 36466186 | ID=MS.gene77282 |
| chr7.2 | mRNA | 36466186 | 36467789 | 36466186 | ID=MS.gene77282.t1;Parent=MS.gene77282 |
| chr7.2 | exon | 36467546 | 36467789 | 36467546 | ID=MS.gene77282.t1.exon1;Parent=MS.gene77282.t1 |
| chr7.2 | CDS | 36467546 | 36467789 | 36467546 | ID=cds.MS.gene77282.t1;Parent=MS.gene77282.t1 |
| chr7.2 | exon | 36466857 | 36466926 | 36466857 | ID=MS.gene77282.t1.exon2;Parent=MS.gene77282.t1 |
| chr7.2 | CDS | 36466857 | 36466926 | 36466857 | ID=cds.MS.gene77282.t1;Parent=MS.gene77282.t1 |
| chr7.2 | exon | 36466592 | 36466708 | 36466592 | ID=MS.gene77282.t1.exon3;Parent=MS.gene77282.t1 |
| chr7.2 | CDS | 36466592 | 36466708 | 36466592 | ID=cds.MS.gene77282.t1;Parent=MS.gene77282.t1 |
| chr7.2 | exon | 36466421 | 36466508 | 36466421 | ID=MS.gene77282.t1.exon4;Parent=MS.gene77282.t1 |
| chr7.2 | CDS | 36466421 | 36466508 | 36466421 | ID=cds.MS.gene77282.t1;Parent=MS.gene77282.t1 |
| chr7.2 | exon | 36466186 | 36466329 | 36466186 | ID=MS.gene77282.t1.exon5;Parent=MS.gene77282.t1 |
| chr7.2 | CDS | 36466186 | 36466329 | 36466186 | ID=cds.MS.gene77282.t1;Parent=MS.gene77282.t1 |
| Gene Sequence |
| Protein sequence |
