Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77371.t1 | XP_013449168.1 | 49.7 | 145 | 0 | 1 | 1 | 145 | 1 | 72 | 4.60E-19 | 104.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77371.t1 | A0A072UBG8 | 49.7 | 145 | 0 | 1 | 1 | 145 | 1 | 72 | 3.3e-19 | 104.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene77371 | 0.844098 | 9.33E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene77371 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene77371 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene050953 | MS.gene77371 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene77371 | 0.80764 | 4.58E-50 | -1.69E-46 |
| MS.gene051574 | MS.gene77371 | 0.805214 | 1.49E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene77371 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene77371 | 0.800242 | 1.58E-48 | -1.69E-46 |
| MS.gene052586 | MS.gene77371 | 0.809473 | 1.86E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene77371 | 0.800787 | 1.22E-48 | -1.69E-46 |
| MS.gene052954 | MS.gene77371 | 0.837738 | 4.35E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene77371 | 0.824328 | 8.57E-54 | -1.69E-46 |
| MS.gene05308 | MS.gene77371 | 0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene77371 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene77371 | 0.809455 | 1.88E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene77371 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene77371 | 0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene77371 | 0.807415 | 5.11E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene77371 | 0.816594 | 5.10E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene77371 | 0.808732 | 2.68E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene77371 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene77371 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene77371 | 0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene77371 | 0.836885 | 7.20E-57 | -1.69E-46 |
| MS.gene056776 | MS.gene77371 | 0.805676 | 1.19E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene77371 | 0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene77371 | 0.820891 | 5.40E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene77371 | 0.842409 | 2.63E-58 | -1.69E-46 |
| MS.gene057444 | MS.gene77371 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene77371 | 0.827304 | 1.68E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene77371 | 0.801578 | 8.43E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene77371 | 0.834948 | 2.23E-56 | -1.69E-46 |
| MS.gene059382 | MS.gene77371 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene77371 | 0.838069 | 3.58E-57 | -1.69E-46 |
| MS.gene060879 | MS.gene77371 | 0.832847 | 7.48E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene77371 | 0.801257 | 9.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77371.t1 | MTR_7g068940 | 92.593 | 54 | 3 | 1 | 92 | 145 | 20 | 72 | 3.11e-27 | 97.1 |
| MS.gene77371.t1 | MTR_7g068940 | 100.000 | 25 | 0 | 0 | 1 | 25 | 1 | 25 | 1.31e-11 | 57.0 |
| MS.gene77371.t1 | MTR_7g068940 | 100.000 | 25 | 0 | 0 | 1 | 25 | 1 | 25 | 4.55e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 32 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAGGACATCAAAGAATA+TGG | 0.394875 | 7.1:-32974752 | MS.gene77371:CDS |
| CTGTTATAGGTATCAATCTT+AGG | 0.396118 | 7.1:-32976220 | MS.gene77371:intron |
| AAGACTTGCGAGAAGTGGTT+GGG | 0.409643 | 7.1:+32976413 | None:intergenic |
| TCAGCAGACCCTCCGCTGGC+TGG | 0.430530 | 7.1:-32976363 | MS.gene77371:CDS |
| GTCGTCAGCAGACCCTCCGC+TGG | 0.463356 | 7.1:-32976367 | MS.gene77371:CDS |
| CTGACGACAAACACGAGGCT+TGG | 0.469174 | 7.1:+32976382 | None:intergenic |
| ATTCAACAGGTTCAAAGTAA+AGG | 0.470120 | 7.1:+32976441 | None:intergenic |
| CACGGGTTGCCAGCCAGCGG+AGG | 0.473284 | 7.1:+32976354 | None:intergenic |
| ACTGCAAACCTTTGAAATGC+AGG | 0.473412 | 7.1:+32974772 | None:intergenic |
| CTCTTACTTTGTCAATGAAG+TGG | 0.484729 | 7.1:-32977408 | MS.gene77371:CDS |
| GTCAATGAAGTGGTTGTCAA+TGG | 0.500920 | 7.1:-32977398 | MS.gene77371:CDS |
| TTGTCAATGGTCTTGCCAAT+AGG | 0.506277 | 7.1:-32977385 | MS.gene77371:intron |
| TTCGCAGCCCTGCATTTCAA+AGG | 0.518336 | 7.1:-32974780 | MS.gene77371:intron |
| GACGCAAGACTTGCGAGAAG+TGG | 0.532142 | 7.1:+32976408 | None:intergenic |
| CTTCTCGCAAGTCTTGCGTC+TGG | 0.534208 | 7.1:-32976405 | MS.gene77371:CDS |
| CAAGACTTGCGAGAAGTGGT+TGG | 0.539988 | 7.1:+32976412 | None:intergenic |
| CTGCAAACCTTTGAAATGCA+GGG | 0.553942 | 7.1:+32974773 | None:intergenic |
| AGACTTGCGAGAAGTGGTTG+GGG | 0.554995 | 7.1:+32976414 | None:intergenic |
| ATACACGTATTAACAGAAAG+TGG | 0.557735 | 7.1:+32976317 | None:intergenic |
| ACGGGTTGCCAGCCAGCGGA+GGG | 0.558339 | 7.1:+32976355 | None:intergenic |
| CAAATGAAAAGAATCACTGC+TGG | 0.583676 | 7.1:+32974482 | None:intergenic |
| CAACAGGTTCAAAGTAAAGG+TGG | 0.584784 | 7.1:+32976444 | None:intergenic |
| CATTTCAAAGGTTTGCAGTG+AGG | 0.594381 | 7.1:-32974768 | MS.gene77371:CDS |
| AGAGTTAGCTGAGCAGCTGA+AGG | 0.595641 | 7.1:-32974621 | MS.gene77371:CDS |
| GACTTGCGAGAAGTGGTTGG+GGG | 0.607002 | 7.1:+32976415 | None:intergenic |
| TACACGTATTAACAGAAAGT+GGG | 0.640814 | 7.1:+32976318 | None:intergenic |
| TGGGTGAAACACATCAGCAC+GGG | 0.641283 | 7.1:+32976337 | None:intergenic |
| CAGCACGGGTTGCCAGCCAG+CGG | 0.642785 | 7.1:+32976351 | None:intergenic |
| GTCTGCTGACGACAAACACG+AGG | 0.653388 | 7.1:+32976377 | None:intergenic |
| GTGGGTGAAACACATCAGCA+CGG | 0.659362 | 7.1:+32976336 | None:intergenic |
| CATGCTAAGACACTGTCATG+TGG | 0.744223 | 7.1:-32977005 | MS.gene77371:CDS |
| GCTAAGACACTGTCATGTGG+TGG | 0.754700 | 7.1:-32977002 | MS.gene77371:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGTATTTCAAAATTA+AGG | + | chr7.1:32974883-32974902 | None:intergenic | 10.0% |
| !!! | AATATTTTCTATTTTAAGAT+AGG | - | chr7.1:32976710-32976729 | MS.gene77371:intron | 10.0% |
| !! | GATCATAAATACAATTATTA+GGG | + | chr7.1:32976921-32976940 | None:intergenic | 15.0% |
| !! | TGATCATAAATACAATTATT+AGG | + | chr7.1:32976922-32976941 | None:intergenic | 15.0% |
| !! | TGCTGTATTAATAATTATAT+TGG | + | chr7.1:32975000-32975019 | None:intergenic | 15.0% |
| !!! | CATTTTTTAATTACAGAATT+AGG | - | chr7.1:32974896-32974915 | MS.gene77371:intron | 15.0% |
| !! | AATTGAAACAATCATATAAC+TGG | + | chr7.1:32974653-32974672 | None:intergenic | 20.0% |
| !! | ATAATTATTAATACAGCAGA+GGG | - | chr7.1:32975002-32975021 | MS.gene77371:intron | 20.0% |
| !! | ATGGAAGAAATTTCAAAAAA+GGG | - | chr7.1:32977202-32977221 | MS.gene77371:intron | 20.0% |
| !! | GAAAAAAAAAAATCACCTAT+TGG | + | chr7.1:32974568-32974587 | None:intergenic | 20.0% |
| !! | GTCATTATTGATAAGTTTAT+AGG | - | chr7.1:32975803-32975822 | MS.gene77371:intron | 20.0% |
| !! | TATAATTATTAATACAGCAG+AGG | - | chr7.1:32975001-32975020 | MS.gene77371:intron | 20.0% |
| !! | TATGGAAGAAATTTCAAAAA+AGG | - | chr7.1:32977201-32977220 | MS.gene77371:intron | 20.0% |
| !! | TTTAGAAAAATTAAGGTACA+CGG | - | chr7.1:32975104-32975123 | MS.gene77371:intron | 20.0% |
| !!! | CTTTGTAACAATTATTTTCA+TGG | + | chr7.1:32976512-32976531 | None:intergenic | 20.0% |
| !!! | TTATTGTTGTTCTTAAATTC+TGG | + | chr7.1:32976015-32976034 | None:intergenic | 20.0% |
| ! | AAACTTGTAAAATCTGTTGT+GGG | + | chr7.1:32976153-32976172 | None:intergenic | 25.0% |
| ! | AAGGAAGAATATGAAAAAGA+AGG | + | chr7.1:32976269-32976288 | None:intergenic | 25.0% |
| ! | ACAATTATTAGGGAGAAAAT+TGG | + | chr7.1:32976911-32976930 | None:intergenic | 25.0% |
| ! | AGAAGTTGGATATCTTATTA+TGG | - | chr7.1:32975979-32975998 | MS.gene77371:intron | 25.0% |
| ! | AGAGTTATATAGGAATGTTT+AGG | + | chr7.1:32976192-32976211 | None:intergenic | 25.0% |
| ! | ATATCTTATTATGGGTGTTA+GGG | - | chr7.1:32975988-32976007 | MS.gene77371:intron | 25.0% |
| ! | ATGAATCAAAATTCAGAACA+CGG | + | chr7.1:32975653-32975672 | None:intergenic | 25.0% |
| ! | CAATTATTAGGGAGAAAATT+GGG | + | chr7.1:32976910-32976929 | None:intergenic | 25.0% |
| ! | GAAGTTGGATATCTTATTAT+GGG | - | chr7.1:32975980-32975999 | MS.gene77371:intron | 25.0% |
| ! | TAATTATTAATACAGCAGAG+GGG | - | chr7.1:32975003-32975022 | MS.gene77371:intron | 25.0% |
| ! | TTAGAAAAATTAAGGTACAC+GGG | - | chr7.1:32975105-32975124 | MS.gene77371:intron | 25.0% |
| ! | TTCAAAAGAATGAATCTGAT+TGG | - | chr7.1:32976360-32976379 | MS.gene77371:CDS | 25.0% |
| !! | AAAATGATTTTAAGCCTGTA+AGG | - | chr7.1:32975869-32975888 | MS.gene77371:intron | 25.0% |
| !! | AATTATATTGGTTGCAATAG+TGG | + | chr7.1:32974988-32975007 | None:intergenic | 25.0% |
| !! | CAAAGATGAGAATTTTACAT+GGG | + | chr7.1:32976970-32976989 | None:intergenic | 25.0% |
| !! | TTTACAGTTTTTGCTACAAT+AGG | - | chr7.1:32976879-32976898 | MS.gene77371:intron | 25.0% |
| !!! | CGGCAATTTTAGAAAAATTA+AGG | - | chr7.1:32975097-32975116 | MS.gene77371:intron | 25.0% |
| !!! | GTTTGACTTTTGTTTTATTC+TGG | - | chr7.1:32977272-32977291 | MS.gene77371:intron | 25.0% |
| !!! | TGTATTACCTCCATTTTTTT+CGG | + | chr7.1:32977345-32977364 | None:intergenic | 25.0% |
| !!! | TTTTTGAGATTGTGATTGTA+AGG | - | chr7.1:32974622-32974641 | MS.gene77371:CDS | 25.0% |
| AAAAGACAACAGAAAGAAGT+TGG | - | chr7.1:32975965-32975984 | MS.gene77371:intron | 30.0% | |
| AACTAAAACCTATGTTGCAT+AGG | - | chr7.1:32975029-32975048 | MS.gene77371:intron | 30.0% | |
| AATTCAAAAGCAGGAAAACT+TGG | + | chr7.1:32977038-32977057 | None:intergenic | 30.0% | |
| AGACCAAATTAGAGTAGTTT+AGG | - | chr7.1:32976620-32976639 | MS.gene77371:intron | 30.0% | |
| AGGATATGATTTCAAATCCT+TGG | + | chr7.1:32975438-32975457 | None:intergenic | 30.0% | |
| ATACACGTATTAACAGAAAG+TGG | + | chr7.1:32975621-32975640 | None:intergenic | 30.0% | |
| ATATGATTTCAAATCCTTGG+GGG | + | chr7.1:32975435-32975454 | None:intergenic | 30.0% | |
| ATGAAAAATAGCTGAACACT+AGG | - | chr7.1:32976067-32976086 | MS.gene77371:intron | 30.0% | |
| ATTCAACAGGTTCAAAGTAA+AGG | + | chr7.1:32975497-32975516 | None:intergenic | 30.0% | |
| ATTGTTTCAATTGAGAGAGA+GGG | - | chr7.1:32974661-32974680 | MS.gene77371:intron | 30.0% | |
| CAAAATTAAGGTGAACGTTA+TGG | + | chr7.1:32974871-32974890 | None:intergenic | 30.0% | |
| CTCTAAGTTCACATTCTTAT+TGG | - | chr7.1:32976993-32977012 | MS.gene77371:intron | 30.0% | |
| CTGTTATAGGTATCAATCTT+AGG | - | chr7.1:32975715-32975734 | MS.gene77371:intron | 30.0% | |
| CTTCAAAGCACAATGAAAAT+TGG | + | chr7.1:32976602-32976621 | None:intergenic | 30.0% | |
| GAAACTTGTAAAATCTGTTG+TGG | + | chr7.1:32976154-32976173 | None:intergenic | 30.0% | |
| GATATCTTATTATGGGTGTT+AGG | - | chr7.1:32975987-32976006 | MS.gene77371:intron | 30.0% | |
| GATATGATTTCAAATCCTTG+GGG | + | chr7.1:32975436-32975455 | None:intergenic | 30.0% | |
| GGATATGATTTCAAATCCTT+GGG | + | chr7.1:32975437-32975456 | None:intergenic | 30.0% | |
| GTTGTTATCTTTGTATAGCT+AGG | + | chr7.1:32975472-32975491 | None:intergenic | 30.0% | |
| TACACGTATTAACAGAAAGT+GGG | + | chr7.1:32975620-32975639 | None:intergenic | 30.0% | |
| TAGGTATCAATCTTAGGTAA+TGG | - | chr7.1:32975721-32975740 | MS.gene77371:intron | 30.0% | |
| TATATAGGAATGTTTAGGAG+AGG | + | chr7.1:32976187-32976206 | None:intergenic | 30.0% | |
| TATTGACCATGTGAACAAAT+CGG | - | chr7.1:32977250-32977269 | MS.gene77371:intron | 30.0% | |
| TCCACCAAAATCTAAGAAAT+CGG | + | chr7.1:32974706-32974725 | None:intergenic | 30.0% | |
| TCCTTAGATAATTCAAAAGC+AGG | + | chr7.1:32977047-32977066 | None:intergenic | 30.0% | |
| TGAAAAATAGCTGAACACTA+GGG | - | chr7.1:32976068-32976087 | MS.gene77371:intron | 30.0% | |
| TGACTGAAAGAGAGTTATAT+AGG | + | chr7.1:32976202-32976221 | None:intergenic | 30.0% | |
| TTAGAAATCAGAACACACAT+AGG | - | chr7.1:32975921-32975940 | MS.gene77371:intron | 30.0% | |
| ! | AGAATTTTACATGGGATGAA+TGG | + | chr7.1:32976962-32976981 | None:intergenic | 30.0% |
| ! | ATAGGACGTTTTTCTCTTAA+TGG | - | chr7.1:32976728-32976747 | MS.gene77371:intron | 30.0% |
| ! | CACATTCTTATTGGCTATTA+AGG | - | chr7.1:32977002-32977021 | MS.gene77371:intron | 30.0% |
| ! | GCAAAGATGAGAATTTTACA+TGG | + | chr7.1:32976971-32976990 | None:intergenic | 30.0% |
| ! | TCAATCTTAGGTAATGGTAT+TGG | - | chr7.1:32975727-32975746 | MS.gene77371:intron | 30.0% |
| ! | TTGATGATTGGTGTGAAAAA+TGG | - | chr7.1:32974831-32974850 | MS.gene77371:intron | 30.0% |
| !! | AAACATCAGTAGTTGATGAT+TGG | - | chr7.1:32974819-32974838 | MS.gene77371:intron | 30.0% |
| !! | TCCTGCTTTTGAATTATCTA+AGG | - | chr7.1:32977043-32977062 | MS.gene77371:intron | 30.0% |
| AAACCTATGTTGCATAGGTA+CGG | - | chr7.1:32975034-32975053 | MS.gene77371:intron | 35.0% | |
| AAAGACGGTTGATCATATGA+AGG | + | chr7.1:32976805-32976824 | None:intergenic | 35.0% | |
| ACCAAAATCTAAGAAATCGG+AGG | + | chr7.1:32974703-32974722 | None:intergenic | 35.0% | |
| AGTCCAATAGTTAGAGATAG+AGG | + | chr7.1:32976780-32976799 | None:intergenic | 35.0% | |
| AGTGAGGACATCAAAGAATA+TGG | - | chr7.1:32977183-32977202 | MS.gene77371:intron | 35.0% | |
| CCTAATATGGGTTCAAATGT+AGG | + | chr7.1:32976316-32976335 | None:intergenic | 35.0% | |
| CCTACATTTGAACCCATATT+AGG | - | chr7.1:32976313-32976332 | MS.gene77371:intron | 35.0% | |
| CTCTTACTTTGTCAATGAAG+TGG | - | chr7.1:32974527-32974546 | MS.gene77371:intron | 35.0% | |
| GAGCCTAAACTACTCTAATT+TGG | + | chr7.1:32976626-32976645 | None:intergenic | 35.0% | |
| GATTGTTTCAATTGAGAGAG+AGG | - | chr7.1:32974660-32974679 | MS.gene77371:intron | 35.0% | |
| GTCCAATAGTTAGAGATAGA+GGG | + | chr7.1:32976779-32976798 | None:intergenic | 35.0% | |
| GTGTGTTCTGATTTCTAACT+TGG | + | chr7.1:32975919-32975938 | None:intergenic | 35.0% | |
| TAAAATCTGTTGTGGGAACA+GGG | + | chr7.1:32976146-32976165 | None:intergenic | 35.0% | |
| TCAGTTTCTTTAAGCCTTAC+AGG | + | chr7.1:32975886-32975905 | None:intergenic | 35.0% | |
| TCTTTGTATAGCTAGGAAGT+AGG | + | chr7.1:32975465-32975484 | None:intergenic | 35.0% | |
| TGATACCTATAACAGTCACA+GGG | + | chr7.1:32975710-32975729 | None:intergenic | 35.0% | |
| TTGATACCTATAACAGTCAC+AGG | + | chr7.1:32975711-32975730 | None:intergenic | 35.0% | |
| ! | AAACTGTAAAGTGCCATCTT+AGG | + | chr7.1:32976869-32976888 | None:intergenic | 35.0% |
| ! | GTGAGAGCATAGACAATAAT+AGG | - | chr7.1:32976570-32976589 | MS.gene77371:intron | 35.0% |
| ! | TCCGATTTCTTAGATTTTGG+TGG | - | chr7.1:32974702-32974721 | MS.gene77371:intron | 35.0% |
| !! | AATGAATCTGATTGGTTCTG+TGG | - | chr7.1:32976368-32976387 | MS.gene77371:CDS | 35.0% |
| !! | AGTAGTTTAGGCTCTAAACT+AGG | - | chr7.1:32976632-32976651 | MS.gene77371:intron | 35.0% |
| !!! | ATTTTGATTCATGCCTCTGT+TGG | - | chr7.1:32975661-32975680 | MS.gene77371:intron | 35.0% |
| !!! | GGTTTTAGTCTCTAAAGCAT+GGG | + | chr7.1:32975406-32975425 | None:intergenic | 35.0% |
| !!! | TGGAGGCAATTTTTTGCATA+GGG | - | chr7.1:32974500-32974519 | MS.gene77371:intron | 35.0% |
| !!! | TTACCTCCATTTTTTTCGGA+AGG | + | chr7.1:32977341-32977360 | None:intergenic | 35.0% |
| AACCTATGTTGCATAGGTAC+GGG | - | chr7.1:32975035-32975054 | MS.gene77371:intron | 40.0% | |
| AACGTTAACACGAGAAGTGA+TGG | + | chr7.1:32977125-32977144 | None:intergenic | 40.0% | |
| ACGATCATGTGAATCTAACG+AGG | + | chr7.1:32974785-32974804 | None:intergenic | 40.0% | |
| ACTAGGTGGAATAGGCTTTA+TGG | - | chr7.1:32976675-32976694 | MS.gene77371:intron | 40.0% | |
| AGTGCACAAGATAAGAAGGA+AGG | + | chr7.1:32976444-32976463 | None:intergenic | 40.0% | |
| ATAGCTAGGAAGTAGGAACA+AGG | + | chr7.1:32975458-32975477 | None:intergenic | 40.0% | |
| ATGTGTGGAAGGTTTGCATA+AGG | + | chr7.1:32976288-32976307 | None:intergenic | 40.0% | |
| CAACAGGTTCAAAGTAAAGG+TGG | + | chr7.1:32975494-32975513 | None:intergenic | 40.0% | |
| CAGGGTAATAAGTTCTCTCA+AGG | + | chr7.1:32976128-32976147 | None:intergenic | 40.0% | |
| CATAGAACCAGATGCAAAGA+CGG | + | chr7.1:32976820-32976839 | None:intergenic | 40.0% | |
| CATTTCAAAGGTTTGCAGTG+AGG | - | chr7.1:32977167-32977186 | MS.gene77371:intron | 40.0% | |
| CTATTCCACCTAGTAGGATA+AGG | + | chr7.1:32976669-32976688 | None:intergenic | 40.0% | |
| CTCCCTCTATCTCTAACTAT+TGG | - | chr7.1:32976774-32976793 | MS.gene77371:intron | 40.0% | |
| CTCGTGTTAACGTTTCATTG+TGG | - | chr7.1:32977131-32977150 | MS.gene77371:intron | 40.0% | |
| CTTATCCTACTAGGTGGAAT+AGG | - | chr7.1:32976667-32976686 | MS.gene77371:intron | 40.0% | |
| GAAGGACCTTCCGAAAAAAA+TGG | - | chr7.1:32977332-32977351 | MS.gene77371:intron | 40.0% | |
| GATACCTATAACAGTCACAG+GGG | + | chr7.1:32975709-32975728 | None:intergenic | 40.0% | |
| GTAAAATCTGTTGTGGGAAC+AGG | + | chr7.1:32976147-32976166 | None:intergenic | 40.0% | |
| GTATGGTACCTGGTAAGATA+CGG | - | chr7.1:32975057-32975076 | MS.gene77371:intron | 40.0% | |
| GTCAATGAAGTGGTTGTCAA+TGG | - | chr7.1:32974537-32974556 | MS.gene77371:intron | 40.0% | |
| GTGATGGTAATAAGCACACA+AGG | + | chr7.1:32977109-32977128 | None:intergenic | 40.0% | |
| TAAAGCCTATTCCACCTAGT+AGG | + | chr7.1:32976675-32976694 | None:intergenic | 40.0% | |
| TAAGCCAGAGGTCCTAATAT+GGG | + | chr7.1:32976328-32976347 | None:intergenic | 40.0% | |
| TATGGTACCTGGTAAGATAC+GGG | - | chr7.1:32975058-32975077 | MS.gene77371:intron | 40.0% | |
| TCAAATCCTTGGGGGAATAT+GGG | + | chr7.1:32975427-32975446 | None:intergenic | 40.0% | |
| TTCAAATCCTTGGGGGAATA+TGG | + | chr7.1:32975428-32975447 | None:intergenic | 40.0% | |
| ! | AATAACAGAGCATCCAACAG+AGG | + | chr7.1:32975677-32975696 | None:intergenic | 40.0% |
| ! | AGCATTGCTCTGTGTCATTA+AGG | + | chr7.1:32976105-32976124 | None:intergenic | 40.0% |
| ! | ATTGGCTATTAAGGTGCTCA+TGG | - | chr7.1:32977011-32977030 | MS.gene77371:CDS | 40.0% |
| ! | CAACTAAGCCTTATCCTACT+AGG | - | chr7.1:32976658-32976677 | MS.gene77371:intron | 40.0% |
| ! | GAACACACATAGGAAAGCAT+AGG | - | chr7.1:32975931-32975950 | MS.gene77371:intron | 40.0% |
| ! | GCCTCCGATTTCTTAGATTT+TGG | - | chr7.1:32974699-32974718 | MS.gene77371:intron | 40.0% |
| ! | TGAGAGTGCACAAGATAAGA+AGG | + | chr7.1:32976448-32976467 | None:intergenic | 40.0% |
| ! | TTGGCTATTAAGGTGCTCAT+GGG | - | chr7.1:32977012-32977031 | MS.gene77371:CDS | 40.0% |
| ! | TTGTCAATGGTCTTGCCAAT+AGG | - | chr7.1:32974550-32974569 | MS.gene77371:intron | 40.0% |
| ! | TTTTCCCCTGTGACTGTTAT+AGG | - | chr7.1:32975702-32975721 | MS.gene77371:intron | 40.0% |
| !! | ACTGCAAACCTTTGAAATGC+AGG | + | chr7.1:32977166-32977185 | None:intergenic | 40.0% |
| !! | CTGCAAACCTTTGAAATGCA+GGG | + | chr7.1:32977165-32977184 | None:intergenic | 40.0% |
| !! | GTCAAACCGATTTGTTCACA+TGG | + | chr7.1:32977259-32977278 | None:intergenic | 40.0% |
| !! | GTCTTTGCATCTGGTTCTAT+GGG | - | chr7.1:32976819-32976838 | MS.gene77371:intron | 40.0% |
| !!! | CTGGAGGCAATTTTTTGCAT+AGG | - | chr7.1:32974499-32974518 | MS.gene77371:intron | 40.0% |
| !!! | GGGTTTTAGTCTCTAAAGCA+TGG | + | chr7.1:32975407-32975426 | None:intergenic | 40.0% |
| AAGACTTGCGAGAAGTGGTT+GGG | + | chr7.1:32975525-32975544 | None:intergenic | 45.0% | |
| AAGTGCCATCTTAGGTGGTT+CGG | + | chr7.1:32976861-32976880 | None:intergenic | 45.0% | |
| ACCTGGTAAGATACGGGTAT+CGG | - | chr7.1:32975064-32975083 | MS.gene77371:intron | 45.0% | |
| ATGCAAACCTTCCACACATC+CGG | - | chr7.1:32976289-32976308 | MS.gene77371:intron | 45.0% | |
| ATGTTGCATAGGTACGGGTA+TGG | - | chr7.1:32975040-32975059 | MS.gene77371:intron | 45.0% | |
| CATGCTAAGACACTGTCATG+TGG | - | chr7.1:32974930-32974949 | MS.gene77371:intron | 45.0% | |
| CTAAAACCCATATTCCCCCA+AGG | - | chr7.1:32975418-32975437 | MS.gene77371:intron | 45.0% | |
| GGACCTTCCGAAAAAAATGG+AGG | - | chr7.1:32977335-32977354 | MS.gene77371:intron | 45.0% | |
| GTAAGCCAGAGGTCCTAATA+TGG | + | chr7.1:32976329-32976348 | None:intergenic | 45.0% | |
| TAACGATGAAGAACCCGTAC+CGG | + | chr7.1:32975375-32975394 | None:intergenic | 45.0% | |
| TACCCGTACCTATGCAACAT+AGG | + | chr7.1:32975040-32975059 | None:intergenic | 45.0% | |
| TATGGGTTCAAATGTAGGCC+CGG | + | chr7.1:32976311-32976330 | None:intergenic | 45.0% | |
| TGAACCCATATTAGGACCTC+TGG | - | chr7.1:32976321-32976340 | MS.gene77371:CDS | 45.0% | |
| TGATCAACCGTCTTTGCATC+TGG | - | chr7.1:32976810-32976829 | MS.gene77371:intron | 45.0% | |
| ! | ACCTCTGGCTTACAAGTAGA+TGG | - | chr7.1:32976336-32976355 | MS.gene77371:CDS | 45.0% |
| ! | CAGTCATGTGCTGCTCAATT+TGG | - | chr7.1:32976216-32976235 | MS.gene77371:intron | 45.0% |
| ! | CCTCTGGCTTACAAGTAGAT+GGG | - | chr7.1:32976337-32976356 | MS.gene77371:CDS | 45.0% |
| ! | CTAAGCCTTATCCTACTAGG+TGG | - | chr7.1:32976661-32976680 | MS.gene77371:intron | 45.0% |
| ! | CTGTAAAGTGCCATCTTAGG+TGG | + | chr7.1:32976866-32976885 | None:intergenic | 45.0% |
| ! | GAAAAAGAAGGAGCGTGATG+AGG | + | chr7.1:32976257-32976276 | None:intergenic | 45.0% |
| !! | CGGGTATCGGTATGAGAATA+CGG | - | chr7.1:32975077-32975096 | MS.gene77371:intron | 45.0% |
| !! | CGTCTTTGCATCTGGTTCTA+TGG | - | chr7.1:32976818-32976837 | MS.gene77371:intron | 45.0% |
| AACGATGAAGAACCCGTACC+GGG | + | chr7.1:32975374-32975393 | None:intergenic | 50.0% | |
| ACCGATACCCGTATCTTACC+AGG | + | chr7.1:32975068-32975087 | None:intergenic | 50.0% | |
| AGACTTGCGAGAAGTGGTTG+GGG | + | chr7.1:32975524-32975543 | None:intergenic | 50.0% | |
| AGAGTTAGCTGAGCAGCTGA+AGG | - | chr7.1:32977314-32977333 | MS.gene77371:intron | 50.0% | |
| ATAGGTACGGGTATGGTACC+TGG | - | chr7.1:32975047-32975066 | MS.gene77371:intron | 50.0% | |
| CAAGACTTGCGAGAAGTGGT+TGG | + | chr7.1:32975526-32975545 | None:intergenic | 50.0% | |
| CACTGTCATGTGGTGGTTTG+TGG | - | chr7.1:32974940-32974959 | MS.gene77371:intron | 50.0% | |
| CATGTCCGAACCACCTAAGA+TGG | - | chr7.1:32976853-32976872 | MS.gene77371:intron | 50.0% | |
| CCCATCTACTTGTAAGCCAG+AGG | + | chr7.1:32976340-32976359 | None:intergenic | 50.0% | |
| GCTAAGACACTGTCATGTGG+TGG | - | chr7.1:32974933-32974952 | MS.gene77371:intron | 50.0% | |
| GTGGGTGAAACACATCAGCA+CGG | + | chr7.1:32975602-32975621 | None:intergenic | 50.0% | |
| GTGGTGCAATGCATAAGCTG+TGG | + | chr7.1:32974969-32974988 | None:intergenic | 50.0% | |
| TGCAAACCTTCCACACATCC+GGG | - | chr7.1:32976290-32976309 | MS.gene77371:intron | 50.0% | |
| TGGGTGAAACACATCAGCAC+GGG | + | chr7.1:32975601-32975620 | None:intergenic | 50.0% | |
| TTCGCAGCCCTGCATTTCAA+AGG | - | chr7.1:32977155-32977174 | MS.gene77371:intron | 50.0% | |
| ! | AAAGAAGGAGCGTGATGAGG+TGG | + | chr7.1:32976254-32976273 | None:intergenic | 50.0% |
| ! | TGGTTGGGGGTTGATTCAAC+AGG | + | chr7.1:32975510-32975529 | None:intergenic | 50.0% |
| AGCAGACTGCAGAGGCAGAA+GGG | - | chr7.1:32976393-32976412 | MS.gene77371:CDS | 55.0% | |
| CAAATGTAGGCCCGGATGTG+TGG | + | chr7.1:32976303-32976322 | None:intergenic | 55.0% | |
| CTGACGACAAACACGAGGCT+TGG | + | chr7.1:32975556-32975575 | None:intergenic | 55.0% | |
| CTTCTCGCAAGTCTTGCGTC+TGG | - | chr7.1:32975530-32975549 | MS.gene77371:intron | 55.0% | |
| GACGCAAGACTTGCGAGAAG+TGG | + | chr7.1:32975530-32975549 | None:intergenic | 55.0% | |
| GACTTGCGAGAAGTGGTTGG+GGG | + | chr7.1:32975523-32975542 | None:intergenic | 55.0% | |
| GTCTGCTGACGACAAACACG+AGG | + | chr7.1:32975561-32975580 | None:intergenic | 55.0% | |
| ! | AGGCAGAAGGGCATGGCAAT+TGG | - | chr7.1:32976405-32976424 | MS.gene77371:CDS | 55.0% |
| ACTGCAGAGGCAGAAGGGCA+TGG | - | chr7.1:32976398-32976417 | MS.gene77371:CDS | 60.0% | |
| CAGCAGACTGCAGAGGCAGA+AGG | - | chr7.1:32976392-32976411 | MS.gene77371:CDS | 60.0% | |
| CTTCTGCCTCTGCAGTCTGC+TGG | + | chr7.1:32976394-32976413 | None:intergenic | 60.0% | |
| GAGCGTGATGAGGTGGCAAG+GGG | + | chr7.1:32976247-32976266 | None:intergenic | 60.0% | |
| GGAGCGTGATGAGGTGGCAA+GGG | + | chr7.1:32976248-32976267 | None:intergenic | 60.0% | |
| TACCGTACGCGTACCCGGTA+CGG | - | chr7.1:32975358-32975377 | MS.gene77371:intron | 60.0% | |
| TGTAGGCCCGGATGTGTGGA+AGG | + | chr7.1:32976299-32976318 | None:intergenic | 60.0% | |
| ! | ACGAGTACCGTACGCGTACC+CGG | - | chr7.1:32975353-32975372 | MS.gene77371:intron | 60.0% |
| ! | AGGAGCGTGATGAGGTGGCA+AGG | + | chr7.1:32976249-32976268 | None:intergenic | 60.0% |
| ACCCGTACCGGGTACGCGTA+CGG | + | chr7.1:32975363-32975382 | None:intergenic | 65.0% | |
| ACCGTACGCGTACCCGGTAC+GGG | - | chr7.1:32975359-32975378 | MS.gene77371:intron | 65.0% | |
| CTGTGGCCAGCAGACTGCAG+AGG | - | chr7.1:32976385-32976404 | MS.gene77371:CDS | 65.0% | |
| GGGTACGCGTACGGTACTCG+TGG | + | chr7.1:32975354-32975373 | None:intergenic | 65.0% | |
| GTCGTCAGCAGACCCTCCGC+TGG | - | chr7.1:32975568-32975587 | MS.gene77371:intron | 70.0% | |
| TCAGCAGACCCTCCGCTGGC+TGG | - | chr7.1:32975572-32975591 | MS.gene77371:intron | 70.0% | |
| ! | ACGGGTTGCCAGCCAGCGGA+GGG | + | chr7.1:32975583-32975602 | None:intergenic | 70.0% |
| ! | CAGCACGGGTTGCCAGCCAG+CGG | + | chr7.1:32975587-32975606 | None:intergenic | 70.0% |
| ! | CACGGGTTGCCAGCCAGCGG+AGG | + | chr7.1:32975584-32975603 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32974495 | 32977462 | 32974495 | ID=MS.gene77371 |
| chr7.1 | mRNA | 32974495 | 32977462 | 32974495 | ID=MS.gene77371.t1;Parent=MS.gene77371 |
| chr7.1 | exon | 32977386 | 32977462 | 32977386 | ID=MS.gene77371.t1.exon1;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32977386 | 32977462 | 32977386 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32977003 | 32977045 | 32977003 | ID=MS.gene77371.t1.exon2;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32977003 | 32977045 | 32977003 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32976321 | 32976483 | 32976321 | ID=MS.gene77371.t1.exon3;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32976321 | 32976483 | 32976321 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32976221 | 32976233 | 32976221 | ID=MS.gene77371.t1.exon4;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32976221 | 32976233 | 32976221 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32974734 | 32974795 | 32974734 | ID=MS.gene77371.t1.exon5;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32974734 | 32974795 | 32974734 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32974601 | 32974659 | 32974601 | ID=MS.gene77371.t1.exon6;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32974601 | 32974659 | 32974601 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| chr7.1 | exon | 32974495 | 32974515 | 32974495 | ID=MS.gene77371.t1.exon7;Parent=MS.gene77371.t1 |
| chr7.1 | CDS | 32974495 | 32974515 | 32974495 | ID=cds.MS.gene77371.t1;Parent=MS.gene77371.t1 |
| Gene Sequence |
| Protein sequence |
