Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79024.t1 | XP_013450811.1 | 96.5 | 430 | 15 | 0 | 2 | 431 | 40 | 469 | 2.10E-240 | 841.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79024.t1 | B0G107 | 38.3 | 405 | 237 | 6 | 1 | 404 | 96 | 488 | 2.2e-78 | 294.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79024.t1 | A0A072U697 | 96.5 | 430 | 15 | 0 | 2 | 431 | 40 | 469 | 1.5e-240 | 841.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene79024 | 0.803246 | 3.82E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene79024 | 0.811646 | 6.31E-51 | -1.69E-46 |
| MS.gene05016 | MS.gene79024 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene79024 | 0.80975 | 1.62E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene79024 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene79024 | 0.817643 | 2.97E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene79024 | 0.830822 | 2.36E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene79024 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene79024 | 0.800961 | 1.13E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene79024 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene79024 | 0.818026 | 2.43E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene79024 | 0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene79024 | 0.818861 | 1.57E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene79024 | 0.830733 | 2.49E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene79024 | 0.838535 | 2.71E-57 | -1.69E-46 |
| MS.gene053166 | MS.gene79024 | 0.834006 | 3.85E-56 | -1.69E-46 |
| MS.gene053176 | MS.gene79024 | 0.806701 | 7.24E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene79024 | 0.822644 | 2.12E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene79024 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene79024 | -0.803498 | 3.39E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene79024 | 0.804102 | 2.54E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene79024 | 0.861416 | 1.04E-63 | -1.69E-46 |
| MS.gene054559 | MS.gene79024 | 0.840708 | 7.39E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene79024 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene79024 | 0.860758 | 1.65E-63 | -1.69E-46 |
| MS.gene055358 | MS.gene79024 | 0.841728 | 3.99E-58 | -1.69E-46 |
| MS.gene055367 | MS.gene79024 | 0.828803 | 7.34E-55 | -1.69E-46 |
| MS.gene055453 | MS.gene79024 | -0.818127 | 2.31E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene79024 | 0.828346 | 9.46E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene79024 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene79024 | 0.844292 | 8.28E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene79024 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene79024 | 0.81597 | 7.03E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene79024 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene79024 | 0.801722 | 7.87E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene79024 | 0.837913 | 3.93E-57 | -1.69E-46 |
| MS.gene059128 | MS.gene79024 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene059161 | MS.gene79024 | 0.817483 | 3.22E-52 | -1.69E-46 |
| MS.gene059306 | MS.gene79024 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene79024 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene79024 | 0.823955 | 1.05E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene79024 | 0.803553 | 3.30E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene79024 | -0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene79024 | -0.828818 | 7.28E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79024.t1 | MTR_6g007210 | 96.512 | 430 | 15 | 0 | 2 | 431 | 40 | 469 | 0.0 | 839 |
| MS.gene79024.t1 | MTR_5g034420 | 70.023 | 427 | 124 | 2 | 1 | 427 | 41 | 463 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79024.t1 | AT5G40270 | 73.068 | 427 | 115 | 0 | 2 | 428 | 45 | 471 | 0.0 | 687 |
| MS.gene79024.t1 | AT5G40290 | 69.305 | 417 | 120 | 1 | 2 | 418 | 38 | 446 | 0.0 | 622 |
| MS.gene79024.t1 | AT5G40270 | 72.727 | 352 | 96 | 0 | 2 | 353 | 45 | 396 | 0.0 | 563 |
Find 81 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTATCCTTACAGGTTAA+TGG | 0.224934 | 6.2:+2880577 | MS.gene79024:intron |
| CTAATTCATACCTTTACTTT+TGG | 0.232143 | 6.2:-2880797 | None:intergenic |
| GACTGTCGAGCTTGTGGTCT+GGG | 0.290979 | 6.2:+2880437 | MS.gene79024:CDS |
| CTTGGAGTGTATTGGATTGC+TGG | 0.293833 | 6.2:+2879000 | MS.gene79024:CDS |
| CACTTGGCAGGAAATGATAT+TGG | 0.305846 | 6.2:+2880080 | MS.gene79024:intron |
| TGCTGTTCCAAAGGATATAA+TGG | 0.344410 | 6.2:+2881323 | MS.gene79024:CDS |
| AAATTGTCCATTATATCCTT+TGG | 0.347909 | 6.2:-2881330 | None:intergenic |
| TGAACAAATGTCGGTCAAAA+TGG | 0.351315 | 6.2:+2879564 | MS.gene79024:CDS |
| TCCAAGAGAATGCTCAAATC+TGG | 0.360135 | 6.2:-2878983 | None:intergenic |
| TCTCTAGCTTCCTTCAGTTC+TGG | 0.362099 | 6.2:-2881147 | None:intergenic |
| AGCATTCTCTTGGAGTGTAT+TGG | 0.362528 | 6.2:+2878992 | MS.gene79024:CDS |
| AAATGGTTGATTATATAGTT+GGG | 0.364892 | 6.2:+2879581 | MS.gene79024:CDS |
| TGACTGTCGAGCTTGTGGTC+TGG | 0.371354 | 6.2:+2880436 | MS.gene79024:CDS |
| AAAATGGTTGATTATATAGT+TGG | 0.373584 | 6.2:+2879580 | MS.gene79024:CDS |
| TAACGGCGTTTCTTCTTCTC+TGG | 0.378555 | 6.2:-2882349 | None:intergenic |
| TTCAAGATCCTGGTGAATAC+TGG | 0.381538 | 6.2:+2880981 | MS.gene79024:CDS |
| TCGAAGGCGGGATCTCTATC+AGG | 0.384744 | 6.2:+2881185 | MS.gene79024:CDS |
| TCCAGATTTGAGCATTCTCT+TGG | 0.396374 | 6.2:+2878982 | MS.gene79024:CDS |
| TACCCTAGGTAGAGCAAATT+CGG | 0.403972 | 6.2:-2880109 | None:intergenic |
| CACGTTCATGATAACGTTCA+TGG | 0.404031 | 6.2:+2876392 | None:intergenic |
| AATGGAGACCATGCGGGTCT+TGG | 0.412433 | 6.2:+2880595 | MS.gene79024:CDS |
| TTGTATGATATTGTTGCAAA+TGG | 0.413163 | 6.2:+2880283 | MS.gene79024:CDS |
| ATTCAATCCGTGAAACTTGC+TGG | 0.415551 | 6.2:+2879181 | MS.gene79024:CDS |
| AAGTGGCTTATGCGCTCATC+AGG | 0.425422 | 6.2:-2882099 | None:intergenic |
| TGTGAGGGTCAATATCAATA+TGG | 0.429940 | 6.2:-2879609 | None:intergenic |
| CTTGTCAAGATATGATAGTA+AGG | 0.433285 | 6.2:+2882133 | MS.gene79024:CDS |
| ATTGTTGCAAATGGACGAAA+TGG | 0.434367 | 6.2:+2880292 | MS.gene79024:CDS |
| CTTAGAATCGCTGATAACTC+TGG | 0.439164 | 6.2:-2879349 | None:intergenic |
| TTCACACACTTGGTGTATCC+AGG | 0.452183 | 6.2:+2878949 | MS.gene79024:CDS |
| TCTTCTAGCATTCAAGATCC+TGG | 0.456750 | 6.2:+2880971 | MS.gene79024:CDS |
| ATCTTACAGGGCATGGAGCT+TGG | 0.457393 | 6.2:+2879142 | MS.gene79024:intron |
| CGTTCAAACAAGTGACTGAA+TGG | 0.461182 | 6.2:-2879315 | None:intergenic |
| AGCTTCCTTCAGTTCTGGCA+AGG | 0.465740 | 6.2:-2881142 | None:intergenic |
| ATTTAGAGCTCAAGTGAGAA+AGG | 0.466824 | 6.2:+2880256 | MS.gene79024:intron |
| GATTCTGCGCATTCGAAGGC+GGG | 0.475108 | 6.2:+2881173 | MS.gene79024:CDS |
| TTATATACCAGCAAGTTTCA+CGG | 0.480628 | 6.2:-2879188 | None:intergenic |
| TGTTTCAGGTTTCACACACT+TGG | 0.481088 | 6.2:+2878939 | MS.gene79024:intron |
| GTCAAAATCGATTTGACTCG+TGG | 0.496079 | 6.2:+2881543 | MS.gene79024:CDS |
| TTCTCCCTTGCCAGAACTGA+AGG | 0.506157 | 6.2:+2881137 | MS.gene79024:CDS |
| CTTCGTGAGTTGAAACAACT+TGG | 0.507325 | 6.2:+2876740 | MS.gene79024:CDS |
| AATCTGGAATGGACAGCGCC+TGG | 0.509801 | 6.2:-2878967 | None:intergenic |
| TTCATATTCATGAATTGTAA+CGG | 0.510545 | 6.2:-2882366 | None:intergenic |
| CACGAGTGGCAAACAACTTG+TGG | 0.515439 | 6.2:-2880745 | None:intergenic |
| TCGTGGAAAGCATAATCCTC+TGG | 0.518062 | 6.2:+2881560 | MS.gene79024:CDS |
| TCAGGATATAGTTTGTTCCC+AGG | 0.524472 | 6.2:+2881368 | MS.gene79024:CDS |
| TTCTGCATGATGTGGGACAC+GGG | 0.529435 | 6.2:+2879292 | MS.gene79024:CDS |
| ATCATATCTTGACAAGATGC+AGG | 0.542051 | 6.2:-2882126 | None:intergenic |
| GTTAGGACTTCTGCATGATG+TGG | 0.544815 | 6.2:+2879284 | MS.gene79024:intron |
| GATGCAACTTTGAATTTCAG+AGG | 0.545820 | 6.2:+2880459 | MS.gene79024:CDS |
| TTTCCAGGCAATGGAACTCA+TGG | 0.549430 | 6.2:+2880907 | MS.gene79024:intron |
| GAGAATGCTCAAATCTGGAA+TGG | 0.551432 | 6.2:-2878978 | None:intergenic |
| CAGGTTAATGGAGACCATGC+GGG | 0.552528 | 6.2:+2880589 | MS.gene79024:intron |
| CTCCGAATTTGCTCTACCTA+GGG | 0.559932 | 6.2:+2880107 | MS.gene79024:CDS |
| AATGGTTGATTATATAGTTG+GGG | 0.560037 | 6.2:+2879582 | MS.gene79024:CDS |
| AGTTGATTCTGCGCATTCGA+AGG | 0.562157 | 6.2:+2881169 | MS.gene79024:CDS |
| GAGTTATCAGCGATTCTAAG+TGG | 0.563456 | 6.2:+2879352 | MS.gene79024:CDS |
| TGGTGGAGTTATGTTGAAAG+AGG | 0.563605 | 6.2:+2881500 | MS.gene79024:CDS |
| CTTCTGCATGATGTGGGACA+CGG | 0.565706 | 6.2:+2879291 | MS.gene79024:CDS |
| TGGCAAGGGAGAAGTCTCAA+TGG | 0.570504 | 6.2:-2881127 | None:intergenic |
| GCTTCCTTCAGTTCTGGCAA+GGG | 0.575833 | 6.2:-2881141 | None:intergenic |
| TTAGAATCGCTGATAACTCT+GGG | 0.580721 | 6.2:-2879348 | None:intergenic |
| GACAAGATGCAGGCAACAAG+TGG | 0.582338 | 6.2:-2882116 | None:intergenic |
| GCTCGTGACTGTCGAGCTTG+TGG | 0.587133 | 6.2:+2880431 | MS.gene79024:CDS |
| TTATACGCATCCAAAAGTAA+AGG | 0.591041 | 6.2:+2880787 | MS.gene79024:CDS |
| ATTACCTTCCAGTATTCACC+AGG | 0.596415 | 6.2:-2880989 | None:intergenic |
| AACATATGGAATCAAAGCAC+AGG | 0.604310 | 6.2:+2882315 | MS.gene79024:CDS |
| GCTCCGAATTTGCTCTACCT+AGG | 0.605412 | 6.2:+2880106 | MS.gene79024:CDS |
| TAACGAGTATGCTGTTCCAA+AGG | 0.607057 | 6.2:+2881314 | MS.gene79024:CDS |
| TTTATTGAATACCTTTCCAG+AGG | 0.608230 | 6.2:-2881576 | None:intergenic |
| TGATTCTGCGCATTCGAAGG+CGG | 0.611092 | 6.2:+2881172 | MS.gene79024:CDS |
| TTAGGACTTCTGCATGATGT+GGG | 0.618531 | 6.2:+2879285 | MS.gene79024:intron |
| GAAAGCATAATCCTCTGGAA+AGG | 0.620450 | 6.2:+2881565 | MS.gene79024:CDS |
| AGATCCTGGTGAATACTGGA+AGG | 0.630470 | 6.2:+2880985 | MS.gene79024:CDS |
| TCTATACAGATCGGCACGAG+TGG | 0.634664 | 6.2:-2880759 | None:intergenic |
| CTCGTCATCCAAGACCCGCA+TGG | 0.636946 | 6.2:-2880603 | None:intergenic |
| TAGGTCGCATGAACAAATGT+CGG | 0.639717 | 6.2:+2879555 | MS.gene79024:intron |
| TTGTCAAGATATGATAGTAA+GGG | 0.640152 | 6.2:+2882134 | MS.gene79024:CDS |
| ATAAACTGTTCTATACAGAT+CGG | 0.640246 | 6.2:-2880768 | None:intergenic |
| AGTGGCAAACAACTTGTGGA+TGG | 0.659577 | 6.2:-2880741 | None:intergenic |
| ACAGGTTAATGGAGACCATG+CGG | 0.693561 | 6.2:+2880588 | MS.gene79024:intron |
| TGGGAACAAACTATATCCTG+AGG | 0.706184 | 6.2:-2881366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAAGCTTATAAAT+AGG | - | chr6.2:2881765-2881784 | None:intergenic | 10.0% |
| !! | AAGATTATGAATATTACTAA+AGG | + | chr6.2:2877093-2877112 | MS.gene79024:intron | 15.0% |
| !! | AGATTATGAATATTACTAAA+GGG | + | chr6.2:2877094-2877113 | MS.gene79024:intron | 15.0% |
| !! | AGATTATGATTATTTCAAAA+AGG | - | chr6.2:2876921-2876940 | None:intergenic | 15.0% |
| !! | ATAGAATATTTACATTAACA+TGG | - | chr6.2:2879953-2879972 | None:intergenic | 15.0% |
| !! | ATAGACAATTTAAATACAAA+AGG | - | chr6.2:2880145-2880164 | None:intergenic | 15.0% |
| !! | ATTATTCAATATGTAAATGA+AGG | - | chr6.2:2882039-2882058 | None:intergenic | 15.0% |
| !! | ATTGTAAGTAGTTAAATATA+AGG | + | chr6.2:2877192-2877211 | MS.gene79024:intron | 15.0% |
| !! | TAGAATATTTACATTAACAT+GGG | - | chr6.2:2879952-2879971 | None:intergenic | 15.0% |
| !! | TAGTAATATTCATAATCTTA+AGG | - | chr6.2:2877092-2877111 | None:intergenic | 15.0% |
| !! | TTACATTAGTAAACAATATT+AGG | - | chr6.2:2881651-2881670 | None:intergenic | 15.0% |
| !! | TTCTTTATTGTATACTTATA+TGG | + | chr6.2:2876676-2876695 | MS.gene79024:intron | 15.0% |
| !! | TTGAAATAATCATAATCTTA+AGG | + | chr6.2:2876923-2876942 | MS.gene79024:intron | 15.0% |
| !!! | ATATCTTTTATTCTCTTTTA+CGG | - | chr6.2:2878628-2878647 | None:intergenic | 15.0% |
| !!! | TTATTGTTAGTTAATTTTGA+GGG | + | chr6.2:2878236-2878255 | MS.gene79024:intron | 15.0% |
| !! | AAAATGGTTGATTATATAGT+TGG | + | chr6.2:2879580-2879599 | MS.gene79024:CDS | 20.0% |
| !! | AAATAACTCAATATAGTACA+AGG | - | chr6.2:2878329-2878348 | None:intergenic | 20.0% |
| !! | AAATGGTTGATTATATAGTT+GGG | + | chr6.2:2879581-2879600 | MS.gene79024:CDS | 20.0% |
| !! | AACTTAACTGTATCTTTAAA+AGG | - | chr6.2:2879092-2879111 | None:intergenic | 20.0% |
| !! | AATAACCAACAAGAAAATAA+AGG | - | chr6.2:2880239-2880258 | None:intergenic | 20.0% |
| !! | AATATATTACTTATCGTCTT+TGG | - | chr6.2:2877933-2877952 | None:intergenic | 20.0% |
| !! | AATATGCATATATAATCTCA+TGG | - | chr6.2:2877440-2877459 | None:intergenic | 20.0% |
| !! | AATCTTGATAAAAGATAGAA+AGG | - | chr6.2:2881741-2881760 | None:intergenic | 20.0% |
| !! | AATTATCAGCTAAAAACATA+TGG | + | chr6.2:2882301-2882320 | MS.gene79024:CDS | 20.0% |
| !! | ACATAAAACAAATTGATCTA+TGG | - | chr6.2:2878922-2878941 | None:intergenic | 20.0% |
| !! | AGATTATGAATATCTCAAAT+AGG | - | chr6.2:2877266-2877285 | None:intergenic | 20.0% |
| !! | ATAAAAAACTAACACAAATG+AGG | - | chr6.2:2878393-2878412 | None:intergenic | 20.0% |
| !! | ATATTGAATAATATCTGTTC+AGG | + | chr6.2:2882047-2882066 | MS.gene79024:intron | 20.0% |
| !! | ATTTAGATTTGACATTGAAA+TGG | + | chr6.2:2878414-2878433 | MS.gene79024:intron | 20.0% |
| !! | CAGTTTACTCAATATATATT+CGG | + | chr6.2:2877332-2877351 | MS.gene79024:intron | 20.0% |
| !! | CATAAAACAAATTGATCTAT+GGG | - | chr6.2:2878921-2878940 | None:intergenic | 20.0% |
| !! | TCTTAGTTACATAAAATCAA+AGG | - | chr6.2:2881870-2881889 | None:intergenic | 20.0% |
| !! | TTAAAACTATCTTAATGAGA+GGG | - | chr6.2:2877786-2877805 | None:intergenic | 20.0% |
| !! | TTAAATTCTATTATCCTTAC+AGG | + | chr6.2:2880570-2880589 | MS.gene79024:intron | 20.0% |
| !! | TTTGAAAAATTCATAATCGT+AGG | + | chr6.2:2877539-2877558 | MS.gene79024:intron | 20.0% |
| !!! | AATTATTTTATACTTGCTAC+TGG | + | chr6.2:2882005-2882024 | MS.gene79024:intron | 20.0% |
| !!! | ACTTAACTGTATCTTTAAAA+GGG | - | chr6.2:2879091-2879110 | None:intergenic | 20.0% |
| !!! | AGAAAGTACTATGTTTTATA+TGG | + | chr6.2:2879467-2879486 | MS.gene79024:intron | 20.0% |
| !!! | ATCAATTTGTTTTATGTTTC+AGG | + | chr6.2:2878925-2878944 | MS.gene79024:intron | 20.0% |
| !!! | CGATTATGAATTTTTCAAAA+AGG | - | chr6.2:2877538-2877557 | None:intergenic | 20.0% |
| !!! | CTTATTGTTAGTTAATTTTG+AGG | + | chr6.2:2878235-2878254 | MS.gene79024:intron | 20.0% |
| !!! | GCTTTATATTTTATTGTTGA+TGG | + | chr6.2:2881773-2881792 | MS.gene79024:intron | 20.0% |
| !!! | TAAAAGTATACAATATACAG+AGG | + | chr6.2:2880524-2880543 | MS.gene79024:intron | 20.0% |
| !!! | TAATACCTTTATTTTCTTGT+TGG | + | chr6.2:2880231-2880250 | MS.gene79024:intron | 20.0% |
| !!! | TACAAATTTCTAGACTAATT+TGG | + | chr6.2:2876966-2876985 | MS.gene79024:intron | 20.0% |
| !!! | TACGTGAACAATAATTTTAA+GGG | + | chr6.2:2881907-2881926 | MS.gene79024:intron | 20.0% |
| !!! | TAGTTTTATTGAAACTGAAA+TGG | + | chr6.2:2878705-2878724 | MS.gene79024:intron | 20.0% |
| !!! | TATACTTTTAAGTTATTGCT+AGG | - | chr6.2:2880514-2880533 | None:intergenic | 20.0% |
| !!! | TATATATGATGAACTTGTTT+TGG | + | chr6.2:2876830-2876849 | MS.gene79024:intron | 20.0% |
| !!! | TTAAATTGTTTCTGTTGTAA+TGG | + | chr6.2:2877802-2877821 | MS.gene79024:intron | 20.0% |
| !!! | TTCAACTGTTAAATTTTATG+TGG | - | chr6.2:2880341-2880360 | None:intergenic | 20.0% |
| !!! | TTTAAAACTATCTTAATGAG+AGG | - | chr6.2:2877787-2877806 | None:intergenic | 20.0% |
| ! | AAAACATAGTACTTTCTTTC+AGG | - | chr6.2:2879464-2879483 | None:intergenic | 25.0% |
| ! | AAAGTCAGATATGAATTTAG+TGG | - | chr6.2:2877048-2877067 | None:intergenic | 25.0% |
| ! | AAATTCATATCTGACTTTGT+AGG | + | chr6.2:2877050-2877069 | MS.gene79024:intron | 25.0% |
| ! | AAATTGTCCATTATATCCTT+TGG | - | chr6.2:2881333-2881352 | None:intergenic | 25.0% |
| ! | AACTAACAATAAGTTACCTA+TGG | - | chr6.2:2878228-2878247 | None:intergenic | 25.0% |
| ! | AATGGTTGATTATATAGTTG+GGG | + | chr6.2:2879582-2879601 | MS.gene79024:CDS | 25.0% |
| ! | AATTAAAACCACGAAGTTTA+TGG | - | chr6.2:2880866-2880885 | None:intergenic | 25.0% |
| ! | ACTTCTAAACTTCAAAAGAA+AGG | - | chr6.2:2879816-2879835 | None:intergenic | 25.0% |
| ! | ATAAACTGTTCTATACAGAT+CGG | - | chr6.2:2880771-2880790 | None:intergenic | 25.0% |
| ! | ATTAAAAAGATTAAGGACCT+GGG | - | chr6.2:2881388-2881407 | None:intergenic | 25.0% |
| ! | ATTGTATTAGGCGATTAATT+GGG | + | chr6.2:2881803-2881822 | MS.gene79024:intron | 25.0% |
| ! | ATTTATTGAGGAACCAAATT+GGG | - | chr6.2:2878778-2878797 | None:intergenic | 25.0% |
| ! | CAATATACTTGACATAAAAC+AGG | - | chr6.2:2879681-2879700 | None:intergenic | 25.0% |
| ! | CTTCTTTCTATAACATTACA+AGG | - | chr6.2:2879421-2879440 | None:intergenic | 25.0% |
| ! | GAAATTTGTGTATCTTATGT+AGG | + | chr6.2:2877725-2877744 | MS.gene79024:intron | 25.0% |
| ! | GATGGTGTTTATATTGTATT+AGG | + | chr6.2:2881791-2881810 | MS.gene79024:intron | 25.0% |
| ! | GTATGAATTAGTTGCTTATT+CGG | + | chr6.2:2880809-2880828 | MS.gene79024:intron | 25.0% |
| ! | TAAAAGACAATTGCAAATAG+TGG | - | chr6.2:2879658-2879677 | None:intergenic | 25.0% |
| ! | TAAGATCTAGCAAATTACAA+AGG | - | chr6.2:2880721-2880740 | None:intergenic | 25.0% |
| ! | TACCTACAATATGAATAAAC+CGG | - | chr6.2:2880184-2880203 | None:intergenic | 25.0% |
| ! | TATTCTCAAGAAATATTTGC+CGG | + | chr6.2:2880162-2880181 | MS.gene79024:intron | 25.0% |
| ! | TATTGTATTAGGCGATTAAT+TGG | + | chr6.2:2881802-2881821 | MS.gene79024:intron | 25.0% |
| ! | TATTTATTGAGGAACCAAAT+TGG | - | chr6.2:2878779-2878798 | None:intergenic | 25.0% |
| ! | TTAATCTGTTCATAACGATA+AGG | + | chr6.2:2878809-2878828 | MS.gene79024:intron | 25.0% |
| ! | TTAATTTCATTAGTTCGTGA+TGG | + | chr6.2:2880835-2880854 | MS.gene79024:intron | 25.0% |
| ! | TTGAATTCGATAGTAATGTT+AGG | + | chr6.2:2876893-2876912 | MS.gene79024:intron | 25.0% |
| ! | TTGTATGATATTGTTGCAAA+TGG | + | chr6.2:2880283-2880302 | MS.gene79024:CDS | 25.0% |
| ! | TTGTCAAGATATGATAGTAA+GGG | + | chr6.2:2882134-2882153 | MS.gene79024:CDS | 25.0% |
| ! | TTTACGTGATTCTATGAAAT+GGG | + | chr6.2:2876630-2876649 | MS.gene79024:intron | 25.0% |
| !! | AAATTTCTAGACTAATTTGG+TGG | + | chr6.2:2876969-2876988 | MS.gene79024:intron | 25.0% |
| !! | AATCTTCTGAGAATATGTTA+GGG | + | chr6.2:2877147-2877166 | MS.gene79024:intron | 25.0% |
| !! | ATTATTGCCCTTATTTATTG+AGG | - | chr6.2:2878790-2878809 | None:intergenic | 25.0% |
| !! | ATTTGGTTCCTCAATAAATA+AGG | + | chr6.2:2878779-2878798 | MS.gene79024:intron | 25.0% |
| !! | CATCATAAACATGATGTTTT+AGG | + | chr6.2:2879725-2879744 | MS.gene79024:intron | 25.0% |
| !! | CTAATTCATACCTTTACTTT+TGG | - | chr6.2:2880800-2880819 | None:intergenic | 25.0% |
| !! | GTACGTGAACAATAATTTTA+AGG | + | chr6.2:2881906-2881925 | MS.gene79024:intron | 25.0% |
| !! | TAATCTTCTGAGAATATGTT+AGG | + | chr6.2:2877146-2877165 | MS.gene79024:intron | 25.0% |
| !! | TAATCTTTTCTTATCTCTTC+TGG | + | chr6.2:2881668-2881687 | MS.gene79024:intron | 25.0% |
| !! | TTTGGTTCCTCAATAAATAA+GGG | + | chr6.2:2878780-2878799 | MS.gene79024:intron | 25.0% |
| !! | TTTTTAATCAAGAAGCTACT+GGG | + | chr6.2:2877005-2877024 | MS.gene79024:intron | 25.0% |
| !!! | ACATTGTCATCATTTTTGTT+AGG | + | chr6.2:2879267-2879286 | MS.gene79024:intron | 25.0% |
| !!! | ATTGTGTCTGTATATTTTTG+AGG | + | chr6.2:2878530-2878549 | MS.gene79024:intron | 25.0% |
| !!! | CAAATAGCTATTACTTTTGT+TGG | + | chr6.2:2879976-2879995 | MS.gene79024:intron | 25.0% |
| !!! | CTTTTACTCATATTAGTCTT+TGG | + | chr6.2:2876869-2876888 | MS.gene79024:intron | 25.0% |
| !!! | CTTTTGAAGTTTAGAAGTAT+TGG | + | chr6.2:2879818-2879837 | MS.gene79024:intron | 25.0% |
| !!! | TTTTTTAATCAAGAAGCTAC+TGG | + | chr6.2:2877004-2877023 | MS.gene79024:intron | 25.0% |
| AAAGGAAGTAAGAAGAAACT+TGG | - | chr6.2:2882203-2882222 | None:intergenic | 30.0% | |
| AAGCATGTTGCATATTCTAA+TGG | + | chr6.2:2880045-2880064 | MS.gene79024:intron | 30.0% | |
| AATACTGGAAGGTAATTATG+AGG | + | chr6.2:2880996-2881015 | MS.gene79024:intron | 30.0% | |
| ACCAAACATACATATACACA+TGG | - | chr6.2:2878575-2878594 | None:intergenic | 30.0% | |
| AGATTCGGAAACAAATTTAG+TGG | - | chr6.2:2877396-2877415 | None:intergenic | 30.0% | |
| AGCATGTTGCATATTCTAAT+GGG | + | chr6.2:2880046-2880065 | MS.gene79024:intron | 30.0% | |
| AGCTGATTAAGTTTCTGTTT+CGG | + | chr6.2:2881279-2881298 | MS.gene79024:intron | 30.0% | |
| ATACTGGAAGGTAATTATGA+GGG | + | chr6.2:2880997-2881016 | MS.gene79024:intron | 30.0% | |
| ATAGGTGGAAAAAATTTCAG+AGG | + | chr6.2:2882270-2882289 | MS.gene79024:intron | 30.0% | |
| CACACTATATAAACAATGTG+TGG | + | chr6.2:2879518-2879537 | MS.gene79024:intron | 30.0% | |
| CTATTATCCTTACAGGTTAA+TGG | + | chr6.2:2880577-2880596 | MS.gene79024:intron | 30.0% | |
| CTTGTCAAGATATGATAGTA+AGG | + | chr6.2:2882133-2882152 | MS.gene79024:CDS | 30.0% | |
| CTTTACGTGATTCTATGAAA+TGG | + | chr6.2:2876629-2876648 | MS.gene79024:intron | 30.0% | |
| GAGCAGGATTAAAAAGATTA+AGG | - | chr6.2:2881395-2881414 | None:intergenic | 30.0% | |
| GATTAAAAAGATTAAGGACC+TGG | - | chr6.2:2881389-2881408 | None:intergenic | 30.0% | |
| GCGTATTTAAATTCCATAGT+AGG | - | chr6.2:2877605-2877624 | None:intergenic | 30.0% | |
| GGCAGTATTATTGTACTTAT+TGG | + | chr6.2:2878287-2878306 | MS.gene79024:intron | 30.0% | |
| GGTTGTTACATTACATATGA+TGG | + | chr6.2:2877834-2877853 | MS.gene79024:intron | 30.0% | |
| GTAATAATACATGTCAACAG+TGG | + | chr6.2:2881604-2881623 | MS.gene79024:intron | 30.0% | |
| GTGAAATTTGACAAATTCAG+TGG | - | chr6.2:2877120-2877139 | None:intergenic | 30.0% | |
| TCACATGTTAAAAAGAGTCA+AGG | + | chr6.2:2879627-2879646 | MS.gene79024:CDS | 30.0% | |
| TCCATGTGTATATGTATGTT+TGG | + | chr6.2:2878571-2878590 | MS.gene79024:intron | 30.0% | |
| TGCTGTAATGTAATGATTTG+TGG | + | chr6.2:2880378-2880397 | MS.gene79024:intron | 30.0% | |
| TGTATCTTATGTAGGAACAT+AGG | + | chr6.2:2877733-2877752 | MS.gene79024:intron | 30.0% | |
| TTATACGCATCCAAAAGTAA+AGG | + | chr6.2:2880787-2880806 | MS.gene79024:CDS | 30.0% | |
| TTATATACCAGCAAGTTTCA+CGG | - | chr6.2:2879191-2879210 | None:intergenic | 30.0% | |
| TTTATATTGCTTTCGTGATC+TGG | + | chr6.2:2878084-2878103 | MS.gene79024:intron | 30.0% | |
| TTTATTGAATACCTTTCCAG+AGG | - | chr6.2:2881579-2881598 | None:intergenic | 30.0% | |
| TTTATTGAGGAACCAAATTG+GGG | - | chr6.2:2878777-2878796 | None:intergenic | 30.0% | |
| ! | AAATTTGTTTCCGAATCTGT+AGG | + | chr6.2:2877398-2877417 | MS.gene79024:intron | 30.0% |
| ! | AATTTGTTTCCGAATCTGTA+GGG | + | chr6.2:2877399-2877418 | MS.gene79024:intron | 30.0% |
| ! | ATCTTCTGAGAATATGTTAG+GGG | + | chr6.2:2877148-2877167 | MS.gene79024:intron | 30.0% |
| ! | ATGAATTGTTCTTGTTATGC+TGG | + | chr6.2:2877679-2877698 | MS.gene79024:intron | 30.0% |
| ! | CACAATTTTACATCATGTAG+CGG | - | chr6.2:2878516-2878535 | None:intergenic | 30.0% |
| ! | TAACTTTGAAAAAATGCAGC+TGG | + | chr6.2:2881086-2881105 | MS.gene79024:intron | 30.0% |
| ! | TGACTCTTTTTAACATGTGA+GGG | - | chr6.2:2879627-2879646 | None:intergenic | 30.0% |
| ! | TGTGGTATTTTGTACTTTGT+AGG | + | chr6.2:2879536-2879555 | MS.gene79024:intron | 30.0% |
| ! | TTAATTGGGTGATAATGTCA+AGG | + | chr6.2:2881817-2881836 | MS.gene79024:intron | 30.0% |
| ! | TTAATTTTACTGACCAGTTC+TGG | - | chr6.2:2882174-2882193 | None:intergenic | 30.0% |
| ! | TTGACTCTTTTTAACATGTG+AGG | - | chr6.2:2879628-2879647 | None:intergenic | 30.0% |
| ! | TTTTAATCAAGAAGCTACTG+GGG | + | chr6.2:2877006-2877025 | MS.gene79024:intron | 30.0% |
| ! | TTTTTATCAAGCACCTACTA+TGG | + | chr6.2:2877589-2877608 | MS.gene79024:intron | 30.0% |
| !! | AATAGCTCTGAAATCTGTAT+TGG | + | chr6.2:2877703-2877722 | MS.gene79024:intron | 30.0% |
| !!! | CATGTTTTTTATTCTTGCCA+AGG | + | chr6.2:2881422-2881441 | MS.gene79024:intron | 30.0% |
| !!! | CTGAAATTTTTTCCACCTAT+AGG | - | chr6.2:2882270-2882289 | None:intergenic | 30.0% |
| !!! | TGGACACTTTTTGAAACTTA+CGG | + | chr6.2:2879838-2879857 | MS.gene79024:intron | 30.0% |
| AAAAACATGTGCAAATGAGC+AGG | - | chr6.2:2881411-2881430 | None:intergenic | 35.0% | |
| AACATATGGAATCAAAGCAC+AGG | + | chr6.2:2882315-2882334 | MS.gene79024:CDS | 35.0% | |
| ACCACCATTTGACAGAAAAA+TGG | + | chr6.2:2881480-2881499 | MS.gene79024:intron | 35.0% | |
| ACCATTTGACAGAAAAATGG+TGG | + | chr6.2:2881483-2881502 | MS.gene79024:intron | 35.0% | |
| ATAGGATTGTTCAAGGTACA+AGG | - | chr6.2:2882252-2882271 | None:intergenic | 35.0% | |
| ATCATATCTTGACAAGATGC+AGG | - | chr6.2:2882129-2882148 | None:intergenic | 35.0% | |
| ATCTTTATGTTTCCAGGCAA+TGG | + | chr6.2:2880898-2880917 | MS.gene79024:intron | 35.0% | |
| ATGTTGCATATTCTAATGGG+TGG | + | chr6.2:2880049-2880068 | MS.gene79024:intron | 35.0% | |
| ATTGTTGCAAATGGACGAAA+TGG | + | chr6.2:2880292-2880311 | MS.gene79024:CDS | 35.0% | |
| CAATCACAGTTTCACGAAAT+TGG | - | chr6.2:2878464-2878483 | None:intergenic | 35.0% | |
| CATATGTCTGTGATCTTACA+GGG | + | chr6.2:2879130-2879149 | MS.gene79024:intron | 35.0% | |
| CATCTCATCTTTATGTTTCC+AGG | + | chr6.2:2880892-2880911 | MS.gene79024:intron | 35.0% | |
| CCTAGTCATATACGCTTAAT+GGG | + | chr6.2:2878009-2878028 | MS.gene79024:intron | 35.0% | |
| CTAGCAAATTACAAAGGCAA+AGG | - | chr6.2:2880715-2880734 | None:intergenic | 35.0% | |
| CTGTTGTAATGGTTGAAATC+AGG | + | chr6.2:2877813-2877832 | MS.gene79024:intron | 35.0% | |
| GAAGTAAGAAGAAACTTGGA+TGG | - | chr6.2:2882199-2882218 | None:intergenic | 35.0% | |
| GATGCAACTTTGAATTTCAG+AGG | + | chr6.2:2880459-2880478 | MS.gene79024:CDS | 35.0% | |
| GGACTAATATTTGACAGAGT+CGG | - | chr6.2:2877475-2877494 | None:intergenic | 35.0% | |
| GTAAACCACTAAATTCGTCA+AGG | - | chr6.2:2877567-2877586 | None:intergenic | 35.0% | |
| TAAAGTTCCTTGTTGAACCT+TGG | - | chr6.2:2881442-2881461 | None:intergenic | 35.0% | |
| TATGTTAGGGGCTAAAATAC+AGG | + | chr6.2:2877160-2877179 | MS.gene79024:intron | 35.0% | |
| TCCTAGTCATATACGCTTAA+TGG | + | chr6.2:2878008-2878027 | MS.gene79024:intron | 35.0% | |
| TGAACAAATGTCGGTCAAAA+TGG | + | chr6.2:2879564-2879583 | MS.gene79024:CDS | 35.0% | |
| TGCTGTTCCAAAGGATATAA+TGG | + | chr6.2:2881323-2881342 | MS.gene79024:CDS | 35.0% | |
| TGGGAGAGATCATATACTAA+AGG | - | chr6.2:2878902-2878921 | None:intergenic | 35.0% | |
| TGTACCTTGAACAATCCTAT+AGG | + | chr6.2:2882252-2882271 | MS.gene79024:intron | 35.0% | |
| TGTGAGGGTCAATATCAATA+TGG | - | chr6.2:2879612-2879631 | None:intergenic | 35.0% | |
| TGTGTGTGTGTATATATTGC+AGG | + | chr6.2:2876717-2876736 | MS.gene79024:intron | 35.0% | |
| TTAGAATCGCTGATAACTCT+GGG | - | chr6.2:2879351-2879370 | None:intergenic | 35.0% | |
| TTGACACTGAACAGTTTCAA+AGG | + | chr6.2:2876595-2876614 | MS.gene79024:intron | 35.0% | |
| ! | ATTTAGAGCTCAAGTGAGAA+AGG | + | chr6.2:2880256-2880275 | MS.gene79024:intron | 35.0% |
| !! | ACCATTTTTCTGTCAAATGG+TGG | - | chr6.2:2881484-2881503 | None:intergenic | 35.0% |
| !! | GTTGGCTTGAATGAGTAAAA+AGG | - | chr6.2:2882221-2882240 | None:intergenic | 35.0% |
| !! | TATAGGTTTGTTGTGGTTTC+CGG | + | chr6.2:2878174-2878193 | MS.gene79024:intron | 35.0% |
| !! | TCCACCATTTTTCTGTCAAA+TGG | - | chr6.2:2881487-2881506 | None:intergenic | 35.0% |
| !! | TGCCGGTTTATTCATATTGT+AGG | + | chr6.2:2880179-2880198 | MS.gene79024:intron | 35.0% |
| !! | TGTACTTATTGGCTCTATTC+TGG | + | chr6.2:2878298-2878317 | MS.gene79024:intron | 35.0% |
| !! | TTTTAAGAAAGTCACTCCTC+AGG | + | chr6.2:2881350-2881369 | MS.gene79024:CDS | 35.0% |
| !!! | GCTTAATGGGTTTTACTTGA+AGG | + | chr6.2:2878022-2878041 | MS.gene79024:intron | 35.0% |
| !!! | TTTTGAGGGTATCATTCCTT+TGG | + | chr6.2:2878250-2878269 | MS.gene79024:intron | 35.0% |
| AAGGTTACAAGTCTTACCCT+AGG | - | chr6.2:2880126-2880145 | None:intergenic | 40.0% | |
| AAGTGAGTCGATTGTTATCG+AGG | + | chr6.2:2877960-2877979 | MS.gene79024:intron | 40.0% | |
| ACCTTGAACAATCCTATAGG+TGG | + | chr6.2:2882255-2882274 | MS.gene79024:intron | 40.0% | |
| AGCATTCTCTTGGAGTGTAT+TGG | + | chr6.2:2878992-2879011 | MS.gene79024:CDS | 40.0% | |
| AGGAACCTTGACGAATTTAG+TGG | + | chr6.2:2877559-2877578 | MS.gene79024:intron | 40.0% | |
| ATATTGCTTTCGTGATCTGG+TGG | + | chr6.2:2878087-2878106 | MS.gene79024:intron | 40.0% | |
| ATGGTCTCCATTAACCTGTA+AGG | - | chr6.2:2880587-2880606 | None:intergenic | 40.0% | |
| ATTACCTTCCAGTATTCACC+AGG | - | chr6.2:2880992-2881011 | None:intergenic | 40.0% | |
| ATTCAATCCGTGAAACTTGC+TGG | + | chr6.2:2879181-2879200 | MS.gene79024:CDS | 40.0% | |
| ATTCTTGCCAAGGTTCAACA+AGG | + | chr6.2:2881432-2881451 | MS.gene79024:intron | 40.0% | |
| CACTTGGCAGGAAATGATAT+TGG | + | chr6.2:2880080-2880099 | MS.gene79024:intron | 40.0% | |
| CCCATTAAGCGTATATGACT+AGG | - | chr6.2:2878012-2878031 | None:intergenic | 40.0% | |
| CGTTCAAACAAGTGACTGAA+TGG | - | chr6.2:2879318-2879337 | None:intergenic | 40.0% | |
| CTTAGAATCGCTGATAACTC+TGG | - | chr6.2:2879352-2879371 | None:intergenic | 40.0% | |
| GAGAATGCTCAAATCTGGAA+TGG | - | chr6.2:2878981-2879000 | None:intergenic | 40.0% | |
| GAGTTATCAGCGATTCTAAG+TGG | + | chr6.2:2879352-2879371 | MS.gene79024:CDS | 40.0% | |
| GCATATGTCTGTGATCTTAC+AGG | + | chr6.2:2879129-2879148 | MS.gene79024:intron | 40.0% | |
| GTACTCAAAAAAGCCAGAAC+TGG | + | chr6.2:2882158-2882177 | MS.gene79024:CDS | 40.0% | |
| TAACGAGTATGCTGTTCCAA+AGG | + | chr6.2:2881314-2881333 | MS.gene79024:CDS | 40.0% | |
| TACAATAATACTGCCACAGC+AGG | - | chr6.2:2878282-2878301 | None:intergenic | 40.0% | |
| TACCCTAGGTAGAGCAAATT+CGG | - | chr6.2:2880112-2880131 | None:intergenic | 40.0% | |
| TAGGTCGCATGAACAAATGT+CGG | + | chr6.2:2879555-2879574 | MS.gene79024:intron | 40.0% | |
| TATTGCTTTCGTGATCTGGT+GGG | + | chr6.2:2878088-2878107 | MS.gene79024:intron | 40.0% | |
| TCCAAGAGAATGCTCAAATC+TGG | - | chr6.2:2878986-2879005 | None:intergenic | 40.0% | |
| TCCACCTATAGGATTGTTCA+AGG | - | chr6.2:2882259-2882278 | None:intergenic | 40.0% | |
| TCCAGATTTGAGCATTCTCT+TGG | + | chr6.2:2878982-2879001 | MS.gene79024:CDS | 40.0% | |
| TCTTCTAGCATTCAAGATCC+TGG | + | chr6.2:2880971-2880990 | MS.gene79024:CDS | 40.0% | |
| TGGGAACAAACTATATCCTG+AGG | - | chr6.2:2881369-2881388 | None:intergenic | 40.0% | |
| TGGGAACGTACTCAGAAAAT+CGG | - | chr6.2:2879933-2879952 | None:intergenic | 40.0% | |
| TGGTGGAGTTATGTTGAAAG+AGG | + | chr6.2:2881500-2881519 | MS.gene79024:CDS | 40.0% | |
| TTAGGACTTCTGCATGATGT+GGG | + | chr6.2:2879285-2879304 | MS.gene79024:intron | 40.0% | |
| TTCAAGATCCTGGTGAATAC+TGG | + | chr6.2:2880981-2881000 | MS.gene79024:CDS | 40.0% | |
| TTGAGAGTTCCCTACAGATT+CGG | - | chr6.2:2877411-2877430 | None:intergenic | 40.0% | |
| TTTGTAGGCTGCACTCAAAT+AGG | + | chr6.2:2877065-2877084 | MS.gene79024:intron | 40.0% | |
| ! | ACCAATTCAATGGTGATGCT+TGG | + | chr6.2:2877510-2877529 | MS.gene79024:intron | 40.0% |
| ! | ATCTCTTCTGGTGCATGTTT+TGG | + | chr6.2:2881680-2881699 | MS.gene79024:intron | 40.0% |
| ! | CCAATTCAATGGTGATGCTT+GGG | + | chr6.2:2877511-2877530 | MS.gene79024:intron | 40.0% |
| ! | CTTCGTGAGTTGAAACAACT+TGG | + | chr6.2:2876740-2876759 | MS.gene79024:CDS | 40.0% |
| ! | GAAAGCATAATCCTCTGGAA+AGG | + | chr6.2:2881565-2881584 | MS.gene79024:CDS | 40.0% |
| !! | AGACTGATTTGAGTCAGTGT+GGG | + | chr6.2:2878122-2878141 | MS.gene79024:intron | 40.0% |
| !! | ATGGGTGGTTATTTTGCACT+TGG | + | chr6.2:2880064-2880083 | MS.gene79024:intron | 40.0% |
| !! | GTCAAAATCGATTTGACTCG+TGG | + | chr6.2:2881543-2881562 | MS.gene79024:CDS | 40.0% |
| !! | GTCTTGGTATAGGTTTGTTG+TGG | + | chr6.2:2878167-2878186 | MS.gene79024:intron | 40.0% |
| !! | TAGACTGATTTGAGTCAGTG+TGG | + | chr6.2:2878121-2878140 | MS.gene79024:intron | 40.0% |
| !! | TCAGGATATAGTTTGTTCCC+AGG | + | chr6.2:2881368-2881387 | MS.gene79024:CDS | 40.0% |
| !! | TGTTTCAGGTTTCACACACT+TGG | + | chr6.2:2878939-2878958 | MS.gene79024:intron | 40.0% |
| !!! | TGGCAGCATTCACTTTTTCA+AGG | + | chr6.2:2881703-2881722 | MS.gene79024:intron | 40.0% |
| ACAGGTTAATGGAGACCATG+CGG | + | chr6.2:2880588-2880607 | MS.gene79024:intron | 45.0% | |
| AGAGTCGAGGACCAATTCAA+TGG | + | chr6.2:2877500-2877519 | MS.gene79024:intron | 45.0% | |
| AGATCCTGGTGAATACTGGA+AGG | + | chr6.2:2880985-2881004 | MS.gene79024:CDS | 45.0% | |
| AGGTACAAGGTCAGTGATGT+TGG | - | chr6.2:2882239-2882258 | None:intergenic | 45.0% | |
| AGTGGCAAACAACTTGTGGA+TGG | - | chr6.2:2880744-2880763 | None:intergenic | 45.0% | |
| ATGACTGATGCTGATAGCCA+CGG | + | chr6.2:2879865-2879884 | MS.gene79024:intron | 45.0% | |
| ATTAGTCCTTACCAGAGTCG+AGG | + | chr6.2:2877487-2877506 | MS.gene79024:intron | 45.0% | |
| ATTGAATTGGTCCTCGACTC+TGG | - | chr6.2:2877501-2877520 | None:intergenic | 45.0% | |
| CCACAGCAGGAAAAAACCAA+AGG | - | chr6.2:2878269-2878288 | None:intergenic | 45.0% | |
| CCCAAGCATCACCATTGAAT+TGG | - | chr6.2:2877514-2877533 | None:intergenic | 45.0% | |
| CTTGGAGTGTATTGGATTGC+TGG | + | chr6.2:2879000-2879019 | MS.gene79024:CDS | 45.0% | |
| GGGAACGTACTCAGAAAATC+GGG | - | chr6.2:2879932-2879951 | None:intergenic | 45.0% | |
| GTTAGGACTTCTGCATGATG+TGG | + | chr6.2:2879284-2879303 | MS.gene79024:intron | 45.0% | |
| TAACGGCGTTTCTTCTTCTC+TGG | - | chr6.2:2882352-2882371 | None:intergenic | 45.0% | |
| TGATTTGAGTCAGTGTGGGA+CGG | + | chr6.2:2878126-2878145 | MS.gene79024:intron | 45.0% | |
| TGCTAGGTGTGTCTTGGTAT+AGG | + | chr6.2:2878157-2878176 | MS.gene79024:intron | 45.0% | |
| TGGTGCATCCATAAACTTCG+TGG | + | chr6.2:2880855-2880874 | MS.gene79024:intron | 45.0% | |
| TTGACACAACCAACACAACG+AGG | + | chr6.2:2878750-2878769 | MS.gene79024:intron | 45.0% | |
| TTTCCAGGCAATGGAACTCA+TGG | + | chr6.2:2880907-2880926 | MS.gene79024:intron | 45.0% | |
| ! | AGTTGATTCTGCGCATTCGA+AGG | + | chr6.2:2881169-2881188 | MS.gene79024:CDS | 45.0% |
| ! | CTCCGAATTTGCTCTACCTA+GGG | + | chr6.2:2880107-2880126 | MS.gene79024:CDS | 45.0% |
| ! | TAGGGGCTTTGATGTTCCAT+AGG | + | chr6.2:2878209-2878228 | MS.gene79024:intron | 45.0% |
| ! | TCGTGGAAAGCATAATCCTC+TGG | + | chr6.2:2881560-2881579 | MS.gene79024:CDS | 45.0% |
| ! | TCTCTAGCTTCCTTCAGTTC+TGG | - | chr6.2:2881150-2881169 | None:intergenic | 45.0% |
| !! | CGTTGTGTTGGTTGTGTCAA+TGG | - | chr6.2:2878750-2878769 | None:intergenic | 45.0% |
| !! | GTGGTTATTTTGCACTTGGC+AGG | + | chr6.2:2880068-2880087 | MS.gene79024:intron | 45.0% |
| !! | TAGGTTTGCTAGGTGTGTCT+TGG | + | chr6.2:2878151-2878170 | MS.gene79024:intron | 45.0% |
| !! | TCTTCTGGTGCATGTTTTGG+TGG | + | chr6.2:2881683-2881702 | MS.gene79024:intron | 45.0% |
| !! | TTCACACACTTGGTGTATCC+AGG | + | chr6.2:2878949-2878968 | MS.gene79024:CDS | 45.0% |
| !!! | CCTTTGGTTTTTTCCTGCTG+TGG | + | chr6.2:2878266-2878285 | MS.gene79024:intron | 45.0% |
| !! | AATAAAATAAAAATTATACT+TGG | - | chr6.2:2879053-2879072 | None:intergenic | 5.0% |
| !!! | AAATAATTTTAAAAAATGAA+TGG | - | chr6.2:2879244-2879263 | None:intergenic | 5.0% |
| AAGTGGCTTATGCGCTCATC+AGG | - | chr6.2:2882102-2882121 | None:intergenic | 50.0% | |
| AATTGGGGACCTCGTTGTGT+TGG | - | chr6.2:2878762-2878781 | None:intergenic | 50.0% | |
| ACACAACGAGGTCCCCAATT+TGG | + | chr6.2:2878762-2878781 | MS.gene79024:intron | 50.0% | |
| AGTAGAGCACAGAACTACCG+TGG | - | chr6.2:2879885-2879904 | None:intergenic | 50.0% | |
| ATCTTACAGGGCATGGAGCT+TGG | + | chr6.2:2879142-2879161 | MS.gene79024:intron | 50.0% | |
| ATTGGTCCTCGACTCTGGTA+AGG | - | chr6.2:2877496-2877515 | None:intergenic | 50.0% | |
| CAACCATGAGTTCCATTGCC+TGG | - | chr6.2:2880913-2880932 | None:intergenic | 50.0% | |
| CACGAGTGGCAAACAACTTG+TGG | - | chr6.2:2880748-2880767 | None:intergenic | 50.0% | |
| CAGGTTAATGGAGACCATGC+GGG | + | chr6.2:2880589-2880608 | MS.gene79024:intron | 50.0% | |
| CTTCTGCATGATGTGGGACA+CGG | + | chr6.2:2879291-2879310 | MS.gene79024:CDS | 50.0% | |
| GACAAGATGCAGGCAACAAG+TGG | - | chr6.2:2882119-2882138 | None:intergenic | 50.0% | |
| GTCTGTGATCTTACAGGGCA+TGG | + | chr6.2:2879135-2879154 | MS.gene79024:intron | 50.0% | |
| TCTATACAGATCGGCACGAG+TGG | - | chr6.2:2880762-2880781 | None:intergenic | 50.0% | |
| TGATTCTGCGCATTCGAAGG+CGG | + | chr6.2:2881172-2881191 | MS.gene79024:CDS | 50.0% | |
| TGGCAAGGGAGAAGTCTCAA+TGG | - | chr6.2:2881130-2881149 | None:intergenic | 50.0% | |
| TTCTCCCTTGCCAGAACTGA+AGG | + | chr6.2:2881137-2881156 | MS.gene79024:CDS | 50.0% | |
| TTCTGCATGATGTGGGACAC+GGG | + | chr6.2:2879292-2879311 | MS.gene79024:CDS | 50.0% | |
| TTGTTGTGGTTTCCGGTGGA+AGG | + | chr6.2:2878181-2878200 | MS.gene79024:intron | 50.0% | |
| ! | AGCTTCCTTCAGTTCTGGCA+AGG | - | chr6.2:2881145-2881164 | None:intergenic | 50.0% |
| ! | GCTCCGAATTTGCTCTACCT+AGG | + | chr6.2:2880106-2880125 | MS.gene79024:CDS | 50.0% |
| ! | GCTTCCTTCAGTTCTGGCAA+GGG | - | chr6.2:2881144-2881163 | None:intergenic | 50.0% |
| ! | TGGGACGGTATAGGTTTGCT+AGG | + | chr6.2:2878141-2878160 | MS.gene79024:intron | 50.0% |
| !! | AGGTTTGTTGTGGTTTCCGG+TGG | + | chr6.2:2878177-2878196 | MS.gene79024:intron | 50.0% |
| !! | CTTTCGTGATCTGGTGGGTT+TGG | + | chr6.2:2878093-2878112 | MS.gene79024:intron | 50.0% |
| !! | TTCCGGTGGAAGGAGTGTTA+GGG | + | chr6.2:2878191-2878210 | MS.gene79024:intron | 50.0% |
| !! | TTTCCGGTGGAAGGAGTGTT+AGG | + | chr6.2:2878190-2878209 | MS.gene79024:intron | 50.0% |
| AATGGAGACCATGCGGGTCT+TGG | + | chr6.2:2880595-2880614 | MS.gene79024:CDS | 55.0% | |
| GACTGTCGAGCTTGTGGTCT+GGG | + | chr6.2:2880437-2880456 | MS.gene79024:CDS | 55.0% | |
| GAGTCAGTGTGGGACGGTAT+AGG | + | chr6.2:2878132-2878151 | MS.gene79024:intron | 55.0% | |
| GATTCTGCGCATTCGAAGGC+GGG | + | chr6.2:2881173-2881192 | MS.gene79024:CDS | 55.0% | |
| TCGAAGGCGGGATCTCTATC+AGG | + | chr6.2:2881185-2881204 | MS.gene79024:CDS | 55.0% | |
| TGACTGTCGAGCTTGTGGTC+TGG | + | chr6.2:2880436-2880455 | MS.gene79024:CDS | 55.0% | |
| ! | AATCTGGAATGGACAGCGCC+TGG | - | chr6.2:2878970-2878989 | None:intergenic | 55.0% |
| !! | TCCGGTGGAAGGAGTGTTAG+GGG | + | chr6.2:2878192-2878211 | MS.gene79024:intron | 55.0% |
| CTCGTCATCCAAGACCCGCA+TGG | - | chr6.2:2880606-2880625 | None:intergenic | 60.0% | |
| GCCCCTAACACTCCTTCCAC+CGG | - | chr6.2:2878196-2878215 | None:intergenic | 60.0% | |
| GCTCGTGACTGTCGAGCTTG+TGG | + | chr6.2:2880431-2880450 | MS.gene79024:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 2876399 | 2882381 | 2876399 | ID=MS.gene79024 |
| chr6.2 | mRNA | 2876399 | 2882381 | 2876399 | ID=MS.gene79024.t1;Parent=MS.gene79024 |
| chr6.2 | exon | 2876399 | 2876433 | 2876399 | ID=MS.gene79024.t1.exon1;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2876399 | 2876433 | 2876399 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2876739 | 2876761 | 2876739 | ID=MS.gene79024.t1.exon2;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2876739 | 2876761 | 2876739 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2878947 | 2879053 | 2878947 | ID=MS.gene79024.t1.exon3;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2878947 | 2879053 | 2878947 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2879151 | 2879202 | 2879151 | ID=MS.gene79024.t1.exon4;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2879151 | 2879202 | 2879151 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2879289 | 2879373 | 2879289 | ID=MS.gene79024.t1.exon5;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2879289 | 2879373 | 2879289 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2879558 | 2879648 | 2879558 | ID=MS.gene79024.t1.exon6;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2879558 | 2879648 | 2879558 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880090 | 2880128 | 2880090 | ID=MS.gene79024.t1.exon7;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880090 | 2880128 | 2880090 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880262 | 2880329 | 2880262 | ID=MS.gene79024.t1.exon8;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880262 | 2880329 | 2880262 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880418 | 2880480 | 2880418 | ID=MS.gene79024.t1.exon9;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880418 | 2880480 | 2880418 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880592 | 2880647 | 2880592 | ID=MS.gene79024.t1.exon10;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880592 | 2880647 | 2880592 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880735 | 2880808 | 2880735 | ID=MS.gene79024.t1.exon11;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880735 | 2880808 | 2880735 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2880914 | 2881006 | 2880914 | ID=MS.gene79024.t1.exon12;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2880914 | 2881006 | 2880914 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2881105 | 2881206 | 2881105 | ID=MS.gene79024.t1.exon13;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2881105 | 2881206 | 2881105 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2881309 | 2881389 | 2881309 | ID=MS.gene79024.t1.exon14;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2881309 | 2881389 | 2881309 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2881495 | 2881586 | 2881495 | ID=MS.gene79024.t1.exon15;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2881495 | 2881586 | 2881495 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2881709 | 2881724 | 2881709 | ID=MS.gene79024.t1.exon16;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2881709 | 2881724 | 2881709 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2882069 | 2882179 | 2882069 | ID=MS.gene79024.t1.exon17;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2882069 | 2882179 | 2882069 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| chr6.2 | exon | 2882274 | 2882381 | 2882274 | ID=MS.gene79024.t1.exon18;Parent=MS.gene79024.t1 |
| chr6.2 | CDS | 2882274 | 2882381 | 2882274 | ID=cds.MS.gene79024.t1;Parent=MS.gene79024.t1 |
| Gene Sequence |
| Protein sequence |
