Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061688.t1 | XP_013466729.1 | 96.7 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.00E+00 | 1313.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061688.t1 | Q9XIA9 | 67.2 | 658 | 210 | 5 | 9 | 663 | 11 | 665 | 6.0e-272 | 937.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061688.t1 | A0A072VRL7 | 96.7 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.0e+00 | 1313.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049681 | MS.gene061688 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene050787 | MS.gene061688 | 0.800805 | 1.21E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene061688 | 0.825786 | 3.88E-54 | -1.69E-46 |
| MS.gene056875 | MS.gene061688 | 0.803854 | 2.86E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene061688 | 0.832617 | 8.54E-56 | -1.69E-46 |
| MS.gene056933 | MS.gene061688 | 0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene056935 | MS.gene061688 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene061688 | 0.800339 | 1.51E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene061688 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene061688 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene061688 | 0.856156 | 3.89E-62 | -1.69E-46 |
| MS.gene061071 | MS.gene061688 | 0.946385 | 5.10E-105 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07328 | MS.gene061688 | PPI |
| MS.gene99632 | MS.gene061688 | PPI |
| MS.gene21662 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene005494 | PPI |
| MS.gene026629 | MS.gene061688 | PPI |
| MS.gene90444 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene33594 | PPI |
| MS.gene061688 | MS.gene048924 | PPI |
| MS.gene061688 | MS.gene80076 | PPI |
| MS.gene55795 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene63009 | PPI |
| MS.gene75435 | MS.gene061688 | PPI |
| MS.gene072726 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene044334 | PPI |
| MS.gene22308 | MS.gene061688 | PPI |
| MS.gene045073 | MS.gene061688 | PPI |
| MS.gene21663 | MS.gene061688 | PPI |
| MS.gene71307 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene25695 | PPI |
| MS.gene06068 | MS.gene061688 | PPI |
| MS.gene28831 | MS.gene061688 | PPI |
| MS.gene22309 | MS.gene061688 | PPI |
| MS.gene70469 | MS.gene061688 | PPI |
| MS.gene072680 | MS.gene061688 | PPI |
| MS.gene061688 | MS.gene20877 | PPI |
| MS.gene050419 | MS.gene061688 | PPI |
| MS.gene07080 | MS.gene061688 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061688.t1 | MTR_1g034360 | 96.682 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.0 | 1331 |
| MS.gene061688.t1 | MTR_4g068670 | 79.879 | 661 | 129 | 3 | 1 | 661 | 1 | 657 | 0.0 | 1123 |
| MS.gene061688.t1 | MTR_5g009350 | 57.100 | 662 | 280 | 3 | 3 | 663 | 4 | 662 | 0.0 | 804 |
| MS.gene061688.t1 | MTR_8g099420 | 56.860 | 656 | 279 | 3 | 5 | 659 | 7 | 659 | 0.0 | 796 |
| MS.gene061688.t1 | MTR_5g009350 | 57.805 | 647 | 269 | 3 | 3 | 648 | 4 | 647 | 0.0 | 795 |
| MS.gene061688.t1 | MTR_5g009360 | 56.968 | 653 | 277 | 3 | 5 | 656 | 6 | 655 | 0.0 | 790 |
| MS.gene061688.t1 | MTR_5g009350 | 56.498 | 554 | 237 | 3 | 3 | 555 | 4 | 554 | 0.0 | 660 |
| MS.gene061688.t1 | MTR_5g009350 | 57.143 | 546 | 230 | 3 | 3 | 547 | 4 | 546 | 0.0 | 659 |
| MS.gene061688.t1 | MTR_7g109830 | 48.636 | 660 | 333 | 4 | 5 | 662 | 4 | 659 | 0.0 | 650 |
| MS.gene061688.t1 | MTR_5g009360 | 57.774 | 521 | 217 | 2 | 137 | 656 | 11 | 529 | 0.0 | 646 |
| MS.gene061688.t1 | MTR_1g086600 | 46.224 | 662 | 348 | 5 | 5 | 662 | 26 | 683 | 0.0 | 615 |
| MS.gene061688.t1 | MTR_1g104810 | 40.260 | 616 | 348 | 9 | 48 | 657 | 18 | 619 | 3.64e-150 | 449 |
| MS.gene061688.t1 | MTR_1g104810 | 39.782 | 641 | 363 | 11 | 26 | 657 | 60 | 686 | 1.02e-148 | 447 |
| MS.gene061688.t1 | MTR_3g082660 | 32.428 | 663 | 390 | 17 | 36 | 655 | 79 | 726 | 4.80e-93 | 303 |
| MS.gene061688.t1 | MTR_1g030290 | 30.669 | 613 | 373 | 15 | 74 | 655 | 103 | 694 | 7.72e-86 | 283 |
| MS.gene061688.t1 | MTR_3g087980 | 29.386 | 684 | 425 | 15 | 12 | 655 | 27 | 692 | 9.89e-86 | 283 |
| MS.gene061688.t1 | MTR_3g084470 | 26.727 | 666 | 402 | 23 | 48 | 656 | 79 | 715 | 2.78e-46 | 175 |
| MS.gene061688.t1 | MTR_3g084450 | 25.444 | 676 | 401 | 23 | 48 | 656 | 81 | 720 | 3.29e-46 | 175 |
| MS.gene061688.t1 | MTR_3g084450 | 28.221 | 489 | 273 | 17 | 219 | 656 | 51 | 512 | 1.67e-39 | 152 |
| MS.gene061688.t1 | MTR_8g083170 | 24.812 | 665 | 421 | 19 | 48 | 656 | 83 | 724 | 6.43e-39 | 153 |
| MS.gene061688.t1 | MTR_4g057730 | 25.138 | 545 | 306 | 22 | 20 | 545 | 3 | 464 | 1.25e-26 | 114 |
| MS.gene061688.t1 | MTR_4g057730 | 25.138 | 545 | 306 | 22 | 20 | 545 | 3 | 464 | 1.41e-26 | 114 |
| MS.gene061688.t1 | MTR_4g057730 | 25.239 | 523 | 290 | 21 | 20 | 523 | 3 | 443 | 2.53e-26 | 113 |
| MS.gene061688.t1 | MTR_2g095510 | 24.118 | 510 | 288 | 20 | 52 | 545 | 35 | 461 | 7.31e-23 | 103 |
| MS.gene061688.t1 | MTR_2g095510 | 24.180 | 488 | 272 | 19 | 52 | 523 | 35 | 440 | 1.20e-22 | 102 |
| MS.gene061688.t1 | MTR_8g074120 | 24.594 | 431 | 248 | 15 | 133 | 545 | 47 | 418 | 2.13e-20 | 95.5 |
| MS.gene061688.t1 | MTR_1g063110 | 24.868 | 378 | 210 | 16 | 190 | 550 | 155 | 475 | 2.70e-20 | 95.5 |
| MS.gene061688.t1 | MTR_4g011790 | 23.577 | 492 | 294 | 15 | 103 | 568 | 115 | 550 | 2.51e-19 | 92.8 |
| MS.gene061688.t1 | MTR_5g007640 | 23.589 | 496 | 275 | 17 | 80 | 550 | 98 | 514 | 2.09e-18 | 89.7 |
| MS.gene061688.t1 | MTR_8g074040 | 22.841 | 521 | 310 | 20 | 52 | 545 | 52 | 507 | 4.13e-18 | 89.0 |
| MS.gene061688.t1 | MTR_4g011790 | 23.299 | 485 | 295 | 15 | 103 | 568 | 115 | 541 | 4.50e-18 | 88.6 |
| MS.gene061688.t1 | MTR_4g011790 | 23.299 | 485 | 295 | 15 | 103 | 568 | 115 | 541 | 4.92e-18 | 88.6 |
| MS.gene061688.t1 | MTR_1g063120 | 22.600 | 500 | 299 | 17 | 70 | 550 | 49 | 479 | 3.37e-17 | 85.9 |
| MS.gene061688.t1 | MTR_3g035130 | 21.553 | 515 | 305 | 17 | 71 | 572 | 25 | 453 | 7.80e-17 | 84.3 |
| MS.gene061688.t1 | MTR_4g005750 | 23.770 | 488 | 282 | 17 | 80 | 550 | 54 | 468 | 4.66e-16 | 82.0 |
| MS.gene061688.t1 | MTR_3g088880 | 26.371 | 383 | 219 | 12 | 151 | 523 | 128 | 457 | 4.52e-15 | 79.0 |
| MS.gene061688.t1 | MTR_8g074040 | 22.936 | 436 | 249 | 17 | 133 | 545 | 18 | 389 | 7.57e-15 | 78.2 |
| MS.gene061688.t1 | MTR_4g128337 | 24.152 | 501 | 267 | 21 | 79 | 550 | 59 | 475 | 6.27e-14 | 75.5 |
| MS.gene061688.t1 | MTR_1g073180 | 34.074 | 135 | 85 | 4 | 412 | 545 | 325 | 456 | 2.57e-11 | 67.0 |
| MS.gene061688.t1 | MTR_1g073180 | 34.074 | 135 | 85 | 4 | 412 | 545 | 347 | 478 | 3.14e-11 | 66.6 |
| MS.gene061688.t1 | MTR_5g023730 | 28.662 | 157 | 90 | 6 | 411 | 552 | 323 | 472 | 4.77e-11 | 66.2 |
| MS.gene061688.t1 | MTR_1569s0010 | 30.270 | 185 | 117 | 6 | 388 | 564 | 298 | 478 | 9.22e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061688.t1 | AT1G49430 | 67.173 | 658 | 210 | 5 | 9 | 663 | 11 | 665 | 0.0 | 943 |
| MS.gene061688.t1 | AT1G64400 | 55.030 | 656 | 292 | 2 | 5 | 659 | 6 | 659 | 0.0 | 800 |
| MS.gene061688.t1 | AT4G23850 | 56.815 | 653 | 278 | 3 | 5 | 656 | 7 | 656 | 0.0 | 792 |
| MS.gene061688.t1 | AT4G11030 | 55.606 | 660 | 289 | 3 | 5 | 663 | 7 | 663 | 0.0 | 773 |
| MS.gene061688.t1 | AT1G49430 | 65.859 | 495 | 164 | 4 | 9 | 501 | 11 | 502 | 0.0 | 697 |
| MS.gene061688.t1 | AT2G47240 | 48.182 | 660 | 336 | 4 | 5 | 662 | 4 | 659 | 0.0 | 646 |
| MS.gene061688.t1 | AT2G47240 | 48.182 | 660 | 336 | 4 | 5 | 662 | 4 | 659 | 0.0 | 646 |
| MS.gene061688.t1 | AT2G47240 | 48.182 | 660 | 336 | 4 | 5 | 662 | 4 | 659 | 0.0 | 646 |
| MS.gene061688.t1 | AT2G47240 | 48.756 | 603 | 304 | 3 | 62 | 662 | 1 | 600 | 0.0 | 600 |
| MS.gene061688.t1 | AT5G27600 | 42.139 | 617 | 335 | 11 | 48 | 657 | 88 | 689 | 1.22e-156 | 468 |
| MS.gene061688.t1 | AT3G05970 | 42.439 | 615 | 336 | 9 | 48 | 657 | 88 | 689 | 2.25e-156 | 468 |
| MS.gene061688.t1 | AT2G04350 | 31.462 | 677 | 376 | 17 | 40 | 655 | 70 | 719 | 1.34e-97 | 315 |
| MS.gene061688.t1 | AT2G04350 | 31.462 | 677 | 376 | 17 | 40 | 655 | 70 | 719 | 1.34e-97 | 315 |
| MS.gene061688.t1 | AT1G77590 | 31.034 | 609 | 373 | 15 | 74 | 655 | 102 | 690 | 5.58e-85 | 281 |
| MS.gene061688.t1 | AT1G77590 | 31.673 | 562 | 337 | 15 | 121 | 655 | 3 | 544 | 2.43e-78 | 259 |
| MS.gene061688.t1 | AT3G23790 | 25.260 | 673 | 404 | 23 | 48 | 656 | 85 | 722 | 1.05e-40 | 159 |
| MS.gene061688.t1 | AT4G14070 | 24.441 | 671 | 409 | 24 | 45 | 655 | 94 | 726 | 2.66e-38 | 152 |
| MS.gene061688.t1 | AT3G21240 | 24.224 | 483 | 292 | 15 | 80 | 552 | 65 | 483 | 1.22e-22 | 102 |
| MS.gene061688.t1 | AT3G21240 | 24.638 | 483 | 286 | 15 | 80 | 550 | 65 | 481 | 1.37e-22 | 102 |
| MS.gene061688.t1 | AT3G21240 | 24.638 | 483 | 286 | 15 | 80 | 550 | 65 | 481 | 1.37e-22 | 102 |
| MS.gene061688.t1 | AT1G51680 | 24.900 | 498 | 298 | 16 | 74 | 557 | 60 | 495 | 4.59e-21 | 97.8 |
| MS.gene061688.t1 | AT1G51680 | 25.051 | 491 | 292 | 16 | 74 | 550 | 60 | 488 | 6.05e-21 | 97.1 |
| MS.gene061688.t1 | AT1G51680 | 24.900 | 498 | 298 | 16 | 74 | 557 | 60 | 495 | 6.75e-21 | 97.4 |
| MS.gene061688.t1 | AT3G16170 | 23.093 | 485 | 288 | 15 | 103 | 569 | 130 | 547 | 4.83e-20 | 95.1 |
| MS.gene061688.t1 | AT4G05160 | 24.017 | 483 | 280 | 19 | 79 | 545 | 55 | 466 | 2.80e-19 | 92.4 |
| MS.gene061688.t1 | AT4G19010 | 26.042 | 384 | 224 | 13 | 171 | 545 | 152 | 484 | 2.50e-18 | 89.4 |
| MS.gene061688.t1 | AT1G65890 | 23.926 | 489 | 281 | 17 | 79 | 539 | 40 | 465 | 7.62e-18 | 87.8 |
| MS.gene061688.t1 | AT2G47245 | 47.368 | 76 | 40 | 0 | 22 | 97 | 53 | 128 | 2.52e-17 | 79.3 |
| MS.gene061688.t1 | AT5G16340 | 22.289 | 498 | 303 | 15 | 80 | 556 | 42 | 476 | 1.39e-16 | 84.0 |
| MS.gene061688.t1 | AT1G66120 | 22.461 | 512 | 300 | 17 | 79 | 565 | 40 | 479 | 7.57e-16 | 81.6 |
| MS.gene061688.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 4.79e-14 | 75.9 |
| MS.gene061688.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 5.82e-14 | 75.5 |
| MS.gene061688.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 7.08e-14 | 75.1 |
| MS.gene061688.t1 | AT1G20500 | 25.490 | 306 | 172 | 11 | 222 | 523 | 198 | 451 | 2.89e-12 | 70.1 |
Find 162 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGATCCGCAATAGGATTT+TGG | 0.231454 | 1.3:-19122220 | MS.gene061688:CDS |
| AAAGGCAAGACAATACATTT+TGG | 0.247388 | 1.3:-19120574 | MS.gene061688:CDS |
| TGTATTCAGATTTGGGTATA+TGG | 0.255174 | 1.3:-19120711 | MS.gene061688:intron |
| TTCTGTTCTTTAGGGAAGTT+TGG | 0.261173 | 1.3:-19122824 | MS.gene061688:intron |
| TGTCTGTCAACCTAATAATT+TGG | 0.273590 | 1.3:+19122674 | None:intergenic |
| CTTCCAAGCATTTGGTTGTT+GGG | 0.276092 | 1.3:+19124407 | None:intergenic |
| AAGAATGAAGCTGAGGAATT+TGG | 0.283576 | 1.3:-19123126 | MS.gene061688:CDS |
| GGTCTTATGGAGTTGCCTTC+TGG | 0.290118 | 1.3:-19125355 | MS.gene061688:CDS |
| TTGGCACATCCTGCTTCTCC+TGG | 0.291225 | 1.3:-19123107 | MS.gene061688:CDS |
| AGTCCCCTTGGGATTTCTTC+AGG | 0.293756 | 1.3:-19125327 | MS.gene061688:intron |
| CCTTCCAAGCATTTGGTTGT+TGG | 0.301895 | 1.3:+19124406 | None:intergenic |
| TGTCTATTGACCAAATTATT+AGG | 0.302814 | 1.3:-19122684 | MS.gene061688:CDS |
| GGAGATCACTGTGGCATATA+TGG | 0.312178 | 1.3:-19124003 | MS.gene061688:CDS |
| GCAGCTCAAAGCTATTTATC+TGG | 0.319379 | 1.3:-19120398 | MS.gene061688:CDS |
| ATGATAAACTCCACAGCATT+AGG | 0.321331 | 1.3:+19123491 | None:intergenic |
| GAAATCATTGCAGGCGATAT+TGG | 0.325045 | 1.3:-19120962 | MS.gene061688:intron |
| ACTCAAGAGGTTATAGTTGA+TGG | 0.333385 | 1.3:-19121097 | MS.gene061688:CDS |
| ATTCTTAATAATGACACCTT+TGG | 0.336671 | 1.3:+19122729 | None:intergenic |
| TTATGCCAAAGATGGTCTTA+TGG | 0.345504 | 1.3:-19125368 | MS.gene061688:CDS |
| TTCTTAATAATGACACCTTT+GGG | 0.350658 | 1.3:+19122730 | None:intergenic |
| CAACTCCATAAGACCATCTT+TGG | 0.351332 | 1.3:+19125363 | None:intergenic |
| CTCTCTATGTCAAAGGGAAT+TGG | 0.353095 | 1.3:+19120373 | None:intergenic |
| ATGAAACTCTCTCAGCTTAG+AGG | 0.361608 | 1.3:-19120427 | MS.gene061688:intron |
| TTCTCATGGCTGAGCCCATT+TGG | 0.365351 | 1.3:+19124180 | None:intergenic |
| TTCTTTAGGGAAGTTTGGAT+TGG | 0.369117 | 1.3:-19122819 | MS.gene061688:intron |
| TTCAGGCAGGACCTTATTCA+TGG | 0.376144 | 1.3:-19124235 | MS.gene061688:intron |
| AAGGCGCAGCTCCGGATAAC+AGG | 0.381647 | 1.3:+19121545 | None:intergenic |
| CTTTATTCTTGCAGGATGTC+AGG | 0.384629 | 1.3:-19122111 | MS.gene061688:intron |
| TCCATTGCAATGATCCATTC+AGG | 0.384998 | 1.3:+19123970 | None:intergenic |
| TCCACATTATCACAAGGATA+TGG | 0.393095 | 1.3:-19121481 | MS.gene061688:intron |
| GTTGTAGCTATTGTGAGCTT+TGG | 0.395332 | 1.3:-19123168 | MS.gene061688:intron |
| TGCAATAGGTCGCCATTATC+TGG | 0.395954 | 1.3:+19122249 | None:intergenic |
| TCCTCAAGAGCCTTTCTGTC+GGG | 0.397134 | 1.3:+19120651 | None:intergenic |
| AAACACTCCTCCACATGAAT+AGG | 0.401909 | 1.3:+19121520 | None:intergenic |
| AAAAGCAAAGTTTCATCTGC+TGG | 0.404565 | 1.3:-19121870 | MS.gene061688:CDS |
| TTCTGGTTTAGAGTCCCCTT+GGG | 0.408562 | 1.3:-19125338 | MS.gene061688:CDS |
| TTTGACGCCTTCCAAGCATT+TGG | 0.409790 | 1.3:+19124399 | None:intergenic |
| CTTCTGGTTTAGAGTCCCCT+TGG | 0.410896 | 1.3:-19125339 | MS.gene061688:CDS |
| GGCGACCTATTGCATCTTCA+AGG | 0.411535 | 1.3:-19122240 | MS.gene061688:CDS |
| TCTTTAGGGAAGTTTGGATT+GGG | 0.415694 | 1.3:-19122818 | MS.gene061688:intron |
| CAGAAAGGCTCTTGAGGATT+GGG | 0.422632 | 1.3:-19120646 | MS.gene061688:CDS |
| TGATAGACTTGTGTTTGATA+AGG | 0.431832 | 1.3:-19121678 | MS.gene061688:intron |
| TTATGATGTTTCCATCCAAA+TGG | 0.433621 | 1.3:-19124195 | MS.gene061688:CDS |
| TCATGTATACGACCAGATAA+TGG | 0.442009 | 1.3:-19122261 | MS.gene061688:CDS |
| TTATATGTGAGCCATGAATA+AGG | 0.443315 | 1.3:+19124224 | None:intergenic |
| ACAGAAAGGCTCTTGAGGAT+TGG | 0.443998 | 1.3:-19120647 | MS.gene061688:CDS |
| TGGCACATCCTGCTTCTCCT+GGG | 0.450249 | 1.3:-19123106 | MS.gene061688:CDS |
| ATCTTCAAGGGATCCGCAAT+AGG | 0.452207 | 1.3:-19122227 | MS.gene061688:CDS |
| ATGTACACAAGTGGAACAAC+AGG | 0.456132 | 1.3:-19122757 | MS.gene061688:CDS |
| GGTCTCTTCAATTTAAATGT+TGG | 0.457179 | 1.3:+19120337 | None:intergenic |
| AGAGGAAACTCCTTGTTCTC+TGG | 0.462169 | 1.3:-19121142 | MS.gene061688:CDS |
| AATTTCTCCACGTGGCTCGC+TGG | 0.463895 | 1.3:+19121171 | None:intergenic |
| GTTGATGGTTGGTTTCATAC+AGG | 0.465886 | 1.3:-19121082 | MS.gene061688:intron |
| GGTCTTACTGAAAGCTGTGC+TGG | 0.466257 | 1.3:-19121307 | MS.gene061688:CDS |
| TACATGAGCAAGAGGAAGAA+AGG | 0.467152 | 1.3:+19122277 | None:intergenic |
| GCATAAATGCATCTATAGAC+AGG | 0.467561 | 1.3:+19125385 | None:intergenic |
| TTGGATGAGCTTAAAAGCAC+TGG | 0.469943 | 1.3:-19120555 | MS.gene061688:CDS |
| CGCGTTCGTATCCTGTTATC+CGG | 0.470460 | 1.3:-19121556 | MS.gene061688:CDS |
| TCAAATTGATGAACTATATG+AGG | 0.472343 | 1.3:-19120040 | MS.gene061688:CDS |
| TTGGCAGGGATTCTGTTAAG+AGG | 0.476289 | 1.3:-19124433 | MS.gene061688:intron |
| CATGGCTGAGCCCATTTGGA+TGG | 0.480170 | 1.3:+19124184 | None:intergenic |
| AAACTCTCCCCAGGAGAAGC+AGG | 0.483921 | 1.3:+19123098 | None:intergenic |
| CAACTATAACCTCTTGAGTA+AGG | 0.484832 | 1.3:+19121101 | None:intergenic |
| AGCCCCAACAACCAAATGCT+TGG | 0.486490 | 1.3:-19124410 | MS.gene061688:CDS |
| TGAGTCATTCTTGGTGGCTG+TGG | 0.489343 | 1.3:-19120679 | MS.gene061688:CDS |
| TTCCAAGCATTTGGTTGTTG+GGG | 0.491854 | 1.3:+19124408 | None:intergenic |
| AATAGGCAAAGGCGCAGCTC+CGG | 0.492905 | 1.3:+19121537 | None:intergenic |
| GATTTGAAGAACACCGATCA+AGG | 0.492945 | 1.3:+19123283 | None:intergenic |
| TATGATGTTTCCATCCAAAT+GGG | 0.493538 | 1.3:-19124194 | MS.gene061688:CDS |
| GCTGGGTGTTTCACAGCAAT+CGG | 0.493542 | 1.3:-19121289 | MS.gene061688:CDS |
| CCTGGCCTCGATGGTTGTCA+TGG | 0.495595 | 1.3:+19121231 | None:intergenic |
| AGTTTCAATTGCATTTGTAC+AGG | 0.496334 | 1.3:-19123456 | MS.gene061688:CDS |
| TTCATGGCTCACATATAAAG+AGG | 0.498137 | 1.3:-19124219 | MS.gene061688:CDS |
| AGATCTCTCTCTATGTCAAA+GGG | 0.498603 | 1.3:+19120367 | None:intergenic |
| GGAAGGCCTGCTACATCTGA+TGG | 0.500055 | 1.3:-19125424 | MS.gene061688:CDS |
| TTGTAGTATTTCAGTAATTG+TGG | 0.505813 | 1.3:+19120316 | None:intergenic |
| ATTGGAGAATGGCAACCAAA+TGG | 0.506109 | 1.3:-19120944 | MS.gene061688:CDS |
| AGTGCGTCATATCCCATCTC+TGG | 0.507383 | 1.3:+19121196 | None:intergenic |
| ATCTTTATGTGAAAATCTAA+AGG | 0.508165 | 1.3:-19120592 | MS.gene061688:CDS |
| GAACTATATGAGGAAGCAAA+AGG | 0.513195 | 1.3:-19120030 | MS.gene061688:CDS |
| CTGGGGAGAGTTTCTCCAGT+TGG | 0.516499 | 1.3:-19123088 | MS.gene061688:intron |
| GGATCCCTTGAAGATGCAAT+AGG | 0.517759 | 1.3:+19122235 | None:intergenic |
| AGATTCAAGCCTGGCCTCGA+TGG | 0.521799 | 1.3:+19121222 | None:intergenic |
| ATTGACGCCACGGCTTCTCA+TGG | 0.522710 | 1.3:+19124166 | None:intergenic |
| GCTTGAATCTGTACCAGAGA+TGG | 0.522837 | 1.3:-19121209 | MS.gene061688:CDS |
| GTCTTACTGAAAGCTGTGCT+GGG | 0.523419 | 1.3:-19121306 | MS.gene061688:CDS |
| CTAATACGATCGAAAACTCT+AGG | 0.525017 | 1.3:+19122037 | None:intergenic |
| AACACAAGTCTATCAAAGAA+AGG | 0.528426 | 1.3:+19121686 | None:intergenic |
| CCATGACAACCATCGAGGCC+AGG | 0.528881 | 1.3:-19121231 | MS.gene061688:CDS |
| GGCACATCCTGCTTCTCCTG+GGG | 0.532121 | 1.3:-19123105 | MS.gene061688:CDS |
| TAGATCTCTCTCTATGTCAA+AGG | 0.533185 | 1.3:+19120366 | None:intergenic |
| CTCTGGTACAGATTCAAGCC+TGG | 0.534664 | 1.3:+19121213 | None:intergenic |
| AAGCATACCGATGATATAAG+AGG | 0.536051 | 1.3:+19120824 | None:intergenic |
| AGATGCATTTATGCCAAAGA+TGG | 0.539890 | 1.3:-19125376 | MS.gene061688:CDS |
| AAGAGGTTATAGTTGATGGT+TGG | 0.543539 | 1.3:-19121093 | MS.gene061688:CDS |
| GCAATGCCCTCTTATATCAT+CGG | 0.544084 | 1.3:-19120831 | MS.gene061688:intron |
| ACCATATCCTTGTGATAATG+TGG | 0.544732 | 1.3:+19121480 | None:intergenic |
| AGAACAAGGAGTTTCCTCTC+AGG | 0.546548 | 1.3:+19121146 | None:intergenic |
| ATACCAAGGGAGTCATATAG+TGG | 0.546991 | 1.3:+19123831 | None:intergenic |
| AAAGGTGCTGCTTTGTGTTG+TGG | 0.547465 | 1.3:+19121704 | None:intergenic |
| GGCCTTCCATCAGATGTAGC+AGG | 0.548577 | 1.3:+19125418 | None:intergenic |
| CAAGTTAAGATATCTAGAGA+AGG | 0.550231 | 1.3:-19121732 | MS.gene061688:CDS |
| CTGTGAAAGTTGAGGAAGGA+AGG | 0.550847 | 1.3:-19125441 | MS.gene061688:CDS |
| AATATCTTTAAATTATCTCA+AGG | 0.551439 | 1.3:-19120893 | MS.gene061688:CDS |
| ATGGTGCCAACTGTCCTGAA+TGG | 0.551719 | 1.3:-19123984 | MS.gene061688:CDS |
| AAAGCAAAGTTTCATCTGCT+GGG | 0.552825 | 1.3:-19121869 | MS.gene061688:CDS |
| AATGATCCATTCAGGACAGT+TGG | 0.553413 | 1.3:+19123978 | None:intergenic |
| CTTGAATCTGTACCAGAGAT+GGG | 0.556327 | 1.3:-19121208 | MS.gene061688:CDS |
| TTTCAGTTTCATAATGTCAG+AGG | 0.559921 | 1.3:-19125470 | None:intergenic |
| CCAACAACCAAATGCTTGGA+AGG | 0.561267 | 1.3:-19124406 | MS.gene061688:CDS |
| AACTCACAGGATTGACGCCA+CGG | 0.562611 | 1.3:+19124156 | None:intergenic |
| ATCCTCAAGAGCCTTTCTGT+CGG | 0.564145 | 1.3:+19120650 | None:intergenic |
| CCCCGACAGAAAGGCTCTTG+AGG | 0.568269 | 1.3:-19120652 | MS.gene061688:CDS |
| CCTCAAGAGCCTTTCTGTCG+GGG | 0.569393 | 1.3:+19120652 | None:intergenic |
| TGTGGTAGTCCCCGACAGAA+AGG | 0.569904 | 1.3:-19120661 | MS.gene061688:CDS |
| TATACTGTGAAAGTTGAGGA+AGG | 0.570953 | 1.3:-19125445 | MS.gene061688:CDS |
| GCCTTTGCCTATTCATGTGG+AGG | 0.572128 | 1.3:-19121527 | MS.gene061688:CDS |
| GGCTCAGCCATGAGAAGCCG+TGG | 0.573313 | 1.3:-19124173 | MS.gene061688:CDS |
| TGCACAATAATGTACACAAG+TGG | 0.574901 | 1.3:-19122766 | MS.gene061688:CDS |
| AGCATACCGATGATATAAGA+GGG | 0.579755 | 1.3:+19120825 | None:intergenic |
| GTGTCTGAACATCTTCAAGC+AGG | 0.580383 | 1.3:+19122086 | None:intergenic |
| GTTCCACTATATGACTCCCT+TGG | 0.581269 | 1.3:-19123834 | MS.gene061688:intron |
| TGCGCCTTTGCCTATTCATG+TGG | 0.582303 | 1.3:-19121530 | MS.gene061688:CDS |
| TTGCAGGCGATATTGGAGAA+TGG | 0.585107 | 1.3:-19120955 | MS.gene061688:intron |
| CTGGCCTCGATGGTTGTCAT+GGG | 0.586370 | 1.3:+19121232 | None:intergenic |
| CTATAGACAGGGCCTACTGA+TGG | 0.590521 | 1.3:+19125397 | None:intergenic |
| GGTTTATACTGTGAAAGTTG+AGG | 0.592335 | 1.3:-19125449 | MS.gene061688:CDS |
| AAGTTAAGATATCTAGAGAA+GGG | 0.592630 | 1.3:-19121731 | MS.gene061688:CDS |
| TATTAGGTTGACAGACAAAG+TGG | 0.595571 | 1.3:-19122668 | MS.gene061688:intron |
| GCGACAAGACCTTACTCAAG+AGG | 0.596877 | 1.3:-19121110 | MS.gene061688:CDS |
| TCCTGAATGGATCATTGCAA+TGG | 0.598033 | 1.3:-19123971 | MS.gene061688:CDS |
| CGTGGAGAAATTTGCCTGAG+AGG | 0.601376 | 1.3:-19121160 | MS.gene061688:CDS |
| CTCAGGCAAATTTCTCCACG+TGG | 0.603950 | 1.3:+19121163 | None:intergenic |
| GCGACCTATTGCATCTTCAA+GGG | 0.606972 | 1.3:-19122239 | MS.gene061688:CDS |
| CCTAACAGGTCCTAATGCTG+TGG | 0.607823 | 1.3:-19123501 | MS.gene061688:intron |
| TGAGGAAGCAAAAGGAACAA+AGG | 0.608554 | 1.3:-19120022 | MS.gene061688:CDS |
| GGCCTGCTACATCTGATGGA+AGG | 0.614561 | 1.3:-19125420 | MS.gene061688:CDS |
| TGGTCGTATACATGAGCAAG+AGG | 0.622399 | 1.3:+19122269 | None:intergenic |
| GTACATTATTGTGCAAATGT+CGG | 0.623251 | 1.3:+19122774 | None:intergenic |
| TGGTAGACAAAACAAGCGCT+AGG | 0.626047 | 1.3:-19121583 | MS.gene061688:intron |
| ATGCAATTGAAACTTCAGCA+TGG | 0.627938 | 1.3:+19123465 | None:intergenic |
| CTTGTGATAACCAGAGAACA+AGG | 0.630070 | 1.3:+19121132 | None:intergenic |
| CAAGGGGACTCTAAACCAGA+AGG | 0.631617 | 1.3:+19125340 | None:intergenic |
| CAACTGGAGAAACTCTCCCC+AGG | 0.632932 | 1.3:+19123089 | None:intergenic |
| TCCTCCACATGAATAGGCAA+AGG | 0.633863 | 1.3:+19121526 | None:intergenic |
| GCCTTGCCAAAATCCTATTG+CGG | 0.638671 | 1.3:+19122214 | None:intergenic |
| ACAATTACTGAAATACTACA+AGG | 0.640007 | 1.3:-19120314 | MS.gene061688:intron |
| AGTGACCTGAAGAAATCCCA+AGG | 0.641289 | 1.3:+19125322 | None:intergenic |
| TCTGATGGAAGGCCATCAGT+AGG | 0.643213 | 1.3:-19125409 | MS.gene061688:CDS |
| GGAACACCACAAAATATAGT+CGG | 0.646136 | 1.3:+19122058 | None:intergenic |
| TGAATGGATCATTGCAATGG+AGG | 0.648367 | 1.3:-19123968 | MS.gene061688:intron |
| CACACAAAAGAATGAAGCTG+AGG | 0.651357 | 1.3:-19123133 | MS.gene061688:CDS |
| CATAAATGCATCTATAGACA+GGG | 0.653651 | 1.3:+19125386 | None:intergenic |
| GAGTGTTTGAGAGTCACTAG+TGG | 0.663036 | 1.3:-19121505 | MS.gene061688:CDS |
| GTGACCTGAAGAAATCCCAA+GGG | 0.664419 | 1.3:+19125323 | None:intergenic |
| TAGACAAAACAAGCGCTAGG+TGG | 0.692819 | 1.3:-19121580 | MS.gene061688:CDS |
| AGTGGATCCACATTATCACA+AGG | 0.714395 | 1.3:-19121487 | MS.gene061688:CDS |
| GGAACAACAGGAGAACCCAA+AGG | 0.717485 | 1.3:-19122745 | MS.gene061688:CDS |
| AATTCCCATGACAACCATCG+AGG | 0.735979 | 1.3:-19121236 | MS.gene061688:CDS |
| GCACTTTCCAGCGAGCCACG+TGG | 0.736980 | 1.3:-19121178 | MS.gene061688:CDS |
| TGTTACTAGGGAGATCACTG+TGG | 0.745755 | 1.3:-19124012 | MS.gene061688:intron |
| TGACCTGAAGAAATCCCAAG+GGG | 0.758731 | 1.3:+19125324 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTTTAAATTATCTCA+AGG | - | chr1.3:19124581-19124600 | MS.gene061688:intron | 15.0% |
| !! | ATAAGTTTATAGGTATTTAT+AGG | - | chr1.3:19122916-19122935 | MS.gene061688:intron | 15.0% |
| !! | GAAATTTATTATCTGATTAA+TGG | - | chr1.3:19121434-19121453 | MS.gene061688:intron | 15.0% |
| !! | TTTAATCTTAGAAGTTTATA+TGG | - | chr1.3:19121012-19121031 | MS.gene061688:intron | 15.0% |
| !!! | ACAATTTTCTTTAAACTTTA+AGG | - | chr1.3:19122836-19122855 | MS.gene061688:intron | 15.0% |
| !!! | ATTAATTTGTCAACATTAAA+TGG | + | chr1.3:19122286-19122305 | None:intergenic | 15.0% |
| !!! | TAAAATAATATTGGTTTTGT+TGG | - | chr1.3:19123871-19123890 | MS.gene061688:intron | 15.0% |
| !!! | TACAACATTGTAATATTTTT+AGG | - | chr1.3:19123144-19123163 | MS.gene061688:CDS | 15.0% |
| !!! | TACTTTTCTAATAAGTTTAT+AGG | - | chr1.3:19122906-19122925 | MS.gene061688:intron | 15.0% |
| !! | AAACAAATGTTAGTTCAATA+TGG | + | chr1.3:19122154-19122173 | None:intergenic | 20.0% |
| !! | AAACTACAACAAAGAATAAA+TGG | + | chr1.3:19121146-19121165 | None:intergenic | 20.0% |
| !! | AACAAATGTTAGTTCAATAT+GGG | + | chr1.3:19122153-19122172 | None:intergenic | 20.0% |
| !! | AATCGCAACTAAAATAATAT+TGG | - | chr1.3:19123862-19123881 | MS.gene061688:CDS | 20.0% |
| !! | ACATGTATAATAGTAGTATT+TGG | - | chr1.3:19120979-19120998 | MS.gene061688:intron | 20.0% |
| !! | ACTGAAAAATTGAATGAATT+GGG | + | chr1.3:19122887-19122906 | None:intergenic | 20.0% |
| !! | ATAATCAGTATTAACAAAGT+TGG | + | chr1.3:19120872-19120891 | None:intergenic | 20.0% |
| !! | ATCTTTATGTGAAAATCTAA+AGG | - | chr1.3:19124882-19124901 | MS.gene061688:intron | 20.0% |
| !! | CAAAATCATATATACATACT+TGG | + | chr1.3:19124954-19124973 | None:intergenic | 20.0% |
| !! | CTATATAGTTTCACAAATAT+AGG | + | chr1.3:19123109-19123128 | None:intergenic | 20.0% |
| !! | TAAGCTATAGTTAATGAAAA+CGG | + | chr1.3:19120597-19120616 | None:intergenic | 20.0% |
| !! | TAATAGAACATTATGCTTTA+TGG | - | chr1.3:19122994-19123013 | MS.gene061688:intron | 20.0% |
| !! | TACTGAAAAATTGAATGAAT+TGG | + | chr1.3:19122888-19122907 | None:intergenic | 20.0% |
| !! | TATAGTAGAATTTCACAATT+TGG | - | chr1.3:19125305-19125324 | MS.gene061688:intron | 20.0% |
| !!! | ATATTTTTCATAAGCTATCT+TGG | - | chr1.3:19121823-19121842 | MS.gene061688:intron | 20.0% |
| !!! | ATCATTTATTTTTTTGTGAC+AGG | - | chr1.3:19124146-19124165 | MS.gene061688:intron | 20.0% |
| !!! | ATTAATGGTTTTATGTTACT+AGG | - | chr1.3:19121449-19121468 | MS.gene061688:intron | 20.0% |
| !!! | ATTCAATTTTACTATATTGC+AGG | - | chr1.3:19121591-19121610 | MS.gene061688:intron | 20.0% |
| !!! | CCACAATATAAAAAATTTTG+AGG | + | chr1.3:19122512-19122531 | None:intergenic | 20.0% |
| !!! | CCTCAAAATTTTTTATATTG+TGG | - | chr1.3:19122509-19122528 | MS.gene061688:intron | 20.0% |
| !!! | GATTATGTTACTTTAACTTA+TGG | - | chr1.3:19120886-19120905 | MS.gene061688:CDS | 20.0% |
| !!! | TAAAGTTTTCACAATTTAAC+AGG | + | chr1.3:19121198-19121217 | None:intergenic | 20.0% |
| !!! | TGCATATCAATATTTTCAAA+AGG | + | chr1.3:19122950-19122969 | None:intergenic | 20.0% |
| !!! | TTAATGGTTTTATGTTACTA+GGG | - | chr1.3:19121450-19121469 | MS.gene061688:intron | 20.0% |
| ! | AACTATAGCTTATGAAAAGA+AGG | - | chr1.3:19120605-19120624 | MS.gene061688:CDS | 25.0% |
| ! | AAGTTAAGATATCTAGAGAA+GGG | - | chr1.3:19123743-19123762 | MS.gene061688:intron | 25.0% |
| ! | AATAGAAGTAGCTTATACAT+AGG | + | chr1.3:19121757-19121776 | None:intergenic | 25.0% |
| ! | AATATTCTCTTTATTCTTGC+AGG | - | chr1.3:19123355-19123374 | MS.gene061688:intron | 25.0% |
| ! | AATGCATGACTTTATTATGT+TGG | - | chr1.3:19120281-19120300 | MS.gene061688:intron | 25.0% |
| ! | AATTTGTCAACATTAAATGG+AGG | + | chr1.3:19122283-19122302 | None:intergenic | 25.0% |
| ! | ACAATTACTGAAATACTACA+AGG | - | chr1.3:19125160-19125179 | MS.gene061688:intron | 25.0% |
| ! | ACTATAATCCAAGTTAGTTA+AGG | + | chr1.3:19125291-19125310 | None:intergenic | 25.0% |
| ! | ACTTGACAATGCATTTAATT+AGG | - | chr1.3:19120747-19120766 | MS.gene061688:intron | 25.0% |
| ! | ATGAACCTATAAAAAAGATG+AGG | + | chr1.3:19120955-19120974 | None:intergenic | 25.0% |
| ! | ATGTTTATGTATTTCACTTC+AGG | - | chr1.3:19120413-19120432 | MS.gene061688:CDS | 25.0% |
| ! | ATTCTTAATAATGACACCTT+TGG | + | chr1.3:19122748-19122767 | None:intergenic | 25.0% |
| ! | GTTCTTCAAATCTTAAAAGT+AGG | - | chr1.3:19122202-19122221 | MS.gene061688:intron | 25.0% |
| ! | TATGAACTCTAATCAGATAT+TGG | - | chr1.3:19125357-19125376 | MS.gene061688:CDS | 25.0% |
| ! | TATGGGAAAAAAATGTTCTA+TGG | + | chr1.3:19122136-19122155 | None:intergenic | 25.0% |
| ! | TCAAATTGATGAACTATATG+AGG | - | chr1.3:19125434-19125453 | MS.gene061688:CDS | 25.0% |
| ! | TGAAGTTCTTTATACAAACA+AGG | + | chr1.3:19120365-19120384 | None:intergenic | 25.0% |
| ! | TGAGACAACTTGAATAATAT+AGG | + | chr1.3:19124457-19124476 | None:intergenic | 25.0% |
| ! | TGTCTATTGACCAAATTATT+AGG | - | chr1.3:19122790-19122809 | MS.gene061688:CDS | 25.0% |
| ! | TGTTTATGTATTTCACTTCA+GGG | - | chr1.3:19120414-19120433 | MS.gene061688:CDS | 25.0% |
| ! | TTCCTATCAGTATTCAAATT+AGG | - | chr1.3:19122574-19122593 | MS.gene061688:intron | 25.0% |
| ! | TTCTTAATAATGACACCTTT+GGG | + | chr1.3:19122747-19122766 | None:intergenic | 25.0% |
| ! | TTGTAGTATTTCAGTAATTG+TGG | + | chr1.3:19125161-19125180 | None:intergenic | 25.0% |
| !! | AACATTGAGTTTGAATTTTC+AGG | - | chr1.3:19121222-19121241 | MS.gene061688:CDS | 25.0% |
| !! | ACTATATGCTTTTCAAATGT+AGG | - | chr1.3:19123577-19123596 | MS.gene061688:intron | 25.0% |
| !! | CAAGTGTTTCATTTAGTTTA+TGG | - | chr1.3:19120240-19120259 | MS.gene061688:intron | 25.0% |
| !! | CATATACTGTTTCTCATAAA+AGG | + | chr1.3:19124109-19124128 | None:intergenic | 25.0% |
| !! | TTTGTAGTATAAAGTGCTAT+AGG | + | chr1.3:19125232-19125251 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATGATTTTCA+TGG | + | chr1.3:19124558-19124577 | None:intergenic | 25.0% |
| !!! | ATATCTTAACTTGCTGTTAA+TGG | + | chr1.3:19123735-19123754 | None:intergenic | 25.0% |
| !!! | TAACATTTTGAAATCATTGC+AGG | - | chr1.3:19124503-19124522 | MS.gene061688:intron | 25.0% |
| !!! | TATTATTCAAGTTGTCTCAT+TGG | - | chr1.3:19124458-19124477 | MS.gene061688:intron | 25.0% |
| AAAGAACAAGAACATACTGA+TGG | + | chr1.3:19122055-19122074 | None:intergenic | 30.0% | |
| AACACAAGTCTATCAAAGAA+AGG | + | chr1.3:19123791-19123810 | None:intergenic | 30.0% | |
| AAGTTAGAAAAGACATACCA+AGG | + | chr1.3:19121660-19121679 | None:intergenic | 30.0% | |
| ACAGCAAATCTTTATATTGC+GGG | - | chr1.3:19122444-19122463 | MS.gene061688:intron | 30.0% | |
| AGTCATAGTGTATTAGATTG+CGG | - | chr1.3:19122411-19122430 | MS.gene061688:intron | 30.0% | |
| AGTTAGAAAAGACATACCAA+GGG | + | chr1.3:19121659-19121678 | None:intergenic | 30.0% | |
| AGTTTCAATTGCATTTGTAC+AGG | - | chr1.3:19122018-19122037 | MS.gene061688:intron | 30.0% | |
| ATTATCACAAGGATATGGTA+TGG | - | chr1.3:19123998-19124017 | MS.gene061688:CDS | 30.0% | |
| CAAGTTAAGATATCTAGAGA+AGG | - | chr1.3:19123742-19123761 | MS.gene061688:intron | 30.0% | |
| CACAGCAAATCTTTATATTG+CGG | - | chr1.3:19122443-19122462 | MS.gene061688:intron | 30.0% | |
| CATAAATGCATCTATAGACA+GGG | + | chr1.3:19120091-19120110 | None:intergenic | 30.0% | |
| CATTTCAAACATATCCTAAC+AGG | - | chr1.3:19121959-19121978 | MS.gene061688:intron | 30.0% | |
| CTATCAAAACTTAGCAGAAT+AGG | + | chr1.3:19124987-19125006 | None:intergenic | 30.0% | |
| CTCAATGTTGTCACATTTAA+CGG | - | chr1.3:19122078-19122097 | MS.gene061688:CDS | 30.0% | |
| CTCCTAATTTGAATACTGAT+AGG | + | chr1.3:19122579-19122598 | None:intergenic | 30.0% | |
| GAAGTTTATATGGTTTCCTT+TGG | - | chr1.3:19121022-19121041 | MS.gene061688:intron | 30.0% | |
| GGTCTCTTCAATTTAAATGT+TGG | + | chr1.3:19125140-19125159 | None:intergenic | 30.0% | |
| GTACATTATTGTGCAAATGT+CGG | + | chr1.3:19122703-19122722 | None:intergenic | 30.0% | |
| TATGATGTTTCCATCCAAAT+GGG | - | chr1.3:19121280-19121299 | MS.gene061688:CDS | 30.0% | |
| TATTATGTTGGAGCAGTTTA+AGG | - | chr1.3:19120293-19120312 | MS.gene061688:intron | 30.0% | |
| TGACAATGCATTTAATTAGG+TGG | - | chr1.3:19120750-19120769 | MS.gene061688:intron | 30.0% | |
| TGATAGACTTGTGTTTGATA+AGG | - | chr1.3:19123796-19123815 | MS.gene061688:intron | 30.0% | |
| TGATTTATTCCTAGCAATTG+AGG | - | chr1.3:19124420-19124439 | MS.gene061688:CDS | 30.0% | |
| TGTATTCAGATTTGGGTATA+TGG | - | chr1.3:19124763-19124782 | MS.gene061688:intron | 30.0% | |
| TGTCTGTCAACCTAATAATT+TGG | + | chr1.3:19122803-19122822 | None:intergenic | 30.0% | |
| TGTGTTTATGTATGAGCTTA+TGG | + | chr1.3:19121901-19121920 | None:intergenic | 30.0% | |
| TTATATGTGAGCCATGAATA+AGG | + | chr1.3:19121253-19121272 | None:intergenic | 30.0% | |
| TTATGATGTTTCCATCCAAA+TGG | - | chr1.3:19121279-19121298 | MS.gene061688:CDS | 30.0% | |
| TTCTCTGTGTATTCAGATTT+GGG | - | chr1.3:19124756-19124775 | MS.gene061688:intron | 30.0% | |
| TTTAAGGACAATCCTTTCTT+AGG | - | chr1.3:19120309-19120328 | MS.gene061688:intron | 30.0% | |
| TTTCTCTGTGTATTCAGATT+TGG | - | chr1.3:19124755-19124774 | MS.gene061688:intron | 30.0% | |
| ! | AAAGGCAAGACAATACATTT+TGG | - | chr1.3:19124900-19124919 | MS.gene061688:intron | 30.0% |
| ! | AGCAAAAAAGTACATGTAAC+TGG | - | chr1.3:19121387-19121406 | MS.gene061688:intron | 30.0% |
| ! | CACAAAACTCTTTAGTGTTT+TGG | - | chr1.3:19123678-19123697 | MS.gene061688:intron | 30.0% |
| ! | CCTTTCTTTTCTGTTCTTTA+GGG | - | chr1.3:19122642-19122661 | MS.gene061688:intron | 30.0% |
| ! | TCCTTTCTTTTCTGTTCTTT+AGG | - | chr1.3:19122641-19122660 | MS.gene061688:intron | 30.0% |
| ! | TCTTGTTTCCTTAACTAACT+TGG | - | chr1.3:19125280-19125299 | MS.gene061688:intron | 30.0% |
| ! | TGAACTCTTTTTGCAAAGTT+TGG | - | chr1.3:19123836-19123855 | MS.gene061688:CDS | 30.0% |
| ! | TTAAGTTGTTTATCCAAGCA+AGG | + | chr1.3:19121697-19121716 | None:intergenic | 30.0% |
| ! | TTCTAACTTCACAGTTGTTT+TGG | - | chr1.3:19121671-19121690 | MS.gene061688:intron | 30.0% |
| !! | AGAAATCACATTAGCTTGTT+TGG | + | chr1.3:19121934-19121953 | None:intergenic | 30.0% |
| !! | ATAAAGATTTGCTGTGTAAC+CGG | + | chr1.3:19122439-19122458 | None:intergenic | 30.0% |
| !!! | AAACAGTTTTGAGTCATTCT+TGG | - | chr1.3:19124786-19124805 | MS.gene061688:intron | 30.0% |
| !!! | CAAATGTCGGTTTTCTTTTT+TGG | + | chr1.3:19122690-19122709 | None:intergenic | 30.0% |
| AAAAGCAAAGTTTCATCTGC+TGG | - | chr1.3:19123604-19123623 | MS.gene061688:intron | 35.0% | |
| AAACAGAAATCCACTTACCT+TGG | - | chr1.3:19124709-19124728 | MS.gene061688:intron | 35.0% | |
| AAAGCAAAGTTTCATCTGCT+GGG | - | chr1.3:19123605-19123624 | MS.gene061688:intron | 35.0% | |
| AAGAAGGTGAAAACAGTTTG+TGG | - | chr1.3:19120621-19120640 | MS.gene061688:CDS | 35.0% | |
| AAGAATGAAGCTGAGGAATT+TGG | - | chr1.3:19122348-19122367 | MS.gene061688:intron | 35.0% | |
| AAGCATACCGATGATATAAG+AGG | + | chr1.3:19124653-19124672 | None:intergenic | 35.0% | |
| ACTCAAGAGGTTATAGTTGA+TGG | - | chr1.3:19124377-19124396 | MS.gene061688:intron | 35.0% | |
| AGAGAGAATGTTGAAAGAGA+AGG | + | chr1.3:19121354-19121373 | None:intergenic | 35.0% | |
| AGATCTCTCTCTATGTCAAA+GGG | + | chr1.3:19125110-19125129 | None:intergenic | 35.0% | |
| AGATGCATTTATGCCAAAGA+TGG | - | chr1.3:19120098-19120117 | MS.gene061688:intron | 35.0% | |
| AGCATACCGATGATATAAGA+GGG | + | chr1.3:19124652-19124671 | None:intergenic | 35.0% | |
| ATACACTATGACTTACCAAC+TGG | + | chr1.3:19122404-19122423 | None:intergenic | 35.0% | |
| ATCAACTATTGAAGCAACCA+AGG | + | chr1.3:19124729-19124748 | None:intergenic | 35.0% | |
| ATGATAAACTCCACAGCATT+AGG | + | chr1.3:19121986-19122005 | None:intergenic | 35.0% | |
| ATGCAATTGAAACTTCAGCA+TGG | + | chr1.3:19122012-19122031 | None:intergenic | 35.0% | |
| CAAACAAACACACCTTAATC+TGG | + | chr1.3:19122258-19122277 | None:intergenic | 35.0% | |
| CAACTATAACCTCTTGAGTA+AGG | + | chr1.3:19124376-19124395 | None:intergenic | 35.0% | |
| CAGTATTCAAATTAGGAGCA+TGG | - | chr1.3:19122581-19122600 | MS.gene061688:intron | 35.0% | |
| CCCTAAAGAACAGAAAAGAA+AGG | + | chr1.3:19122645-19122664 | None:intergenic | 35.0% | |
| CCTTTCTTAGGAAAAACTGA+AGG | - | chr1.3:19120321-19120340 | MS.gene061688:CDS | 35.0% | |
| CTAATACGATCGAAAACTCT+AGG | + | chr1.3:19123440-19123459 | None:intergenic | 35.0% | |
| CTGATAGGAAGATGAAAACA+AGG | + | chr1.3:19122564-19122583 | None:intergenic | 35.0% | |
| GAACTATATGAGGAAGCAAA+AGG | - | chr1.3:19125444-19125463 | MS.gene061688:CDS | 35.0% | |
| GCATAAATGCATCTATAGAC+AGG | + | chr1.3:19120092-19120111 | None:intergenic | 35.0% | |
| GGAACACCACAAAATATAGT+CGG | + | chr1.3:19123419-19123438 | None:intergenic | 35.0% | |
| GGTTTATACTGTGAAAGTTG+AGG | - | chr1.3:19120025-19120044 | MS.gene061688:CDS | 35.0% | |
| TAGATCTCTCTCTATGTCAA+AGG | + | chr1.3:19125111-19125130 | None:intergenic | 35.0% | |
| TATACTGTGAAAGTTGAGGA+AGG | - | chr1.3:19120029-19120048 | MS.gene061688:CDS | 35.0% | |
| TCATGTATACGACCAGATAA+TGG | - | chr1.3:19123213-19123232 | MS.gene061688:intron | 35.0% | |
| TCCACATTATCACAAGGATA+TGG | - | chr1.3:19123993-19124012 | MS.gene061688:CDS | 35.0% | |
| TGCACAATAATGTACACAAG+TGG | - | chr1.3:19122708-19122727 | MS.gene061688:CDS | 35.0% | |
| TTATATGGTTTCCTTTGGCA+GGG | - | chr1.3:19121027-19121046 | MS.gene061688:intron | 35.0% | |
| TTATATTGTGGCCACAATTG+CGG | - | chr1.3:19122521-19122540 | MS.gene061688:intron | 35.0% | |
| TTATCTCTCAGTCCAGATTA+AGG | - | chr1.3:19122243-19122262 | MS.gene061688:CDS | 35.0% | |
| TTCATGGCTCACATATAAAG+AGG | - | chr1.3:19121255-19121274 | MS.gene061688:CDS | 35.0% | |
| TTCTCTTTCAACATTCTCTC+TGG | - | chr1.3:19121353-19121372 | MS.gene061688:intron | 35.0% | |
| TTTATATGGTTTCCTTTGGC+AGG | - | chr1.3:19121026-19121045 | MS.gene061688:intron | 35.0% | |
| ! | ACCATATCCTTGTGATAATG+TGG | + | chr1.3:19123997-19124016 | None:intergenic | 35.0% |
| ! | AGATTTTGTCATGCCTTGAT+CGG | - | chr1.3:19122178-19122197 | MS.gene061688:intron | 35.0% |
| ! | ATGATTTTCATGGCTCCATT+TGG | + | chr1.3:19124548-19124567 | None:intergenic | 35.0% |
| ! | CCTTCAGTTTTTCCTAAGAA+AGG | + | chr1.3:19120324-19120343 | None:intergenic | 35.0% |
| ! | CTGAAACCGACTATATTTTG+TGG | - | chr1.3:19123410-19123429 | MS.gene061688:intron | 35.0% |
| ! | GCAGTTGAGCACAATTTTAA+TGG | - | chr1.3:19124850-19124869 | MS.gene061688:intron | 35.0% |
| ! | TCTTTAGGGAAGTTTGGATT+GGG | - | chr1.3:19122656-19122675 | MS.gene061688:intron | 35.0% |
| ! | TTATGCCAAAGATGGTCTTA+TGG | - | chr1.3:19120106-19120125 | MS.gene061688:intron | 35.0% |
| ! | TTCTGTTCTTTAGGGAAGTT+TGG | - | chr1.3:19122650-19122669 | MS.gene061688:intron | 35.0% |
| ! | TTCTTTAGGGAAGTTTGGAT+TGG | - | chr1.3:19122655-19122674 | MS.gene061688:intron | 35.0% |
| !! | AACTTGCTGTTAATGGATTC+TGG | + | chr1.3:19123728-19123747 | None:intergenic | 35.0% |
| !! | AAGAGGTTATAGTTGATGGT+TGG | - | chr1.3:19124381-19124400 | MS.gene061688:intron | 35.0% |
| !! | TATTAGGTTGACAGACAAAG+TGG | - | chr1.3:19122806-19122825 | MS.gene061688:CDS | 35.0% |
| !! | TGTGTTTTCTATGATGGGAA+CGG | - | chr1.3:19124211-19124230 | MS.gene061688:CDS | 35.0% |
| !! | TTGAGTTTGAATTTTCAGGC+AGG | - | chr1.3:19121226-19121245 | MS.gene061688:CDS | 35.0% |
| !!! | ATGTCGGTTTTCTTTTTTGG+TGG | + | chr1.3:19122687-19122706 | None:intergenic | 35.0% |
| !!! | ATTTTTGGTCTTAATCCTCC+CGG | + | chr1.3:19120551-19120570 | None:intergenic | 35.0% |
| !!! | CGAGTCCTCATCTTTTTTAT+AGG | - | chr1.3:19120947-19120966 | MS.gene061688:CDS | 35.0% |
| AAACACTCCTCCACATGAAT+AGG | + | chr1.3:19123957-19123976 | None:intergenic | 40.0% | |
| AATGATCCATTCAGGACAGT+TGG | + | chr1.3:19121499-19121518 | None:intergenic | 40.0% | |
| AGTGGATCCACATTATCACA+AGG | - | chr1.3:19123987-19124006 | MS.gene061688:CDS | 40.0% | |
| AGTGTATTAGATTGCGGTTC+CGG | - | chr1.3:19122417-19122436 | MS.gene061688:intron | 40.0% | |
| ATACCAAGGGAGTCATATAG+TGG | + | chr1.3:19121646-19121665 | None:intergenic | 40.0% | |
| ATCGTGACTGGATCAATCAT+TGG | - | chr1.3:19120465-19120484 | MS.gene061688:intron | 40.0% | |
| ATCTGAGTTTGAATCGTGAC+TGG | - | chr1.3:19120453-19120472 | MS.gene061688:intron | 40.0% | |
| ATGAAACTCTCTCAGCTTAG+AGG | - | chr1.3:19125047-19125066 | MS.gene061688:intron | 40.0% | |
| ATGTACACAAGTGGAACAAC+AGG | - | chr1.3:19122717-19122736 | MS.gene061688:CDS | 40.0% | |
| ATTGAAGCAACCAAGGTAAG+TGG | + | chr1.3:19124722-19124741 | None:intergenic | 40.0% | |
| ATTGGAGAATGGCAACCAAA+TGG | - | chr1.3:19124530-19124549 | MS.gene061688:intron | 40.0% | |
| CAACTCCATAAGACCATCTT+TGG | + | chr1.3:19120114-19120133 | None:intergenic | 40.0% | |
| CAAGTGCTTGAACGTCATTA+GGG | + | chr1.3:19120732-19120751 | None:intergenic | 40.0% | |
| CACACAAAAGAATGAAGCTG+AGG | - | chr1.3:19122341-19122360 | MS.gene061688:intron | 40.0% | |
| CACTTCAGGGAAAAATGTTC+AGG | - | chr1.3:19120427-19120446 | MS.gene061688:intron | 40.0% | |
| CCAGACTTTACTTATCTCCT+AGG | - | chr1.3:19120488-19120507 | MS.gene061688:intron | 40.0% | |
| CCTAGGAGATAAGTAAAGTC+TGG | + | chr1.3:19120491-19120510 | None:intergenic | 40.0% | |
| CTCTCTATGTCAAAGGGAAT+TGG | + | chr1.3:19125104-19125123 | None:intergenic | 40.0% | |
| CTTATCTCCTAGGCAAACTT+TGG | - | chr1.3:19120498-19120517 | MS.gene061688:intron | 40.0% | |
| CTTCCAAGCATTTGGTTGTT+GGG | + | chr1.3:19121070-19121089 | None:intergenic | 40.0% | |
| CTTGAATCTGTACCAGAGAT+GGG | - | chr1.3:19124266-19124285 | MS.gene061688:intron | 40.0% | |
| CTTGTGATAACCAGAGAACA+AGG | + | chr1.3:19124345-19124364 | None:intergenic | 40.0% | |
| CTTTATTCTTGCAGGATGTC+AGG | - | chr1.3:19123363-19123382 | MS.gene061688:intron | 40.0% | |
| CTTTGCGATAATTGCTTTGC+AGG | - | chr1.3:19125410-19125429 | MS.gene061688:CDS | 40.0% | |
| GAAATCATTGCAGGCGATAT+TGG | - | chr1.3:19124512-19124531 | MS.gene061688:intron | 40.0% | |
| GATTTGAAGAACACCGATCA+AGG | + | chr1.3:19122194-19122213 | None:intergenic | 40.0% | |
| GCAATGCCCTCTTATATCAT+CGG | - | chr1.3:19124643-19124662 | MS.gene061688:intron | 40.0% | |
| GCAGCTCAAAGCTATTTATC+TGG | - | chr1.3:19125076-19125095 | MS.gene061688:intron | 40.0% | |
| GCGTCAAAAACTCGATTCTA+AGG | - | chr1.3:19121090-19121109 | MS.gene061688:CDS | 40.0% | |
| GTTGTAGCTATTGTGAGCTT+TGG | - | chr1.3:19122306-19122325 | MS.gene061688:CDS | 40.0% | |
| TAACTGCAATTTCGACCACA+TGG | + | chr1.3:19122479-19122498 | None:intergenic | 40.0% | |
| TACATGAGCAAGAGGAAGAA+AGG | + | chr1.3:19123200-19123219 | None:intergenic | 40.0% | |
| TCAAGTGCTTGAACGTCATT+AGG | + | chr1.3:19120733-19120752 | None:intergenic | 40.0% | |
| TCCATTGCAATGATCCATTC+AGG | + | chr1.3:19121507-19121526 | None:intergenic | 40.0% | |
| TCCTGAATGGATCATTGCAA+TGG | - | chr1.3:19121503-19121522 | MS.gene061688:CDS | 40.0% | |
| TGAATGGATCATTGCAATGG+AGG | - | chr1.3:19121506-19121525 | MS.gene061688:CDS | 40.0% | |
| TGAGGAAGCAAAAGGAACAA+AGG | - | chr1.3:19125452-19125471 | MS.gene061688:CDS | 40.0% | |
| TGGTAATCCAAAGTTTGCCT+AGG | + | chr1.3:19120508-19120527 | None:intergenic | 40.0% | |
| TTCCAAGCATTTGGTTGTTG+GGG | + | chr1.3:19121069-19121088 | None:intergenic | 40.0% | |
| ! | AAGCATTGTGTTCTGATGCA+TGG | + | chr1.3:19125334-19125353 | None:intergenic | 40.0% |
| ! | CTCAGCTTCATTCTTTTGTG+TGG | + | chr1.3:19122343-19122362 | None:intergenic | 40.0% |
| ! | GGCGATGTGTTTTCTATGAT+GGG | - | chr1.3:19124206-19124225 | MS.gene061688:CDS | 40.0% |
| ! | GTTTTCGATCGTATTAGTGC+TGG | - | chr1.3:19123443-19123462 | MS.gene061688:CDS | 40.0% |
| ! | TTGGATGAGCTTAAAAGCAC+TGG | - | chr1.3:19124919-19124938 | MS.gene061688:intron | 40.0% |
| !! | GTTGATGGTTGGTTTCATAC+AGG | - | chr1.3:19124392-19124411 | MS.gene061688:CDS | 40.0% |
| !! | TGTCTCATTGGCTCTAAATG+CGG | - | chr1.3:19124470-19124489 | MS.gene061688:intron | 40.0% |
| !! | TTTTCTATGATGGGAACGGT+TGG | - | chr1.3:19124215-19124234 | MS.gene061688:CDS | 40.0% |
| !!! | CAGTTTTGAGTCATTCTTGG+TGG | - | chr1.3:19124789-19124808 | MS.gene061688:intron | 40.0% |
| AATTCCCATGACAACCATCG+AGG | - | chr1.3:19124238-19124257 | MS.gene061688:intron | 45.0% | |
| ACAGAAAGGCTCTTGAGGAT+TGG | - | chr1.3:19124827-19124846 | MS.gene061688:intron | 45.0% | |
| AGAACAAGGAGTTTCCTCTC+AGG | + | chr1.3:19124331-19124350 | None:intergenic | 45.0% | |
| AGAGGAAACTCCTTGTTCTC+TGG | - | chr1.3:19124332-19124351 | MS.gene061688:intron | 45.0% | |
| AGATGAGGACTCGTAGAACA+TGG | + | chr1.3:19120940-19120959 | None:intergenic | 45.0% | |
| AGGAACTGCTGAAAACTCAC+AGG | + | chr1.3:19121334-19121353 | None:intergenic | 45.0% | |
| AGTGACCTGAAGAAATCCCA+AGG | + | chr1.3:19120155-19120174 | None:intergenic | 45.0% | |
| ATCCTCAAGAGCCTTTCTGT+CGG | + | chr1.3:19124827-19124846 | None:intergenic | 45.0% | |
| ATCTTCAAGGGATCCGCAAT+AGG | - | chr1.3:19123247-19123266 | MS.gene061688:intron | 45.0% | |
| CAGAAAGGCTCTTGAGGATT+GGG | - | chr1.3:19124828-19124847 | MS.gene061688:intron | 45.0% | |
| CCAACAACCAAATGCTTGGA+AGG | - | chr1.3:19121068-19121087 | MS.gene061688:intron | 45.0% | |
| CCTTCCAAGCATTTGGTTGT+TGG | + | chr1.3:19121071-19121090 | None:intergenic | 45.0% | |
| CTGTGAAAGTTGAGGAAGGA+AGG | - | chr1.3:19120033-19120052 | MS.gene061688:CDS | 45.0% | |
| CTTAACAGAATCCCTGCCAA+AGG | + | chr1.3:19121041-19121060 | None:intergenic | 45.0% | |
| GAGTGTTTGAGAGTCACTAG+TGG | - | chr1.3:19123969-19123988 | MS.gene061688:CDS | 45.0% | |
| GCCTTGCCAAAATCCTATTG+CGG | + | chr1.3:19123263-19123282 | None:intergenic | 45.0% | |
| GCGACCTATTGCATCTTCAA+GGG | - | chr1.3:19123235-19123254 | MS.gene061688:intron | 45.0% | |
| GCTTGAATCTGTACCAGAGA+TGG | - | chr1.3:19124265-19124284 | MS.gene061688:intron | 45.0% | |
| GGAGATCACTGTGGCATATA+TGG | - | chr1.3:19121471-19121490 | MS.gene061688:intron | 45.0% | |
| GGATCCCTTGAAGATGCAAT+AGG | + | chr1.3:19123242-19123261 | None:intergenic | 45.0% | |
| GTCTTACTGAAAGCTGTGCT+GGG | - | chr1.3:19124168-19124187 | MS.gene061688:CDS | 45.0% | |
| GTGACCTGAAGAAATCCCAA+GGG | + | chr1.3:19120154-19120173 | None:intergenic | 45.0% | |
| GTGTCTGAACATCTTCAAGC+AGG | + | chr1.3:19123391-19123410 | None:intergenic | 45.0% | |
| GTTCCACTATATGACTCCCT+TGG | - | chr1.3:19121640-19121659 | MS.gene061688:intron | 45.0% | |
| TACCAGAGCCCTCTTTCTAT+GGG | - | chr1.3:19120523-19120542 | MS.gene061688:intron | 45.0% | |
| TAGACAAAACAAGCGCTAGG+TGG | - | chr1.3:19123894-19123913 | MS.gene061688:intron | 45.0% | |
| TCACATGTGCCTCAATTGCT+AGG | + | chr1.3:19124432-19124451 | None:intergenic | 45.0% | |
| TCCTCCACATGAATAGGCAA+AGG | + | chr1.3:19123951-19123970 | None:intergenic | 45.0% | |
| TGACCTGAAGAAATCCCAAG+GGG | + | chr1.3:19120153-19120172 | None:intergenic | 45.0% | |
| TGCAATAGGTCGCCATTATC+TGG | + | chr1.3:19123228-19123247 | None:intergenic | 45.0% | |
| TGCTTGAACGTCATTAGGGT+CGG | + | chr1.3:19120728-19120747 | None:intergenic | 45.0% | |
| TGGTAGACAAAACAAGCGCT+AGG | - | chr1.3:19123891-19123910 | MS.gene061688:intron | 45.0% | |
| TGGTCGTATACATGAGCAAG+AGG | + | chr1.3:19123208-19123227 | None:intergenic | 45.0% | |
| TGTTACTAGGGAGATCACTG+TGG | - | chr1.3:19121462-19121481 | MS.gene061688:intron | 45.0% | |
| TTACCAGAGCCCTCTTTCTA+TGG | - | chr1.3:19120522-19120541 | MS.gene061688:intron | 45.0% | |
| TTCAGGCAGGACCTTATTCA+TGG | - | chr1.3:19121239-19121258 | MS.gene061688:CDS | 45.0% | |
| TTGCAGGCGATATTGGAGAA+TGG | - | chr1.3:19124519-19124538 | MS.gene061688:intron | 45.0% | |
| TTGGCAGGGATTCTGTTAAG+AGG | - | chr1.3:19121041-19121060 | MS.gene061688:intron | 45.0% | |
| TTTGACGCCTTCCAAGCATT+TGG | + | chr1.3:19121078-19121097 | None:intergenic | 45.0% | |
| ! | AGGGATCCGCAATAGGATTT+TGG | - | chr1.3:19123254-19123273 | MS.gene061688:intron | 45.0% |
| ! | CGGCGATGTGTTTTCTATGA+TGG | - | chr1.3:19124205-19124224 | MS.gene061688:CDS | 45.0% |
| ! | GCAAAAGGAACAAAGGCATG+AGG | - | chr1.3:19125459-19125478 | MS.gene061688:CDS | 45.0% |
| !! | AAAGGTGCTGCTTTGTGTTG+TGG | + | chr1.3:19123773-19123792 | None:intergenic | 45.0% |
| !! | TCCGCAATAGGATTTTGGCA+AGG | - | chr1.3:19123259-19123278 | MS.gene061688:intron | 45.0% |
| !! | TTCTGGTTTAGAGTCCCCTT+GGG | - | chr1.3:19120136-19120155 | MS.gene061688:intron | 45.0% |
| !!! | ACAGTTGTTTTGGCCTTGCT+TGG | - | chr1.3:19121681-19121700 | MS.gene061688:CDS | 45.0% |
| !!! | TTTTATAAAATCAATATTTT+TGG | + | chr1.3:19120566-19120585 | None:intergenic | 5.0% |
| AACTCACAGGATTGACGCCA+CGG | + | chr1.3:19121321-19121340 | None:intergenic | 50.0% | |
| AGCCCCAACAACCAAATGCT+TGG | - | chr1.3:19121064-19121083 | MS.gene061688:intron | 50.0% | |
| AGCCCTCTTTCTATGGGATC+CGG | - | chr1.3:19120529-19120548 | MS.gene061688:intron | 50.0% | |
| AGTCCCCTTGGGATTTCTTC+AGG | - | chr1.3:19120147-19120166 | MS.gene061688:intron | 50.0% | |
| AGTGCGTCATATCCCATCTC+TGG | + | chr1.3:19124281-19124300 | None:intergenic | 50.0% | |
| ATCCCATAGAAAGAGGGCTC+TGG | + | chr1.3:19120528-19120547 | None:intergenic | 50.0% | |
| CAAGGGGACTCTAAACCAGA+AGG | + | chr1.3:19120137-19120156 | None:intergenic | 50.0% | |
| CCACAGCATTAGGACCTGTT+AGG | + | chr1.3:19121976-19121995 | None:intergenic | 50.0% | |
| CCTAACAGGTCCTAATGCTG+TGG | - | chr1.3:19121973-19121992 | MS.gene061688:intron | 50.0% | |
| CGCGTTCGTATCCTGTTATC+CGG | - | chr1.3:19123918-19123937 | MS.gene061688:intron | 50.0% | |
| CTATAGACAGGGCCTACTGA+TGG | + | chr1.3:19120080-19120099 | None:intergenic | 50.0% | |
| CTCTGGTACAGATTCAAGCC+TGG | + | chr1.3:19124264-19124283 | None:intergenic | 50.0% | |
| GCCTTTGCCTATTCATGTGG+AGG | - | chr1.3:19123947-19123966 | MS.gene061688:intron | 50.0% | |
| GCGACAAGACCTTACTCAAG+AGG | - | chr1.3:19124364-19124383 | MS.gene061688:intron | 50.0% | |
| GCTGGGTGTTTCACAGCAAT+CGG | - | chr1.3:19124185-19124204 | MS.gene061688:CDS | 50.0% | |
| GGAACAACAGGAGAACCCAA+AGG | - | chr1.3:19122729-19122748 | MS.gene061688:CDS | 50.0% | |
| GGCGACCTATTGCATCTTCA+AGG | - | chr1.3:19123234-19123253 | MS.gene061688:intron | 50.0% | |
| GGTCTTACTGAAAGCTGTGC+TGG | - | chr1.3:19124167-19124186 | MS.gene061688:CDS | 50.0% | |
| TCCCGGATCCCATAGAAAGA+GGG | + | chr1.3:19120534-19120553 | None:intergenic | 50.0% | |
| TCCTCAAGAGCCTTTCTGTC+GGG | + | chr1.3:19124826-19124845 | None:intergenic | 50.0% | |
| TCTGATGGAAGGCCATCAGT+AGG | - | chr1.3:19120065-19120084 | MS.gene061688:intron | 50.0% | |
| TGCGCCTTTGCCTATTCATG+TGG | - | chr1.3:19123944-19123963 | MS.gene061688:intron | 50.0% | |
| TGCGGGAATATACGACCATG+TGG | - | chr1.3:19122461-19122480 | MS.gene061688:intron | 50.0% | |
| TTCTCATGGCTGAGCCCATT+TGG | + | chr1.3:19121297-19121316 | None:intergenic | 50.0% | |
| ! | ATGGTGCCAACTGTCCTGAA+TGG | - | chr1.3:19121490-19121509 | MS.gene061688:CDS | 50.0% |
| ! | GGTCTTATGGAGTTGCCTTC+TGG | - | chr1.3:19120119-19120138 | MS.gene061688:intron | 50.0% |
| ! | TGAGTCATTCTTGGTGGCTG+TGG | - | chr1.3:19124795-19124814 | MS.gene061688:intron | 50.0% |
| !! | CTTCTGGTTTAGAGTCCCCT+TGG | - | chr1.3:19120135-19120154 | MS.gene061688:intron | 50.0% |
| AAACTCTCCCCAGGAGAAGC+AGG | + | chr1.3:19122379-19122398 | None:intergenic | 55.0% | |
| AGATTCAAGCCTGGCCTCGA+TGG | + | chr1.3:19124255-19124274 | None:intergenic | 55.0% | |
| ATTGACGCCACGGCTTCTCA+TGG | + | chr1.3:19121311-19121330 | None:intergenic | 55.0% | |
| CAACTGGAGAAACTCTCCCC+AGG | + | chr1.3:19122388-19122407 | None:intergenic | 55.0% | |
| CATGGCTGAGCCCATTTGGA+TGG | + | chr1.3:19121293-19121312 | None:intergenic | 55.0% | |
| CCTCAAGAGCCTTTCTGTCG+GGG | + | chr1.3:19124825-19124844 | None:intergenic | 55.0% | |
| CTCCCGGATCCCATAGAAAG+AGG | + | chr1.3:19120535-19120554 | None:intergenic | 55.0% | |
| CTCTTTCTATGGGATCCGGG+AGG | - | chr1.3:19120533-19120552 | MS.gene061688:intron | 55.0% | |
| CTGGCCTCGATGGTTGTCAT+GGG | + | chr1.3:19124245-19124264 | None:intergenic | 55.0% | |
| CTGGGGAGAGTTTCTCCAGT+TGG | - | chr1.3:19122386-19122405 | MS.gene061688:intron | 55.0% | |
| GCCCTCTTTCTATGGGATCC+GGG | - | chr1.3:19120530-19120549 | MS.gene061688:intron | 55.0% | |
| GGAAGGCCTGCTACATCTGA+TGG | - | chr1.3:19120050-19120069 | MS.gene061688:intron | 55.0% | |
| GGCCTGCTACATCTGATGGA+AGG | - | chr1.3:19120054-19120073 | MS.gene061688:intron | 55.0% | |
| GGCCTTCCATCAGATGTAGC+AGG | + | chr1.3:19120059-19120078 | None:intergenic | 55.0% | |
| TGGCACATCCTGCTTCTCCT+GGG | - | chr1.3:19122368-19122387 | MS.gene061688:intron | 55.0% | |
| TGTGGTAGTCCCCGACAGAA+AGG | - | chr1.3:19124813-19124832 | MS.gene061688:intron | 55.0% | |
| TTAGTCCGCAGCCGCAATTG+TGG | + | chr1.3:19122535-19122554 | None:intergenic | 55.0% | |
| TTGGCACATCCTGCTTCTCC+TGG | - | chr1.3:19122367-19122386 | MS.gene061688:intron | 55.0% | |
| ! | AATAGGCAAAGGCGCAGCTC+CGG | + | chr1.3:19123940-19123959 | None:intergenic | 55.0% |
| AAGGCGCAGCTCCGGATAAC+AGG | + | chr1.3:19123932-19123951 | None:intergenic | 60.0% | |
| CCATGACAACCATCGAGGCC+AGG | - | chr1.3:19124243-19124262 | MS.gene061688:intron | 60.0% | |
| CCCCGACAGAAAGGCTCTTG+AGG | - | chr1.3:19124822-19124841 | MS.gene061688:intron | 60.0% | |
| CCTGGCCTCGATGGTTGTCA+TGG | + | chr1.3:19124246-19124265 | None:intergenic | 60.0% | |
| GGCACATCCTGCTTCTCCTG+GGG | - | chr1.3:19122369-19122388 | MS.gene061688:intron | 60.0% | |
| TGTGGCCACAATTGCGGCTG+CGG | - | chr1.3:19122527-19122546 | MS.gene061688:intron | 60.0% | |
| GGCTCAGCCATGAGAAGCCG+TGG | - | chr1.3:19121301-19121320 | MS.gene061688:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 19120017 | 19125479 | 19120017 | ID=MS.gene061688 |
| chr1.3 | mRNA | 19120017 | 19125479 | 19120017 | ID=MS.gene061688.t1;Parent=MS.gene061688 |
| chr1.3 | exon | 19125328 | 19125479 | 19125328 | ID=MS.gene061688.t1.exon1;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19125328 | 19125479 | 19125328 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19124385 | 19124448 | 19124385 | ID=MS.gene061688.t1.exon2;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19124385 | 19124448 | 19124385 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19124163 | 19124252 | 19124163 | ID=MS.gene061688.t1.exon3;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19124163 | 19124252 | 19124163 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19123969 | 19124025 | 19123969 | ID=MS.gene061688.t1.exon4;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19123969 | 19124025 | 19123969 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19123835 | 19123883 | 19123835 | ID=MS.gene061688.t1.exon5;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19123835 | 19123883 | 19123835 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19123439 | 19123515 | 19123439 | ID=MS.gene061688.t1.exon6;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19123439 | 19123515 | 19123439 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19123277 | 19123316 | 19123277 | ID=MS.gene061688.t1.exon7;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19123277 | 19123316 | 19123277 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19123089 | 19123183 | 19123089 | ID=MS.gene061688.t1.exon8;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19123089 | 19123183 | 19123089 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19122669 | 19122833 | 19122669 | ID=MS.gene061688.t1.exon9;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19122669 | 19122833 | 19122669 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19122214 | 19122330 | 19122214 | ID=MS.gene061688.t1.exon10;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19122214 | 19122330 | 19122214 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19122032 | 19122119 | 19122032 | ID=MS.gene061688.t1.exon11;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19122032 | 19122119 | 19122032 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19121831 | 19121897 | 19121831 | ID=MS.gene061688.t1.exon12;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19121831 | 19121897 | 19121831 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19121679 | 19121754 | 19121679 | ID=MS.gene061688.t1.exon13;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19121679 | 19121754 | 19121679 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19121482 | 19121599 | 19121482 | ID=MS.gene061688.t1.exon14;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19121482 | 19121599 | 19121482 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19121083 | 19121328 | 19121083 | ID=MS.gene061688.t1.exon15;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19121083 | 19121328 | 19121083 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19120832 | 19120971 | 19120832 | ID=MS.gene061688.t1.exon16;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19120832 | 19120971 | 19120832 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19120542 | 19120724 | 19120542 | ID=MS.gene061688.t1.exon17;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19120542 | 19120724 | 19120542 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19120315 | 19120434 | 19120315 | ID=MS.gene061688.t1.exon18;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19120315 | 19120434 | 19120315 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| chr1.3 | exon | 19120017 | 19120064 | 19120017 | ID=MS.gene061688.t1.exon19;Parent=MS.gene061688.t1 |
| chr1.3 | CDS | 19120017 | 19120064 | 19120017 | ID=cds.MS.gene061688.t1;Parent=MS.gene061688.t1 |
| Gene Sequence |
| Protein sequence |
