AlfalfaGEDB | MS.gene80714

M. sativa cultivar XinJiangDaYe / MS.gene80714

KEGG: K02977
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00240.26 PF01599.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80714.t1	XP_003613203.1	100	155	0	0	1	155	1	155	1.20E-65	259.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80714.t1	P62980	97.4	153	4	0	1	153	1	153	1.7e-65	250.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80714.t1	G7K080	100.0	155	0	0	1	155	1	155	8.6e-66	259.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050791	MS.gene80714	0.811422	7.06E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene061768	MS.gene80714	PPI
MS.gene89216	MS.gene80714	PPI
MS.gene80714	MS.gene53650	PPI
MS.gene023648	MS.gene80714	PPI
MS.gene008225	MS.gene80714	PPI
MS.gene027655	MS.gene80714	PPI
MS.gene64324	MS.gene80714	PPI
MS.gene024717	MS.gene80714	PPI
MS.gene53662	MS.gene80714	PPI
MS.gene96922	MS.gene80714	PPI
MS.gene21932	MS.gene80714	PPI
MS.gene21931	MS.gene80714	PPI
MS.gene63281	MS.gene80714	PPI
MS.gene96914	MS.gene80714	PPI
MS.gene53648	MS.gene80714	PPI
MS.gene68345	MS.gene80714	PPI
MS.gene017446	MS.gene80714	PPI
MS.gene44354	MS.gene80714	PPI
MS.gene64310	MS.gene80714	PPI
MS.gene53659	MS.gene80714	PPI
MS.gene000724	MS.gene80714	PPI
MS.gene036602	MS.gene80714	PPI
MS.gene96913	MS.gene80714	PPI
MS.gene04915	MS.gene80714	PPI
MS.gene64327	MS.gene80714	PPI
MS.gene53465	MS.gene80714	PPI
MS.gene80714	MS.gene64317	PPI
MS.gene065998	MS.gene80714	PPI
MS.gene001381	MS.gene80714	PPI
MS.gene64316	MS.gene80714	PPI
MS.gene80714	MS.gene29459	PPI
MS.gene62258	MS.gene80714	PPI
MS.gene64311	MS.gene80714	PPI
MS.gene27879	MS.gene80714	PPI
MS.gene80714	MS.gene21696	PPI
MS.gene64308	MS.gene80714	PPI
MS.gene64313	MS.gene80714	PPI
MS.gene000738	MS.gene80714	PPI
MS.gene64307	MS.gene80714	PPI
MS.gene80714	MS.gene64314	PPI
MS.gene04917	MS.gene80714	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80714.t1	MTR_5g033960	100.000	155	0	0	1	155	1	155	6.08e-114	319
MS.gene80714.t1	MTR_8g088060	99.355	155	1	0	1	155	1	155	2.15e-113	318
MS.gene80714.t1	MTR_7g105080	100.000	76	0	0	1	76	1	76	1.87e-49	155
MS.gene80714.t1	MTR_3g092130	100.000	76	0	0	1	76	1	76	1.87e-49	155
MS.gene80714.t1	MTR_1g059690	100.000	76	0	0	1	76	1	76	1.87e-49	155
MS.gene80714.t1	MTR_5g092700	98.701	77	1	0	1	77	1	77	2.44e-49	155
MS.gene80714.t1	MTR_5g092700	62.162	74	28	0	3	76	79	152	4.47e-26	97.1
MS.gene80714.t1	MTR_4g073580	98.701	77	1	0	1	77	1	77	2.44e-49	155
MS.gene80714.t1	MTR_4g073580	62.162	74	28	0	3	76	79	152	4.47e-26	97.1
MS.gene80714.t1	MTR_3g092130	100.000	76	0	0	1	76	1	76	2.69e-49	155
MS.gene80714.t1	MTR_4g073580	98.701	77	1	0	1	77	1	77	1.08e-48	155
MS.gene80714.t1	MTR_4g073580	44.231	104	28	1	3	76	79	182	1.55e-19	80.9
MS.gene80714.t1	MTR_4g088485	97.436	78	2	0	1	78	1	78	1.99e-48	155
MS.gene80714.t1	MTR_4g088485	100.000	76	0	0	1	76	138	213	2.42e-48	155
MS.gene80714.t1	MTR_4g088485	78.205	78	2	1	1	78	77	139	1.59e-33	117
MS.gene80714.t1	MTR_7g116360	97.436	78	2	0	1	78	1	78	2.19e-48	156
MS.gene80714.t1	MTR_7g116360	97.436	78	2	0	1	78	77	154	2.19e-48	156
MS.gene80714.t1	MTR_7g116360	100.000	76	0	0	1	76	153	228	2.58e-48	155
MS.gene80714.t1	MTR_1g066390	98.701	77	1	0	1	77	153	229	2.48e-48	156
MS.gene80714.t1	MTR_1g066390	97.436	78	2	0	1	78	1	78	2.62e-48	155
MS.gene80714.t1	MTR_1g066390	97.436	78	2	0	1	78	77	154	2.62e-48	155
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	6.89e-48	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	6.89e-48	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	6.89e-48	156
MS.gene80714.t1	MTR_4g080920	96.154	78	3	0	1	78	77	154	7.18e-48	154
MS.gene80714.t1	MTR_4g080920	96.154	78	3	0	1	78	1	78	1.05e-47	154
MS.gene80714.t1	MTR_4g080920	68.831	77	24	0	1	77	153	229	2.36e-29	107
MS.gene80714.t1	MTR_6g061930	97.436	78	2	0	1	78	1	78	1.37e-47	155
MS.gene80714.t1	MTR_6g061930	97.436	78	2	0	1	78	77	154	1.37e-47	155
MS.gene80714.t1	MTR_6g061930	100.000	76	0	0	1	76	214	289	1.67e-47	155
MS.gene80714.t1	MTR_6g061930	75.641	78	4	1	1	78	153	215	6.72e-31	112
MS.gene80714.t1	MTR_7g116360	97.436	78	2	0	1	78	49	126	1.51e-47	155
MS.gene80714.t1	MTR_7g116360	97.436	78	2	0	1	78	125	202	1.51e-47	155
MS.gene80714.t1	MTR_7g116360	100.000	76	0	0	1	76	201	276	1.77e-47	155
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	1.67e-47	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	1.67e-47	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	1.67e-47	156
MS.gene80714.t1	MTR_4g081010	100.000	76	0	0	1	76	229	304	1.97e-47	155
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	1.78e-47	155
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	1.78e-47	155
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	1.78e-47	155
MS.gene80714.t1	MTR_8g081020	97.436	78	2	0	1	78	1	78	6.75e-47	156
MS.gene80714.t1	MTR_8g081020	97.436	78	2	0	1	78	77	154	6.75e-47	156
MS.gene80714.t1	MTR_8g081020	97.436	78	2	0	1	78	153	230	6.75e-47	156
MS.gene80714.t1	MTR_8g081020	97.436	78	2	0	1	78	229	306	6.75e-47	156
MS.gene80714.t1	MTR_8g081020	100.000	76	0	0	1	76	305	380	7.93e-47	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	1	78	7.36e-47	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	77	154	7.36e-47	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	153	230	7.36e-47	156
MS.gene80714.t1	MTR_4g091580	100.000	76	0	0	1	76	305	380	8.73e-47	156
MS.gene80714.t1	MTR_4g091580	96.154	78	3	0	1	78	229	306	2.05e-46	155
MS.gene80714.t1	MTR_4g080797	97.436	78	2	0	1	78	1	78	8.73e-47	156
MS.gene80714.t1	MTR_4g080797	97.436	78	2	0	1	78	77	154	8.73e-47	156
MS.gene80714.t1	MTR_4g080797	97.436	78	2	0	1	78	153	230	8.73e-47	156
MS.gene80714.t1	MTR_4g080797	97.436	78	2	0	1	78	229	306	8.73e-47	156
MS.gene80714.t1	MTR_4g080797	100.000	76	0	0	1	76	305	380	1.02e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	8.73e-47	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	8.73e-47	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	8.73e-47	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	8.73e-47	156
MS.gene80714.t1	MTR_8g018230	100.000	76	0	0	1	76	305	380	1.02e-46	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	9.11e-47	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	9.11e-47	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	9.11e-47	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	229	306	9.11e-47	156
MS.gene80714.t1	MTR_4g081010	100.000	76	0	0	1	76	305	380	1.07e-46	155
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	100.000	76	0	0	1	76	381	456	4.08e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	3.45e-46	156
MS.gene80714.t1	MTR_8g018230	100.000	76	0	0	1	76	381	456	4.08e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	97.436	78	2	0	1	78	381	458	9.98e-46	156
MS.gene80714.t1	MTR_8g018230	100.000	76	0	0	1	76	457	532	1.18e-45	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	1	78	1.09e-45	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	77	154	1.09e-45	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	153	230	1.09e-45	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	229	306	1.09e-45	156
MS.gene80714.t1	MTR_4g091580	97.436	78	2	0	1	78	381	458	1.09e-45	156
MS.gene80714.t1	MTR_4g091580	100.000	76	0	0	1	76	457	532	1.28e-45	156
MS.gene80714.t1	MTR_4g091580	94.872	78	4	0	1	78	305	382	3.55e-44	152
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	229	306	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	305	382	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	97.436	78	2	0	1	78	381	458	1.09e-45	156
MS.gene80714.t1	MTR_4g081010	100.000	76	0	0	1	76	457	532	1.27e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	77	154	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	153	230	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	229	306	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	305	382	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	381	458	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	457	534	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	533	610	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	609	686	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	97.436	78	2	0	1	78	685	762	8.70e-45	156
MS.gene80714.t1	MTR_4g088495	100.000	76	0	0	1	76	761	836	1.01e-44	156
MS.gene80714.t1	MTR_4g088495	96.154	78	3	0	1	78	1	78	1.62e-43	153
MS.gene80714.t1	MTR_8g479250	94.872	78	4	0	1	78	141	218	2.59e-37	129
MS.gene80714.t1	MTR_8g479250	76.389	72	6	1	1	72	217	277	2.06e-26	101
MS.gene80714.t1	MTR_8g479250	100.000	41	0	0	1	41	1	41	2.84e-20	85.1
MS.gene80714.t1	MTR_8g479250	88.889	36	4	0	43	78	107	142	3.23e-14	68.6
MS.gene80714.t1	MTR_1g046640	71.053	76	22	0	1	76	240	315	5.90e-28	105
MS.gene80714.t1	MTR_5g076810	68.831	77	23	1	1	76	194	270	1.22e-27	103
MS.gene80714.t1	MTR_5g076660	69.863	73	22	0	1	73	266	338	7.78e-27	103
MS.gene80714.t1	MTR_5g067400	68.421	76	24	0	1	76	241	316	1.88e-25	99.0
MS.gene80714.t1	MTR_5g061310	60.000	75	30	0	1	75	2	76	1.23e-24	90.9
MS.gene80714.t1	MTR_5g076370	64.384	73	26	0	1	73	267	339	8.40e-23	92.4
MS.gene80714.t1	MTR_5g076505	61.333	75	29	0	1	75	240	314	9.22e-23	92.0
MS.gene80714.t1	MTR_2g038430	61.333	75	29	0	1	75	268	342	9.44e-23	92.4
MS.gene80714.t1	MTR_5g076720	65.333	75	26	0	1	75	315	389	4.20e-22	90.9
MS.gene80714.t1	MTR_1g046650	57.895	76	32	0	1	76	171	246	4.60e-22	89.0
MS.gene80714.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	7.52e-22	89.4
MS.gene80714.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	8.60e-22	89.4
MS.gene80714.t1	MTR_1g046650	57.895	76	32	0	1	76	271	346	1.33e-21	89.4
MS.gene80714.t1	MTR_5g076740	59.211	76	30	1	1	75	86	161	2.04e-21	85.1
MS.gene80714.t1	MTR_2g038420	60.000	75	30	0	1	75	260	334	3.13e-21	88.2
MS.gene80714.t1	MTR_7g094390	58.667	75	31	0	1	75	402	476	6.43e-20	85.5
MS.gene80714.t1	MTR_5g076520	57.333	75	31	1	1	74	244	318	1.10e-18	80.9
MS.gene80714.t1	MTR_7g024290	60.526	76	29	1	1	75	241	316	2.33e-18	80.1
MS.gene80714.t1	MTR_5g061290	53.333	75	35	0	1	75	252	326	1.46e-17	78.2
MS.gene80714.t1	MTR_4g009980	55.224	67	30	0	9	75	4	70	1.73e-17	72.4
MS.gene80714.t1	MTR_5g076350	48.684	76	38	1	1	75	8	83	3.46e-15	67.0
MS.gene80714.t1	MTR_5g076760	58.621	58	24	0	10	67	4	61	8.49e-15	65.9
MS.gene80714.t1	MTR_5g076780	58.333	60	25	0	15	74	4	63	9.30e-15	65.5
MS.gene80714.t1	MTR_5g076340	50.649	77	36	2	1	75	9	85	2.36e-14	64.7
MS.gene80714.t1	MTR_4g080783	41.176	85	46	1	44	124	7	91	2.56e-12	59.7
MS.gene80714.t1	MTR_4g070200	56.140	57	21	2	45	101	17	69	8.85e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80714.t1	AT2G47110	96.129	155	6	0	1	155	1	155	1.08e-108	306
MS.gene80714.t1	AT2G47110	96.129	155	6	0	1	155	1	155	1.08e-108	306
MS.gene80714.t1	AT3G62250	96.711	152	5	0	1	152	1	152	5.55e-108	304
MS.gene80714.t1	AT1G23410	92.208	154	12	0	1	154	1	154	5.73e-92	264
MS.gene80714.t1	AT3G52590	100.000	76	0	0	1	76	1	76	2.00e-49	155
MS.gene80714.t1	AT2G36170	100.000	76	0	0	1	76	1	76	2.00e-49	155
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	1	78	2.73e-49	155
MS.gene80714.t1	AT4G05050	100.000	76	0	0	1	76	77	152	3.25e-49	155
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	2.73e-49	155
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	77	152	3.25e-49	155
MS.gene80714.t1	AT2G35635	98.701	77	1	0	1	77	1	77	3.10e-49	155
MS.gene80714.t1	AT2G35635	62.162	74	28	0	3	76	79	152	1.72e-25	95.5
MS.gene80714.t1	AT1G31340	98.701	77	1	0	1	77	1	77	4.89e-49	155
MS.gene80714.t1	AT1G31340	63.514	74	27	0	3	76	79	152	1.45e-26	98.2
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	1	78	2.29e-48	156
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	77	154	2.29e-48	156
MS.gene80714.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.70e-48	155
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	1	78	2.29e-48	156
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	77	154	2.29e-48	156
MS.gene80714.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.70e-48	155
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	1	78	2.29e-48	156
MS.gene80714.t1	AT4G05050	97.436	78	2	0	1	78	77	154	2.29e-48	156
MS.gene80714.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.70e-48	155
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	1	78	2.29e-48	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	77	154	2.29e-48	156
MS.gene80714.t1	AT4G02890	100.000	76	0	0	1	76	153	228	2.70e-48	155
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	1	78	2.29e-48	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	77	154	2.29e-48	156
MS.gene80714.t1	AT4G02890	100.000	76	0	0	1	76	153	228	2.70e-48	155
MS.gene80714.t1	AT1G55060	96.154	78	3	0	1	78	77	154	7.39e-48	154
MS.gene80714.t1	AT1G55060	96.104	77	3	0	1	77	153	229	6.62e-46	149
MS.gene80714.t1	AT1G55060	84.615	78	12	0	1	78	1	78	1.33e-41	139
MS.gene80714.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.36e-48	157
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.30e-47	156
MS.gene80714.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.36e-48	157
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.30e-47	156
MS.gene80714.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.36e-48	157
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.30e-47	156
MS.gene80714.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.30e-47	156
MS.gene80714.t1	AT5G20620	98.701	77	1	0	1	77	229	305	8.36e-48	157
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	1	78	1.30e-47	156
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	77	154	1.30e-47	156
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	153	230	1.30e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	1.49e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	1.49e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	1.49e-47	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	229	304	1.75e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	1.49e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	1.49e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	1.49e-47	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	229	304	1.75e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.49e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.49e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	153	230	1.49e-47	156
MS.gene80714.t1	AT4G02890	100.000	76	0	0	1	76	229	304	1.75e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.49e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.49e-47	156
MS.gene80714.t1	AT4G02890	97.436	78	2	0	1	78	153	230	1.49e-47	156
MS.gene80714.t1	AT4G02890	100.000	76	0	0	1	76	229	304	1.75e-47	156
MS.gene80714.t1	AT1G65350	97.436	78	2	0	1	78	1	78	2.65e-47	156
MS.gene80714.t1	AT1G65350	96.154	78	3	0	1	78	152	229	3.65e-46	153
MS.gene80714.t1	AT1G65350	96.154	78	2	1	1	78	77	153	2.39e-44	148
MS.gene80714.t1	AT1G65350	79.121	91	5	1	1	77	228	318	1.17e-38	134
MS.gene80714.t1	AT5G20620	98.701	77	1	0	1	77	305	381	4.62e-47	157
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	1	78	7.15e-47	156
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	77	154	7.15e-47	156
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	153	230	7.15e-47	156
MS.gene80714.t1	AT5G20620	97.436	78	2	0	1	78	229	306	7.15e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	229	306	9.14e-47	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	305	380	1.07e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	229	306	9.14e-47	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	305	380	1.07e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	9.14e-47	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	229	306	9.14e-47	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	305	380	1.07e-46	156
MS.gene80714.t1	AT5G37640	94.872	78	4	0	1	78	79	156	2.37e-46	153
MS.gene80714.t1	AT5G37640	91.026	78	7	0	1	78	155	232	2.27e-42	143
MS.gene80714.t1	AT5G37640	92.208	77	5	1	1	76	231	307	3.52e-40	137
MS.gene80714.t1	AT5G37640	76.923	78	18	0	1	78	3	80	1.32e-33	120
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	229	306	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	305	382	3.61e-46	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	381	456	4.27e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	1	78	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	77	154	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	153	230	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	229	306	3.61e-46	156
MS.gene80714.t1	AT4G05320	97.436	78	2	0	1	78	305	382	3.61e-46	156
MS.gene80714.t1	AT4G05320	100.000	76	0	0	1	76	381	456	4.27e-46	156
MS.gene80714.t1	AT3G09790	91.026	78	7	0	1	78	79	156	1.56e-39	140
MS.gene80714.t1	AT3G09790	83.333	78	13	0	1	78	3	80	4.71e-36	131
MS.gene80714.t1	AT3G09790	79.730	74	15	0	1	74	552	625	1.29e-30	116
MS.gene80714.t1	AT3G09790	69.231	78	24	0	1	78	393	470	9.81e-28	107
MS.gene80714.t1	AT3G09790	73.684	76	18	1	1	74	319	394	9.21e-27	105
MS.gene80714.t1	AT3G09790	68.675	83	21	1	1	78	238	320	4.49e-26	103
MS.gene80714.t1	AT3G09790	67.073	82	20	2	1	75	155	236	1.15e-25	102
MS.gene80714.t1	AT3G09790	64.706	85	23	1	1	78	469	553	1.22e-24	99.4
MS.gene80714.t1	AT3G09790	91.026	78	7	0	1	78	79	156	1.56e-39	140
MS.gene80714.t1	AT3G09790	83.333	78	13	0	1	78	3	80	4.71e-36	131
MS.gene80714.t1	AT3G09790	79.730	74	15	0	1	74	552	625	1.29e-30	116
MS.gene80714.t1	AT3G09790	69.231	78	24	0	1	78	393	470	9.81e-28	107
MS.gene80714.t1	AT3G09790	73.684	76	18	1	1	74	319	394	9.21e-27	105
MS.gene80714.t1	AT3G09790	68.675	83	21	1	1	78	238	320	4.49e-26	103
MS.gene80714.t1	AT3G09790	67.073	82	20	2	1	75	155	236	1.15e-25	102
MS.gene80714.t1	AT3G09790	64.706	85	23	1	1	78	469	553	1.22e-24	99.4
MS.gene80714.t1	AT1G53930	75.342	73	18	0	1	73	86	158	1.20e-32	114
MS.gene80714.t1	AT1G53950	61.972	71	27	0	1	71	69	139	1.22e-24	92.8
MS.gene80714.t1	AT1G11980	55.263	76	34	0	1	76	1	76	6.34e-24	89.4
MS.gene80714.t1	AT1G53945	44.286	70	39	0	1	70	46	115	2.44e-12	60.5
MS.gene80714.t1	AT5G42220	38.889	72	44	0	1	72	24	95	3.85e-12	63.5
MS.gene80714.t1	AT5G42220	38.889	72	44	0	1	72	24	95	3.85e-12	63.5
MS.gene80714.t1	AT4G12570	38.667	75	45	1	1	74	95	169	7.05e-12	62.8

Find 40 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCTTATGCTTAATCTTCT+TGG	0.173455	5.4:-23971699	None:intergenic
TCCTTCCTTATCCTGGATCT+TGG	0.283815	5.4:-23971519	None:intergenic
GATGAAGAGTTGATTCCTTC+TGG	0.302002	5.4:-23971619	None:intergenic
TGCTTATGCTTAATCTTCTT+GGG	0.315578	5.4:-23971698	None:intergenic
ATCTTCGTGAAAACCCTAAC+AGG	0.342406	5.4:+23971443	MS.gene80714:CDS
CCAAATGCTGAGTGTGGTGC+TGG	0.364327	5.4:+23971800	MS.gene80714:CDS
CCAGCACCACACTCAGCATT+TGG	0.383171	5.4:-23971800	None:intergenic
GTGTGGTGCTGGGACTTTCA+TGG	0.411373	5.4:+23971811	MS.gene80714:CDS
TTTATAAGGTTGATGATTCT+GGG	0.414191	5.4:+23971750	MS.gene80714:CDS
GTGGAATTCCTTCCTTATCC+TGG	0.420862	5.4:-23971526	None:intergenic
AAGATAAGACGTTGTTGGTC+CGG	0.466286	5.4:-23971548	None:intergenic
CGGCGAAGATAAGACGTTGT+TGG	0.471359	5.4:-23971553	None:intergenic
CTTGGCTTTCACATTGTCGA+TGG	0.487814	5.4:-23971501	None:intergenic
GAAAGCCAAGATCCAGGATA+AGG	0.514154	5.4:+23971514	MS.gene80714:CDS
CTGGGAAGGTGCAGAGGCTG+AGG	0.516022	5.4:+23971768	MS.gene80714:CDS
CAAATGCTGAGTGTGGTGCT+GGG	0.525046	5.4:+23971801	MS.gene80714:CDS
CAATGTGAAAGCCAAGATCC+AGG	0.546832	5.4:+23971508	MS.gene80714:CDS
TCCGTGGTGGTGCGAAGAAG+AGG	0.548584	5.4:+23971654	MS.gene80714:CDS
GTCTGAAGATTCAACTTCGA+GGG	0.549043	5.4:-23971477	None:intergenic
GCCGGAAAACAGCTCGAAGA+CGG	0.555312	5.4:+23971572	MS.gene80714:CDS
TAAGGTTGATGATTCTGGGA+AGG	0.571726	5.4:+23971754	MS.gene80714:CDS
TGTCTGAAGATTCAACTTCG+AGG	0.572197	5.4:-23971478	None:intergenic
CGTCATTATTGTGGGAAATG+TGG	0.573413	5.4:+23971848	MS.gene80714:CDS
CAACAACGTCTTATCTTCGC+CGG	0.574971	5.4:+23971554	MS.gene80714:CDS
TCTTCGCACCACCACGGAGA+CGG	0.577038	5.4:-23971649	None:intergenic
AGAAGATTAAGCATAAGCAT+AGG	0.593970	5.4:+23971702	MS.gene80714:CDS
TCCTCTTCTTCGCACCACCA+CGG	0.597995	5.4:-23971655	None:intergenic
ATCAGCTTTCTGATAAACAT+AGG	0.600943	5.4:-23971876	None:intergenic
GATTAAGCATAAGCATAGGA+AGG	0.601776	5.4:+23971706	MS.gene80714:CDS
GAAGGTGCAGAGGCTGAGGA+AGG	0.602387	5.4:+23971772	MS.gene80714:CDS
ATAAGACGTTGTTGGTCCGG+TGG	0.605376	5.4:-23971545	None:intergenic
GCCAAGATCCAGGATAAGGA+AGG	0.608413	5.4:+23971518	MS.gene80714:CDS
CTTGTTCTCCGTCTCCGTGG+TGG	0.613826	5.4:+23971641	MS.gene80714:CDS
TGTTGTAGTCAGCGAGAGTG+CGG	0.623718	5.4:-23971595	None:intergenic
ATGATTCTGGGAAGGTGCAG+AGG	0.626218	5.4:+23971762	MS.gene80714:CDS
GGATAAGGAAGGAATTCCAC+CGG	0.633438	5.4:+23971529	MS.gene80714:CDS
CATCTTGTTCTCCGTCTCCG+TGG	0.636054	5.4:+23971638	MS.gene80714:CDS
CGCTGACTACAACATCCAGA+AGG	0.659223	5.4:+23971604	MS.gene80714:CDS
TCTTCGTGAAAACCCTAACA+GGG	0.705571	5.4:+23971444	MS.gene80714:CDS
GAGTGTCCAAATGCTGAGTG+TGG	0.711612	5.4:+23971794	MS.gene80714:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTGATCGTCATTATTGT+GGG	+	chr5.4:23971840-23971859	MS.gene80714:CDS	25.0%
!!!	TTTATAAGGTTGATGATTCT+GGG	+	chr5.4:23971750-23971769	MS.gene80714:CDS	25.0%
!!!	TTTTATAAGGTTGATGATTC+TGG	+	chr5.4:23971749-23971768	MS.gene80714:CDS	25.0%
	AGAAGATTAAGCATAAGCAT+AGG	+	chr5.4:23971702-23971721	MS.gene80714:CDS	30.0%
	ATCAGCTTTCTGATAAACAT+AGG	-	chr5.4:23971879-23971898	None:intergenic	30.0%
	ATGCTTATGCTTAATCTTCT+TGG	-	chr5.4:23971702-23971721	None:intergenic	30.0%
	TGCTTATGCTTAATCTTCTT+GGG	-	chr5.4:23971701-23971720	None:intergenic	30.0%
!!	CATTTTGATCGTCATTATTG+TGG	+	chr5.4:23971839-23971858	MS.gene80714:CDS	30.0%
	GATTAAGCATAAGCATAGGA+AGG	+	chr5.4:23971706-23971725	MS.gene80714:CDS	35.0%
!	GGTTATTGTTTTCCCTGTTA+GGG	-	chr5.4:23971459-23971478	None:intergenic	35.0%
!!	AATCTTCTTGGGTTTTGTGT+AGG	-	chr5.4:23971690-23971709	None:intergenic	35.0%
!!	TGCTGTGTTGCAGTTTTATA+AGG	+	chr5.4:23971736-23971755	MS.gene80714:CDS	35.0%
	AAGATAAGACGTTGTTGGTC+CGG	-	chr5.4:23971551-23971570	None:intergenic	40.0%
	ATCTTCGTGAAAACCCTAAC+AGG	+	chr5.4:23971443-23971462	MS.gene80714:CDS	40.0%
	CGTCATTATTGTGGGAAATG+TGG	+	chr5.4:23971848-23971867	MS.gene80714:CDS	40.0%
	GTCTGAAGATTCAACTTCGA+GGG	-	chr5.4:23971480-23971499	None:intergenic	40.0%
	TCTTCGTGAAAACCCTAACA+GGG	+	chr5.4:23971444-23971463	MS.gene80714:CDS	40.0%
	TGTCTGAAGATTCAACTTCG+AGG	-	chr5.4:23971481-23971500	None:intergenic	40.0%
!	GATGAAGAGTTGATTCCTTC+TGG	-	chr5.4:23971622-23971641	None:intergenic	40.0%
!	GGGTTATTGTTTTCCCTGTT+AGG	-	chr5.4:23971460-23971479	None:intergenic	40.0%
!!	TAAGGTTGATGATTCTGGGA+AGG	+	chr5.4:23971754-23971773	MS.gene80714:CDS	40.0%
	CAACAACGTCTTATCTTCGC+CGG	+	chr5.4:23971554-23971573	MS.gene80714:CDS	45.0%
	CAATGTGAAAGCCAAGATCC+AGG	+	chr5.4:23971508-23971527	MS.gene80714:CDS	45.0%
	GAAAGCCAAGATCCAGGATA+AGG	+	chr5.4:23971514-23971533	MS.gene80714:CDS	45.0%
	GGATAAGGAAGGAATTCCAC+CGG	+	chr5.4:23971529-23971548	MS.gene80714:CDS	45.0%
	GTGGAATTCCTTCCTTATCC+TGG	-	chr5.4:23971529-23971548	None:intergenic	45.0%
	TCCTTCCTTATCCTGGATCT+TGG	-	chr5.4:23971522-23971541	None:intergenic	45.0%
!	CTTGGCTTTCACATTGTCGA+TGG	-	chr5.4:23971504-23971523	None:intergenic	45.0%
	ATAAGACGTTGTTGGTCCGG+TGG	-	chr5.4:23971548-23971567	None:intergenic	50.0%
	CAAATGCTGAGTGTGGTGCT+GGG	+	chr5.4:23971801-23971820	MS.gene80714:CDS	50.0%
	CGGCGAAGATAAGACGTTGT+TGG	-	chr5.4:23971556-23971575	None:intergenic	50.0%
	GAGTGTCCAAATGCTGAGTG+TGG	+	chr5.4:23971794-23971813	MS.gene80714:CDS	50.0%
	GCCAAGATCCAGGATAAGGA+AGG	+	chr5.4:23971518-23971537	MS.gene80714:CDS	50.0%
	TGTTGTAGTCAGCGAGAGTG+CGG	-	chr5.4:23971598-23971617	None:intergenic	50.0%
!	ATGATTCTGGGAAGGTGCAG+AGG	+	chr5.4:23971762-23971781	MS.gene80714:CDS	50.0%
!	CGCTGACTACAACATCCAGA+AGG	+	chr5.4:23971604-23971623	MS.gene80714:CDS	50.0%
	CATCTTGTTCTCCGTCTCCG+TGG	+	chr5.4:23971638-23971657	MS.gene80714:CDS	55.0%
	CCAAATGCTGAGTGTGGTGC+TGG	+	chr5.4:23971800-23971819	MS.gene80714:CDS	55.0%
	CCAGCACCACACTCAGCATT+TGG	-	chr5.4:23971803-23971822	None:intergenic	55.0%
	GCCGGAAAACAGCTCGAAGA+CGG	+	chr5.4:23971572-23971591	MS.gene80714:CDS	55.0%
	TCCTCTTCTTCGCACCACCA+CGG	-	chr5.4:23971658-23971677	None:intergenic	55.0%
!	GTGTGGTGCTGGGACTTTCA+TGG	+	chr5.4:23971811-23971830	MS.gene80714:CDS	55.0%
!!	GCCGTCTTCGAGCTGTTTTC+CGG	-	chr5.4:23971576-23971595	None:intergenic	55.0%
	CTTGTTCTCCGTCTCCGTGG+TGG	+	chr5.4:23971641-23971660	MS.gene80714:CDS	60.0%
	TCTTCGCACCACCACGGAGA+CGG	-	chr5.4:23971652-23971671	None:intergenic	60.0%
!	GAAGGTGCAGAGGCTGAGGA+AGG	+	chr5.4:23971772-23971791	MS.gene80714:CDS	60.0%
!	TCCGTGGTGGTGCGAAGAAG+AGG	+	chr5.4:23971654-23971673	MS.gene80714:CDS	60.0%
!	CTGGGAAGGTGCAGAGGCTG+AGG	+	chr5.4:23971768-23971787	MS.gene80714:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	23971437	23971904	23971437	ID=MS.gene80714
chr5.4	mRNA	23971437	23971904	23971437	ID=MS.gene80714.t1;Parent=MS.gene80714
chr5.4	exon	23971437	23971904	23971437	ID=MS.gene80714.t1.exon1;Parent=MS.gene80714.t1
chr5.4	CDS	23971437	23971904	23971437	ID=cds.MS.gene80714.t1;Parent=MS.gene80714.t1

Gene Sequence

>MS.gene80714

ATGCAGATCTTCGTGAAAACCCTAACAGGGAAAACAATAACCCTCGAAGTTGAATCTTCAGACACCATCGACAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCACCGGACCAACAACGTCTTATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACTCTCGCTGACTACAACATCCAGAAGGAATCAACTCTTCATCTTGTTCTCCGTCTCCGTGGTGGTGCGAAGAAGAGGAAGAAGAAGACCTACACAAAACCCAAGAAGATTAAGCATAAGCATAGGAAGGTGAAGCTTGCTGTGTTGCAGTTTTATAAGGTTGATGATTCTGGGAAGGTGCAGAGGCTGAGGAAGGAGTGTCCAAATGCTGAGTGTGGTGCTGGGACTTTCATGGCGAATCATTTTGATCGTCATTATTGTGGGAAATGTGGTTTGACCTATGTTTATCAGAAAGCTGATGCTTGA

Protein sequence

>MS.gene80714.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKADA