AlfalfaGEDB | MS.gene96922

M. sativa cultivar XinJiangDaYe / MS.gene96922

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96922.t1	XP_013467196.1	85.7	140	20	0	1	140	1	140	8.20E-45	189.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96922.t1	Q9LE22	47.8	138	66	1	3	140	22	153	1.1e-26	120.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96922.t1	A0A072VHE0	85.7	140	20	0	1	140	1	140	5.9e-45	189.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene47134	MS.gene96922	PPI
MS.gene96922	MS.gene64314	PPI
MS.gene022455	MS.gene96922	PPI
MS.gene87673	MS.gene96922	PPI
MS.gene05284	MS.gene96922	PPI
MS.gene041795	MS.gene96922	PPI
MS.gene046988	MS.gene96922	PPI
MS.gene63000	MS.gene96922	PPI
MS.gene96922	MS.gene057293	PPI
MS.gene96922	MS.gene53650	PPI
MS.gene22553	MS.gene96922	PPI
MS.gene96914	MS.gene96922	PPI
MS.gene53648	MS.gene96922	PPI
MS.gene017446	MS.gene96922	PPI
MS.gene44354	MS.gene96922	PPI
MS.gene96922	MS.gene79028	PPI
MS.gene038456	MS.gene96922	PPI
MS.gene96922	MS.gene026940	PPI
MS.gene060446	MS.gene96922	PPI
MS.gene96922	MS.gene98295	PPI
MS.gene004899	MS.gene96922	PPI
MS.gene036602	MS.gene96922	PPI
MS.gene008831	MS.gene96922	PPI
MS.gene96913	MS.gene96922	PPI
MS.gene009021	MS.gene96922	PPI
MS.gene96922	MS.gene025797	PPI
MS.gene96922	MS.gene21931	PPI
MS.gene46237	MS.gene96922	PPI
MS.gene96922	MS.gene53659	PPI
MS.gene96922	MS.gene09960	PPI
MS.gene96922	MS.gene061768	PPI
MS.gene04915	MS.gene96922	PPI
MS.gene074100	MS.gene96922	PPI
MS.gene96922	MS.gene80714	PPI
MS.gene001381	MS.gene96922	PPI
MS.gene63281	MS.gene96922	PPI
MS.gene68345	MS.gene96922	PPI
MS.gene065998	MS.gene96922	PPI
MS.gene96922	MS.gene057167	PPI
MS.gene036930	MS.gene96922	PPI
MS.gene96922	MS.gene93763	PPI
MS.gene001246	MS.gene96922	PPI
MS.gene040127	MS.gene96922	PPI
MS.gene62258	MS.gene96922	PPI
MS.gene55545	MS.gene96922	PPI
MS.gene000724	MS.gene96922	PPI
MS.gene74452	MS.gene96922	PPI
MS.gene64311	MS.gene96922	PPI
MS.gene96922	MS.gene29794	PPI
MS.gene27879	MS.gene96922	PPI
MS.gene040331	MS.gene96922	PPI
MS.gene96922	MS.gene71511	PPI
MS.gene58906	MS.gene96922	PPI
MS.gene96922	MS.gene033361	PPI
MS.gene96922	MS.gene056461	PPI
MS.gene58860	MS.gene96922	PPI
MS.gene64313	MS.gene96922	PPI
MS.gene96922	MS.gene89216	PPI
MS.gene96922	MS.gene35562	PPI
MS.gene27516	MS.gene96922	PPI
MS.gene02545	MS.gene96922	PPI
MS.gene053319	MS.gene96922	PPI
MS.gene49270	MS.gene96922	PPI
MS.gene97948	MS.gene96922	PPI
MS.gene61009	MS.gene96922	PPI
MS.gene64327	MS.gene96922	PPI
MS.gene000738	MS.gene96922	PPI
MS.gene64307	MS.gene96922	PPI
MS.gene061261	MS.gene96922	PPI
MS.gene026618	MS.gene96922	PPI
MS.gene04917	MS.gene96922	PPI
MS.gene96922	MS.gene07422	PPI
MS.gene96922	MS.gene023648	PPI
MS.gene47195	MS.gene96922	PPI
MS.gene96922	MS.gene64316	PPI
MS.gene96922	MS.gene29793	PPI
MS.gene96922	MS.gene98294	PPI
MS.gene013748	MS.gene96922	PPI
MS.gene28338	MS.gene96922	PPI
MS.gene65954	MS.gene96922	PPI
MS.gene008225	MS.gene96922	PPI
MS.gene96922	MS.gene64317	PPI
MS.gene056383	MS.gene96922	PPI
MS.gene64324	MS.gene96922	PPI
MS.gene011400	MS.gene96922	PPI
MS.gene015470	MS.gene96922	PPI
MS.gene96922	MS.gene93087	PPI
MS.gene024717	MS.gene96922	PPI
MS.gene96922	MS.gene64310	PPI
MS.gene64308	MS.gene96922	PPI
MS.gene96922	MS.gene29459	PPI
MS.gene53662	MS.gene96922	PPI
MS.gene96922	MS.gene71207	PPI
MS.gene93087	MS.gene96922	PPI
MS.gene35563	MS.gene96922	PPI
MS.gene55496	MS.gene96922	PPI
MS.gene003880	MS.gene96922	PPI
MS.gene54637	MS.gene96922	PPI
MS.gene49271	MS.gene96922	PPI
MS.gene67281	MS.gene96922	PPI
MS.gene62540	MS.gene96922	PPI
MS.gene025777	MS.gene96922	PPI
MS.gene022456	MS.gene96922	PPI
MS.gene062239	MS.gene96922	PPI
MS.gene46886	MS.gene96922	PPI
MS.gene96922	MS.gene21696	PPI
MS.gene21155	MS.gene96922	PPI
MS.gene92775	MS.gene96922	PPI
MS.gene96922	MS.gene53465	PPI
MS.gene96922	MS.gene074045	PPI
MS.gene07422	MS.gene96922	PPI
MS.gene03228	MS.gene96922	PPI
MS.gene09934	MS.gene96922	PPI
MS.gene96922	MS.gene85596	PPI
MS.gene21932	MS.gene96922	PPI
MS.gene94551	MS.gene96922	PPI
MS.gene027655	MS.gene96922	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96922.t1	MTR_1g046950	82.394	142	25	0	1	142	1	142	4.44e-80	233
MS.gene96922.t1	MTR_1g047100	82.979	141	23	1	1	141	1	140	6.88e-79	229
MS.gene96922.t1	MTR_5g079340	72.222	144	33	2	1	142	1	139	8.10e-68	201
MS.gene96922.t1	MTR_5g008705	73.846	130	32	1	12	141	2	129	1.11e-61	186
MS.gene96922.t1	MTR_3g067610	62.143	140	47	1	3	142	4	137	6.30e-61	184
MS.gene96922.t1	MTR_5g008695	73.043	115	31	0	28	142	1	115	4.64e-56	171
MS.gene96922.t1	MTR_8g107110	57.246	138	56	1	3	140	23	157	5.68e-51	160
MS.gene96922.t1	MTR_6g079570	54.286	140	60	2	3	141	25	161	9.15e-48	152
MS.gene96922.t1	MTR_1g032070	47.101	138	71	1	3	140	45	180	6.31e-39	130
MS.gene96922.t1	MTR_4g067270	44.286	140	74	2	3	140	4	141	2.98e-35	119
MS.gene96922.t1	MTR_8g105230	43.284	134	74	1	4	137	36	167	8.74e-35	119
MS.gene96922.t1	MTR_8g036075	47.552	143	69	3	4	140	49	191	7.20e-34	117
MS.gene96922.t1	MTR_7g089760	46.043	139	71	2	4	140	5	141	3.15e-33	114
MS.gene96922.t1	MTR_6g023460	43.478	138	67	2	7	140	11	141	6.89e-33	113
MS.gene96922.t1	MTR_7g075040	44.218	147	75	3	1	140	44	190	3.77e-32	113
MS.gene96922.t1	MTR_1g041285	41.606	137	78	1	4	140	12	146	2.26e-30	107
MS.gene96922.t1	MTR_6g025320	39.416	137	81	1	4	140	12	146	2.75e-29	104
MS.gene96922.t1	MTR_6g025320	43.750	64	36	0	79	142	12	75	3.17e-12	60.5
MS.gene96922.t1	MTR_5g088320	40.288	139	77	2	4	140	12	146	2.97e-29	104
MS.gene96922.t1	MTR_5g088320	43.750	64	36	0	79	142	12	75	3.20e-12	60.5
MS.gene96922.t1	MTR_7g087610	38.686	137	82	1	4	140	12	146	3.00e-29	104
MS.gene96922.t1	MTR_7g087610	43.750	64	36	0	79	142	12	75	3.91e-12	60.1
MS.gene96922.t1	MTR_1g076650	41.481	135	77	1	6	140	14	146	5.37e-29	103
MS.gene96922.t1	MTR_4g086260	40.000	140	80	1	3	142	56	191	1.90e-28	103
MS.gene96922.t1	MTR_5g017510	40.845	142	78	3	3	142	47	184	1.25e-27	101
MS.gene96922.t1	MTR_5g017560	40.845	142	78	3	3	142	47	184	1.25e-27	101
MS.gene96922.t1	MTR_7g090450	38.571	140	83	3	4	140	73	212	1.35e-27	102
MS.gene96922.t1	MTR_2g098890	40.714	140	81	1	3	140	63	202	5.01e-27	100
MS.gene96922.t1	MTR_5g017550	38.571	140	83	1	3	142	47	183	1.10e-26	99.0
MS.gene96922.t1	MTR_5g017550	42.424	66	38	0	2	67	118	183	7.45e-11	57.8
MS.gene96922.t1	MTR_4g103650	37.143	140	79	2	4	140	2	135	1.32e-25	94.7
MS.gene96922.t1	MTR_3g089070	37.226	137	77	2	7	140	9	139	1.62e-25	94.7
MS.gene96922.t1	MTR_3g089090	37.226	137	77	2	7	140	8	138	1.96e-25	94.4
MS.gene96922.t1	MTR_8g066630	33.813	139	91	1	4	141	17	155	3.24e-25	94.4
MS.gene96922.t1	MTR_4g115170	39.103	156	79	3	3	142	63	218	6.26e-25	95.5
MS.gene96922.t1	MTR_4g103630	37.143	140	79	2	4	140	6	139	8.06e-25	92.8
MS.gene96922.t1	MTR_4g103655	36.496	137	84	1	4	140	6	139	1.78e-24	92.0
MS.gene96922.t1	MTR_1g071150	37.226	137	83	1	4	140	12	145	4.62e-24	91.3
MS.gene96922.t1	MTR_1g071150	42.188	64	37	0	1	64	81	144	6.73e-11	57.0
MS.gene96922.t1	MTR_4g112460	31.429	140	96	0	3	142	10	149	7.76e-24	91.3
MS.gene96922.t1	MTR_3g083470	35.664	143	74	3	1	140	90	217	2.14e-23	91.7
MS.gene96922.t1	MTR_7g074240	38.356	146	80	3	5	140	25	170	6.32e-23	89.0
MS.gene96922.t1	MTR_0168s0120	38.393	112	67	1	29	140	1	110	4.29e-22	85.1
MS.gene96922.t1	MTR_6g025320	38.393	112	67	1	29	140	1	110	4.29e-22	85.1
MS.gene96922.t1	MTR_8g069915	30.769	143	96	1	2	141	7	149	3.42e-20	81.6
MS.gene96922.t1	MTR_8g078270	31.884	138	90	2	5	141	54	188	4.62e-20	82.0
MS.gene96922.t1	MTR_7g115040	36.842	133	80	2	9	140	17	146	9.83e-20	80.1
MS.gene96922.t1	MTR_5g009830	36.429	140	77	4	5	140	372	503	1.33e-19	84.0
MS.gene96922.t1	MTR_3g051770	36.000	150	80	4	2	140	383	527	1.93e-19	83.6
MS.gene96922.t1	MTR_5g092810	36.170	141	76	4	5	140	398	529	2.40e-19	83.6
MS.gene96922.t1	MTR_1g046960	66.667	60	19	1	28	87	1	59	2.41e-19	77.8
MS.gene96922.t1	MTR_5g089320	35.971	139	81	3	5	141	374	506	4.45e-19	82.8
MS.gene96922.t1	MTR_4g132070	35.000	140	79	4	5	140	397	528	4.77e-19	82.4
MS.gene96922.t1	MTR_8g099095	35.714	140	78	4	5	140	372	503	5.80e-19	82.4
MS.gene96922.t1	MTR_6g007613	35.036	137	87	1	4	140	29	163	9.44e-19	78.2
MS.gene96922.t1	MTR_1g030440	32.877	146	84	2	3	140	21	160	2.14e-18	77.0
MS.gene96922.t1	MTR_7g074020	33.577	137	89	1	4	140	30	164	4.48e-18	76.3
MS.gene96922.t1	MTR_0028s0170	34.783	138	82	3	5	140	384	515	1.69e-17	78.2
MS.gene96922.t1	MTR_5g027000	31.008	129	87	1	9	137	27	153	7.72e-17	72.8
MS.gene96922.t1	MTR_1g026190	34.286	140	80	4	5	140	388	519	1.12e-16	75.9
MS.gene96922.t1	MTR_3g088655	30.000	150	89	4	4	140	8	154	3.54e-16	70.9
MS.gene96922.t1	MTR_5g079470	59.322	59	23	1	8	66	14	71	9.32e-16	67.8
MS.gene96922.t1	MTR_6g007613	33.065	124	81	1	4	127	29	150	6.89e-15	67.8
MS.gene96922.t1	MTR_4g132040	33.333	141	80	4	5	140	401	532	1.94e-14	69.3
MS.gene96922.t1	MTR_5g011850	30.070	143	93	3	2	141	7	145	2.50e-14	65.9
MS.gene96922.t1	MTR_7g074020	32.231	121	80	1	4	124	30	148	2.73e-14	66.2
MS.gene96922.t1	MTR_4g107490	32.847	137	87	3	5	140	379	511	3.34e-14	68.6
MS.gene96922.t1	MTR_7g068710	31.159	138	92	1	3	140	360	494	4.98e-14	68.2
MS.gene96922.t1	MTR_3g055570	30.435	138	79	1	4	141	52	172	6.75e-14	65.5
MS.gene96922.t1	MTR_7g091890	33.333	132	85	1	9	140	368	496	7.26e-14	67.8
MS.gene96922.t1	MTR_8g096050	29.496	139	90	1	2	140	53	183	4.77e-13	65.5
MS.gene96922.t1	MTR_3g098460	28.676	136	89	1	5	140	34	161	2.20e-12	63.5
MS.gene96922.t1	MTR_5g022030	29.787	141	89	5	4	140	406	540	2.54e-12	63.2
MS.gene96922.t1	MTR_3g098090	30.000	140	85	4	5	140	338	468	2.81e-12	63.2
MS.gene96922.t1	MTR_3g098070	30.000	140	85	4	5	140	335	465	4.51e-12	62.4
MS.gene96922.t1	MTR_1g096490	32.374	139	83	4	5	140	336	466	6.91e-12	62.0
MS.gene96922.t1	MTR_1g054865	31.655	139	84	4	5	140	467	597	9.19e-12	61.6
MS.gene96922.t1	MTR_7g084400	29.496	139	90	1	2	140	33	163	3.26e-11	60.1
MS.gene96922.t1	MTR_4g066660	28.571	140	92	3	3	140	376	509	5.70e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96922.t1	AT1G18210	54.676	139	57	1	3	141	22	154	2.31e-49	156
MS.gene96922.t1	AT1G18210	54.676	139	57	1	3	141	22	154	2.31e-49	156
MS.gene96922.t1	AT1G73630	52.143	140	61	1	2	141	18	151	2.09e-46	148
MS.gene96922.t1	AT1G66400	50.000	138	69	0	3	140	14	151	1.67e-45	145
MS.gene96922.t1	AT5G37770	49.296	142	70	1	3	142	16	157	4.09e-44	142
MS.gene96922.t1	AT5G37770	49.296	142	70	1	3	142	16	157	4.09e-44	142
MS.gene96922.t1	AT1G24620	44.928	138	74	1	4	141	37	172	4.63e-36	122
MS.gene96922.t1	AT5G17470	45.000	140	71	2	5	141	3	139	5.97e-35	119
MS.gene96922.t1	AT2G15680	43.571	140	75	1	3	142	49	184	8.91e-35	119
MS.gene96922.t1	AT3G07490	48.201	139	68	2	4	140	5	141	1.13e-34	118
MS.gene96922.t1	AT1G05990	44.604	139	74	2	4	140	5	142	6.87e-34	116
MS.gene96922.t1	AT2G36180	48.148	135	67	2	8	140	4	137	7.39e-33	113
MS.gene96922.t1	AT3G03400	39.535	129	78	0	5	133	6	134	5.89e-32	110
MS.gene96922.t1	AT4G03290	41.429	140	79	2	4	140	5	144	1.99e-31	110
MS.gene96922.t1	AT3G10190	43.165	139	74	3	4	140	70	205	5.63e-31	110
MS.gene96922.t1	AT2G43290	41.549	142	78	2	4	140	65	206	1.26e-30	109
MS.gene96922.t1	AT5G37780	40.288	139	77	2	4	140	12	146	1.06e-29	105
MS.gene96922.t1	AT5G37780	44.444	63	35	0	79	141	12	74	3.89e-12	60.5
MS.gene96922.t1	AT1G66410	40.288	139	77	2	4	140	12	146	1.06e-29	105
MS.gene96922.t1	AT1G66410	44.444	63	35	0	79	141	12	74	3.89e-12	60.5
MS.gene96922.t1	AT5G21274	40.146	137	80	1	4	140	12	146	1.35e-29	105
MS.gene96922.t1	AT5G21274	43.750	64	36	0	79	142	12	75	3.32e-12	60.5
MS.gene96922.t1	AT3G43810	39.416	137	81	1	4	140	12	146	2.88e-29	104
MS.gene96922.t1	AT3G43810	43.750	64	36	0	79	142	12	75	3.32e-12	60.5
MS.gene96922.t1	AT3G56800	39.416	137	81	1	4	140	12	146	3.08e-29	104
MS.gene96922.t1	AT3G56800	43.750	64	36	0	79	142	12	75	3.35e-12	60.5
MS.gene96922.t1	AT2G27030	39.416	137	81	1	4	140	12	146	3.08e-29	104
MS.gene96922.t1	AT2G27030	43.750	64	36	0	79	142	12	75	3.35e-12	60.5
MS.gene96922.t1	AT2G41110	39.416	137	81	1	4	140	12	146	3.08e-29	104
MS.gene96922.t1	AT2G41110	43.750	64	36	0	79	142	12	75	3.35e-12	60.5
MS.gene96922.t1	AT4G12860	43.165	139	75	2	4	140	5	141	3.34e-29	104
MS.gene96922.t1	AT3G59440	40.288	139	78	2	4	140	51	186	6.67e-29	104
MS.gene96922.t1	AT2G27030	40.288	139	77	2	4	140	12	146	8.57e-29	104
MS.gene96922.t1	AT2G27030	43.750	64	36	0	79	142	12	75	6.88e-12	60.5
MS.gene96922.t1	AT3G43810	40.288	139	77	2	4	140	12	146	2.17e-28	103
MS.gene96922.t1	AT3G43810	44.444	63	35	0	79	141	12	74	1.72e-11	59.7
MS.gene96922.t1	AT3G22930	39.416	137	81	1	4	140	35	169	9.44e-28	101
MS.gene96922.t1	AT4G14640	39.416	137	81	1	4	140	13	147	2.74e-27	99.4
MS.gene96922.t1	AT2G41110	37.086	151	77	3	4	140	12	158	8.78e-26	95.9
MS.gene96922.t1	AT5G37780	36.364	154	77	3	4	140	12	161	1.79e-25	95.1
MS.gene96922.t1	AT2G41410	37.324	142	82	4	4	141	70	208	8.75e-25	94.7
MS.gene96922.t1	AT1G32250	32.394	142	92	1	3	140	15	156	9.94e-25	93.2
MS.gene96922.t1	AT5G37780	39.200	125	70	2	18	140	13	133	3.73e-24	90.9
MS.gene96922.t1	AT2G41100	37.500	152	81	2	4	141	12	163	3.96e-24	95.1
MS.gene96922.t1	AT2G41100	36.601	153	82	2	4	141	101	253	5.04e-22	89.7
MS.gene96922.t1	AT2G41100	37.500	152	81	2	4	141	12	163	3.96e-24	95.1
MS.gene96922.t1	AT2G41100	36.601	153	82	2	4	141	101	253	5.04e-22	89.7
MS.gene96922.t1	AT5G42380	35.507	138	88	1	3	140	48	184	4.39e-24	92.0
MS.gene96922.t1	AT1G66410	39.200	125	70	2	18	140	36	156	5.51e-24	91.3
MS.gene96922.t1	AT5G37780	39.200	125	70	2	18	140	52	172	6.88e-24	91.3
MS.gene96922.t1	AT4G37010	37.226	137	84	1	4	140	27	161	4.88e-23	89.0
MS.gene96922.t1	AT4G37010	37.226	137	84	1	4	140	31	165	5.55e-23	89.0
MS.gene96922.t1	AT1G18530	31.250	144	96	1	1	141	1	144	8.75e-23	88.2
MS.gene96922.t1	AT1G66410	39.474	114	63	2	29	140	1	110	1.43e-22	86.3
MS.gene96922.t1	AT1G66410	39.474	114	63	2	29	140	1	110	1.43e-22	86.3
MS.gene96922.t1	AT3G50360	35.766	137	86	1	4	140	27	161	1.69e-22	87.8
MS.gene96922.t1	AT4G14640	37.600	125	76	1	18	142	9	131	2.20e-22	86.3
MS.gene96922.t1	AT2G41100	36.601	153	82	2	4	141	66	218	2.54e-22	89.7
MS.gene96922.t1	AT2G41100	34.375	128	70	2	28	141	1	128	5.43e-16	72.8
MS.gene96922.t1	AT2G41100	36.601	153	82	2	4	141	66	218	2.54e-22	89.7
MS.gene96922.t1	AT2G41100	34.375	128	70	2	28	141	1	128	5.43e-16	72.8
MS.gene96922.t1	AT2G41100	36.601	153	82	2	4	141	66	218	2.54e-22	89.7
MS.gene96922.t1	AT2G41100	34.375	128	70	2	28	141	1	128	5.43e-16	72.8
MS.gene96922.t1	AT3G43810	38.393	112	67	1	29	140	1	110	4.50e-22	85.1
MS.gene96922.t1	AT3G43810	38.393	112	67	1	29	140	1	110	4.50e-22	85.1
MS.gene96922.t1	AT4G20780	34.416	154	83	2	5	140	30	183	5.28e-22	87.0
MS.gene96922.t1	AT2G41090	34.307	137	85	1	4	140	12	143	4.03e-21	84.7
MS.gene96922.t1	AT3G50770	30.986	142	95	2	3	141	63	204	4.46e-21	85.1
MS.gene96922.t1	AT1G21550	36.184	152	79	4	3	142	9	154	1.41e-20	82.4
MS.gene96922.t1	AT1G76650	34.307	137	87	1	4	140	43	176	4.57e-20	81.6
MS.gene96922.t1	AT1G76650	34.307	137	87	1	4	140	43	176	4.57e-20	81.6
MS.gene96922.t1	AT1G76640	33.577	137	91	0	4	140	22	158	6.78e-20	80.9
MS.gene96922.t1	AT5G44460	34.247	146	86	2	5	140	29	174	8.79e-20	80.9
MS.gene96922.t1	AT4G04695	35.714	140	78	4	5	140	337	468	9.53e-20	84.3
MS.gene96922.t1	AT4G23650	36.429	140	77	4	5	140	384	515	1.34e-19	84.3
MS.gene96922.t1	AT3G25600	28.986	138	98	0	4	141	12	149	1.49e-19	79.7
MS.gene96922.t1	AT4G21940	37.143	140	76	4	5	140	407	538	2.13e-19	83.6
MS.gene96922.t1	AT4G21940	37.143	140	76	4	5	140	407	538	2.15e-19	83.6
MS.gene96922.t1	AT3G51920	32.168	143	90	3	2	140	7	146	6.02e-19	78.2
MS.gene96922.t1	AT1G50700	36.429	140	77	4	5	140	379	510	8.92e-19	81.6
MS.gene96922.t1	AT3G20410	37.143	140	76	4	5	140	397	528	9.22e-19	81.6
MS.gene96922.t1	AT3G20410	37.143	140	76	4	5	140	397	528	9.22e-19	81.6
MS.gene96922.t1	AT4G04700	35.714	140	78	4	5	140	337	468	9.65e-19	81.6
MS.gene96922.t1	AT4G04720	36.429	140	77	4	5	140	385	516	1.90e-18	80.9
MS.gene96922.t1	AT4G04720	36.429	140	77	4	5	140	385	516	1.90e-18	80.9
MS.gene96922.t1	AT5G19360	36.232	138	80	3	5	140	374	505	2.83e-18	80.5
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT4G04740	36.429	140	77	4	5	140	374	505	3.97e-18	80.1
MS.gene96922.t1	AT3G01830	36.170	141	82	5	3	140	10	145	3.98e-18	75.9
MS.gene96922.t1	AT1G76650	34.307	137	77	2	4	140	43	166	5.39e-18	75.9
MS.gene96922.t1	AT1G76040	35.714	140	78	4	5	140	179	310	6.67e-18	78.6
MS.gene96922.t1	AT1G76040	35.714	140	78	4	5	140	179	310	6.67e-18	78.6
MS.gene96922.t1	AT5G12180	35.507	138	81	3	5	140	379	510	1.60e-17	78.2
MS.gene96922.t1	AT1G76040	35.714	140	78	4	5	140	417	548	1.67e-17	78.2
MS.gene96922.t1	AT1G61950	35.507	138	81	3	5	140	405	536	3.57e-17	77.4
MS.gene96922.t1	AT3G03000	34.074	135	84	2	4	136	20	151	9.49e-17	72.8
MS.gene96922.t1	AT3G03000	37.838	74	46	0	2	75	92	165	7.06e-11	57.4
MS.gene96922.t1	AT3G03410	29.630	135	84	1	6	140	4	127	1.37e-16	71.6
MS.gene96922.t1	AT3G51850	31.884	138	91	1	3	140	358	492	3.12e-16	74.7
MS.gene96922.t1	AT1G74740	38.849	139	76	4	5	140	365	497	3.49e-16	74.3
MS.gene96922.t1	AT4G04710	34.286	140	80	4	5	140	324	455	4.70e-16	73.9
MS.gene96922.t1	AT4G04710	34.286	140	80	4	5	140	338	469	4.76e-16	73.9
MS.gene96922.t1	AT4G04710	34.286	140	80	4	5	140	351	482	5.09e-16	73.9
MS.gene96922.t1	AT5G17480	61.404	57	21	1	8	64	13	68	2.77e-15	66.6
MS.gene96922.t1	AT4G04710	33.803	142	80	5	5	140	351	484	7.66e-15	70.5
MS.gene96922.t1	AT5G66210	33.333	147	76	5	4	140	369	503	1.71e-14	69.7
MS.gene96922.t1	AT5G66210	33.333	147	76	5	4	140	369	503	1.71e-14	69.7
MS.gene96922.t1	AT1G62820	31.206	141	85	3	5	141	14	146	1.95e-14	66.2
MS.gene96922.t1	AT3G22930	36.082	97	60	1	4	100	35	129	2.19e-14	65.9
MS.gene96922.t1	AT1G50700	30.723	166	77	5	5	140	379	536	2.74e-14	68.9
MS.gene96922.t1	AT1G18890	35.971	139	80	4	5	140	369	501	2.82e-14	68.9
MS.gene96922.t1	AT2G41100	32.000	125	70	1	32	141	4	128	4.33e-14	66.6
MS.gene96922.t1	AT1G12310	30.612	147	87	4	2	141	8	146	8.99e-14	64.7
MS.gene96922.t1	AT4G36070	30.986	142	88	5	3	140	377	512	1.31e-13	67.0
MS.gene96922.t1	AT4G36070	30.986	142	88	5	3	140	377	512	1.41e-13	67.0
MS.gene96922.t1	AT3G03430	56.140	57	24	1	8	64	13	68	1.66e-13	62.0
MS.gene96922.t1	AT4G14640	34.694	98	62	1	4	101	13	108	3.19e-13	62.4
MS.gene96922.t1	AT2G41860	31.618	136	90	1	5	140	360	492	4.45e-13	65.5
MS.gene96922.t1	AT1G35670	32.857	140	81	4	5	140	332	462	4.61e-13	65.5
MS.gene96922.t1	AT2G41860	31.618	136	90	1	5	140	360	492	4.90e-13	65.5
MS.gene96922.t1	AT3G57530	33.577	137	85	3	5	140	369	500	1.09e-12	64.3
MS.gene96922.t1	AT4G09570	32.857	140	81	4	5	140	331	461	1.26e-12	64.3
MS.gene96922.t1	AT5G12480	31.387	137	90	2	5	140	271	404	2.55e-12	63.2
MS.gene96922.t1	AT5G07320	27.941	136	90	1	5	140	38	165	2.63e-12	63.2
MS.gene96922.t1	AT5G12480	31.387	137	90	2	5	140	365	498	2.74e-12	63.2
MS.gene96922.t1	AT2G17290	30.769	143	80	5	5	140	391	521	5.25e-12	62.4
MS.gene96922.t1	AT2G17290	30.769	143	80	5	5	140	391	521	5.25e-12	62.4
MS.gene96922.t1	AT2G17890	30.496	141	88	5	4	140	415	549	5.83e-12	62.4
MS.gene96922.t1	AT5G51050	28.777	139	91	1	2	140	49	179	1.00e-11	61.6
MS.gene96922.t1	AT3G10660	28.986	138	89	3	5	140	492	622	1.62e-11	61.2
MS.gene96922.t1	AT3G10660	28.986	138	89	3	5	140	492	622	1.62e-11	61.2
MS.gene96922.t1	AT5G04870	30.216	139	86	4	5	140	456	586	2.17e-11	60.8
MS.gene96922.t1	AT5G66210	37.273	110	53	3	4	103	369	472	2.37e-11	60.5
MS.gene96922.t1	AT5G61810	27.941	136	90	1	5	140	37	164	3.26e-11	60.1
MS.gene96922.t1	AT5G23580	28.986	138	89	3	5	140	328	458	3.68e-11	60.1
MS.gene96922.t1	AT5G66210	35.294	119	61	3	4	112	369	481	9.20e-11	58.9

Find 34 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTGCTGCTGCTGCCGCTGC+TGG	0.181901	1.4:+31645609	MS.gene96922:CDS
TACTTCATCGGAAGTTGGTT+TGG	0.343185	1.4:-31645508	None:intergenic
GAAGAGATGCTTTCGAAGCT+TGG	0.383501	1.4:+31645483	MS.gene96922:CDS
TTGCTGCTGCTGCCGCTGCT+GGG	0.386164	1.4:+31645610	MS.gene96922:CDS
CGTCCTTGTCCAGGTCATAA+AGG	0.423636	1.4:-31645662	None:intergenic
CACATCGTTCTTAACAAACT+TGG	0.425233	1.4:+31645708	MS.gene96922:CDS
CATCATTTGCTTTACTTCAT+CGG	0.443977	1.4:-31645520	None:intergenic
TGCTGCCGCTGCTGGGAAAG+AGG	0.481306	1.4:+31645617	MS.gene96922:CDS
TGCTTTCGACCTTTATGACC+TGG	0.493063	1.4:+31645653	MS.gene96922:CDS
TGCTTTACTTCATCGGAAGT+TGG	0.497249	1.4:-31645513	None:intergenic
CGATGAAGTAAAGCAAATGA+TGG	0.500040	1.4:+31645521	MS.gene96922:CDS
TTCAATAAGTTTGACAAGAA+CGG	0.516849	1.4:+31645432	MS.gene96922:CDS
AGATGAGACCGTCCTTGTCC+AGG	0.520231	1.4:-31645671	None:intergenic
TGAGGAGTTCAAGAAGATGA+TGG	0.534080	1.4:+31645806	MS.gene96922:CDS
GTTGCGAATCTCGTCATCCA+TGG	0.537699	1.4:-31645406	None:intergenic
AAGGTTGACGCGGATGGAGA+TGG	0.551637	1.4:+31645771	MS.gene96922:CDS
ATAAGCAAGGTTGACGCGGA+TGG	0.557348	1.4:+31645765	MS.gene96922:CDS
AGATGGAAAAGTTAACTTTG+AGG	0.561239	1.4:+31645788	MS.gene96922:CDS
CGACCTTTATGACCTGGACA+AGG	0.572735	1.4:+31645659	MS.gene96922:CDS
CATATTGATCAGAACGGCGA+CGG	0.579697	1.4:+31645546	MS.gene96922:CDS
AGAACGATGTGCAGTTCTGT+GGG	0.590061	1.4:-31645696	None:intergenic
TGCCGCTGCTGGGAAAGAGG+AGG	0.590208	1.4:+31645620	MS.gene96922:CDS
CTCCTCCTCTTTCCCAGCAG+CGG	0.601275	1.4:-31645622	None:intergenic
TGACGGAAAGATCTCTGTCT+CGG	0.614544	1.4:+31645455	MS.gene96922:CDS
CAGCAGCAGCAACGTTGCGG+TGG	0.616612	1.4:-31645599	None:intergenic
CATTCTCTGACAATCACTGA+GGG	0.618343	1.4:-31645742	None:intergenic
AAGTTTGACAAGAACGGTGA+CGG	0.620500	1.4:+31645438	MS.gene96922:CDS
AAGAACGATGTGCAGTTCTG+TGG	0.629284	1.4:-31645697	None:intergenic
CGGCAGCAGCAGCAACGTTG+CGG	0.643733	1.4:-31645602	None:intergenic
AATGATAAGCAAGGTTGACG+CGG	0.647152	1.4:+31645761	MS.gene96922:CDS
ATGGAACATATTGATCAGAA+CGG	0.650158	1.4:+31645540	MS.gene96922:CDS
CTTTATGACCTGGACAAGGA+CGG	0.650611	1.4:+31645663	MS.gene96922:CDS
TTGTCAGAGAATGATAAGCA+AGG	0.687328	1.4:+31645752	MS.gene96922:CDS
TCATTCTCTGACAATCACTG+AGG	0.714288	1.4:-31645743	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCAATAAGTTTGACAAGAA+CGG	+	chr1.4:31645432-31645451	MS.gene96922:CDS	25.0%
	AGATGGAAAAGTTAACTTTG+AGG	+	chr1.4:31645788-31645807	MS.gene96922:CDS	30.0%
	ATGGAACATATTGATCAGAA+CGG	+	chr1.4:31645540-31645559	MS.gene96922:CDS	30.0%
	CATCATTTGCTTTACTTCAT+CGG	-	chr1.4:31645523-31645542	None:intergenic	30.0%
	CACATCGTTCTTAACAAACT+TGG	+	chr1.4:31645708-31645727	MS.gene96922:CDS	35.0%
	CGATGAAGTAAAGCAAATGA+TGG	+	chr1.4:31645521-31645540	MS.gene96922:CDS	35.0%
	TTGTCAGAGAATGATAAGCA+AGG	+	chr1.4:31645752-31645771	MS.gene96922:CDS	35.0%
	AAGTTTGACAAGAACGGTGA+CGG	+	chr1.4:31645438-31645457	MS.gene96922:CDS	40.0%
	AATGATAAGCAAGGTTGACG+CGG	+	chr1.4:31645761-31645780	MS.gene96922:CDS	40.0%
	CATTCTCTGACAATCACTGA+GGG	-	chr1.4:31645745-31645764	None:intergenic	40.0%
	TCATTCTCTGACAATCACTG+AGG	-	chr1.4:31645746-31645765	None:intergenic	40.0%
	TGAGGAGTTCAAGAAGATGA+TGG	+	chr1.4:31645806-31645825	MS.gene96922:CDS	40.0%
	TGCTTTACTTCATCGGAAGT+TGG	-	chr1.4:31645516-31645535	None:intergenic	40.0%
!	TACTTCATCGGAAGTTGGTT+TGG	-	chr1.4:31645511-31645530	None:intergenic	40.0%
	AAGAACGATGTGCAGTTCTG+TGG	-	chr1.4:31645700-31645719	None:intergenic	45.0%
	AGAACGATGTGCAGTTCTGT+GGG	-	chr1.4:31645699-31645718	None:intergenic	45.0%
	CATATTGATCAGAACGGCGA+CGG	+	chr1.4:31645546-31645565	MS.gene96922:CDS	45.0%
	CTTTATGACCTGGACAAGGA+CGG	+	chr1.4:31645663-31645682	MS.gene96922:CDS	45.0%
	GAAGAGATGCTTTCGAAGCT+TGG	+	chr1.4:31645483-31645502	MS.gene96922:CDS	45.0%
	TGACGGAAAGATCTCTGTCT+CGG	+	chr1.4:31645455-31645474	MS.gene96922:CDS	45.0%
	TGCTTTCGACCTTTATGACC+TGG	+	chr1.4:31645653-31645672	MS.gene96922:CDS	45.0%
	ATAAGCAAGGTTGACGCGGA+TGG	+	chr1.4:31645765-31645784	MS.gene96922:CDS	50.0%
	CGACCTTTATGACCTGGACA+AGG	+	chr1.4:31645659-31645678	MS.gene96922:CDS	50.0%
	CGTCCTTGTCCAGGTCATAA+AGG	-	chr1.4:31645665-31645684	None:intergenic	50.0%
	AAGGTTGACGCGGATGGAGA+TGG	+	chr1.4:31645771-31645790	MS.gene96922:CDS	55.0%
	AGATGAGACCGTCCTTGTCC+AGG	-	chr1.4:31645674-31645693	None:intergenic	55.0%
	CTCCTCCTCTTTCCCAGCAG+CGG	-	chr1.4:31645625-31645644	None:intergenic	60.0%
	CAGCAGCAGCAACGTTGCGG+TGG	-	chr1.4:31645602-31645621	None:intergenic	65.0%
	CGGCAGCAGCAGCAACGTTG+CGG	-	chr1.4:31645605-31645624	None:intergenic	65.0%
	TGCCGCTGCTGGGAAAGAGG+AGG	+	chr1.4:31645620-31645639	MS.gene96922:CDS	65.0%
	TGCTGCCGCTGCTGGGAAAG+AGG	+	chr1.4:31645617-31645636	MS.gene96922:CDS	65.0%
	TTGCTGCTGCTGCCGCTGCT+GGG	+	chr1.4:31645610-31645629	MS.gene96922:CDS	65.0%
	GTTGCTGCTGCTGCCGCTGC+TGG	+	chr1.4:31645609-31645628	MS.gene96922:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	31645408	31645836	31645408	ID=MS.gene96922
chr1.4	mRNA	31645408	31645836	31645408	ID=MS.gene96922.t1;Parent=MS.gene96922
chr1.4	exon	31645408	31645836	31645408	ID=MS.gene96922.t1.exon1;Parent=MS.gene96922.t1
chr1.4	CDS	31645408	31645836	31645408	ID=cds.MS.gene96922.t1;Parent=MS.gene96922.t1

Gene Sequence

>MS.gene96922

ATGGATGACGAGATTCGCAACATCTTCAATAAGTTTGACAAGAACGGTGACGGAAAGATCTCTGTCTCGGAACTAGAAGAGATGCTTTCGAAGCTTGGATCCAAACCAACTTCCGATGAAGTAAAGCAAATGATGGAACATATTGATCAGAACGGCGACGGTTACATTGATCTTGTAGAATTCGCGAAATTCCACCGCAACGTTGCTGCTGCTGCCGCTGCTGGGAAAGAGGAGGAGATTCGTGATGCTTTCGACCTTTATGACCTGGACAAGGACGGTCTCATCTCTCCCACAGAACTGCACATCGTTCTTAACAAACTTGGTGAGAAGTGCTCCCTCAGTGATTGTCAGAGAATGATAAGCAAGGTTGACGCGGATGGAGATGGAAAAGTTAACTTTGAGGAGTTCAAGAAGATGATGGCTCACTGA

Protein sequence

>MS.gene96922.t1

MDDEIRNIFNKFDKNGDGKISVSELEEMLSKLGSKPTSDEVKQMMEHIDQNGDGYIDLVEFAKFHRNVAAAAAAGKEEEIRDAFDLYDLDKDGLISPTELHIVLNKLGEKCSLSDCQRMISKVDADGDGKVNFEEFKKMMAH