AlfalfaGEDB | MS.gene64308

M. sativa cultivar XinJiangDaYe / MS.gene64308

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64308.t1	XP_013467196.1	85.2	142	21	0	1	142	1	142	9.70E-46	193

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64308.t1	Q9LE22	48.6	138	65	1	3	140	22	153	2.3e-27	123.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64308.t1	A0A072VHE0	85.2	142	21	0	1	142	1	142	7.0e-46	193.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene013748	MS.gene64308	PPI
MS.gene55545	MS.gene64308	PPI
MS.gene64308	MS.gene29794	PPI
MS.gene008225	MS.gene64308	PPI
MS.gene64308	MS.gene71511	PPI
MS.gene64308	MS.gene001381	PPI
MS.gene64308	MS.gene033361	PPI
MS.gene64308	MS.gene87673	PPI
MS.gene011400	MS.gene64308	PPI
MS.gene64308	MS.gene53659	PPI
MS.gene024717	MS.gene64308	PPI
MS.gene64308	MS.gene061768	PPI
MS.gene64308	MS.gene89216	PPI
MS.gene64308	MS.gene47195	PPI
MS.gene64313	MS.gene64308	PPI
MS.gene64308	MS.gene47134	PPI
MS.gene64308	MS.gene017446	PPI
MS.gene64308	MS.gene96914	PPI
MS.gene35563	MS.gene64308	PPI
MS.gene97948	MS.gene64308	PPI
MS.gene55496	MS.gene64308	PPI
MS.gene003880	MS.gene64308	PPI
MS.gene64308	MS.gene96913	PPI
MS.gene49271	MS.gene64308	PPI
MS.gene67281	MS.gene64308	PPI
MS.gene62540	MS.gene64308	PPI
MS.gene64308	MS.gene07422	PPI
MS.gene64308	MS.gene023648	PPI
MS.gene025777	MS.gene64308	PPI
MS.gene062239	MS.gene64308	PPI
MS.gene46886	MS.gene64308	PPI
MS.gene64308	MS.gene64316	PPI
MS.gene21155	MS.gene64308	PPI
MS.gene92775	MS.gene64308	PPI
MS.gene64308	MS.gene026618	PPI
MS.gene21932	MS.gene64308	PPI
MS.gene28338	MS.gene64308	PPI
MS.gene027655	MS.gene64308	PPI
MS.gene64311	MS.gene64308	PPI
MS.gene64308	MS.gene53648	PPI
MS.gene056383	MS.gene64308	PPI
MS.gene64308	MS.gene008831	PPI
MS.gene64308	MS.gene55545	PPI
MS.gene64324	MS.gene64308	PPI
MS.gene64308	MS.gene056461	PPI
MS.gene022455	MS.gene64308	PPI
MS.gene64308	MS.gene64310	PPI
MS.gene015470	MS.gene64308	PPI
MS.gene64308	MS.gene29459	PPI
MS.gene041795	MS.gene64308	PPI
MS.gene64308	MS.gene71207	PPI
MS.gene64308	MS.gene35562	PPI
MS.gene63000	MS.gene64308	PPI
MS.gene22553	MS.gene64308	PPI
MS.gene53662	MS.gene64308	PPI
MS.gene53648	MS.gene64308	PPI
MS.gene64308	MS.gene060446	PPI
MS.gene64308	MS.gene21696	PPI
MS.gene038456	MS.gene64308	PPI
MS.gene64308	MS.gene29793	PPI
MS.gene64308	MS.gene98294	PPI
MS.gene64308	MS.gene53465	PPI
MS.gene64308	MS.gene074045	PPI
MS.gene64308	MS.gene03228	PPI
MS.gene54637	MS.gene64308	PPI
MS.gene004899	MS.gene64308	PPI
MS.gene64308	MS.gene46237	PPI
MS.gene64308	MS.gene64317	PPI
MS.gene009021	MS.gene64308	PPI
MS.gene64308	MS.gene93087	PPI
MS.gene87673	MS.gene64308	PPI
MS.gene64308	MS.gene046988	PPI
MS.gene05284	MS.gene64308	PPI
MS.gene64308	MS.gene057293	PPI
MS.gene074100	MS.gene64308	PPI
MS.gene64308	MS.gene74452	PPI
MS.gene64308	MS.gene09934	PPI
MS.gene065998	MS.gene64308	PPI
MS.gene64308	MS.gene79028	PPI
MS.gene63281	MS.gene64308	PPI
MS.gene68345	MS.gene64308	PPI
MS.gene44354	MS.gene64308	PPI
MS.gene001246	MS.gene64308	PPI
MS.gene040127	MS.gene64308	PPI
MS.gene62258	MS.gene64308	PPI
MS.gene64308	MS.gene026940	PPI
MS.gene64308	MS.gene65954	PPI
MS.gene000724	MS.gene64308	PPI
MS.gene64308	MS.gene98295	PPI
MS.gene64308	MS.gene022456	PPI
MS.gene74452	MS.gene64308	PPI
MS.gene64308	MS.gene85596	PPI
MS.gene64308	MS.gene96922	PPI
MS.gene64308	MS.gene025797	PPI
MS.gene64308	MS.gene21931	PPI
MS.gene036602	MS.gene64308	PPI
MS.gene27879	MS.gene64308	PPI
MS.gene64308	MS.gene64314	PPI
MS.gene040331	MS.gene64308	PPI
MS.gene64308	MS.gene09960	PPI
MS.gene58906	MS.gene64308	PPI
MS.gene64308	MS.gene94551	PPI
MS.gene58860	MS.gene64308	PPI
MS.gene27516	MS.gene64308	PPI
MS.gene64308	MS.gene80714	PPI
MS.gene053319	MS.gene64308	PPI
MS.gene04915	MS.gene64308	PPI
MS.gene64308	MS.gene53650	PPI
MS.gene61009	MS.gene64308	PPI
MS.gene64327	MS.gene64308	PPI
MS.gene000738	MS.gene64308	PPI
MS.gene64308	MS.gene02545	PPI
MS.gene64307	MS.gene64308	PPI
MS.gene061261	MS.gene64308	PPI
MS.gene04917	MS.gene64308	PPI
MS.gene64308	MS.gene057167	PPI
MS.gene64308	MS.gene93763	PPI
MS.gene64308	MS.gene49270	PPI
MS.gene036930	MS.gene64308	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64308.t1	MTR_1g046950	83.099	142	24	0	1	142	1	142	2.59e-80	233
MS.gene64308.t1	MTR_1g047100	82.979	141	23	1	1	141	1	140	1.08e-79	231
MS.gene64308.t1	MTR_5g079340	70.833	144	35	2	1	142	1	139	4.72e-66	197
MS.gene64308.t1	MTR_3g067610	62.857	140	46	1	3	142	4	137	4.03e-62	187
MS.gene64308.t1	MTR_5g008705	73.077	130	33	1	12	141	2	129	2.47e-61	185
MS.gene64308.t1	MTR_5g008695	73.913	115	30	0	28	142	1	115	2.36e-57	174
MS.gene64308.t1	MTR_8g107110	56.522	138	57	1	3	140	23	157	8.08e-50	157
MS.gene64308.t1	MTR_6g079570	54.286	140	60	2	3	141	25	161	6.25e-48	152
MS.gene64308.t1	MTR_1g032070	47.826	138	70	1	3	140	45	180	7.84e-41	135
MS.gene64308.t1	MTR_4g067270	45.000	140	73	2	3	140	4	141	5.06e-36	121
MS.gene64308.t1	MTR_8g036075	49.306	144	65	4	4	140	49	191	6.00e-36	122
MS.gene64308.t1	MTR_8g105230	44.030	134	73	1	4	137	36	167	2.30e-35	121
MS.gene64308.t1	MTR_7g075040	46.259	147	72	4	1	140	44	190	5.78e-34	117
MS.gene64308.t1	MTR_7g089760	46.043	139	71	2	4	140	5	141	1.36e-33	115
MS.gene64308.t1	MTR_6g023460	43.066	137	67	2	8	140	12	141	1.48e-32	112
MS.gene64308.t1	MTR_1g076650	41.176	136	78	1	5	140	13	146	7.53e-30	105
MS.gene64308.t1	MTR_1g076650	44.595	74	38	1	72	142	2	75	2.95e-11	58.2
MS.gene64308.t1	MTR_1g076650	42.857	63	36	0	2	64	83	145	7.75e-11	57.0
MS.gene64308.t1	MTR_4g086260	40.714	140	79	1	3	142	56	191	8.59e-30	107
MS.gene64308.t1	MTR_6g025320	40.141	142	73	2	4	140	12	146	1.92e-29	104
MS.gene64308.t1	MTR_6g025320	45.312	64	35	0	79	142	12	75	4.88e-13	62.8
MS.gene64308.t1	MTR_1g041285	40.876	137	79	1	4	140	12	146	1.98e-29	104
MS.gene64308.t1	MTR_1g041285	43.750	64	36	0	79	142	12	75	8.88e-11	56.6
MS.gene64308.t1	MTR_7g087610	39.437	142	74	2	4	140	12	146	2.01e-29	104
MS.gene64308.t1	MTR_7g087610	45.312	64	35	0	79	142	12	75	5.72e-13	62.4
MS.gene64308.t1	MTR_5g088320	40.141	142	73	2	4	140	12	146	2.05e-29	104
MS.gene64308.t1	MTR_5g088320	45.312	64	35	0	79	142	12	75	4.39e-13	62.8
MS.gene64308.t1	MTR_7g090450	40.000	140	81	3	4	140	73	212	2.45e-29	106
MS.gene64308.t1	MTR_5g017510	41.429	140	76	3	3	140	47	182	9.50e-29	104
MS.gene64308.t1	MTR_5g017510	39.437	71	43	0	2	72	119	189	1.70e-11	59.3
MS.gene64308.t1	MTR_5g017560	41.429	140	76	3	3	140	47	182	9.50e-29	104
MS.gene64308.t1	MTR_5g017560	39.437	71	43	0	2	72	119	189	1.70e-11	59.3
MS.gene64308.t1	MTR_5g017550	39.130	138	81	1	3	140	47	181	3.46e-28	102
MS.gene64308.t1	MTR_5g017550	40.845	71	42	0	2	72	118	188	1.06e-11	59.7
MS.gene64308.t1	MTR_2g098890	41.429	140	80	1	3	140	63	202	1.89e-27	101
MS.gene64308.t1	MTR_4g112460	32.143	140	95	0	3	142	10	149	3.34e-26	97.1
MS.gene64308.t1	MTR_3g089070	37.313	134	81	1	7	140	9	139	5.86e-26	95.9
MS.gene64308.t1	MTR_3g089090	37.313	134	81	1	7	140	8	138	6.09e-26	95.5
MS.gene64308.t1	MTR_4g103655	37.857	140	78	2	4	140	6	139	1.73e-25	94.4
MS.gene64308.t1	MTR_4g115170	39.610	154	77	3	3	140	63	216	1.78e-25	96.7
MS.gene64308.t1	MTR_4g103650	37.143	140	79	2	4	140	2	135	2.95e-25	94.0
MS.gene64308.t1	MTR_4g103630	38.298	141	76	2	4	140	6	139	3.43e-25	93.6
MS.gene64308.t1	MTR_8g066630	33.813	139	91	1	4	141	17	155	3.49e-25	94.4
MS.gene64308.t1	MTR_7g074240	38.356	146	80	3	5	140	25	170	3.47e-24	92.4
MS.gene64308.t1	MTR_3g083470	35.664	143	74	3	1	140	90	217	7.48e-24	92.8
MS.gene64308.t1	MTR_1g071150	37.226	137	83	1	4	140	12	145	8.84e-24	90.5
MS.gene64308.t1	MTR_1g071150	42.857	63	36	0	1	63	81	143	5.45e-11	57.4
MS.gene64308.t1	MTR_8g069915	31.250	144	96	1	2	142	7	150	8.74e-23	88.6
MS.gene64308.t1	MTR_0168s0120	38.393	112	67	1	29	140	1	110	3.07e-22	85.5
MS.gene64308.t1	MTR_6g025320	38.393	112	67	1	29	140	1	110	3.07e-22	85.5
MS.gene64308.t1	MTR_8g078270	31.884	138	90	2	5	141	54	188	8.83e-21	83.6
MS.gene64308.t1	MTR_5g089320	35.714	140	82	3	5	142	374	507	4.53e-20	85.5
MS.gene64308.t1	MTR_7g115040	35.606	132	83	1	9	140	17	146	8.73e-20	80.1
MS.gene64308.t1	MTR_6g007613	34.532	139	89	1	4	142	29	165	3.61e-19	79.0
MS.gene64308.t1	MTR_1g046960	65.000	60	20	1	28	87	1	59	4.41e-19	77.0
MS.gene64308.t1	MTR_5g009830	35.915	142	79	4	5	142	372	505	9.53e-19	81.6
MS.gene64308.t1	MTR_3g051770	36.000	150	80	4	2	140	383	527	1.37e-18	81.3
MS.gene64308.t1	MTR_4g132070	35.000	140	79	4	5	140	397	528	1.60e-18	80.9
MS.gene64308.t1	MTR_5g092810	36.170	141	76	4	5	140	398	529	1.65e-18	80.9
MS.gene64308.t1	MTR_8g099095	35.211	142	80	4	5	142	372	505	3.08e-18	80.1
MS.gene64308.t1	MTR_0028s0170	34.286	140	84	3	5	142	384	517	4.09e-18	79.7
MS.gene64308.t1	MTR_1g030440	33.571	140	91	1	3	140	21	160	4.83e-18	76.3
MS.gene64308.t1	MTR_7g074020	33.803	142	82	2	4	140	30	164	7.81e-18	75.5
MS.gene64308.t1	MTR_1g026190	34.507	142	81	4	5	142	388	521	1.64e-17	78.2
MS.gene64308.t1	MTR_5g027000	31.008	129	87	1	9	137	27	153	4.83e-17	73.2
MS.gene64308.t1	MTR_5g079470	58.730	63	22	2	8	67	14	75	1.53e-15	67.4
MS.gene64308.t1	MTR_5g011850	30.345	145	93	4	2	142	7	147	4.01e-15	68.2
MS.gene64308.t1	MTR_3g088655	30.000	150	89	4	4	140	8	154	4.55e-15	68.2
MS.gene64308.t1	MTR_6g007613	33.594	128	73	2	4	126	29	149	7.82e-15	67.4
MS.gene64308.t1	MTR_6g007613	37.879	66	41	0	76	141	26	91	9.80e-11	56.6
MS.gene64308.t1	MTR_7g091890	34.091	132	84	1	9	140	368	496	3.04e-14	68.9
MS.gene64308.t1	MTR_4g107490	32.847	137	87	3	5	140	379	511	3.16e-14	68.9
MS.gene64308.t1	MTR_7g068710	31.884	138	91	1	3	140	360	494	3.45e-14	68.6
MS.gene64308.t1	MTR_7g074020	32.540	126	73	2	4	124	30	148	3.91e-14	65.9
MS.gene64308.t1	MTR_4g132040	33.333	141	80	4	5	140	401	532	6.12e-14	67.8
MS.gene64308.t1	MTR_3g055570	30.435	138	79	1	4	141	52	172	8.08e-14	65.5
MS.gene64308.t1	MTR_3g098090	29.577	142	87	4	5	142	338	470	8.92e-13	64.7
MS.gene64308.t1	MTR_8g096050	30.216	139	89	2	2	140	53	183	9.48e-13	64.3
MS.gene64308.t1	MTR_3g098070	29.577	142	87	4	5	142	335	467	1.26e-12	64.3
MS.gene64308.t1	MTR_5g022030	29.787	141	89	5	4	140	406	540	2.88e-12	63.2
MS.gene64308.t1	MTR_1g096490	31.915	141	85	4	5	142	336	468	3.29e-12	62.8
MS.gene64308.t1	MTR_3g055510	29.661	118	63	2	25	142	38	135	4.09e-12	60.1
MS.gene64308.t1	MTR_1g054865	31.655	139	84	4	5	140	467	597	5.90e-12	62.4
MS.gene64308.t1	MTR_4g066660	29.286	140	91	3	3	140	376	509	6.76e-12	62.0
MS.gene64308.t1	MTR_3g098460	29.412	136	88	2	5	140	34	161	2.70e-11	60.5
MS.gene64308.t1	MTR_8g095440	28.276	145	85	5	5	142	336	468	3.18e-11	60.1
MS.gene64308.t1	MTR_7g106710	30.882	136	85	3	9	142	445	573	4.47e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64308.t1	AT1G18210	55.396	139	56	1	3	141	22	154	7.41e-51	160
MS.gene64308.t1	AT1G18210	55.396	139	56	1	3	141	22	154	7.41e-51	160
MS.gene64308.t1	AT1G73630	54.286	140	58	1	2	141	18	151	6.34e-49	154
MS.gene64308.t1	AT1G66400	50.000	138	69	0	3	140	14	151	1.34e-46	148
MS.gene64308.t1	AT5G37770	49.645	141	69	1	3	141	16	156	6.20e-45	144
MS.gene64308.t1	AT5G37770	49.645	141	69	1	3	141	16	156	6.20e-45	144
MS.gene64308.t1	AT1G24620	45.652	138	73	1	4	141	37	172	4.48e-37	125
MS.gene64308.t1	AT3G07490	48.921	139	67	2	4	140	5	141	1.57e-35	120
MS.gene64308.t1	AT2G15680	43.885	139	74	1	3	141	49	183	2.25e-35	121
MS.gene64308.t1	AT5G17470	45.000	140	71	2	5	141	3	139	1.79e-34	117
MS.gene64308.t1	AT1G05990	44.604	139	74	2	4	140	5	142	6.51e-34	116
MS.gene64308.t1	AT2G36180	46.269	134	71	1	8	140	4	137	3.86e-32	111
MS.gene64308.t1	AT4G03290	41.549	142	80	2	4	142	5	146	4.69e-32	111
MS.gene64308.t1	AT2G43290	42.466	146	71	3	4	140	65	206	2.04e-31	112
MS.gene64308.t1	AT3G03400	38.760	129	79	0	5	133	6	134	2.15e-31	109
MS.gene64308.t1	AT3G10190	43.571	140	72	4	4	140	70	205	1.01e-30	110
MS.gene64308.t1	AT4G12860	43.165	139	75	2	4	140	5	141	3.28e-30	107
MS.gene64308.t1	AT5G37780	40.141	142	73	2	4	140	12	146	6.73e-30	106
MS.gene64308.t1	AT5G37780	43.750	64	36	0	79	142	12	75	1.78e-12	61.2
MS.gene64308.t1	AT1G66410	40.141	142	73	2	4	140	12	146	6.73e-30	106
MS.gene64308.t1	AT1G66410	43.750	64	36	0	79	142	12	75	1.78e-12	61.2
MS.gene64308.t1	AT5G21274	40.845	142	72	2	4	140	12	146	9.23e-30	105
MS.gene64308.t1	AT5G21274	45.312	64	35	0	79	142	12	75	4.80e-13	62.8
MS.gene64308.t1	AT3G43810	40.141	142	73	2	4	140	12	146	2.02e-29	104
MS.gene64308.t1	AT3G43810	45.312	64	35	0	79	142	12	75	5.11e-13	62.8
MS.gene64308.t1	AT3G56800	40.141	142	73	2	4	140	12	146	2.08e-29	104
MS.gene64308.t1	AT3G56800	45.312	64	35	0	79	142	12	75	4.85e-13	62.8
MS.gene64308.t1	AT2G27030	40.141	142	73	2	4	140	12	146	2.08e-29	104
MS.gene64308.t1	AT2G27030	45.312	64	35	0	79	142	12	75	4.85e-13	62.8
MS.gene64308.t1	AT2G41110	40.141	142	73	2	4	140	12	146	2.08e-29	104
MS.gene64308.t1	AT2G41110	45.312	64	35	0	79	142	12	75	4.85e-13	62.8
MS.gene64308.t1	AT2G27030	40.141	142	73	2	4	140	12	146	4.73e-29	104
MS.gene64308.t1	AT2G27030	45.312	64	35	0	79	142	12	75	1.10e-12	62.4
MS.gene64308.t1	AT3G59440	40.288	139	78	2	4	140	51	186	6.67e-29	104
MS.gene64308.t1	AT3G43810	39.416	137	81	1	4	140	12	146	2.24e-28	103
MS.gene64308.t1	AT3G43810	45.312	64	35	0	79	142	12	75	2.37e-12	62.0
MS.gene64308.t1	AT3G22930	39.416	137	81	1	4	140	35	169	5.68e-28	102
MS.gene64308.t1	AT4G14640	39.416	137	81	1	4	140	13	147	3.23e-27	99.4
MS.gene64308.t1	AT5G42380	36.232	138	87	1	3	140	48	184	3.18e-26	97.8
MS.gene64308.t1	AT2G41110	37.013	154	73	3	4	140	12	158	7.00e-26	96.3
MS.gene64308.t1	AT2G41110	38.158	76	35	1	79	142	12	87	9.23e-11	57.0
MS.gene64308.t1	AT5G37780	36.306	157	73	3	4	140	12	161	1.07e-25	95.9
MS.gene64308.t1	AT1G18530	31.724	145	96	1	1	142	1	145	1.48e-25	95.1
MS.gene64308.t1	AT2G41100	38.562	153	80	2	4	142	12	164	1.98e-25	98.6
MS.gene64308.t1	AT2G41100	37.255	153	81	2	4	141	101	253	1.50e-23	93.6
MS.gene64308.t1	AT2G41100	38.562	153	80	2	4	142	12	164	1.98e-25	98.6
MS.gene64308.t1	AT2G41100	37.255	153	81	2	4	141	101	253	1.50e-23	93.6
MS.gene64308.t1	AT2G41410	37.143	140	85	3	4	141	70	208	2.18e-25	96.3
MS.gene64308.t1	AT1G32250	32.394	142	92	1	3	140	15	156	2.47e-25	94.7
MS.gene64308.t1	AT4G37010	37.410	139	85	1	4	142	27	163	1.01e-24	93.2
MS.gene64308.t1	AT4G37010	37.410	139	85	1	4	142	31	167	1.18e-24	93.2
MS.gene64308.t1	AT5G37780	39.062	128	66	2	18	140	13	133	2.08e-24	91.7
MS.gene64308.t1	AT1G66410	39.062	128	66	2	18	140	36	156	3.78e-24	91.7
MS.gene64308.t1	AT5G37780	38.211	123	74	1	18	140	52	172	6.73e-24	91.7
MS.gene64308.t1	AT2G41100	37.255	153	81	2	4	141	66	218	9.13e-24	93.6
MS.gene64308.t1	AT2G41100	35.659	129	69	2	28	142	1	129	3.01e-17	76.3
MS.gene64308.t1	AT2G41100	37.255	153	81	2	4	141	66	218	9.13e-24	93.6
MS.gene64308.t1	AT2G41100	35.659	129	69	2	28	142	1	129	3.01e-17	76.3
MS.gene64308.t1	AT2G41100	37.255	153	81	2	4	141	66	218	9.13e-24	93.6
MS.gene64308.t1	AT2G41100	35.659	129	69	2	28	142	1	129	3.01e-17	76.3
MS.gene64308.t1	AT4G20780	35.065	154	82	2	5	140	30	183	9.71e-24	91.7
MS.gene64308.t1	AT3G50360	35.252	139	88	1	4	142	27	163	2.12e-23	90.1
MS.gene64308.t1	AT1G66410	39.316	117	59	2	29	140	1	110	1.05e-22	86.7
MS.gene64308.t1	AT1G66410	39.316	117	59	2	29	140	1	110	1.05e-22	86.7
MS.gene64308.t1	AT4G14640	38.211	123	74	1	18	140	9	129	3.11e-22	85.9
MS.gene64308.t1	AT3G43810	38.393	112	67	1	29	140	1	110	3.21e-22	85.5
MS.gene64308.t1	AT3G43810	38.393	112	67	1	29	140	1	110	3.21e-22	85.5
MS.gene64308.t1	AT3G25600	29.496	139	98	0	4	142	12	150	4.22e-22	86.7
MS.gene64308.t1	AT1G76650	35.766	137	85	1	4	140	43	176	6.65e-22	86.3
MS.gene64308.t1	AT1G76650	35.766	137	85	1	4	140	43	176	6.65e-22	86.3
MS.gene64308.t1	AT3G50770	31.690	142	94	2	3	141	63	204	8.74e-22	86.7
MS.gene64308.t1	AT1G76640	33.577	137	91	0	4	140	22	158	2.91e-21	84.3
MS.gene64308.t1	AT3G51920	32.394	142	91	2	2	140	7	146	4.33e-21	83.6
MS.gene64308.t1	AT2G41090	33.577	137	86	1	4	140	12	143	1.30e-20	83.6
MS.gene64308.t1	AT5G44460	33.562	146	87	2	5	140	29	174	1.91e-20	82.8
MS.gene64308.t1	AT4G04695	35.714	140	78	4	5	140	337	468	2.07e-20	86.3
MS.gene64308.t1	AT1G76650	35.766	137	75	2	4	140	43	166	9.07e-20	80.5
MS.gene64308.t1	AT4G04700	35.714	140	78	4	5	140	337	468	2.41e-19	83.2
MS.gene64308.t1	AT1G21550	36.667	150	77	5	3	140	9	152	4.08e-19	78.6
MS.gene64308.t1	AT4G23650	35.915	142	79	4	5	142	384	517	4.42e-19	82.8
MS.gene64308.t1	AT4G21940	37.143	140	76	4	5	140	407	538	1.28e-18	81.3
MS.gene64308.t1	AT4G21940	37.143	140	76	4	5	140	407	538	1.33e-18	81.3
MS.gene64308.t1	AT5G19360	35.714	140	82	3	5	142	374	507	2.14e-18	80.9
MS.gene64308.t1	AT4G04720	36.429	140	77	4	5	140	385	516	2.26e-18	80.5
MS.gene64308.t1	AT4G04720	36.429	140	77	4	5	140	385	516	2.26e-18	80.5
MS.gene64308.t1	AT3G01830	36.170	141	82	5	3	140	10	145	2.28e-18	76.6
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.31e-18	79.7
MS.gene64308.t1	AT1G50700	36.429	140	77	4	5	140	379	510	6.15e-18	79.3
MS.gene64308.t1	AT3G20410	37.143	140	76	4	5	140	397	528	6.53e-18	79.3
MS.gene64308.t1	AT3G20410	37.143	140	76	4	5	140	397	528	6.53e-18	79.3
MS.gene64308.t1	AT3G03000	31.159	138	94	1	4	141	20	156	8.52e-18	75.5
MS.gene64308.t1	AT3G03000	40.323	62	37	0	2	63	92	153	1.82e-11	58.9
MS.gene64308.t1	AT5G12180	35.000	140	83	3	5	142	379	512	1.34e-17	78.6
MS.gene64308.t1	AT3G03410	29.630	135	84	1	6	140	4	127	2.19e-17	73.6
MS.gene64308.t1	AT1G76040	35.211	142	80	4	5	142	179	312	4.76e-17	76.3
MS.gene64308.t1	AT1G76040	35.211	142	80	4	5	142	179	312	4.76e-17	76.3
MS.gene64308.t1	AT1G76040	35.211	142	80	4	5	142	417	550	1.10e-16	75.9
MS.gene64308.t1	AT1G61950	35.507	138	81	3	5	140	405	536	2.38e-16	74.7
MS.gene64308.t1	AT3G51850	31.884	138	91	1	3	140	358	492	2.75e-16	74.7
MS.gene64308.t1	AT1G74740	39.716	141	72	5	5	140	365	497	4.67e-16	73.9
MS.gene64308.t1	AT2G41100	35.200	125	66	2	32	141	4	128	1.35e-15	70.5
MS.gene64308.t1	AT4G04710	34.286	140	80	4	5	140	324	455	3.47e-15	71.6
MS.gene64308.t1	AT4G04710	34.286	140	80	4	5	140	351	482	3.70e-15	71.6
MS.gene64308.t1	AT5G17480	62.963	54	19	1	8	61	13	65	3.70e-15	66.6
MS.gene64308.t1	AT4G04710	34.286	140	80	4	5	140	338	469	4.09e-15	71.2
MS.gene64308.t1	AT1G62820	29.496	139	93	3	5	142	14	148	9.55e-15	67.0
MS.gene64308.t1	AT3G22930	36.082	97	60	1	4	100	35	129	1.29e-14	66.2
MS.gene64308.t1	AT1G18890	36.879	141	76	5	5	140	369	501	3.63e-14	68.6
MS.gene64308.t1	AT1G12310	28.966	145	95	4	2	142	8	148	4.01e-14	65.5
MS.gene64308.t1	AT4G04710	33.803	142	80	5	5	140	351	484	5.10e-14	68.2
MS.gene64308.t1	AT5G66210	32.624	141	85	5	4	140	369	503	9.56e-14	67.4
MS.gene64308.t1	AT5G66210	32.624	141	85	5	4	140	369	503	9.56e-14	67.4
MS.gene64308.t1	AT3G03430	57.407	54	22	1	8	61	13	65	1.14e-13	62.8
MS.gene64308.t1	AT1G50700	30.723	166	77	5	5	140	379	536	1.55e-13	67.0
MS.gene64308.t1	AT4G36070	30.986	142	88	5	3	140	377	512	1.74e-13	66.6
MS.gene64308.t1	AT3G57530	34.307	137	84	3	5	140	369	500	1.78e-13	66.6
MS.gene64308.t1	AT4G36070	30.986	142	88	5	3	140	377	512	1.91e-13	66.6
MS.gene64308.t1	AT2G41860	32.353	136	89	1	5	140	360	492	2.02e-13	66.6
MS.gene64308.t1	AT2G41860	32.353	136	89	1	5	140	360	492	2.04e-13	66.6
MS.gene64308.t1	AT1G35670	32.394	142	83	4	5	142	332	464	2.39e-13	66.2
MS.gene64308.t1	AT4G14640	34.694	98	62	1	4	101	13	108	3.95e-13	62.4
MS.gene64308.t1	AT4G09570	32.394	142	83	4	5	142	331	463	5.04e-13	65.5
MS.gene64308.t1	AT2G17290	31.034	145	81	5	5	142	391	523	9.14e-13	64.7
MS.gene64308.t1	AT2G17290	31.034	145	81	5	5	142	391	523	9.14e-13	64.7
MS.gene64308.t1	AT5G12480	31.387	137	90	2	5	140	271	404	2.06e-12	63.5
MS.gene64308.t1	AT5G12480	31.387	137	90	2	5	140	365	498	2.09e-12	63.5
MS.gene64308.t1	AT2G17890	30.496	141	88	5	4	140	415	549	3.20e-12	63.2
MS.gene64308.t1	AT3G10660	28.571	140	91	3	5	142	492	624	3.74e-12	62.8
MS.gene64308.t1	AT3G10660	28.571	140	91	3	5	142	492	624	3.74e-12	62.8
MS.gene64308.t1	AT5G07320	27.941	136	90	1	5	140	38	165	4.10e-12	62.8
MS.gene64308.t1	AT5G04870	29.787	141	88	4	5	142	456	588	5.30e-12	62.4
MS.gene64308.t1	AT5G23580	29.286	140	90	3	5	142	328	460	8.66e-12	61.6
MS.gene64308.t1	AT5G51050	29.496	139	90	2	2	140	49	179	1.69e-11	60.8
MS.gene64308.t1	AT4G38230	31.690	142	84	4	5	142	186	318	3.81e-11	59.7
MS.gene64308.t1	AT4G35310	31.690	142	84	4	5	142	403	535	4.66e-11	59.7
MS.gene64308.t1	AT4G35310	31.690	142	84	4	5	142	403	535	4.66e-11	59.7
MS.gene64308.t1	AT4G38230	31.690	142	84	4	5	142	330	462	4.72e-11	59.7
MS.gene64308.t1	AT4G38230	31.690	142	84	4	5	142	330	462	4.72e-11	59.7
MS.gene64308.t1	AT4G38230	31.690	142	84	4	5	142	360	492	5.06e-11	59.7
MS.gene64308.t1	AT3G51850	32.653	98	63	1	3	100	358	452	7.57e-11	58.9

Find 31 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACTTCATCGGAAGTTGGTT+TGG	0.343185	1.3:-28504578	None:intergenic
GAAGAGATGCTTTCGAAGCT+TGG	0.383501	1.3:+28504553	MS.gene64308:CDS
CAACCTTGCTTATCATTCTC+TGG	0.413354	1.3:-28504825	None:intergenic
CACATCGTTCTTAACAAACT+TGG	0.425233	1.3:+28504778	MS.gene64308:CDS
TCATTCTCTGGCAGTCACTA+AGG	0.435599	1.3:-28504813	None:intergenic
CATCATTTGCTTTACTTCAT+CGG	0.443977	1.3:-28504590	None:intergenic
TGCTGCTGCTGCTGGGAAAG+AGG	0.454181	1.3:+28504687	MS.gene64308:CDS
TGCTTTACTTCATCGGAAGT+TGG	0.497249	1.3:-28504583	None:intergenic
CGATGAAGTAAAGCAAATGA+TGG	0.500040	1.3:+28504591	MS.gene64308:CDS
TTCAATAAGTTTGACAAGAA+CGG	0.516849	1.3:+28504502	MS.gene64308:CDS
TGAGGAGTTCAAGAAGATGA+TGG	0.534080	1.3:+28504876	MS.gene64308:CDS
GTTGCGAATCTCGTCATCCA+TGG	0.537699	1.3:-28504476	None:intergenic
AAGGTTGACGCGGATGGAGA+TGG	0.551637	1.3:+28504841	MS.gene64308:CDS
CGTCCTTGTCAAGGTCGTAA+AGG	0.554520	1.3:-28504732	None:intergenic
ATAAGCAAGGTTGACGCGGA+TGG	0.557348	1.3:+28504835	MS.gene64308:CDS
CATTCTCTGGCAGTCACTAA+GGG	0.558199	1.3:-28504812	None:intergenic
AGATGGAAAAGTTAACTTTG+AGG	0.561239	1.3:+28504858	MS.gene64308:CDS
CATATTGATCAGAACGGCGA+CGG	0.579697	1.3:+28504616	MS.gene64308:CDS
CAGCAGCAGAATCGTTGCGG+TGG	0.584505	1.3:-28504669	None:intergenic
AGAACGATGTGCAGTTCTGT+GGG	0.590061	1.3:-28504766	None:intergenic
AGATGAGACCGTCCTTGTCA+AGG	0.608858	1.3:-28504741	None:intergenic
TGACCTTTACGACCTTGACA+AGG	0.613792	1.3:+28504729	MS.gene64308:CDS
TGACGGAAAGATCTCTGTCT+CGG	0.614544	1.3:+28504525	MS.gene64308:CDS
AAGTTTGACAAGAACGGTGA+CGG	0.620500	1.3:+28504508	MS.gene64308:CDS
CTTTACGACCTTGACAAGGA+CGG	0.623390	1.3:+28504733	MS.gene64308:CDS
AAGAACGATGTGCAGTTCTG+TGG	0.629284	1.3:-28504767	None:intergenic
AATGATAAGCAAGGTTGACG+CGG	0.647152	1.3:+28504831	MS.gene64308:CDS
CAGCAGCAGCAGAATCGTTG+CGG	0.648494	1.3:-28504672	None:intergenic
ATGGAACATATTGATCAGAA+CGG	0.650158	1.3:+28504610	MS.gene64308:CDS
TGCTGCTGCTGGGAAAGAGG+AGG	0.650225	1.3:+28504690	MS.gene64308:CDS
CTGCCAGAGAATGATAAGCA+AGG	0.677388	1.3:+28504822	MS.gene64308:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCAATAAGTTTGACAAGAA+CGG	+	chr1.3:28504502-28504521	MS.gene64308:CDS	25.0%
	AGATGGAAAAGTTAACTTTG+AGG	+	chr1.3:28504858-28504877	MS.gene64308:CDS	30.0%
	ATGGAACATATTGATCAGAA+CGG	+	chr1.3:28504610-28504629	MS.gene64308:CDS	30.0%
	CATCATTTGCTTTACTTCAT+CGG	-	chr1.3:28504593-28504612	None:intergenic	30.0%
	CACATCGTTCTTAACAAACT+TGG	+	chr1.3:28504778-28504797	MS.gene64308:CDS	35.0%
	CGATGAAGTAAAGCAAATGA+TGG	+	chr1.3:28504591-28504610	MS.gene64308:CDS	35.0%
	AAGTTTGACAAGAACGGTGA+CGG	+	chr1.3:28504508-28504527	MS.gene64308:CDS	40.0%
	AATGATAAGCAAGGTTGACG+CGG	+	chr1.3:28504831-28504850	MS.gene64308:CDS	40.0%
	CAACCTTGCTTATCATTCTC+TGG	-	chr1.3:28504828-28504847	None:intergenic	40.0%
	TGAGGAGTTCAAGAAGATGA+TGG	+	chr1.3:28504876-28504895	MS.gene64308:CDS	40.0%
	TGCTTTACTTCATCGGAAGT+TGG	-	chr1.3:28504586-28504605	None:intergenic	40.0%
!	TACTTCATCGGAAGTTGGTT+TGG	-	chr1.3:28504581-28504600	None:intergenic	40.0%
	AAGAACGATGTGCAGTTCTG+TGG	-	chr1.3:28504770-28504789	None:intergenic	45.0%
	AGAACGATGTGCAGTTCTGT+GGG	-	chr1.3:28504769-28504788	None:intergenic	45.0%
	CATATTGATCAGAACGGCGA+CGG	+	chr1.3:28504616-28504635	MS.gene64308:CDS	45.0%
	CATTCTCTGGCAGTCACTAA+GGG	-	chr1.3:28504815-28504834	None:intergenic	45.0%
	CTGCCAGAGAATGATAAGCA+AGG	+	chr1.3:28504822-28504841	MS.gene64308:CDS	45.0%
	CTTTACGACCTTGACAAGGA+CGG	+	chr1.3:28504733-28504752	MS.gene64308:CDS	45.0%
	GAAGAGATGCTTTCGAAGCT+TGG	+	chr1.3:28504553-28504572	MS.gene64308:CDS	45.0%
	TCATTCTCTGGCAGTCACTA+AGG	-	chr1.3:28504816-28504835	None:intergenic	45.0%
	TGACCTTTACGACCTTGACA+AGG	+	chr1.3:28504729-28504748	MS.gene64308:CDS	45.0%
	TGACGGAAAGATCTCTGTCT+CGG	+	chr1.3:28504525-28504544	MS.gene64308:CDS	45.0%
	AGATGAGACCGTCCTTGTCA+AGG	-	chr1.3:28504744-28504763	None:intergenic	50.0%
	ATAAGCAAGGTTGACGCGGA+TGG	+	chr1.3:28504835-28504854	MS.gene64308:CDS	50.0%
	CGTCCTTGTCAAGGTCGTAA+AGG	-	chr1.3:28504735-28504754	None:intergenic	50.0%
	AAGGTTGACGCGGATGGAGA+TGG	+	chr1.3:28504841-28504860	MS.gene64308:CDS	55.0%
	ATTCTGCTGCTGCTGCTGCT+GGG	+	chr1.3:28504680-28504699	MS.gene64308:CDS	55.0%
	CAGCAGCAGCAGAATCGTTG+CGG	-	chr1.3:28504675-28504694	None:intergenic	55.0%
	CAGCAGCAGAATCGTTGCGG+TGG	-	chr1.3:28504672-28504691	None:intergenic	60.0%
	GATTCTGCTGCTGCTGCTGC+TGG	+	chr1.3:28504679-28504698	MS.gene64308:CDS	60.0%
	TGCTGCTGCTGCTGGGAAAG+AGG	+	chr1.3:28504687-28504706	MS.gene64308:CDS	60.0%
	TGCTGCTGCTGGGAAAGAGG+AGG	+	chr1.3:28504690-28504709	MS.gene64308:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	28504478	28504906	28504478	ID=MS.gene64308
chr1.3	mRNA	28504478	28504906	28504478	ID=MS.gene64308.t1;Parent=MS.gene64308
chr1.3	exon	28504478	28504906	28504478	ID=MS.gene64308.t1.exon1;Parent=MS.gene64308.t1
chr1.3	CDS	28504478	28504906	28504478	ID=cds.MS.gene64308.t1;Parent=MS.gene64308.t1

Gene Sequence

>MS.gene64308

ATGGATGACGAGATTCGCAACATCTTCAATAAGTTTGACAAGAACGGTGACGGAAAGATCTCTGTCTCGGAACTAGAAGAGATGCTTTCGAAGCTTGGATCCAAACCAACTTCCGATGAAGTAAAGCAAATGATGGAACATATTGATCAGAACGGCGACGGTTACATTGATCTTGAAGAATTCGCAAAAATCCACCGCAACGATTCTGCTGCTGCTGCTGCTGGGAAAGAGGAGGAGATTCGTGATGCTTTTGACCTTTACGACCTTGACAAGGACGGTCTCATCTCTCCCACAGAACTGCACATCGTTCTTAACAAACTTGGTGAGAAGTGCTCCCTTAGTGACTGCCAGAGAATGATAAGCAAGGTTGACGCGGATGGAGATGGAAAAGTTAACTTTGAGGAGTTCAAGAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene64308.t1

MDDEIRNIFNKFDKNGDGKISVSELEEMLSKLGSKPTSDEVKQMMEHIDQNGDGYIDLEEFAKIHRNDSAAAAAGKEEEIRDAFDLYDLDKDGLISPTELHIVLNKLGEKCSLSDCQRMISKVDADGDGKVNFEEFKKMMAR