AlfalfaGEDB | MS.gene017446

M. sativa cultivar XinJiangDaYe / MS.gene017446

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017446.t1	XP_003616365.1	98.6	138	2	0	1	138	1	138	1.20E-27	132.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017446.t1	Q9C9U8	59.9	137	52	1	2	138	18	151	2.2e-11	70.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017446.t1	G7K1X5	98.6	138	2	0	1	138	1	138	8.4e-28	132.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene013748	MS.gene017446	PPI
MS.gene28338	MS.gene017446	PPI
MS.gene017446	MS.gene21696	PPI
MS.gene94551	MS.gene017446	PPI
MS.gene017446	MS.gene29793	PPI
MS.gene65954	MS.gene017446	PPI
MS.gene017446	MS.gene022456	PPI
MS.gene008225	MS.gene017446	PPI
MS.gene027655	MS.gene017446	PPI
MS.gene017446	MS.gene53465	PPI
MS.gene017446	MS.gene074045	PPI
MS.gene056383	MS.gene017446	PPI
MS.gene017446	MS.gene85596	PPI
MS.gene017446	MS.gene96922	PPI
MS.gene64324	MS.gene017446	PPI
MS.gene011400	MS.gene017446	PPI
MS.gene015470	MS.gene017446	PPI
MS.gene017446	MS.gene64314	PPI
MS.gene024717	MS.gene017446	PPI
MS.gene64308	MS.gene017446	PPI
MS.gene017446	MS.gene94551	PPI
MS.gene22553	MS.gene017446	PPI
MS.gene53662	MS.gene017446	PPI
MS.gene017446	MS.gene93087	PPI
MS.gene35563	MS.gene017446	PPI
MS.gene55496	MS.gene017446	PPI
MS.gene003880	MS.gene017446	PPI
MS.gene017446	MS.gene046988	PPI
MS.gene54637	MS.gene017446	PPI
MS.gene49271	MS.gene017446	PPI
MS.gene67281	MS.gene017446	PPI
MS.gene017446	MS.gene057293	PPI
MS.gene62540	MS.gene017446	PPI
MS.gene017446	MS.gene53650	PPI
MS.gene025777	MS.gene017446	PPI
MS.gene062239	MS.gene017446	PPI
MS.gene017446	MS.gene79028	PPI
MS.gene21155	MS.gene017446	PPI
MS.gene92775	MS.gene017446	PPI
MS.gene017446	MS.gene026940	PPI
MS.gene21932	MS.gene017446	PPI
MS.gene017446	MS.gene98295	PPI
MS.gene47134	MS.gene017446	PPI
MS.gene017446	MS.gene025797	PPI
MS.gene017446	MS.gene21931	PPI
MS.gene022455	MS.gene017446	PPI
MS.gene017446	MS.gene001381	PPI
MS.gene87673	MS.gene017446	PPI
MS.gene05284	MS.gene017446	PPI
MS.gene017446	MS.gene53659	PPI
MS.gene041795	MS.gene017446	PPI
MS.gene017446	MS.gene09960	PPI
MS.gene63000	MS.gene017446	PPI
MS.gene017446	MS.gene061768	PPI
MS.gene017446	MS.gene47134	PPI
MS.gene96914	MS.gene017446	PPI
MS.gene53648	MS.gene017446	PPI
MS.gene017446	MS.gene80714	PPI
MS.gene44354	MS.gene017446	PPI
MS.gene017446	MS.gene96914	PPI
MS.gene017446	MS.gene02545	PPI
MS.gene017446	MS.gene96913	PPI
MS.gene017446	MS.gene057167	PPI
MS.gene038456	MS.gene017446	PPI
MS.gene74452	MS.gene017446	PPI
MS.gene017446	MS.gene93763	PPI
MS.gene017446	MS.gene49270	PPI
MS.gene004899	MS.gene017446	PPI
MS.gene036602	MS.gene017446	PPI
MS.gene009021	MS.gene017446	PPI
MS.gene017446	MS.gene026618	PPI
MS.gene017446	MS.gene29794	PPI
MS.gene017446	MS.gene008831	PPI
MS.gene017446	MS.gene71511	PPI
MS.gene017446	MS.gene033361	PPI
MS.gene017446	MS.gene056461	PPI
MS.gene04915	MS.gene017446	PPI
MS.gene074100	MS.gene017446	PPI
MS.gene017446	MS.gene89216	PPI
MS.gene065998	MS.gene017446	PPI
MS.gene017446	MS.gene35562	PPI
MS.gene017446	MS.gene47195	PPI
MS.gene63281	MS.gene017446	PPI
MS.gene68345	MS.gene017446	PPI
MS.gene036930	MS.gene017446	PPI
MS.gene017446	MS.gene060446	PPI
MS.gene001246	MS.gene017446	PPI
MS.gene040127	MS.gene017446	PPI
MS.gene017446	MS.gene07422	PPI
MS.gene62258	MS.gene017446	PPI
MS.gene017446	MS.gene023648	PPI
MS.gene55545	MS.gene017446	PPI
MS.gene000724	MS.gene017446	PPI
MS.gene017446	MS.gene64316	PPI
MS.gene017446	MS.gene98294	PPI
MS.gene64311	MS.gene017446	PPI
MS.gene017446	MS.gene03228	PPI
MS.gene27879	MS.gene017446	PPI
MS.gene040331	MS.gene017446	PPI
MS.gene017446	MS.gene46237	PPI
MS.gene58906	MS.gene017446	PPI
MS.gene017446	MS.gene64317	PPI
MS.gene58860	MS.gene017446	PPI
MS.gene64313	MS.gene017446	PPI
MS.gene27516	MS.gene017446	PPI
MS.gene053319	MS.gene017446	PPI
MS.gene49270	MS.gene017446	PPI
MS.gene97948	MS.gene017446	PPI
MS.gene017446	MS.gene64310	PPI
MS.gene61009	MS.gene017446	PPI
MS.gene64327	MS.gene017446	PPI
MS.gene000738	MS.gene017446	PPI
MS.gene017446	MS.gene29459	PPI
MS.gene64307	MS.gene017446	PPI
MS.gene061261	MS.gene017446	PPI
MS.gene017446	MS.gene71207	PPI
MS.gene022456	MS.gene017446	PPI
MS.gene04917	MS.gene017446	PPI
MS.gene017446	MS.gene09934	PPI
MS.gene46886	MS.gene017446	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017446.t1	MTR_5g079340	97.122	139	4	0	1	139	1	139	1.45e-94	269
MS.gene017446.t1	MTR_3g067610	73.723	137	33	1	3	139	4	137	1.44e-70	208
MS.gene017446.t1	MTR_1g047100	73.571	140	35	1	1	138	1	140	4.49e-69	204
MS.gene017446.t1	MTR_1g046950	70.833	144	35	2	1	139	1	142	1.67e-67	201
MS.gene017446.t1	MTR_5g008705	70.000	130	34	2	12	138	2	129	8.18e-56	171
MS.gene017446.t1	MTR_8g107110	59.259	135	55	0	3	137	23	157	7.86e-50	157
MS.gene017446.t1	MTR_5g008695	69.231	117	29	2	28	139	1	115	3.16e-49	154
MS.gene017446.t1	MTR_6g079570	56.204	137	59	1	3	138	25	161	3.89e-46	147
MS.gene017446.t1	MTR_1g032070	52.206	136	64	1	3	137	45	180	2.14e-42	139
MS.gene017446.t1	MTR_8g105230	50.000	132	65	1	4	134	36	167	8.47e-40	132
MS.gene017446.t1	MTR_7g075040	46.622	148	67	4	1	137	44	190	2.80e-34	118
MS.gene017446.t1	MTR_8g036075	50.694	144	60	4	4	137	49	191	5.26e-34	117
MS.gene017446.t1	MTR_4g067270	43.478	138	75	2	3	137	4	141	5.76e-34	116
MS.gene017446.t1	MTR_7g089760	47.445	137	69	2	4	137	5	141	3.40e-33	114
MS.gene017446.t1	MTR_6g023460	42.857	133	72	2	7	137	11	141	4.20e-32	111
MS.gene017446.t1	MTR_7g087610	42.963	135	76	1	4	137	12	146	2.35e-31	109
MS.gene017446.t1	MTR_7g087610	41.176	68	40	0	72	139	8	75	1.39e-12	61.2
MS.gene017446.t1	MTR_5g088320	43.704	135	75	1	4	137	12	146	2.88e-31	109
MS.gene017446.t1	MTR_5g088320	41.538	65	38	0	75	139	11	75	5.16e-12	59.7
MS.gene017446.t1	MTR_6g025320	43.704	135	75	1	4	137	12	146	3.39e-31	109
MS.gene017446.t1	MTR_6g025320	41.176	68	40	0	72	139	8	75	1.41e-12	61.2
MS.gene017446.t1	MTR_4g086260	43.796	137	76	1	3	139	56	191	9.82e-31	109
MS.gene017446.t1	MTR_5g017550	42.963	135	77	0	3	137	47	181	1.03e-30	109
MS.gene017446.t1	MTR_1g041285	42.963	135	76	1	4	137	12	146	3.10e-30	106
MS.gene017446.t1	MTR_1g076650	44.361	133	73	1	6	137	14	146	3.27e-30	106
MS.gene017446.t1	MTR_5g017510	41.912	136	78	1	3	137	47	182	7.77e-30	107
MS.gene017446.t1	MTR_5g017560	41.912	136	78	1	3	137	47	182	7.77e-30	107
MS.gene017446.t1	MTR_3g089070	40.152	132	75	2	8	137	10	139	6.19e-28	100
MS.gene017446.t1	MTR_3g089090	40.152	132	75	2	8	137	9	138	6.78e-28	100
MS.gene017446.t1	MTR_4g103650	39.552	134	81	0	4	137	2	135	1.15e-27	99.8
MS.gene017446.t1	MTR_2g098890	40.714	140	78	2	3	137	63	202	7.81e-27	99.8
MS.gene017446.t1	MTR_4g115170	42.857	154	69	4	3	137	63	216	8.65e-27	100
MS.gene017446.t1	MTR_4g103630	38.806	134	82	0	4	137	6	139	1.10e-26	97.4
MS.gene017446.t1	MTR_4g103655	38.806	134	82	0	4	137	6	139	1.22e-26	97.4
MS.gene017446.t1	MTR_8g066630	36.232	138	84	2	4	137	17	154	1.23e-26	98.2
MS.gene017446.t1	MTR_7g090450	39.437	142	76	4	4	137	73	212	1.26e-26	99.4
MS.gene017446.t1	MTR_8g078270	37.037	135	84	1	5	138	54	188	3.43e-25	95.1
MS.gene017446.t1	MTR_0168s0120	42.727	110	62	1	29	137	1	110	1.07e-23	89.0
MS.gene017446.t1	MTR_6g025320	42.727	110	62	1	29	137	1	110	1.07e-23	89.0
MS.gene017446.t1	MTR_4g112460	32.394	142	89	2	3	139	10	149	2.27e-23	89.7
MS.gene017446.t1	MTR_1g071150	37.500	136	81	2	4	137	12	145	4.91e-23	88.2
MS.gene017446.t1	MTR_3g083470	34.783	138	79	2	1	137	90	217	2.09e-22	89.0
MS.gene017446.t1	MTR_6g007613	35.766	137	87	1	4	139	29	165	2.72e-21	84.3
MS.gene017446.t1	MTR_7g074020	35.556	135	86	1	4	137	30	164	4.15e-21	84.0
MS.gene017446.t1	MTR_7g074020	35.135	74	45	1	65	138	22	92	9.57e-11	57.0
MS.gene017446.t1	MTR_8g069915	29.861	144	95	2	2	139	7	150	1.06e-20	82.8
MS.gene017446.t1	MTR_7g074240	36.301	146	80	3	5	137	25	170	1.48e-19	80.1
MS.gene017446.t1	MTR_5g027000	32.824	131	85	2	9	137	27	156	3.81e-19	78.6
MS.gene017446.t1	MTR_7g115040	36.923	130	81	1	9	137	17	146	3.06e-18	75.9
MS.gene017446.t1	MTR_5g079470	59.375	64	25	1	7	70	13	75	3.50e-18	73.9
MS.gene017446.t1	MTR_8g099095	35.556	135	82	2	5	137	372	503	7.75e-18	79.0
MS.gene017446.t1	MTR_5g092810	34.559	136	82	2	5	137	398	529	1.20e-17	78.6
MS.gene017446.t1	MTR_7g074020	34.454	119	77	1	4	121	30	148	1.38e-17	74.7
MS.gene017446.t1	MTR_5g011850	33.793	145	85	5	2	139	7	147	1.52e-17	74.3
MS.gene017446.t1	MTR_3g051770	34.532	139	85	1	5	137	389	527	1.56e-17	78.2
MS.gene017446.t1	MTR_4g132070	34.815	135	83	2	5	137	397	528	1.66e-17	78.2
MS.gene017446.t1	MTR_1g030440	34.247	146	79	3	3	137	21	160	2.40e-17	74.3
MS.gene017446.t1	MTR_6g007613	34.454	119	77	1	4	121	29	147	3.48e-17	73.6
MS.gene017446.t1	MTR_6g007613	36.486	74	45	1	65	138	20	91	3.31e-11	57.8
MS.gene017446.t1	MTR_5g009830	34.307	137	85	2	5	139	372	505	1.42e-16	75.5
MS.gene017446.t1	MTR_5g089320	33.577	137	86	3	5	139	374	507	1.73e-16	75.1
MS.gene017446.t1	MTR_3g055570	33.333	135	76	2	4	138	52	172	2.83e-16	71.6
MS.gene017446.t1	MTR_4g107490	33.582	134	87	2	5	137	379	511	1.72e-15	72.4
MS.gene017446.t1	MTR_0028s0170	32.593	135	86	3	5	137	384	515	3.67e-15	71.2
MS.gene017446.t1	MTR_1g026190	29.927	137	91	2	5	139	388	521	4.72e-15	70.9
MS.gene017446.t1	MTR_3g088655	33.987	153	76	6	4	137	8	154	4.08e-14	65.5
MS.gene017446.t1	MTR_7g068710	32.117	137	89	2	3	137	360	494	2.82e-13	65.9
MS.gene017446.t1	MTR_3g098090	31.655	139	85	4	5	139	338	470	3.01e-13	65.9
MS.gene017446.t1	MTR_4g066660	33.094	139	84	4	3	137	376	509	3.03e-13	65.9
MS.gene017446.t1	MTR_1g046960	68.421	38	12	0	28	65	1	38	4.99e-13	61.2
MS.gene017446.t1	MTR_3g098070	31.655	139	85	4	5	139	335	467	5.86e-13	65.1
MS.gene017446.t1	MTR_7g091890	32.824	131	84	2	9	137	368	496	6.05e-13	65.1
MS.gene017446.t1	MTR_4g132040	32.609	138	82	4	5	137	401	532	1.19e-12	63.9
MS.gene017446.t1	MTR_1g052530	32.593	135	87	2	5	137	358	490	1.62e-12	63.5
MS.gene017446.t1	MTR_1g096490	32.609	138	85	4	5	139	336	468	1.82e-12	63.5
MS.gene017446.t1	MTR_3g055510	31.000	100	53	1	40	139	52	135	1.48e-11	58.5
MS.gene017446.t1	MTR_8g095440	30.935	139	86	4	5	139	336	468	1.71e-11	60.8
MS.gene017446.t1	MTR_7g106710	31.298	131	88	1	9	139	445	573	4.01e-11	59.7
MS.gene017446.t1	MTR_7g084400	27.941	136	93	1	2	137	33	163	5.04e-11	59.3
MS.gene017446.t1	MTR_3g055585	27.820	133	82	1	4	136	52	170	7.64e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017446.t1	AT5G37770	55.319	141	58	1	3	138	16	156	3.05e-49	155
MS.gene017446.t1	AT5G37770	55.319	141	58	1	3	138	16	156	3.05e-49	155
MS.gene017446.t1	AT1G66400	55.797	138	58	2	3	137	14	151	8.96e-49	154
MS.gene017446.t1	AT1G18210	54.815	135	58	2	3	137	22	153	1.37e-47	151
MS.gene017446.t1	AT1G18210	54.815	135	58	2	3	137	22	153	1.37e-47	151
MS.gene017446.t1	AT1G73630	54.015	137	60	2	2	138	18	151	3.88e-46	147
MS.gene017446.t1	AT1G24620	49.265	136	68	1	4	138	37	172	1.82e-41	136
MS.gene017446.t1	AT2G15680	49.265	136	68	1	3	138	49	183	1.86e-40	134
MS.gene017446.t1	AT5G17470	46.763	139	67	2	5	138	3	139	7.29e-36	120
MS.gene017446.t1	AT1G05990	45.652	138	71	2	4	137	5	142	1.76e-34	117
MS.gene017446.t1	AT3G07490	46.715	137	70	2	4	137	5	141	7.58e-34	116
MS.gene017446.t1	AT2G36180	47.407	135	67	1	7	137	3	137	2.94e-33	114
MS.gene017446.t1	AT3G03400	44.444	126	67	1	8	130	9	134	3.99e-32	111
MS.gene017446.t1	AT5G37780	43.704	135	75	1	4	137	12	146	1.49e-31	110
MS.gene017446.t1	AT5G37780	40.000	65	39	0	75	139	11	75	2.15e-11	58.2
MS.gene017446.t1	AT1G66410	43.704	135	75	1	4	137	12	146	1.49e-31	110
MS.gene017446.t1	AT1G66410	40.000	65	39	0	75	139	11	75	2.15e-11	58.2
MS.gene017446.t1	AT5G21274	44.444	135	74	1	4	137	12	146	1.56e-31	110
MS.gene017446.t1	AT5G21274	41.176	68	40	0	72	139	8	75	1.49e-12	61.2
MS.gene017446.t1	AT3G10190	43.796	137	73	4	4	137	70	205	1.96e-31	111
MS.gene017446.t1	AT3G56800	43.704	135	75	1	4	137	12	146	3.48e-31	109
MS.gene017446.t1	AT3G56800	41.176	68	40	0	72	139	8	75	1.47e-12	61.2
MS.gene017446.t1	AT2G27030	43.704	135	75	1	4	137	12	146	3.48e-31	109
MS.gene017446.t1	AT2G27030	41.176	68	40	0	72	139	8	75	1.47e-12	61.2
MS.gene017446.t1	AT2G41110	43.704	135	75	1	4	137	12	146	3.48e-31	109
MS.gene017446.t1	AT2G41110	41.176	68	40	0	72	139	8	75	1.47e-12	61.2
MS.gene017446.t1	AT3G43810	43.704	135	75	1	4	137	12	146	3.56e-31	109
MS.gene017446.t1	AT3G43810	41.176	68	40	0	72	139	8	75	1.47e-12	61.2
MS.gene017446.t1	AT4G12860	45.985	137	71	2	4	137	5	141	4.08e-31	109
MS.gene017446.t1	AT2G43290	40.141	142	77	2	4	137	65	206	5.15e-31	110
MS.gene017446.t1	AT2G27030	43.704	135	75	1	4	137	12	146	1.08e-30	108
MS.gene017446.t1	AT2G27030	41.176	68	40	0	72	139	8	75	3.64e-12	60.8
MS.gene017446.t1	AT3G59440	40.441	136	79	1	4	137	51	186	2.77e-30	108
MS.gene017446.t1	AT4G03290	39.437	142	80	2	4	139	5	146	3.01e-30	107
MS.gene017446.t1	AT3G43810	43.704	135	75	1	4	137	12	146	3.81e-30	108
MS.gene017446.t1	AT3G43810	41.176	68	40	0	72	139	8	75	6.56e-12	60.8
MS.gene017446.t1	AT3G22930	40.741	135	79	1	4	137	35	169	1.11e-28	103
MS.gene017446.t1	AT4G37010	43.066	137	77	1	4	139	31	167	3.26e-28	102
MS.gene017446.t1	AT4G37010	43.066	137	77	1	4	139	27	163	3.53e-28	102
MS.gene017446.t1	AT2G41110	40.136	147	75	2	4	137	12	158	6.35e-28	101
MS.gene017446.t1	AT5G37780	39.333	150	75	2	4	137	12	161	2.96e-27	99.8
MS.gene017446.t1	AT4G14640	40.000	135	80	1	4	137	13	147	4.07e-27	99.0
MS.gene017446.t1	AT5G42380	40.146	137	80	1	3	137	48	184	3.76e-26	97.4
MS.gene017446.t1	AT2G41100	35.294	153	81	1	4	138	66	218	3.91e-26	99.8
MS.gene017446.t1	AT2G41100	31.783	129	71	1	28	139	1	129	2.40e-15	70.9
MS.gene017446.t1	AT2G41100	35.294	153	81	1	4	138	66	218	3.91e-26	99.8
MS.gene017446.t1	AT2G41100	31.783	129	71	1	28	139	1	129	2.40e-15	70.9
MS.gene017446.t1	AT2G41100	35.294	153	81	1	4	138	66	218	3.91e-26	99.8
MS.gene017446.t1	AT2G41100	31.783	129	71	1	28	139	1	129	2.40e-15	70.9
MS.gene017446.t1	AT2G41100	35.294	153	81	1	4	138	101	253	6.62e-26	99.8
MS.gene017446.t1	AT2G41100	35.294	153	82	1	4	139	12	164	3.51e-24	95.1
MS.gene017446.t1	AT2G41100	35.294	153	81	1	4	138	101	253	6.62e-26	99.8
MS.gene017446.t1	AT2G41100	35.294	153	82	1	4	139	12	164	3.51e-24	95.1
MS.gene017446.t1	AT3G50360	37.956	137	84	1	4	139	27	163	1.34e-25	95.5
MS.gene017446.t1	AT3G50360	40.625	64	38	0	75	138	26	89	7.89e-11	57.0
MS.gene017446.t1	AT5G37780	36.646	161	75	2	4	137	12	172	1.88e-25	95.5
MS.gene017446.t1	AT5G37780	42.149	121	69	1	18	137	13	133	2.37e-25	94.0
MS.gene017446.t1	AT1G66410	42.149	121	69	1	18	137	36	156	3.07e-25	94.4
MS.gene017446.t1	AT2G41410	38.849	139	81	3	4	138	70	208	8.25e-25	94.7
MS.gene017446.t1	AT2G41090	41.176	136	74	3	4	137	12	143	3.76e-24	92.4
MS.gene017446.t1	AT1G66410	43.519	108	60	1	31	137	3	110	5.14e-24	89.7
MS.gene017446.t1	AT1G66410	43.519	108	60	1	31	137	3	110	5.14e-24	89.7
MS.gene017446.t1	AT3G43810	42.727	110	62	1	29	137	1	110	1.12e-23	89.0
MS.gene017446.t1	AT3G43810	42.727	110	62	1	29	137	1	110	1.12e-23	89.0
MS.gene017446.t1	AT1G32250	32.394	142	89	2	3	137	15	156	1.55e-23	90.1
MS.gene017446.t1	AT1G18530	32.653	147	89	3	1	139	1	145	1.77e-23	89.7
MS.gene017446.t1	AT1G76650	36.567	134	85	0	4	137	43	176	2.56e-23	90.1
MS.gene017446.t1	AT1G76650	36.567	134	85	0	4	137	43	176	2.56e-23	90.1
MS.gene017446.t1	AT3G50770	33.803	142	88	2	3	138	63	204	3.84e-22	87.4
MS.gene017446.t1	AT4G14640	38.843	121	73	1	18	137	9	129	3.86e-22	85.5
MS.gene017446.t1	AT3G03410	34.586	133	79	2	5	137	3	127	3.66e-21	83.2
MS.gene017446.t1	AT1G76650	35.821	134	76	1	4	137	43	166	6.92e-21	83.6
MS.gene017446.t1	AT3G51920	32.143	140	91	2	2	137	7	146	7.26e-20	80.5
MS.gene017446.t1	AT4G20780	35.714	154	78	3	5	137	30	183	1.93e-19	80.1
MS.gene017446.t1	AT3G25600	29.078	141	93	2	4	139	12	150	2.03e-19	79.3
MS.gene017446.t1	AT1G76640	35.000	140	82	2	4	137	22	158	2.41e-19	79.3
MS.gene017446.t1	AT4G21940	36.296	135	81	2	5	137	407	538	1.23e-18	81.3
MS.gene017446.t1	AT4G21940	36.296	135	81	2	5	137	407	538	1.37e-18	81.3
MS.gene017446.t1	AT4G04720	37.037	135	80	2	5	137	385	516	1.39e-18	81.3
MS.gene017446.t1	AT4G04720	37.037	135	80	2	5	137	385	516	1.39e-18	81.3
MS.gene017446.t1	AT3G20410	36.765	136	79	2	5	137	397	528	1.76e-18	80.9
MS.gene017446.t1	AT3G20410	36.765	136	79	2	5	137	397	528	1.76e-18	80.9
MS.gene017446.t1	AT1G50700	36.029	136	80	2	5	137	379	510	2.85e-18	80.1
MS.gene017446.t1	AT4G04695	35.556	135	82	2	5	137	337	468	3.80e-18	79.7
MS.gene017446.t1	AT5G17480	57.812	64	26	1	7	70	12	74	7.30e-18	73.2
MS.gene017446.t1	AT3G03430	54.688	64	28	1	7	70	12	74	2.46e-17	72.0
MS.gene017446.t1	AT1G12310	33.562	146	84	5	2	139	8	148	2.73e-17	73.6
MS.gene017446.t1	AT4G04700	34.815	135	83	2	5	137	337	468	3.50e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT4G04740	36.496	137	78	4	5	137	374	505	4.40e-17	77.0
MS.gene017446.t1	AT2G41100	32.031	128	69	1	29	138	1	128	5.67e-17	73.9
MS.gene017446.t1	AT4G23650	33.577	137	86	2	5	139	384	517	6.97e-17	76.3
MS.gene017446.t1	AT5G19360	34.586	133	86	1	5	137	374	505	1.08e-16	75.9
MS.gene017446.t1	AT3G03000	32.857	140	84	3	4	137	20	155	2.77e-16	71.2
MS.gene017446.t1	AT3G03000	42.623	61	35	0	2	62	92	152	2.18e-11	58.5
MS.gene017446.t1	AT5G44460	36.184	152	72	4	5	137	29	174	2.77e-16	71.6
MS.gene017446.t1	AT1G61950	35.556	135	82	2	5	137	405	536	3.00e-16	74.3
MS.gene017446.t1	AT1G62820	32.143	140	85	4	5	139	14	148	3.34e-16	70.9
MS.gene017446.t1	AT5G12180	33.835	133	87	1	5	137	379	510	5.81e-16	73.6
MS.gene017446.t1	AT3G51850	33.577	137	87	2	3	137	358	492	1.53e-15	72.4
MS.gene017446.t1	AT1G74740	36.765	136	80	4	5	137	365	497	4.86e-15	70.9
MS.gene017446.t1	AT1G21550	33.333	150	79	4	3	137	9	152	7.29e-15	67.4
MS.gene017446.t1	AT3G22930	37.895	95	58	1	4	97	35	129	7.69e-15	67.0
MS.gene017446.t1	AT1G76040	32.117	137	88	3	5	139	179	312	8.86e-15	69.7
MS.gene017446.t1	AT1G76040	32.117	137	88	3	5	139	179	312	8.86e-15	69.7
MS.gene017446.t1	AT1G76040	32.117	137	88	3	5	139	417	550	1.61e-14	69.7
MS.gene017446.t1	AT1G18890	36.957	138	77	5	5	137	369	501	1.71e-14	69.3
MS.gene017446.t1	AT1G50700	30.247	162	80	3	5	137	379	536	1.37e-13	67.0
MS.gene017446.t1	AT3G01830	31.884	138	89	2	3	137	10	145	1.55e-13	63.9
MS.gene017446.t1	AT1G35670	32.609	138	85	4	5	139	332	464	8.12e-13	64.7
MS.gene017446.t1	AT4G14640	35.417	96	61	1	4	98	13	108	1.13e-12	60.8
MS.gene017446.t1	AT3G57530	34.559	136	82	4	5	137	369	500	1.43e-12	63.9
MS.gene017446.t1	AT5G12480	31.618	136	88	3	5	137	271	404	1.71e-12	63.5
MS.gene017446.t1	AT4G09570	33.094	139	83	5	5	139	331	463	1.75e-12	63.5
MS.gene017446.t1	AT5G12480	31.618	136	88	3	5	137	365	498	2.00e-12	63.5
MS.gene017446.t1	AT4G04710	33.083	133	88	1	5	137	324	455	2.26e-12	63.2
MS.gene017446.t1	AT4G04710	33.083	133	88	1	5	137	338	469	2.55e-12	63.2
MS.gene017446.t1	AT4G04710	33.083	133	88	1	5	137	351	482	2.77e-12	63.2
MS.gene017446.t1	AT5G23580	30.216	139	87	4	5	139	328	460	5.33e-12	62.4
MS.gene017446.t1	AT2G41860	30.370	135	90	2	5	137	360	492	1.29e-11	61.2
MS.gene017446.t1	AT2G41860	30.370	135	90	2	5	137	360	492	1.30e-11	61.2
MS.gene017446.t1	AT2G31500	32.374	139	85	5	5	137	372	507	1.75e-11	60.8
MS.gene017446.t1	AT4G04710	32.593	135	88	2	5	137	351	484	6.85e-11	58.9
MS.gene017446.t1	AT2G41100	37.313	67	42	0	72	138	8	74	9.00e-11	56.6
MS.gene017446.t1	AT5G51050	27.941	136	93	1	2	137	49	179	9.51e-11	58.5

Find 12 sgRNAs with CRISPR-Local

Find 17 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGTTCGGTGCAGTGAAAAT+CGG	0.467777	5.1:+61731754	None:intergenic
ATTAGTAATGTTGATGTTGA+CGG	0.468849	5.1:-61731590	MS.gene017446:CDS
AATGTTGATGTTGACGGTGA+TGG	0.518258	5.1:-61731584	MS.gene017446:CDS
CGAAGAGTTCAAGAAGATGA+TGG	0.555496	5.1:-61731549	MS.gene017446:CDS
CTTTACGATCTTGATAAGAA+CGG	0.558960	5.1:-61731692	MS.gene017446:CDS
CTTGCGCACTTCATCATCCA+TGG	0.574814	5.1:+61731940	None:intergenic
ATGGAGGAACTCGATCAAAA+CGG	0.591440	5.1:-61731806	MS.gene017446:CDS
GGAAGAAGTGAAACGCATGA+TGG	0.599297	5.1:-61731825	MS.gene017446:CDS
AAAGAAATGCTGTTATCACT+CGG	0.631161	5.1:-61731863	MS.gene017446:CDS
AGAAGTGAAACGCATGATGG+AGG	0.643947	5.1:-61731822	MS.gene017446:CDS
GAACTCGATCAAAACGGCGA+CGG	0.690843	5.1:-61731800	MS.gene017446:CDS
ACTCGGATCAGAAACGACAT+CGG	0.702600	5.1:-61731846	MS.gene017446:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTAGTAATGTTGATGTTGA+CGG	-	chr5.1:61731889-61731908	MS.gene017446:CDS	25.0%
	AAAGAAATGCTGTTATCACT+CGG	-	chr5.1:61731616-61731635	MS.gene017446:CDS	30.0%
	CTTTACGATCTTGATAAGAA+CGG	-	chr5.1:61731787-61731806	MS.gene017446:CDS	30.0%
	TTCAGCAAGTTCGACAAAAA+CGG	-	chr5.1:61731565-61731584	MS.gene017446:CDS	35.0%
!	AGATTCATCTTTTCCAGGTT+CGG	+	chr5.1:61731743-61731762	None:intergenic	35.0%
	AATGTTGATGTTGACGGTGA+TGG	-	chr5.1:61731895-61731914	MS.gene017446:CDS	40.0%
	ATGGAGGAACTCGATCAAAA+CGG	-	chr5.1:61731673-61731692	MS.gene017446:CDS	40.0%
	CGAAGAGTTCAAGAAGATGA+TGG	-	chr5.1:61731930-61731949	MS.gene017446:CDS	40.0%
!	TCGCTAGATTCATCTTTTCC+AGG	+	chr5.1:61731748-61731767	None:intergenic	40.0%
!!!	CACGCTGTTTTGAAGAAACT+CGG	-	chr5.1:61731832-61731851	MS.gene017446:CDS	40.0%
	AAGTTCGACAAAAACGGCGA+TGG	-	chr5.1:61731571-61731590	MS.gene017446:CDS	45.0%
	ACTCGGATCAGAAACGACAT+CGG	-	chr5.1:61731633-61731652	MS.gene017446:CDS	45.0%
	AGAAGTGAAACGCATGATGG+AGG	-	chr5.1:61731657-61731676	MS.gene017446:CDS	45.0%
	GGAAGAAGTGAAACGCATGA+TGG	-	chr5.1:61731654-61731673	MS.gene017446:CDS	45.0%
!!	AGGTTCGGTGCAGTGAAAAT+CGG	+	chr5.1:61731728-61731747	None:intergenic	45.0%
	GAACTCGATCAAAACGGCGA+CGG	-	chr5.1:61731679-61731698	MS.gene017446:CDS	50.0%
!	GATTTTCACTGCACCGAACC+TGG	-	chr5.1:61731727-61731746	MS.gene017446:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	61731541	61731960	61731541	ID=MS.gene017446
chr5.1	mRNA	61731541	61731960	61731541	ID=MS.gene017446.t1;Parent=MS.gene017446
chr5.1	exon	61731541	61731960	61731541	ID=MS.gene017446.t1.exon1;Parent=MS.gene017446.t1
chr5.1	CDS	61731541	61731960	61731541	ID=cds.MS.gene017446.t1;Parent=MS.gene017446.t1

Gene Sequence

>MS.gene017446

ATGGATGATGAAGTGCGCAAGATCTTCAGCAAGTTCGACAAAAACGGCGATGGAAAAATCTCACGCTCAGAACTGAAAGAAATGCTGTTATCACTCGGATCAGAAACGACATCGGAAGAAGTGAAACGCATGATGGAGGAACTCGATCAAAACGGCGACGGTTTCATTGATCTGAAAGAATTCACCGATTTTCACTGCACCGAACCTGGAAAAGATGAATCTAGCGAGCTTCGTGATGCTTTTGATCTTTACGATCTTGATAAGAACGGTTTGATTTCTGCTAATGAATTGCACGCTGTTTTGAAGAAACTCGGTGAGAAATGCTCGTTGAATGATTGTAAGAAGATGATTAGTAATGTTGATGTTGACGGTGATGGAAATGTTAACTTCGAAGAGTTCAAGAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene017446.t1

MDDEVRKIFSKFDKNGDGKISRSELKEMLLSLGSETTSEEVKRMMEELDQNGDGFIDLKEFTDFHCTEPGKDESSELRDAFDLYDLDKNGLISANELHAVLKKLGEKCSLNDCKKMISNVDVDGDGNVNFEEFKKMMAR