AlfalfaGEDB | MS.gene53659

M. sativa cultivar XinJiangDaYe / MS.gene53659

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53659.t1	XP_013467196.1	59.9	142	54	1	1	139	1	142	8.90E-20	106.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53659.t1	Q9C9U8	57.7	137	55	1	2	138	18	151	7.9e-09	61.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53659.t1	A0A072VHE0	59.9	142	54	1	1	139	1	142	6.4e-20	106.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene53659	MS.gene29459	PPI
MS.gene28338	MS.gene53659	PPI
MS.gene53659	MS.gene057293	PPI
MS.gene85596	MS.gene53659	PPI
MS.gene94551	MS.gene53659	PPI
MS.gene53659	MS.gene71207	PPI
MS.gene65954	MS.gene53659	PPI
MS.gene008225	MS.gene53659	PPI
MS.gene027655	MS.gene53659	PPI
MS.gene056383	MS.gene53659	PPI
MS.gene64324	MS.gene53659	PPI
MS.gene011400	MS.gene53659	PPI
MS.gene015470	MS.gene53659	PPI
MS.gene024717	MS.gene53659	PPI
MS.gene64308	MS.gene53659	PPI
MS.gene22553	MS.gene53659	PPI
MS.gene53662	MS.gene53659	PPI
MS.gene93087	MS.gene53659	PPI
MS.gene53659	MS.gene21696	PPI
MS.gene35563	MS.gene53659	PPI
MS.gene55496	MS.gene53659	PPI
MS.gene003880	MS.gene53659	PPI
MS.gene54637	MS.gene53659	PPI
MS.gene53659	MS.gene074045	PPI
MS.gene49271	MS.gene53659	PPI
MS.gene67281	MS.gene53659	PPI
MS.gene62540	MS.gene53659	PPI
MS.gene025777	MS.gene53659	PPI
MS.gene53659	MS.gene85596	PPI
MS.gene53659	MS.gene025797	PPI
MS.gene062239	MS.gene53659	PPI
MS.gene53659	MS.gene64314	PPI
MS.gene026940	MS.gene53659	PPI
MS.gene21155	MS.gene53659	PPI
MS.gene71207	MS.gene53659	PPI
MS.gene92775	MS.gene53659	PPI
MS.gene07422	MS.gene53659	PPI
MS.gene09934	MS.gene53659	PPI
MS.gene96922	MS.gene53659	PPI
MS.gene21932	MS.gene53659	PPI
MS.gene53659	MS.gene53650	PPI
MS.gene47134	MS.gene53659	PPI
MS.gene53659	MS.gene79028	PPI
MS.gene022455	MS.gene53659	PPI
MS.gene87673	MS.gene53659	PPI
MS.gene05284	MS.gene53659	PPI
MS.gene21931	MS.gene53659	PPI
MS.gene041795	MS.gene53659	PPI
MS.gene046988	MS.gene53659	PPI
MS.gene63000	MS.gene53659	PPI
MS.gene53659	MS.gene026940	PPI
MS.gene057293	MS.gene53659	PPI
MS.gene53659	MS.gene98295	PPI
MS.gene96914	MS.gene53659	PPI
MS.gene53648	MS.gene53659	PPI
MS.gene017446	MS.gene53659	PPI
MS.gene44354	MS.gene53659	PPI
MS.gene033361	MS.gene53659	PPI
MS.gene53659	MS.gene21931	PPI
MS.gene038456	MS.gene53659	PPI
MS.gene53659	MS.gene09960	PPI
MS.gene74452	MS.gene53659	PPI
MS.gene060446	MS.gene53659	PPI
MS.gene53659	MS.gene061768	PPI
MS.gene004899	MS.gene53659	PPI
MS.gene53659	MS.gene80714	PPI
MS.gene036602	MS.gene53659	PPI
MS.gene008831	MS.gene53659	PPI
MS.gene96913	MS.gene53659	PPI
MS.gene009021	MS.gene53659	PPI
MS.gene46237	MS.gene53659	PPI
MS.gene53659	MS.gene057167	PPI
MS.gene98295	MS.gene53659	PPI
MS.gene29793	MS.gene53659	PPI
MS.gene02545	MS.gene53659	PPI
MS.gene53659	MS.gene93763	PPI
MS.gene04915	MS.gene53659	PPI
MS.gene074100	MS.gene53659	PPI
MS.gene065998	MS.gene53659	PPI
MS.gene026618	MS.gene53659	PPI
MS.gene001381	MS.gene53659	PPI
MS.gene64316	MS.gene53659	PPI
MS.gene63281	MS.gene53659	PPI
MS.gene29794	MS.gene53659	PPI
MS.gene074045	MS.gene53659	PPI
MS.gene68345	MS.gene53659	PPI
MS.gene53659	MS.gene29794	PPI
MS.gene036930	MS.gene53659	PPI
MS.gene89216	MS.gene53659	PPI
MS.gene001246	MS.gene53659	PPI
MS.gene040127	MS.gene53659	PPI
MS.gene53659	MS.gene71511	PPI
MS.gene62258	MS.gene53659	PPI
MS.gene64310	MS.gene53659	PPI
MS.gene53659	MS.gene033361	PPI
MS.gene53659	MS.gene056461	PPI
MS.gene55545	MS.gene53659	PPI
MS.gene000724	MS.gene53659	PPI
MS.gene53659	MS.gene89216	PPI
MS.gene53659	MS.gene35562	PPI
MS.gene64311	MS.gene53659	PPI
MS.gene27879	MS.gene53659	PPI
MS.gene040331	MS.gene53659	PPI
MS.gene58906	MS.gene53659	PPI
MS.gene58860	MS.gene53659	PPI
MS.gene64313	MS.gene53659	PPI
MS.gene98294	MS.gene53659	PPI
MS.gene27516	MS.gene53659	PPI
MS.gene53659	MS.gene64316	PPI
MS.gene053319	MS.gene53659	PPI
MS.gene49270	MS.gene53659	PPI
MS.gene53659	MS.gene29793	PPI
MS.gene53659	MS.gene98294	PPI
MS.gene97948	MS.gene53659	PPI
MS.gene61009	MS.gene53659	PPI
MS.gene64327	MS.gene53659	PPI
MS.gene000738	MS.gene53659	PPI
MS.gene64307	MS.gene53659	PPI
MS.gene53465	MS.gene53659	PPI
MS.gene061261	MS.gene53659	PPI
MS.gene022456	MS.gene53659	PPI
MS.gene04917	MS.gene53659	PPI
MS.gene53659	MS.gene64317	PPI
MS.gene46886	MS.gene53659	PPI
MS.gene47195	MS.gene53659	PPI
MS.gene013748	MS.gene53659	PPI
MS.gene023648	MS.gene53659	PPI
MS.gene03228	MS.gene53659	PPI
MS.gene53659	MS.gene64310	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53659.t1	MTR_1g046950	75.352	142	32	1	1	139	1	142	3.94e-71	210
MS.gene53659.t1	MTR_1g047100	74.286	140	34	1	1	138	1	140	3.02e-66	197
MS.gene53659.t1	MTR_5g079340	69.784	139	42	0	1	139	1	139	9.02e-65	194
MS.gene53659.t1	MTR_3g067610	64.234	137	46	1	3	139	4	137	1.93e-60	182
MS.gene53659.t1	MTR_5g008705	68.750	128	39	1	12	138	2	129	1.66e-53	165
MS.gene53659.t1	MTR_5g008695	68.696	115	33	1	28	139	1	115	2.70e-48	151
MS.gene53659.t1	MTR_8g107110	54.815	135	61	0	3	137	23	157	5.90e-44	142
MS.gene53659.t1	MTR_6g079570	52.899	138	62	3	3	138	25	161	2.58e-42	138
MS.gene53659.t1	MTR_1g032070	44.853	136	74	1	3	137	45	180	1.40e-35	122
MS.gene53659.t1	MTR_7g075040	45.578	147	70	3	1	137	44	190	1.24e-32	114
MS.gene53659.t1	MTR_4g067270	45.324	139	71	3	3	137	4	141	6.62e-32	110
MS.gene53659.t1	MTR_8g105230	42.424	132	75	1	4	134	36	167	1.07e-31	111
MS.gene53659.t1	MTR_8g036075	50.350	143	62	4	4	137	49	191	1.76e-31	111
MS.gene53659.t1	MTR_7g089760	45.255	137	72	2	4	137	5	141	9.09e-31	108
MS.gene53659.t1	MTR_6g023460	40.458	131	78	0	7	137	11	141	1.43e-28	102
MS.gene53659.t1	MTR_7g087610	37.778	135	83	1	4	137	12	146	1.36e-27	100
MS.gene53659.t1	MTR_7g087610	42.188	64	37	0	76	139	12	75	4.82e-11	57.4
MS.gene53659.t1	MTR_5g088320	38.519	135	82	1	4	137	12	146	1.47e-27	100
MS.gene53659.t1	MTR_5g088320	41.176	68	40	0	72	139	8	75	3.67e-11	57.8
MS.gene53659.t1	MTR_6g025320	38.519	135	82	1	4	137	12	146	1.63e-27	99.8
MS.gene53659.t1	MTR_6g025320	42.188	64	37	0	76	139	12	75	5.24e-11	57.4
MS.gene53659.t1	MTR_1g041285	40.000	135	80	1	4	137	12	146	1.89e-27	99.8
MS.gene53659.t1	MTR_1g076650	40.602	133	78	1	6	137	14	146	3.22e-27	99.0
MS.gene53659.t1	MTR_3g089070	38.931	131	80	0	7	137	9	139	4.27e-27	98.6
MS.gene53659.t1	MTR_3g089090	38.931	131	80	0	7	137	8	138	4.58e-27	98.6
MS.gene53659.t1	MTR_5g017510	36.765	136	85	1	3	137	47	182	5.46e-26	97.1
MS.gene53659.t1	MTR_5g017560	36.765	136	85	1	3	137	47	182	5.46e-26	97.1
MS.gene53659.t1	MTR_4g086260	38.686	137	83	1	3	139	56	191	6.05e-26	97.1
MS.gene53659.t1	MTR_4g103650	38.060	134	83	0	4	137	2	135	1.76e-25	94.4
MS.gene53659.t1	MTR_5g017550	36.296	135	86	0	3	137	47	181	4.34e-25	94.7
MS.gene53659.t1	MTR_4g103655	37.313	134	84	0	4	137	6	139	2.56e-24	91.3
MS.gene53659.t1	MTR_7g074240	42.177	147	70	5	5	137	25	170	4.53e-24	91.7
MS.gene53659.t1	MTR_4g103630	37.313	134	84	0	4	137	6	139	4.64e-24	90.9
MS.gene53659.t1	MTR_7g090450	38.571	140	80	3	4	137	73	212	3.31e-23	90.5
MS.gene53659.t1	MTR_4g112460	32.857	140	91	1	3	139	10	149	2.67e-22	87.0
MS.gene53659.t1	MTR_3g083470	36.957	138	76	2	1	137	90	217	4.59e-22	87.8
MS.gene53659.t1	MTR_8g066630	30.935	139	92	1	3	137	16	154	2.12e-21	84.7
MS.gene53659.t1	MTR_2g098890	40.000	140	79	2	3	137	63	202	2.76e-21	85.5
MS.gene53659.t1	MTR_0168s0120	37.273	110	68	1	29	137	1	110	7.92e-21	81.6
MS.gene53659.t1	MTR_6g025320	37.273	110	68	1	29	137	1	110	7.92e-21	81.6
MS.gene53659.t1	MTR_1g071150	36.567	134	85	0	4	137	12	145	1.58e-20	82.0
MS.gene53659.t1	MTR_4g115170	37.662	154	77	3	3	137	63	216	9.22e-20	81.6
MS.gene53659.t1	MTR_8g069915	28.777	139	96	1	4	139	12	150	2.09e-19	79.7
MS.gene53659.t1	MTR_8g078270	32.593	135	90	1	5	138	54	188	1.30e-18	77.8
MS.gene53659.t1	MTR_7g115040	36.154	130	82	1	9	137	17	146	1.70e-18	76.6
MS.gene53659.t1	MTR_5g092810	36.765	136	79	2	5	137	398	529	2.25e-18	80.5
MS.gene53659.t1	MTR_5g009830	34.783	138	83	2	5	139	372	505	5.31e-18	79.3
MS.gene53659.t1	MTR_8g099095	34.058	138	84	2	5	139	372	505	9.32e-18	78.6
MS.gene53659.t1	MTR_1g026190	33.333	138	85	2	5	139	388	521	1.84e-17	77.8
MS.gene53659.t1	MTR_4g132070	33.824	136	83	2	5	137	397	528	1.84e-17	77.8
MS.gene53659.t1	MTR_3g051770	32.886	149	83	3	2	137	383	527	1.98e-16	75.1
MS.gene53659.t1	MTR_5g011850	32.168	143	90	4	2	139	7	147	7.18e-16	69.7
MS.gene53659.t1	MTR_5g089320	30.435	138	89	2	5	139	374	507	8.56e-16	73.2
MS.gene53659.t1	MTR_5g027000	33.071	127	84	1	9	134	27	153	9.49e-16	69.7
MS.gene53659.t1	MTR_6g007613	32.609	138	90	2	4	139	29	165	1.27e-15	69.7
MS.gene53659.t1	MTR_0028s0170	29.710	138	90	2	5	139	384	517	2.88e-15	71.6
MS.gene53659.t1	MTR_7g074020	31.618	136	90	2	4	137	30	164	4.10e-15	68.6
MS.gene53659.t1	MTR_7g091890	34.884	129	84	0	9	137	368	496	4.86e-15	70.9
MS.gene53659.t1	MTR_5g079470	57.895	57	23	1	7	63	13	68	6.88e-14	63.2
MS.gene53659.t1	MTR_4g107490	31.579	133	91	0	5	137	379	511	8.32e-14	67.4
MS.gene53659.t1	MTR_1g046960	57.627	59	23	1	28	84	1	59	8.40e-14	63.5
MS.gene53659.t1	MTR_7g068710	33.094	139	85	3	3	137	360	494	1.25e-13	67.0
MS.gene53659.t1	MTR_3g055570	29.630	135	81	1	4	138	52	172	2.48e-13	63.9
MS.gene53659.t1	MTR_1g030440	30.822	146	84	2	3	137	21	160	2.90e-13	63.5
MS.gene53659.t1	MTR_4g132040	30.147	136	88	2	5	137	401	532	1.45e-12	63.9
MS.gene53659.t1	MTR_1g052530	34.109	129	85	0	9	137	362	490	1.64e-12	63.5
MS.gene53659.t1	MTR_3g088655	30.719	153	79	5	5	137	9	154	2.68e-12	60.8
MS.gene53659.t1	MTR_7g074020	29.268	123	84	2	4	124	30	151	1.45e-11	58.9
MS.gene53659.t1	MTR_5g022030	28.676	136	84	3	9	137	411	540	1.94e-11	60.5
MS.gene53659.t1	MTR_6g007613	30.081	123	83	2	4	124	29	150	2.13e-11	58.5
MS.gene53659.t1	MTR_1g096490	29.197	137	91	2	5	139	336	468	3.96e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53659.t1	AT1G18210	50.735	136	64	2	3	138	22	154	2.22e-41	135
MS.gene53659.t1	AT1G18210	50.735	136	64	2	3	138	22	154	2.22e-41	135
MS.gene53659.t1	AT1G73630	48.905	137	67	2	2	138	18	151	1.15e-39	131
MS.gene53659.t1	AT1G66400	44.928	138	73	1	3	137	14	151	5.14e-38	127
MS.gene53659.t1	AT5G37770	46.099	141	71	1	3	138	16	156	7.50e-38	126
MS.gene53659.t1	AT5G37770	46.099	141	71	1	3	138	16	156	7.50e-38	126
MS.gene53659.t1	AT1G24620	44.118	136	75	1	4	138	37	172	3.31e-33	115
MS.gene53659.t1	AT5G17470	43.796	137	74	1	5	138	3	139	5.72e-33	113
MS.gene53659.t1	AT2G15680	42.647	136	77	1	3	138	49	183	3.46e-32	112
MS.gene53659.t1	AT3G07490	46.715	137	70	2	4	137	5	141	3.27e-31	109
MS.gene53659.t1	AT2G36180	45.522	134	69	1	8	137	4	137	3.00e-30	106
MS.gene53659.t1	AT1G05990	44.203	138	73	2	4	137	5	142	1.66e-29	105
MS.gene53659.t1	AT5G37780	39.259	135	81	1	4	137	12	146	2.89e-28	101
MS.gene53659.t1	AT1G66410	39.259	135	81	1	4	137	12	146	2.89e-28	101
MS.gene53659.t1	AT4G03290	40.141	142	79	2	4	139	5	146	4.89e-28	101
MS.gene53659.t1	AT3G59440	42.754	138	73	3	4	137	51	186	6.51e-28	102
MS.gene53659.t1	AT5G21274	39.259	135	81	1	4	137	12	146	7.11e-28	100
MS.gene53659.t1	AT5G21274	42.188	64	37	0	76	139	12	75	5.67e-11	57.0
MS.gene53659.t1	AT3G43810	38.519	135	82	1	4	137	12	146	1.71e-27	99.8
MS.gene53659.t1	AT3G43810	42.188	64	37	0	76	139	12	75	5.49e-11	57.4
MS.gene53659.t1	AT3G56800	38.519	135	82	1	4	137	12	146	1.83e-27	99.8
MS.gene53659.t1	AT3G56800	42.188	64	37	0	76	139	12	75	5.26e-11	57.4
MS.gene53659.t1	AT2G27030	38.519	135	82	1	4	137	12	146	1.83e-27	99.8
MS.gene53659.t1	AT2G27030	42.188	64	37	0	76	139	12	75	5.26e-11	57.4
MS.gene53659.t1	AT2G41110	38.519	135	82	1	4	137	12	146	1.83e-27	99.8
MS.gene53659.t1	AT2G41110	42.188	64	37	0	76	139	12	75	5.26e-11	57.4
MS.gene53659.t1	AT2G43290	40.141	142	77	2	4	137	65	206	2.00e-27	101
MS.gene53659.t1	AT3G10190	41.912	136	77	2	4	137	70	205	3.57e-27	100
MS.gene53659.t1	AT2G27030	38.519	135	82	1	4	137	12	146	3.85e-27	99.8
MS.gene53659.t1	AT3G43810	38.519	135	82	1	4	137	12	146	8.96e-27	99.8
MS.gene53659.t1	AT3G22930	38.519	135	82	1	4	137	35	169	1.57e-25	95.5
MS.gene53659.t1	AT4G12860	41.606	137	77	2	4	137	5	141	2.51e-25	94.4
MS.gene53659.t1	AT3G03400	37.209	129	78	1	5	130	6	134	7.20e-25	92.8
MS.gene53659.t1	AT4G14640	37.778	135	83	1	4	137	13	147	2.34e-24	92.0
MS.gene53659.t1	AT2G41110	35.374	147	82	2	4	137	12	158	4.31e-24	91.7
MS.gene53659.t1	AT5G37780	35.333	150	81	2	4	137	12	161	4.41e-24	91.7
MS.gene53659.t1	AT4G37010	37.681	138	83	2	4	139	27	163	8.05e-24	90.9
MS.gene53659.t1	AT4G37010	37.681	138	83	2	4	139	31	167	1.08e-23	90.9
MS.gene53659.t1	AT5G37780	38.017	121	74	1	18	137	13	133	6.01e-23	87.8
MS.gene53659.t1	AT1G66410	38.017	121	74	1	18	137	36	156	9.78e-23	87.8
MS.gene53659.t1	AT3G50770	34.965	143	85	3	3	138	63	204	1.22e-22	89.0
MS.gene53659.t1	AT5G37780	38.017	121	74	1	18	137	52	172	1.42e-22	87.8
MS.gene53659.t1	AT1G18530	31.724	145	93	2	1	139	1	145	4.74e-22	86.3
MS.gene53659.t1	AT1G32250	32.639	144	86	2	3	137	15	156	8.97e-22	85.5
MS.gene53659.t1	AT1G66410	38.182	110	67	1	29	137	1	110	1.58e-21	83.6
MS.gene53659.t1	AT1G66410	38.182	110	67	1	29	137	1	110	1.58e-21	83.6
MS.gene53659.t1	AT3G50360	35.507	138	86	2	4	139	27	163	1.96e-21	84.7
MS.gene53659.t1	AT3G50360	38.028	71	44	0	68	138	19	89	2.40e-11	58.5
MS.gene53659.t1	AT1G76650	35.075	134	87	0	4	137	43	176	2.98e-21	84.7
MS.gene53659.t1	AT1G76650	35.075	134	87	0	4	137	43	176	2.98e-21	84.7
MS.gene53659.t1	AT2G41100	33.987	153	84	1	4	139	12	164	3.20e-21	87.4
MS.gene53659.t1	AT2G41100	32.667	150	79	2	4	133	101	248	1.04e-18	80.5
MS.gene53659.t1	AT2G41100	33.987	153	84	1	4	139	12	164	3.20e-21	87.4
MS.gene53659.t1	AT2G41100	32.667	150	79	2	4	133	101	248	1.04e-18	80.5
MS.gene53659.t1	AT3G43810	37.273	110	68	1	29	137	1	110	8.30e-21	81.6
MS.gene53659.t1	AT3G43810	37.273	110	68	1	29	137	1	110	8.30e-21	81.6
MS.gene53659.t1	AT2G41410	36.232	138	84	3	4	137	70	207	1.90e-20	83.6
MS.gene53659.t1	AT2G41090	35.075	134	85	1	4	137	12	143	2.34e-20	82.8
MS.gene53659.t1	AT4G14640	36.364	121	76	1	18	137	9	129	7.19e-20	79.7
MS.gene53659.t1	AT4G20780	33.766	154	81	3	5	137	30	183	1.39e-19	80.5
MS.gene53659.t1	AT4G23650	34.058	138	84	2	5	139	384	517	5.84e-19	82.0
MS.gene53659.t1	AT2G41100	32.667	150	79	2	4	133	66	213	6.69e-19	80.5
MS.gene53659.t1	AT2G41100	30.233	129	73	1	28	139	1	129	3.25e-13	65.1
MS.gene53659.t1	AT2G41100	32.667	150	79	2	4	133	66	213	6.69e-19	80.5
MS.gene53659.t1	AT2G41100	30.233	129	73	1	28	139	1	129	3.25e-13	65.1
MS.gene53659.t1	AT2G41100	32.667	150	79	2	4	133	66	213	6.69e-19	80.5
MS.gene53659.t1	AT2G41100	30.233	129	73	1	28	139	1	129	3.25e-13	65.1
MS.gene53659.t1	AT5G42380	33.577	137	89	1	3	137	48	184	8.90e-19	78.6
MS.gene53659.t1	AT3G25600	30.216	139	94	1	4	139	12	150	1.00e-18	77.8
MS.gene53659.t1	AT4G04695	33.824	136	83	2	5	137	337	468	1.30e-18	81.3
MS.gene53659.t1	AT1G76650	35.075	134	77	2	4	137	43	166	1.53e-18	77.4
MS.gene53659.t1	AT4G04700	35.338	133	85	1	5	137	337	468	2.76e-18	80.1
MS.gene53659.t1	AT3G51920	31.429	140	92	2	2	137	7	146	1.12e-17	74.7
MS.gene53659.t1	AT1G61950	34.559	136	82	2	5	137	405	536	1.32e-17	78.2
MS.gene53659.t1	AT3G20410	36.029	136	80	2	5	137	397	528	2.17e-17	77.8
MS.gene53659.t1	AT3G20410	36.029	136	80	2	5	137	397	528	2.17e-17	77.8
MS.gene53659.t1	AT3G01830	34.058	138	86	4	3	137	10	145	4.14e-17	73.2
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT4G04740	34.559	136	82	2	5	137	374	505	4.19e-17	77.0
MS.gene53659.t1	AT1G76040	34.783	138	83	2	5	139	179	312	6.05e-17	75.9
MS.gene53659.t1	AT1G76040	34.783	138	83	2	5	139	179	312	6.05e-17	75.9
MS.gene53659.t1	AT1G50700	34.559	136	82	2	5	137	379	510	9.28e-17	75.9
MS.gene53659.t1	AT4G21940	34.559	136	82	2	5	137	407	538	1.23e-16	75.5
MS.gene53659.t1	AT4G21940	34.559	136	82	2	5	137	407	538	1.31e-16	75.5
MS.gene53659.t1	AT1G76040	34.783	138	83	2	5	139	417	550	1.43e-16	75.5
MS.gene53659.t1	AT1G76640	34.328	134	83	2	8	137	26	158	1.81e-16	71.6
MS.gene53659.t1	AT4G04720	33.824	136	83	2	5	137	385	516	2.04e-16	75.1
MS.gene53659.t1	AT4G04720	33.824	136	83	2	5	137	385	516	2.04e-16	75.1
MS.gene53659.t1	AT3G03410	30.827	133	84	2	5	137	3	127	4.26e-16	70.1
MS.gene53659.t1	AT1G12310	32.867	143	89	4	2	139	8	148	4.32e-16	70.5
MS.gene53659.t1	AT5G44460	33.784	148	81	3	5	137	29	174	4.81e-16	71.2
MS.gene53659.t1	AT1G62820	32.117	137	89	3	5	139	14	148	5.70e-16	70.1
MS.gene53659.t1	AT1G74740	36.957	138	77	2	5	137	365	497	6.75e-16	73.6
MS.gene53659.t1	AT3G51850	32.593	135	91	0	3	137	358	492	6.72e-15	70.5
MS.gene53659.t1	AT5G17480	60.714	56	21	1	8	63	13	67	8.23e-15	65.5
MS.gene53659.t1	AT3G03000	32.143	140	85	2	4	137	20	155	1.42e-14	67.0
MS.gene53659.t1	AT5G19360	30.435	138	89	2	5	139	374	507	1.53e-14	69.7
MS.gene53659.t1	AT3G22930	36.458	96	60	1	4	98	35	130	2.10e-14	65.9
MS.gene53659.t1	AT2G41860	33.835	133	88	0	5	137	360	492	2.90e-14	68.9
MS.gene53659.t1	AT4G04710	32.353	136	85	2	5	137	324	455	2.99e-14	68.6
MS.gene53659.t1	AT2G41860	33.835	133	88	0	5	137	360	492	3.07e-14	68.6
MS.gene53659.t1	AT4G04710	32.353	136	85	2	5	137	338	469	3.35e-14	68.6
MS.gene53659.t1	AT4G04710	32.353	136	85	2	5	137	351	482	3.51e-14	68.6
MS.gene53659.t1	AT1G21550	34.667	150	77	4	3	137	9	152	7.78e-14	64.7
MS.gene53659.t1	AT3G10660	29.927	137	90	2	5	139	492	624	8.50e-14	67.4
MS.gene53659.t1	AT3G10660	29.927	137	90	2	5	139	492	624	8.50e-14	67.4
MS.gene53659.t1	AT5G12180	29.710	138	90	2	5	139	379	512	1.09e-13	67.0
MS.gene53659.t1	AT5G04870	29.927	137	90	2	5	139	456	588	1.64e-13	66.6
MS.gene53659.t1	AT3G03430	47.761	67	34	1	8	74	13	78	3.50e-13	61.2
MS.gene53659.t1	AT4G04710	31.884	138	85	3	5	137	351	484	5.47e-13	65.1
MS.gene53659.t1	AT1G18890	32.331	133	90	0	5	137	369	501	1.17e-12	64.3
MS.gene53659.t1	AT5G12480	32.090	134	90	1	5	137	365	498	1.49e-12	63.9
MS.gene53659.t1	AT5G66210	32.867	143	79	5	4	137	369	503	1.51e-12	63.9
MS.gene53659.t1	AT5G66210	32.867	143	79	5	4	137	369	503	1.51e-12	63.9
MS.gene53659.t1	AT5G12480	32.090	134	90	1	5	137	271	404	1.60e-12	63.9
MS.gene53659.t1	AT5G19450	32.836	134	89	1	5	137	363	496	1.89e-12	63.5
MS.gene53659.t1	AT5G19450	32.836	134	89	1	5	137	363	496	1.89e-12	63.5
MS.gene53659.t1	AT4G14640	33.333	96	63	1	4	98	13	108	2.38e-12	60.1
MS.gene53659.t1	AT1G50700	29.012	162	82	3	5	137	379	536	2.79e-12	63.2
MS.gene53659.t1	AT3G57530	33.577	137	82	2	5	137	369	500	5.02e-12	62.4
MS.gene53659.t1	AT2G17890	30.769	143	82	5	4	137	415	549	7.76e-12	62.0
MS.gene53659.t1	AT3G51850	34.737	95	62	0	3	97	358	452	2.45e-11	60.5
MS.gene53659.t1	AT4G36070	28.873	142	88	4	3	137	377	512	5.83e-11	59.3
MS.gene53659.t1	AT4G36070	28.873	142	88	4	3	137	377	512	5.88e-11	59.3

Find 25 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAACTATGTGCAATTCTTT+CGG	0.363167	1.1:+29933187	None:intergenic
AAAGATATCGGTCTCCGAAC+TGG	0.430282	1.1:-29933413	MS.gene53659:CDS
TGAAAGCATTTCTTCCAGTT+CGG	0.472148	1.1:+29933399	None:intergenic
GAAGAAATGCTTTCAACACT+TGG	0.483615	1.1:-29933391	MS.gene53659:CDS
TTTATTACTTCATCAAATGT+TGG	0.486517	1.1:+29933361	None:intergenic
AAACGGTGATGGAAAGATAT+CGG	0.514564	1.1:-29933425	MS.gene53659:CDS
TGATGAAGTAATAAAGATGA+TGG	0.523203	1.1:-29933353	MS.gene53659:CDS
CGTCCTTGTCGACGTCGTAA+AGG	0.532322	1.1:+29933221	None:intergenic
AGAAGATGATGGCTCGCTGA+TGG	0.550707	1.1:-29933066	None:intergenic
CGAGGAGTTCAAGAAGATGA+TGG	0.561757	1.1:-29933077	MS.gene53659:CDS
GATATTGATCAGAACGGCGA+CGG	0.563636	1.1:-29933328	MS.gene53659:CDS
CGACCTTTACGACGTCGACA+AGG	0.572934	1.1:-29933224	MS.gene53659:CDS
TTTGCCGATGTCTACTGCAC+CGG	0.581636	1.1:-29933286	MS.gene53659:CDS
GTTGCGCACCTCGTCATCCA+TGG	0.582107	1.1:+29933468	None:intergenic
ACGTTGATGCTGATGGTGAC+GGG	0.590220	1.1:-29933111	MS.gene53659:CDS
GACGTTGATGCTGATGGTGA+CGG	0.609410	1.1:-29933112	MS.gene53659:CDS
TGACGGGAAAGTCAACTTCG+AGG	0.611813	1.1:-29933095	MS.gene53659:CDS
ATTGTTGAGAAATACTCCCT+CGG	0.616532	1.1:-29933157	MS.gene53659:CDS
CATTCTCTCACAGTCACCGA+GGG	0.627783	1.1:+29933141	None:intergenic
ATGGAAGATATTGATCAGAA+CGG	0.635154	1.1:-29933334	MS.gene53659:CDS
CTTTACGACGTCGACAAGGA+CGG	0.635439	1.1:-29933220	MS.gene53659:CDS
AGCACCGGTGCAGTAGACAT+CGG	0.635909	1.1:+29933282	None:intergenic
AAACTCTGCCATGGATGACG+AGG	0.643225	1.1:-29933476	None:intergenic
ATATGCGACGTTGATGCTGA+TGG	0.659619	1.1:-29933118	MS.gene53659:CDS
TCATTCTCTCACAGTCACCG+AGG	0.702111	1.1:+29933140	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTATTACTTCATCAAATGT+TGG	+	chr1.1:29933177-29933196	None:intergenic	20.0%
!	TGATGAAGTAATAAAGATGA+TGG	-	chr1.1:29933182-29933201	MS.gene53659:CDS	25.0%
	AGAACTATGTGCAATTCTTT+CGG	+	chr1.1:29933351-29933370	None:intergenic	30.0%
	ATGGAAGATATTGATCAGAA+CGG	-	chr1.1:29933201-29933220	MS.gene53659:CDS	30.0%
	TTCAACAAGTTCGACAAAAA+CGG	-	chr1.1:29933093-29933112	MS.gene53659:CDS	30.0%
	ATTGTTGAGAAATACTCCCT+CGG	-	chr1.1:29933378-29933397	MS.gene53659:CDS	35.0%
	GAAGAAATGCTTTCAACACT+TGG	-	chr1.1:29933144-29933163	MS.gene53659:CDS	35.0%
!!	AAACGGTGATGGAAAGATAT+CGG	-	chr1.1:29933110-29933129	MS.gene53659:CDS	35.0%
!!	TGAAAGCATTTCTTCCAGTT+CGG	+	chr1.1:29933139-29933158	None:intergenic	35.0%
	AAGTTCGACAAAAACGGTGA+TGG	-	chr1.1:29933099-29933118	MS.gene53659:CDS	40.0%
	AAAGATATCGGTCTCCGAAC+TGG	-	chr1.1:29933122-29933141	MS.gene53659:CDS	45.0%
	ATATGCGACGTTGATGCTGA+TGG	-	chr1.1:29933417-29933436	MS.gene53659:CDS	45.0%
	CGAGGAGTTCAAGAAGATGA+TGG	-	chr1.1:29933458-29933477	MS.gene53659:CDS	45.0%
	GATATTGATCAGAACGGCGA+CGG	-	chr1.1:29933207-29933226	MS.gene53659:CDS	45.0%
	TGCTGCAACCGAAAAAGATG+AGG	-	chr1.1:29933272-29933291	MS.gene53659:CDS	45.0%
!	GCGAAGCTCCTCATCTTTTT+CGG	+	chr1.1:29933283-29933302	None:intergenic	45.0%
!!!	ATCTTTTTCGGTTGCAGCAC+CGG	+	chr1.1:29933271-29933290	None:intergenic	45.0%
	CATTCTCTCACAGTCACCGA+GGG	+	chr1.1:29933397-29933416	None:intergenic	50.0%
	CTTTACGACGTCGACAAGGA+CGG	-	chr1.1:29933315-29933334	MS.gene53659:CDS	50.0%
	TCATTCTCTCACAGTCACCG+AGG	+	chr1.1:29933398-29933417	None:intergenic	50.0%
	TGACGGGAAAGTCAACTTCG+AGG	-	chr1.1:29933440-29933459	MS.gene53659:CDS	50.0%
	TTTGCCGATGTCTACTGCAC+CGG	-	chr1.1:29933249-29933268	MS.gene53659:CDS	50.0%
!	ACGTTGATGCTGATGGTGAC+GGG	-	chr1.1:29933424-29933443	MS.gene53659:CDS	50.0%
!	GACGTTGATGCTGATGGTGA+CGG	-	chr1.1:29933423-29933442	MS.gene53659:CDS	50.0%
	CGACCTTTACGACGTCGACA+AGG	-	chr1.1:29933311-29933330	MS.gene53659:CDS	55.0%
	CGTCCTTGTCGACGTCGTAA+AGG	+	chr1.1:29933317-29933336	None:intergenic	55.0%
!!	AGCACCGGTGCAGTAGACAT+CGG	+	chr1.1:29933256-29933275	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	29933069	29933488	29933069	ID=MS.gene53659
chr1.1	mRNA	29933069	29933488	29933069	ID=MS.gene53659.t1;Parent=MS.gene53659
chr1.1	exon	29933069	29933488	29933069	ID=MS.gene53659.t1.exon1;Parent=MS.gene53659.t1
chr1.1	CDS	29933069	29933488	29933069	ID=cds.MS.gene53659.t1;Parent=MS.gene53659.t1

Gene Sequence

>MS.gene53659

ATGGATGACGAGGTGCGCAACATCTTCAACAAGTTCGACAAAAACGGTGATGGAAAGATATCGGTCTCCGAACTGGAAGAAATGCTTTCAACACTTGGAAGCAAACCAACATTTGATGAAGTAATAAAGATGATGGAAGATATTGATCAGAACGGCGACGGTTATGTTGATCTTAAAGAATTTGCCGATGTCTACTGCACCGGTGCTGCAACCGAAAAAGATGAGGAGCTTCGCGATGCTTTCGACCTTTACGACGTCGACAAGGACGGTCTCATCTCTCCGAAAGAATTGCACATAGTTCTTAATAAAATTGTTGAGAAATACTCCCTCGGTGACTGTGAGAGAATGATATGCGACGTTGATGCTGATGGTGACGGGAAAGTCAACTTCGAGGAGTTCAAGAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene53659.t1

MDDEVRNIFNKFDKNGDGKISVSELEEMLSTLGSKPTFDEVIKMMEDIDQNGDGYVDLKEFADVYCTGAATEKDEELRDAFDLYDVDKDGLISPKELHIVLNKIVEKYSLGDCERMICDVDADGDGKVNFEEFKKMMAR