AlfalfaGEDB | MS.gene065998

M. sativa cultivar XinJiangDaYe / MS.gene065998

KEGG: K02977
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00240.26 PF01599.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065998.t1	XP_003629895.2	100	155	0	0	1	155	1	155	1.60E-65	258.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065998.t1	P62980	97.4	153	4	0	1	153	1	153	1.7e-65	250.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065998.t1	B7FGN8	100.0	155	0	0	1	155	1	155	1.1e-65	258.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050290	MS.gene065998	0.824093	9.73E-54	-1.69E-46
MS.gene050916	MS.gene065998	0.815371	9.57E-52	-1.69E-46
MS.gene051330	MS.gene065998	0.830837	2.34E-55	-1.69E-46
MS.gene051746	MS.gene065998	0.838942	2.13E-57	-1.69E-46
MS.gene051748	MS.gene065998	0.824705	6.98E-54	-1.69E-46
MS.gene051903	MS.gene065998	0.836055	1.17E-56	-1.69E-46
MS.gene052947	MS.gene065998	0.857404	1.67E-62	-1.69E-46
MS.gene053952	MS.gene065998	0.810978	8.81E-51	-1.69E-46
MS.gene054937	MS.gene065998	0.824852	6.45E-54	-1.69E-46
MS.gene055808	MS.gene065998	0.802548	5.32E-49	-1.69E-46
MS.gene056075	MS.gene065998	0.835779	1.38E-56	-1.69E-46
MS.gene056631	MS.gene065998	0.835193	1.93E-56	-1.69E-46
MS.gene057094	MS.gene065998	0.828293	9.74E-55	-1.69E-46
MS.gene058354	MS.gene065998	0.821002	5.09E-53	-1.69E-46
MS.gene06001	MS.gene065998	0.879131	1.60E-69	-1.69E-46
MS.gene060429	MS.gene065998	0.820311	7.34E-53	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene065998	MS.gene023648	PPI
MS.gene036602	MS.gene065998	PPI
MS.gene27879	MS.gene065998	PPI
MS.gene065998	MS.gene64316	PPI
MS.gene64313	MS.gene065998	PPI
MS.gene04915	MS.gene065998	PPI
MS.gene64327	MS.gene065998	PPI
MS.gene000738	MS.gene065998	PPI
MS.gene065998	MS.gene64317	PPI
MS.gene64307	MS.gene065998	PPI
MS.gene04917	MS.gene065998	PPI
MS.gene065998	MS.gene64310	PPI
MS.gene008225	MS.gene065998	PPI
MS.gene64324	MS.gene065998	PPI
MS.gene065998	MS.gene21696	PPI
MS.gene024717	MS.gene065998	PPI
MS.gene065998	MS.gene53465	PPI
MS.gene065998	MS.gene96922	PPI
MS.gene065998	MS.gene64314	PPI
MS.gene065998	MS.gene53650	PPI
MS.gene21932	MS.gene065998	PPI
MS.gene027655	MS.gene065998	PPI
MS.gene53662	MS.gene065998	PPI
MS.gene065998	MS.gene21931	PPI
MS.gene065998	MS.gene001381	PPI
MS.gene44354	MS.gene065998	PPI
MS.gene065998	MS.gene53659	PPI
MS.gene065998	MS.gene44354	PPI
MS.gene065998	MS.gene036602	PPI
MS.gene065998	MS.gene061768	PPI
MS.gene065998	MS.gene89216	PPI
MS.gene065998	MS.gene64308	PPI
MS.gene065998	MS.gene017446	PPI
MS.gene065998	MS.gene80714	PPI
MS.gene065998	MS.gene96914	PPI
MS.gene065998	MS.gene96913	PPI
MS.gene065998	MS.gene53648	PPI
MS.gene63281	MS.gene065998	PPI
MS.gene68345	MS.gene065998	PPI
MS.gene065998	MS.gene29459	PPI
MS.gene62258	MS.gene065998	PPI
MS.gene000724	MS.gene065998	PPI
MS.gene64311	MS.gene065998	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065998.t1	MTR_8g088060	100.000	155	0	0	1	155	1	155	5.57e-114	319
MS.gene065998.t1	MTR_5g033960	99.355	155	1	0	1	155	1	155	2.15e-113	318
MS.gene065998.t1	MTR_7g105080	100.000	76	0	0	1	76	1	76	1.75e-49	155
MS.gene065998.t1	MTR_3g092130	100.000	76	0	0	1	76	1	76	1.75e-49	155
MS.gene065998.t1	MTR_1g059690	100.000	76	0	0	1	76	1	76	1.75e-49	155
MS.gene065998.t1	MTR_3g092130	100.000	76	0	0	1	76	1	76	2.36e-49	155
MS.gene065998.t1	MTR_5g092700	98.701	77	1	0	1	77	1	77	2.55e-49	155
MS.gene065998.t1	MTR_5g092700	62.162	74	28	0	3	76	79	152	5.14e-26	96.7
MS.gene065998.t1	MTR_4g073580	98.701	77	1	0	1	77	1	77	2.55e-49	155
MS.gene065998.t1	MTR_4g073580	62.162	74	28	0	3	76	79	152	5.14e-26	96.7
MS.gene065998.t1	MTR_4g073580	98.701	77	1	0	1	77	1	77	1.02e-48	155
MS.gene065998.t1	MTR_4g073580	44.231	104	28	1	3	76	79	182	1.73e-19	80.9
MS.gene065998.t1	MTR_7g116360	97.436	78	2	0	1	78	1	78	1.63e-48	156
MS.gene065998.t1	MTR_7g116360	97.436	78	2	0	1	78	77	154	1.63e-48	156
MS.gene065998.t1	MTR_7g116360	100.000	76	0	0	1	76	153	228	1.92e-48	156
MS.gene065998.t1	MTR_4g088485	97.436	78	2	0	1	78	1	78	1.81e-48	155
MS.gene065998.t1	MTR_4g088485	100.000	76	0	0	1	76	138	213	2.20e-48	155
MS.gene065998.t1	MTR_4g088485	78.205	78	2	1	1	78	77	139	1.49e-33	117
MS.gene065998.t1	MTR_1g066390	98.701	77	1	0	1	77	153	229	2.25e-48	156
MS.gene065998.t1	MTR_1g066390	97.436	78	2	0	1	78	1	78	2.40e-48	156
MS.gene065998.t1	MTR_1g066390	97.436	78	2	0	1	78	77	154	2.40e-48	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	4.67e-48	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	4.67e-48	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	4.67e-48	156
MS.gene065998.t1	MTR_4g080920	96.154	78	3	0	1	78	77	154	5.84e-48	155
MS.gene065998.t1	MTR_4g080920	96.154	78	3	0	1	78	1	78	8.54e-48	154
MS.gene065998.t1	MTR_4g080920	68.831	77	24	0	1	77	153	229	2.07e-29	107
MS.gene065998.t1	MTR_6g061930	97.436	78	2	0	1	78	1	78	1.12e-47	156
MS.gene065998.t1	MTR_6g061930	97.436	78	2	0	1	78	77	154	1.12e-47	156
MS.gene065998.t1	MTR_6g061930	100.000	76	0	0	1	76	214	289	1.36e-47	155
MS.gene065998.t1	MTR_6g061930	75.641	78	4	1	1	78	153	215	6.04e-31	113
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	1.35e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	1.35e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	1.35e-47	156
MS.gene065998.t1	MTR_4g081010	100.000	76	0	0	1	76	229	304	1.59e-47	156
MS.gene065998.t1	MTR_7g116360	97.436	78	2	0	1	78	49	126	1.49e-47	155
MS.gene065998.t1	MTR_7g116360	97.436	78	2	0	1	78	125	202	1.49e-47	155
MS.gene065998.t1	MTR_7g116360	100.000	76	0	0	1	76	201	276	1.75e-47	155
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	1.63e-47	155
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	1.63e-47	155
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	1.63e-47	155
MS.gene065998.t1	MTR_8g081020	97.436	78	2	0	1	78	1	78	7.05e-47	156
MS.gene065998.t1	MTR_8g081020	97.436	78	2	0	1	78	77	154	7.05e-47	156
MS.gene065998.t1	MTR_8g081020	97.436	78	2	0	1	78	153	230	7.05e-47	156
MS.gene065998.t1	MTR_8g081020	97.436	78	2	0	1	78	229	306	7.05e-47	156
MS.gene065998.t1	MTR_8g081020	100.000	76	0	0	1	76	305	380	8.19e-47	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	1	78	7.28e-47	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	77	154	7.28e-47	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	153	230	7.28e-47	156
MS.gene065998.t1	MTR_4g091580	100.000	76	0	0	1	76	305	380	8.54e-47	156
MS.gene065998.t1	MTR_4g091580	96.154	78	3	0	1	78	229	306	2.03e-46	155
MS.gene065998.t1	MTR_4g080797	97.436	78	2	0	1	78	1	78	7.36e-47	156
MS.gene065998.t1	MTR_4g080797	97.436	78	2	0	1	78	77	154	7.36e-47	156
MS.gene065998.t1	MTR_4g080797	97.436	78	2	0	1	78	153	230	7.36e-47	156
MS.gene065998.t1	MTR_4g080797	97.436	78	2	0	1	78	229	306	7.36e-47	156
MS.gene065998.t1	MTR_4g080797	100.000	76	0	0	1	76	305	380	8.54e-47	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	7.36e-47	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	7.36e-47	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	7.36e-47	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	7.36e-47	156
MS.gene065998.t1	MTR_8g018230	100.000	76	0	0	1	76	305	380	8.54e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	7.52e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	7.52e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	7.52e-47	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	229	306	7.52e-47	156
MS.gene065998.t1	MTR_4g081010	100.000	76	0	0	1	76	305	380	8.82e-47	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	100.000	76	0	0	1	76	381	456	3.52e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	3.04e-46	156
MS.gene065998.t1	MTR_8g018230	100.000	76	0	0	1	76	381	456	3.52e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	1	78	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	77	154	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	153	230	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	229	306	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	305	382	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	97.436	78	2	0	1	78	381	458	9.48e-46	156
MS.gene065998.t1	MTR_8g018230	100.000	76	0	0	1	76	457	532	1.10e-45	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	1	78	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	77	154	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	153	230	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	229	306	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	305	382	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	97.436	78	2	0	1	78	381	458	9.58e-46	156
MS.gene065998.t1	MTR_4g081010	100.000	76	0	0	1	76	457	532	1.11e-45	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	1	78	9.68e-46	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	77	154	9.68e-46	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	153	230	9.68e-46	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	229	306	9.68e-46	156
MS.gene065998.t1	MTR_4g091580	97.436	78	2	0	1	78	381	458	9.68e-46	156
MS.gene065998.t1	MTR_4g091580	100.000	76	0	0	1	76	457	532	1.13e-45	156
MS.gene065998.t1	MTR_4g091580	94.872	78	4	0	1	78	305	382	3.17e-44	152
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	77	154	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	153	230	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	229	306	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	305	382	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	381	458	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	457	534	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	533	610	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	609	686	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	97.436	78	2	0	1	78	685	762	7.81e-45	156
MS.gene065998.t1	MTR_4g088495	100.000	76	0	0	1	76	761	836	9.05e-45	156
MS.gene065998.t1	MTR_4g088495	96.154	78	3	0	1	78	1	78	1.48e-43	153
MS.gene065998.t1	MTR_8g479250	94.872	78	4	0	1	78	141	218	2.25e-37	130
MS.gene065998.t1	MTR_8g479250	76.389	72	6	1	1	72	217	277	1.97e-26	101
MS.gene065998.t1	MTR_8g479250	100.000	41	0	0	1	41	1	41	2.59e-20	85.1
MS.gene065998.t1	MTR_8g479250	88.889	36	4	0	43	78	107	142	3.13e-14	68.6
MS.gene065998.t1	MTR_1g046640	71.053	76	22	0	1	76	240	315	5.54e-28	105
MS.gene065998.t1	MTR_5g076810	68.831	77	23	1	1	76	194	270	1.23e-27	103
MS.gene065998.t1	MTR_5g076660	69.863	73	22	0	1	73	266	338	8.28e-27	103
MS.gene065998.t1	MTR_5g067400	68.421	76	24	0	1	76	241	316	1.71e-25	99.4
MS.gene065998.t1	MTR_5g061310	60.000	75	30	0	1	75	2	76	1.12e-24	90.9
MS.gene065998.t1	MTR_5g076370	64.384	73	26	0	1	73	267	339	8.06e-23	92.4
MS.gene065998.t1	MTR_5g076505	61.333	75	29	0	1	75	240	314	8.40e-23	92.0
MS.gene065998.t1	MTR_2g038430	61.333	75	29	0	1	75	268	342	8.61e-23	92.4
MS.gene065998.t1	MTR_5g076720	65.333	75	26	0	1	75	315	389	3.99e-22	91.3
MS.gene065998.t1	MTR_1g046650	57.895	76	32	0	1	76	171	246	4.23e-22	89.0
MS.gene065998.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	6.58e-22	89.7
MS.gene065998.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	8.09e-22	89.4
MS.gene065998.t1	MTR_1g046650	57.895	76	32	0	1	76	271	346	1.20e-21	89.4
MS.gene065998.t1	MTR_5g076740	59.211	76	30	1	1	75	86	161	2.43e-21	85.1
MS.gene065998.t1	MTR_2g038420	60.000	75	30	0	1	75	260	334	2.45e-21	88.2
MS.gene065998.t1	MTR_7g094390	58.667	75	31	0	1	75	402	476	7.31e-20	85.1
MS.gene065998.t1	MTR_5g076520	57.333	75	31	1	1	74	244	318	1.00e-18	81.3
MS.gene065998.t1	MTR_7g024290	60.526	76	29	1	1	75	241	316	2.09e-18	80.1
MS.gene065998.t1	MTR_5g061290	53.333	75	35	0	1	75	252	326	1.49e-17	77.8
MS.gene065998.t1	MTR_4g009980	55.224	67	30	0	9	75	4	70	1.63e-17	72.4
MS.gene065998.t1	MTR_5g076350	48.684	76	38	1	1	75	8	83	3.57e-15	67.0
MS.gene065998.t1	MTR_5g076780	58.333	60	25	0	15	74	4	63	8.09e-15	65.5
MS.gene065998.t1	MTR_5g076760	58.621	58	24	0	10	67	4	61	8.22e-15	65.9
MS.gene065998.t1	MTR_5g076340	50.649	77	36	2	1	75	9	85	2.21e-14	64.7
MS.gene065998.t1	MTR_4g080783	41.176	85	46	1	44	124	7	91	2.46e-12	59.7
MS.gene065998.t1	MTR_4g070200	56.140	57	21	2	45	101	17	69	8.39e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065998.t1	AT2G47110	96.129	155	6	0	1	155	1	155	1.85e-108	305
MS.gene065998.t1	AT2G47110	96.129	155	6	0	1	155	1	155	1.85e-108	305
MS.gene065998.t1	AT3G62250	96.711	152	5	0	1	152	1	152	4.31e-108	305
MS.gene065998.t1	AT1G23410	91.558	154	13	0	1	154	1	154	2.55e-91	262
MS.gene065998.t1	AT3G52590	100.000	76	0	0	1	76	1	76	1.76e-49	155
MS.gene065998.t1	AT2G36170	100.000	76	0	0	1	76	1	76	1.76e-49	155
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	1	78	2.14e-49	156
MS.gene065998.t1	AT4G05050	100.000	76	0	0	1	76	77	152	2.53e-49	155
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	2.14e-49	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	77	152	2.53e-49	155
MS.gene065998.t1	AT2G35635	98.701	77	1	0	1	77	1	77	2.66e-49	155
MS.gene065998.t1	AT2G35635	62.162	74	28	0	3	76	79	152	1.68e-25	95.5
MS.gene065998.t1	AT1G31340	98.701	77	1	0	1	77	1	77	4.02e-49	155
MS.gene065998.t1	AT1G31340	63.514	74	27	0	3	76	79	152	1.45e-26	98.2
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	1	78	1.71e-48	156
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	77	154	1.71e-48	156
MS.gene065998.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.01e-48	156
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	1	78	1.71e-48	156
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	77	154	1.71e-48	156
MS.gene065998.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.01e-48	156
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	1	78	1.71e-48	156
MS.gene065998.t1	AT4G05050	97.436	78	2	0	1	78	77	154	1.71e-48	156
MS.gene065998.t1	AT4G05050	100.000	76	0	0	1	76	153	228	2.01e-48	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.71e-48	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.71e-48	156
MS.gene065998.t1	AT4G02890	100.000	76	0	0	1	76	153	228	2.01e-48	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.71e-48	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.71e-48	156
MS.gene065998.t1	AT4G02890	100.000	76	0	0	1	76	153	228	2.01e-48	156
MS.gene065998.t1	AT1G55060	96.154	78	3	0	1	78	77	154	6.49e-48	155
MS.gene065998.t1	AT1G55060	96.104	77	3	0	1	77	153	229	5.75e-46	150
MS.gene065998.t1	AT1G55060	84.615	78	12	0	1	78	1	78	1.13e-41	139
MS.gene065998.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.09e-48	157
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.26e-47	156
MS.gene065998.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.09e-48	157
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.26e-47	156
MS.gene065998.t1	AT5G03240	98.701	77	1	0	1	77	229	305	8.09e-48	157
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	1	78	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	77	154	1.26e-47	156
MS.gene065998.t1	AT5G03240	97.436	78	2	0	1	78	153	230	1.26e-47	156
MS.gene065998.t1	AT5G20620	98.701	77	1	0	1	77	229	305	8.09e-48	157
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	1	78	1.26e-47	156
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	77	154	1.26e-47	156
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	153	230	1.26e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	1.44e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	1.44e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	1.44e-47	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	229	304	1.70e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	1.44e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	1.44e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	1.44e-47	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	229	304	1.70e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.44e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.44e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	153	230	1.44e-47	156
MS.gene065998.t1	AT4G02890	100.000	76	0	0	1	76	229	304	1.70e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	1	78	1.44e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	77	154	1.44e-47	156
MS.gene065998.t1	AT4G02890	97.436	78	2	0	1	78	153	230	1.44e-47	156
MS.gene065998.t1	AT4G02890	100.000	76	0	0	1	76	229	304	1.70e-47	156
MS.gene065998.t1	AT1G65350	97.436	78	2	0	1	78	1	78	2.33e-47	156
MS.gene065998.t1	AT1G65350	96.154	78	3	0	1	78	152	229	3.25e-46	153
MS.gene065998.t1	AT1G65350	96.154	78	2	1	1	78	77	153	2.10e-44	148
MS.gene065998.t1	AT1G65350	79.121	91	5	1	1	77	228	318	1.05e-38	134
MS.gene065998.t1	AT5G20620	98.701	77	1	0	1	77	305	381	4.62e-47	157
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	1	78	7.15e-47	156
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	77	154	7.15e-47	156
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	153	230	7.15e-47	156
MS.gene065998.t1	AT5G20620	97.436	78	2	0	1	78	229	306	7.15e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	229	306	7.71e-47	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	305	380	8.95e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	229	306	7.71e-47	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	305	380	8.95e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	7.71e-47	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	229	306	7.71e-47	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	305	380	8.95e-47	156
MS.gene065998.t1	AT5G37640	94.872	78	4	0	1	78	79	156	2.11e-46	154
MS.gene065998.t1	AT5G37640	91.026	78	7	0	1	78	155	232	2.20e-42	143
MS.gene065998.t1	AT5G37640	92.208	77	5	1	1	76	231	307	3.41e-40	137
MS.gene065998.t1	AT5G37640	76.923	78	18	0	1	78	3	80	1.16e-33	120
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	229	306	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	305	382	3.18e-46	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	381	456	3.69e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	1	78	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	77	154	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	153	230	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	229	306	3.18e-46	156
MS.gene065998.t1	AT4G05320	97.436	78	2	0	1	78	305	382	3.18e-46	156
MS.gene065998.t1	AT4G05320	100.000	76	0	0	1	76	381	456	3.69e-46	156
MS.gene065998.t1	AT3G09790	91.026	78	7	0	1	78	79	156	1.49e-39	140
MS.gene065998.t1	AT3G09790	83.333	78	13	0	1	78	3	80	4.62e-36	131
MS.gene065998.t1	AT3G09790	79.730	74	15	0	1	74	552	625	1.29e-30	116
MS.gene065998.t1	AT3G09790	69.231	78	24	0	1	78	393	470	9.62e-28	108
MS.gene065998.t1	AT3G09790	73.684	76	18	1	1	74	319	394	9.49e-27	105
MS.gene065998.t1	AT3G09790	68.675	83	21	1	1	78	238	320	4.45e-26	103
MS.gene065998.t1	AT3G09790	67.073	82	20	2	1	75	155	236	1.20e-25	102
MS.gene065998.t1	AT3G09790	64.706	85	23	1	1	78	469	553	1.20e-24	99.4
MS.gene065998.t1	AT3G09790	91.026	78	7	0	1	78	79	156	1.49e-39	140
MS.gene065998.t1	AT3G09790	83.333	78	13	0	1	78	3	80	4.62e-36	131
MS.gene065998.t1	AT3G09790	79.730	74	15	0	1	74	552	625	1.29e-30	116
MS.gene065998.t1	AT3G09790	69.231	78	24	0	1	78	393	470	9.62e-28	108
MS.gene065998.t1	AT3G09790	73.684	76	18	1	1	74	319	394	9.49e-27	105
MS.gene065998.t1	AT3G09790	68.675	83	21	1	1	78	238	320	4.45e-26	103
MS.gene065998.t1	AT3G09790	67.073	82	20	2	1	75	155	236	1.20e-25	102
MS.gene065998.t1	AT3G09790	64.706	85	23	1	1	78	469	553	1.20e-24	99.4
MS.gene065998.t1	AT1G53930	75.342	73	18	0	1	73	86	158	1.22e-32	114
MS.gene065998.t1	AT1G53950	61.972	71	27	0	1	71	69	139	1.24e-24	92.8
MS.gene065998.t1	AT1G11980	55.263	76	34	0	1	76	1	76	6.99e-24	89.0
MS.gene065998.t1	AT1G53945	44.286	70	39	0	1	70	46	115	2.17e-12	60.8
MS.gene065998.t1	AT5G42220	38.889	72	44	0	1	72	24	95	3.85e-12	63.5
MS.gene065998.t1	AT5G42220	38.889	72	44	0	1	72	24	95	3.85e-12	63.5
MS.gene065998.t1	AT4G12570	38.667	75	45	1	1	74	95	169	7.12e-12	62.8

Find 45 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTTCCTTATCTTGGATCT+TGG	0.263002	4.3:+13058882	None:intergenic
GCCGTCTTCCAACTGCTTTC+CGG	0.265154	4.3:+13058828	None:intergenic
GGGTTATCGTCTTCCCTGTT+AGG	0.275426	4.3:+13058944	None:intergenic
TGCTTGTGCTTGATCTTCTT+AGG	0.315697	4.3:+13058703	None:intergenic
ATCTTCGTGAAAACCCTAAC+AGG	0.342406	4.3:-13058958	MS.gene065998:CDS
GAATCTAAGCTTCAGCCTTC+TGG	0.355525	4.3:+13058515	None:intergenic
GGTGAAGAGTGGATTCCTTC+TGG	0.367185	4.3:+13058782	None:intergenic
GAGGAATTCCTTCCTTATCT+TGG	0.378493	4.3:+13058875	None:intergenic
GTGCTTGATCTTCTTAGGCT+TGG	0.399157	4.3:+13058708	None:intergenic
CCAGCACCACACTCAGCATT+AGG	0.399166	4.3:+13058601	None:intergenic
AAGATGAGACGTTGCTGGTC+CGG	0.411687	4.3:+13058853	None:intergenic
CACCTTGTTCTCCGTCTTCG+TGG	0.413158	4.3:-13058763	MS.gene065998:CDS
CCTAATGCTGAGTGTGGTGC+TGG	0.421706	4.3:-13058601	MS.gene065998:CDS
GGTTATCGTCTTCCCTGTTA+GGG	0.439791	4.3:+13058945	None:intergenic
CGGCGAAGATGAGACGTTGC+TGG	0.440810	4.3:+13058848	None:intergenic
GATCTTCTTAGGCTTGGTGT+AGG	0.499446	4.3:+13058714	None:intergenic
TAAGGTTGATGATTCTGGTA+AGG	0.507107	4.3:-13058647	MS.gene065998:CDS
CAAAGCCAAGATCCAAGATA+AGG	0.518794	4.3:-13058887	MS.gene065998:CDS
CTGGTAAGGTACAGAGGTTG+AGG	0.519538	4.3:-13058633	MS.gene065998:CDS
TGTTGTAGTCGGCGAGAGTA+CGG	0.521646	4.3:+13058806	None:intergenic
TTCCTTCTGGATGTTGTAGT+CGG	0.528293	4.3:+13058795	None:intergenic
CATCTTCGCCGGAAAGCAGT+TGG	0.539606	4.3:-13058836	MS.gene065998:CDS
CACCACGAAGACGGAGAACA+AGG	0.547100	4.3:+13058761	None:intergenic
AGAAGATCAAGCACAAGCAT+AGG	0.547871	4.3:-13058699	MS.gene065998:CDS
GCCGGAAAGCAGTTGGAAGA+CGG	0.581960	4.3:-13058829	MS.gene065998:CDS
CAGCAACGTCTCATCTTCGC+CGG	0.583325	4.3:-13058847	MS.gene065998:CDS
AGATAAGGAAGGAATTCCTC+CGG	0.586247	4.3:-13058872	MS.gene065998:CDS
ACGGAGAACAAGGTGAAGAG+TGG	0.590212	4.3:+13058771	None:intergenic
TCTTAGCGCCACCACGAAGA+CGG	0.590816	4.3:+13058752	None:intergenic
TGTCGGAAGACTCAACCTCA+AGG	0.602618	4.3:+13058923	None:intergenic
TTCAGCCTTCTGGTAAACAT+AGG	0.603941	4.3:+13058525	None:intergenic
ATGAGACGTTGCTGGTCCGG+AGG	0.611034	4.3:+13058856	None:intergenic
GCCAAGATCCAAGATAAGGA+AGG	0.618519	4.3:-13058883	MS.gene065998:CDS
CTTGTTCTCCGTCTTCGTGG+TGG	0.619238	4.3:-13058760	MS.gene065998:CDS
TTTGACGTTGTCGATTGTGT+CGG	0.621280	4.3:+13058906	None:intergenic
GATCAAGCACAAGCATAGGA+AGG	0.622172	4.3:-13058695	MS.gene065998:CDS
GTCGGAAGACTCAACCTCAA+GGG	0.624869	4.3:+13058924	None:intergenic
ATGATTCTGGTAAGGTACAG+AGG	0.629566	4.3:-13058639	MS.gene065998:CDS
TAAGGTACAGAGGTTGAGGA+AGG	0.631549	4.3:-13058629	MS.gene065998:CDS
CGTCATTATTGTGGTAAGTG+TGG	0.634236	4.3:-13058553	MS.gene065998:CDS
CGCCGACTACAACATCCAGA+AGG	0.634733	4.3:-13058797	MS.gene065998:CDS
TCTTACCTATGTTTACCAGA+AGG	0.642596	4.3:-13058530	MS.gene065998:CDS
GAGTGTCCTAATGCTGAGTG+TGG	0.690300	4.3:-13058607	MS.gene065998:CDS
TCTTCGTGAAAACCCTAACA+GGG	0.705571	4.3:-13058957	MS.gene065998:CDS
AGGGAAGACGATAACCCTTG+AGG	0.708675	4.3:-13058938	MS.gene065998:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATAAGGTTGATGATTC+TGG	-	chr4.3:13058831-13058850	MS.gene065998:CDS	25.0%
!!	CATTTTGATCGTCATTATTG+TGG	-	chr4.3:13058921-13058940	MS.gene065998:CDS	30.0%
!!	TGCTGTTCTTCAGTTTTATA+AGG	-	chr4.3:13058818-13058837	MS.gene065998:CDS	30.0%
	TCTTACCTATGTTTACCAGA+AGG	-	chr4.3:13058953-13058972	MS.gene065998:CDS	35.0%
!!	TAAGGTTGATGATTCTGGTA+AGG	-	chr4.3:13058836-13058855	MS.gene065998:CDS	35.0%
	AGAAGATCAAGCACAAGCAT+AGG	-	chr4.3:13058784-13058803	MS.gene065998:CDS	40.0%
	AGATAAGGAAGGAATTCCTC+CGG	-	chr4.3:13058611-13058630	MS.gene065998:CDS	40.0%
	ATCTTCGTGAAAACCCTAAC+AGG	-	chr4.3:13058525-13058544	MS.gene065998:CDS	40.0%
	ATGATTCTGGTAAGGTACAG+AGG	-	chr4.3:13058844-13058863	MS.gene065998:CDS	40.0%
	CAAAGCCAAGATCCAAGATA+AGG	-	chr4.3:13058596-13058615	MS.gene065998:CDS	40.0%
	CGTCATTATTGTGGTAAGTG+TGG	-	chr4.3:13058930-13058949	MS.gene065998:CDS	40.0%
	GAGGAATTCCTTCCTTATCT+TGG	+	chr4.3:13058611-13058630	None:intergenic	40.0%
	TCCTTCCTTATCTTGGATCT+TGG	+	chr4.3:13058604-13058623	None:intergenic	40.0%
	TCTTCGTGAAAACCCTAACA+GGG	-	chr4.3:13058526-13058545	MS.gene065998:CDS	40.0%
	TGCTTGTGCTTGATCTTCTT+AGG	+	chr4.3:13058783-13058802	None:intergenic	40.0%
	TTCAGCCTTCTGGTAAACAT+AGG	+	chr4.3:13058961-13058980	None:intergenic	40.0%
	TTCCTTCTGGATGTTGTAGT+CGG	+	chr4.3:13058691-13058710	None:intergenic	40.0%
!	TTTGACGTTGTCGATTGTGT+CGG	+	chr4.3:13058580-13058599	None:intergenic	40.0%
	GATCAAGCACAAGCATAGGA+AGG	-	chr4.3:13058788-13058807	MS.gene065998:CDS	45.0%
	GCCAAGATCCAAGATAAGGA+AGG	-	chr4.3:13058600-13058619	MS.gene065998:CDS	45.0%
	GGTTATCGTCTTCCCTGTTA+GGG	+	chr4.3:13058541-13058560	None:intergenic	45.0%
	GTGCTTGATCTTCTTAGGCT+TGG	+	chr4.3:13058778-13058797	None:intergenic	45.0%
	TAAGGTACAGAGGTTGAGGA+AGG	-	chr4.3:13058854-13058873	MS.gene065998:CDS	45.0%
!!	GATCTTCTTAGGCTTGGTGT+AGG	+	chr4.3:13058772-13058791	None:intergenic	45.0%
!!	GTGTGGTGCTGGAACTTTTA+TGG	-	chr4.3:13058893-13058912	MS.gene065998:CDS	45.0%
	AAGATGAGACGTTGCTGGTC+CGG	+	chr4.3:13058633-13058652	None:intergenic	50.0%
	ACGGAGAACAAGGTGAAGAG+TGG	+	chr4.3:13058715-13058734	None:intergenic	50.0%
	AGGGAAGACGATAACCCTTG+AGG	-	chr4.3:13058545-13058564	MS.gene065998:CDS	50.0%
	CTGGTAAGGTACAGAGGTTG+AGG	-	chr4.3:13058850-13058869	MS.gene065998:CDS	50.0%
	GAGTGTCCTAATGCTGAGTG+TGG	-	chr4.3:13058876-13058895	MS.gene065998:CDS	50.0%
	GGGTTATCGTCTTCCCTGTT+AGG	+	chr4.3:13058542-13058561	None:intergenic	50.0%
	GTCGGAAGACTCAACCTCAA+GGG	+	chr4.3:13058562-13058581	None:intergenic	50.0%
	TGTCGGAAGACTCAACCTCA+AGG	+	chr4.3:13058563-13058582	None:intergenic	50.0%
	TGTTGTAGTCGGCGAGAGTA+CGG	+	chr4.3:13058680-13058699	None:intergenic	50.0%
!	GGTGAAGAGTGGATTCCTTC+TGG	+	chr4.3:13058704-13058723	None:intergenic	50.0%
	CACCACGAAGACGGAGAACA+AGG	+	chr4.3:13058725-13058744	None:intergenic	55.0%
	CACCTTGTTCTCCGTCTTCG+TGG	-	chr4.3:13058720-13058739	MS.gene065998:CDS	55.0%
	CAGCAACGTCTCATCTTCGC+CGG	-	chr4.3:13058636-13058655	MS.gene065998:CDS	55.0%
	CATCTTCGCCGGAAAGCAGT+TGG	-	chr4.3:13058647-13058666	MS.gene065998:CDS	55.0%
	CCAGCACCACACTCAGCATT+AGG	+	chr4.3:13058885-13058904	None:intergenic	55.0%
	CCTAATGCTGAGTGTGGTGC+TGG	-	chr4.3:13058882-13058901	MS.gene065998:CDS	55.0%
	CTTGTTCTCCGTCTTCGTGG+TGG	-	chr4.3:13058723-13058742	MS.gene065998:CDS	55.0%
	GCCGGAAAGCAGTTGGAAGA+CGG	-	chr4.3:13058654-13058673	MS.gene065998:CDS	55.0%
	GCCGTCTTCCAACTGCTTTC+CGG	+	chr4.3:13058658-13058677	None:intergenic	55.0%
	TCTTAGCGCCACCACGAAGA+CGG	+	chr4.3:13058734-13058753	None:intergenic	55.0%
!	CGCCGACTACAACATCCAGA+AGG	-	chr4.3:13058686-13058705	MS.gene065998:CDS	55.0%
	ATGAGACGTTGCTGGTCCGG+AGG	+	chr4.3:13058630-13058649	None:intergenic	60.0%
	CGGCGAAGATGAGACGTTGC+TGG	+	chr4.3:13058638-13058657	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	13058519	13058986	13058519	ID=MS.gene065998
chr4.3	mRNA	13058519	13058986	13058519	ID=MS.gene065998.t1;Parent=MS.gene065998
chr4.3	exon	13058519	13058986	13058519	ID=MS.gene065998.t1.exon1;Parent=MS.gene065998.t1
chr4.3	CDS	13058519	13058986	13058519	ID=cds.MS.gene065998.t1;Parent=MS.gene065998.t1

Gene Sequence

>MS.gene065998

ATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTTGAGGTTGAGTCTTCCGACACAATCGACAACGTCAAAGCCAAGATCCAAGATAAGGAAGGAATTCCTCCGGACCAGCAACGTCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTCGCCGACTACAACATCCAGAAGGAATCCACTCTTCACCTTGTTCTCCGTCTTCGTGGTGGCGCTAAGAAGCGTAAGAAGAAGACCTACACCAAGCCTAAGAAGATCAAGCACAAGCATAGGAAGGTGAAGCTTGCTGTTCTTCAGTTTTATAAGGTTGATGATTCTGGTAAGGTACAGAGGTTGAGGAAGGAGTGTCCTAATGCTGAGTGTGGTGCTGGAACTTTTATGGCGAATCATTTTGATCGTCATTATTGTGGTAAGTGTGGTCTTACCTATGTTTACCAGAAGGCTGAAGCTTAG

Protein sequence

>MS.gene065998.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAEA