AlfalfaGEDB | MS.gene64317

M. sativa cultivar XinJiangDaYe / MS.gene64317

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64317.t1	XP_013467196.1	60.6	142	53	1	1	139	1	142	8.10E-21	110.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64317.t1	Q9C9U8	58.4	137	54	1	2	138	18	151	7.2e-10	65.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64317.t1	A0A072VHE0	60.6	142	53	1	1	139	1	142	5.8e-21	110.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene008831	MS.gene64317	PPI
MS.gene009021	MS.gene64317	PPI
MS.gene46237	MS.gene64317	PPI
MS.gene64317	MS.gene71511	PPI
MS.gene87673	MS.gene64317	PPI
MS.gene98295	MS.gene64317	PPI
MS.gene29793	MS.gene64317	PPI
MS.gene21931	MS.gene64317	PPI
MS.gene074100	MS.gene64317	PPI
MS.gene64317	MS.gene29459	PPI
MS.gene046988	MS.gene64317	PPI
MS.gene025797	MS.gene64317	PPI
MS.gene64317	MS.gene35562	PPI
MS.gene065998	MS.gene64317	PPI
MS.gene001381	MS.gene64317	PPI
MS.gene64316	MS.gene64317	PPI
MS.gene63281	MS.gene64317	PPI
MS.gene29794	MS.gene64317	PPI
MS.gene68345	MS.gene64317	PPI
MS.gene35562	MS.gene64317	PPI
MS.gene89216	MS.gene64317	PPI
MS.gene001246	MS.gene64317	PPI
MS.gene040127	MS.gene64317	PPI
MS.gene62258	MS.gene64317	PPI
MS.gene64310	MS.gene64317	PPI
MS.gene55545	MS.gene64317	PPI
MS.gene000724	MS.gene64317	PPI
MS.gene64314	MS.gene64317	PPI
MS.gene21696	MS.gene64317	PPI
MS.gene74452	MS.gene64317	PPI
MS.gene64311	MS.gene64317	PPI
MS.gene036602	MS.gene64317	PPI
MS.gene27879	MS.gene64317	PPI
MS.gene96913	MS.gene64317	PPI
MS.gene040331	MS.gene64317	PPI
MS.gene58906	MS.gene64317	PPI
MS.gene71511	MS.gene64317	PPI
MS.gene58860	MS.gene64317	PPI
MS.gene98294	MS.gene64317	PPI
MS.gene27516	MS.gene64317	PPI
MS.gene02545	MS.gene64317	PPI
MS.gene053319	MS.gene64317	PPI
MS.gene04915	MS.gene64317	PPI
MS.gene49270	MS.gene64317	PPI
MS.gene97948	MS.gene64317	PPI
MS.gene29459	MS.gene64317	PPI
MS.gene61009	MS.gene64317	PPI
MS.gene64327	MS.gene64317	PPI
MS.gene000738	MS.gene64317	PPI
MS.gene64307	MS.gene64317	PPI
MS.gene53465	MS.gene64317	PPI
MS.gene061261	MS.gene64317	PPI
MS.gene026618	MS.gene64317	PPI
MS.gene04917	MS.gene64317	PPI
MS.gene074045	MS.gene64317	PPI
MS.gene47195	MS.gene64317	PPI
MS.gene64317	MS.gene79028	PPI
MS.gene061768	MS.gene64317	PPI
MS.gene036930	MS.gene64317	PPI
MS.gene013748	MS.gene64317	PPI
MS.gene64317	MS.gene21696	PPI
MS.gene65954	MS.gene64317	PPI
MS.gene008225	MS.gene64317	PPI
MS.gene64324	MS.gene64317	PPI
MS.gene011400	MS.gene64317	PPI
MS.gene057167	MS.gene64317	PPI
MS.gene64317	MS.gene64314	PPI
MS.gene09960	MS.gene64317	PPI
MS.gene024717	MS.gene64317	PPI
MS.gene056461	MS.gene64317	PPI
MS.gene64308	MS.gene64317	PPI
MS.gene64313	MS.gene64317	PPI
MS.gene93087	MS.gene64317	PPI
MS.gene35563	MS.gene64317	PPI
MS.gene55496	MS.gene64317	PPI
MS.gene003880	MS.gene64317	PPI
MS.gene54637	MS.gene64317	PPI
MS.gene49271	MS.gene64317	PPI
MS.gene67281	MS.gene64317	PPI
MS.gene64317	MS.gene53650	PPI
MS.gene62540	MS.gene64317	PPI
MS.gene025777	MS.gene64317	PPI
MS.gene022456	MS.gene64317	PPI
MS.gene062239	MS.gene64317	PPI
MS.gene93763	MS.gene64317	PPI
MS.gene46886	MS.gene64317	PPI
MS.gene53650	MS.gene64317	PPI
MS.gene026940	MS.gene64317	PPI
MS.gene80714	MS.gene64317	PPI
MS.gene21155	MS.gene64317	PPI
MS.gene71207	MS.gene64317	PPI
MS.gene92775	MS.gene64317	PPI
MS.gene023648	MS.gene64317	PPI
MS.gene07422	MS.gene64317	PPI
MS.gene03228	MS.gene64317	PPI
MS.gene09934	MS.gene64317	PPI
MS.gene96922	MS.gene64317	PPI
MS.gene21932	MS.gene64317	PPI
MS.gene28338	MS.gene64317	PPI
MS.gene85596	MS.gene64317	PPI
MS.gene94551	MS.gene64317	PPI
MS.gene027655	MS.gene64317	PPI
MS.gene79028	MS.gene64317	PPI
MS.gene47134	MS.gene64317	PPI
MS.gene056383	MS.gene64317	PPI
MS.gene022455	MS.gene64317	PPI
MS.gene05284	MS.gene64317	PPI
MS.gene015470	MS.gene64317	PPI
MS.gene041795	MS.gene64317	PPI
MS.gene63000	MS.gene64317	PPI
MS.gene22553	MS.gene64317	PPI
MS.gene53662	MS.gene64317	PPI
MS.gene057293	MS.gene64317	PPI
MS.gene96914	MS.gene64317	PPI
MS.gene53648	MS.gene64317	PPI
MS.gene017446	MS.gene64317	PPI
MS.gene44354	MS.gene64317	PPI
MS.gene033361	MS.gene64317	PPI
MS.gene53659	MS.gene64317	PPI
MS.gene038456	MS.gene64317	PPI
MS.gene060446	MS.gene64317	PPI
MS.gene64317	MS.gene93763	PPI
MS.gene004899	MS.gene64317	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64317.t1	MTR_1g046950	76.056	142	31	1	1	139	1	142	1.87e-72	213
MS.gene64317.t1	MTR_1g047100	75.000	140	33	1	1	138	1	140	2.37e-67	200
MS.gene64317.t1	MTR_5g079340	70.504	139	41	0	1	139	1	139	5.39e-66	197
MS.gene64317.t1	MTR_3g067610	64.964	137	45	1	3	139	4	137	1.64e-61	185
MS.gene64317.t1	MTR_5g008705	69.531	128	38	1	12	138	2	129	8.07e-55	168
MS.gene64317.t1	MTR_5g008695	68.696	115	33	1	28	139	1	115	2.56e-48	151
MS.gene64317.t1	MTR_8g107110	55.556	135	60	0	3	137	23	157	2.41e-45	145
MS.gene64317.t1	MTR_6g079570	53.623	138	61	3	3	138	25	161	1.03e-43	141
MS.gene64317.t1	MTR_1g032070	45.588	136	73	1	3	137	45	180	7.72e-37	125
MS.gene64317.t1	MTR_4g067270	46.043	139	70	3	3	137	4	141	3.01e-33	114
MS.gene64317.t1	MTR_7g075040	46.939	147	68	3	1	137	44	190	3.81e-33	115
MS.gene64317.t1	MTR_8g105230	43.182	132	74	1	4	134	36	167	7.85e-33	114
MS.gene64317.t1	MTR_8g036075	50.350	143	62	4	4	137	49	191	3.58e-32	113
MS.gene64317.t1	MTR_7g089760	45.985	137	71	2	4	137	5	141	5.51e-32	111
MS.gene64317.t1	MTR_6g023460	41.221	131	77	0	7	137	11	141	7.77e-30	105
MS.gene64317.t1	MTR_5g088320	39.259	135	81	1	4	137	12	146	6.24e-29	103
MS.gene64317.t1	MTR_5g088320	42.647	68	39	0	72	139	8	75	1.85e-12	60.8
MS.gene64317.t1	MTR_7g087610	38.519	135	82	1	4	137	12	146	6.52e-29	103
MS.gene64317.t1	MTR_7g087610	43.750	64	36	0	76	139	12	75	2.57e-12	60.5
MS.gene64317.t1	MTR_6g025320	39.259	135	81	1	4	137	12	146	6.73e-29	103
MS.gene64317.t1	MTR_6g025320	43.750	64	36	0	76	139	12	75	2.60e-12	60.5
MS.gene64317.t1	MTR_1g041285	40.741	135	79	1	4	137	12	146	7.63e-29	103
MS.gene64317.t1	MTR_1g076650	41.353	133	77	1	6	137	14	146	1.04e-28	102
MS.gene64317.t1	MTR_3g089090	39.695	131	79	0	7	137	8	138	2.19e-28	101
MS.gene64317.t1	MTR_3g089070	39.695	131	79	0	7	137	9	139	2.35e-28	101
MS.gene64317.t1	MTR_5g017510	37.500	136	84	1	3	137	47	182	2.73e-27	100
MS.gene64317.t1	MTR_5g017560	37.500	136	84	1	3	137	47	182	2.73e-27	100
MS.gene64317.t1	MTR_4g103650	38.806	134	82	0	4	137	2	135	1.18e-26	97.4
MS.gene64317.t1	MTR_5g017550	37.037	135	85	0	3	137	47	181	2.48e-26	97.8
MS.gene64317.t1	MTR_4g086260	38.686	137	83	1	3	139	56	191	6.52e-26	97.1
MS.gene64317.t1	MTR_4g103655	38.060	134	83	0	4	137	6	139	1.18e-25	94.7
MS.gene64317.t1	MTR_4g103630	38.060	134	83	0	4	137	6	139	2.39e-25	94.0
MS.gene64317.t1	MTR_7g090450	39.286	140	79	3	4	137	73	212	1.17e-24	94.4
MS.gene64317.t1	MTR_7g074240	42.177	147	70	5	5	137	25	170	2.30e-24	92.4
MS.gene64317.t1	MTR_4g112460	33.571	140	90	1	3	139	10	149	1.07e-23	90.5
MS.gene64317.t1	MTR_3g083470	37.681	138	75	2	1	137	90	217	1.72e-23	91.7
MS.gene64317.t1	MTR_2g098890	40.714	140	78	2	3	137	63	202	9.53e-23	89.4
MS.gene64317.t1	MTR_8g066630	31.655	139	91	1	3	137	16	154	9.58e-23	88.2
MS.gene64317.t1	MTR_0168s0120	38.182	110	67	1	29	137	1	110	3.00e-22	85.5
MS.gene64317.t1	MTR_6g025320	38.182	110	67	1	29	137	1	110	3.00e-22	85.5
MS.gene64317.t1	MTR_1g071150	37.313	134	84	0	4	137	12	145	4.54e-22	85.9
MS.gene64317.t1	MTR_4g115170	38.312	154	76	3	3	137	63	216	6.49e-21	84.7
MS.gene64317.t1	MTR_8g069915	29.496	139	95	1	4	139	12	150	9.24e-21	83.2
MS.gene64317.t1	MTR_7g115040	36.923	130	81	1	9	137	17	146	5.16e-20	80.5
MS.gene64317.t1	MTR_8g078270	33.333	135	89	1	5	138	54	188	7.47e-20	81.3
MS.gene64317.t1	MTR_5g092810	36.765	136	79	2	5	137	398	529	2.34e-18	80.5
MS.gene64317.t1	MTR_5g009830	34.783	138	83	2	5	139	372	505	5.26e-18	79.3
MS.gene64317.t1	MTR_8g099095	34.058	138	84	2	5	139	372	505	9.32e-18	78.6
MS.gene64317.t1	MTR_4g132070	34.559	136	82	2	5	137	397	528	1.30e-17	78.2
MS.gene64317.t1	MTR_1g026190	33.333	138	85	2	5	139	388	521	1.89e-17	77.8
MS.gene64317.t1	MTR_5g011850	32.867	143	89	4	2	139	7	147	2.63e-17	73.6
MS.gene64317.t1	MTR_6g007613	33.333	138	89	2	4	139	29	165	4.22e-17	73.6
MS.gene64317.t1	MTR_6g007613	38.806	67	41	0	72	138	25	91	8.01e-12	59.7
MS.gene64317.t1	MTR_5g027000	33.858	127	83	1	9	134	27	153	7.05e-17	72.8
MS.gene64317.t1	MTR_3g051770	33.103	145	88	2	2	137	383	527	9.65e-17	75.9
MS.gene64317.t1	MTR_7g074020	32.353	136	89	2	4	137	30	164	1.48e-16	72.4
MS.gene64317.t1	MTR_7g074020	38.806	67	41	0	72	138	26	92	8.23e-12	59.7
MS.gene64317.t1	MTR_5g089320	30.435	138	89	2	5	139	374	507	7.77e-16	73.2
MS.gene64317.t1	MTR_0028s0170	30.435	138	89	2	5	139	384	517	7.81e-15	70.5
MS.gene64317.t1	MTR_1g030440	31.507	146	83	2	3	137	21	160	8.95e-15	67.4
MS.gene64317.t1	MTR_3g055570	30.370	135	80	1	4	138	52	172	1.02e-14	67.4
MS.gene64317.t1	MTR_7g091890	34.884	129	84	0	9	137	368	496	4.04e-14	68.2
MS.gene64317.t1	MTR_7g068710	31.852	135	92	0	3	137	360	494	4.99e-14	68.2
MS.gene64317.t1	MTR_5g079470	57.895	57	23	1	7	63	13	68	7.83e-14	62.8
MS.gene64317.t1	MTR_1g046960	57.627	59	23	1	28	84	1	59	9.56e-14	63.2
MS.gene64317.t1	MTR_4g107490	32.836	134	88	2	5	137	379	511	1.26e-13	67.0
MS.gene64317.t1	MTR_3g088655	31.373	153	78	5	5	137	9	154	5.45e-13	62.8
MS.gene64317.t1	MTR_7g074020	30.081	123	83	2	4	124	30	151	6.91e-13	62.4
MS.gene64317.t1	MTR_7g074020	38.806	67	41	0	72	138	26	92	8.12e-12	59.7
MS.gene64317.t1	MTR_6g007613	30.894	123	82	2	4	124	29	150	7.26e-13	62.4
MS.gene64317.t1	MTR_6g007613	38.806	67	41	0	72	138	25	91	6.64e-12	59.7
MS.gene64317.t1	MTR_4g132040	30.827	133	91	1	5	137	401	532	8.52e-13	64.7
MS.gene64317.t1	MTR_5g022030	29.412	136	83	4	9	137	411	540	1.10e-11	61.2
MS.gene64317.t1	MTR_8g096050	28.676	136	92	1	2	137	53	183	1.27e-11	61.2
MS.gene64317.t1	MTR_1g052530	33.333	129	86	0	9	137	362	490	1.58e-11	60.8
MS.gene64317.t1	MTR_1g096490	29.927	137	90	2	5	139	336	468	5.77e-11	59.3
MS.gene64317.t1	MTR_3g055510	28.058	139	78	3	7	139	13	135	7.27e-11	56.6
MS.gene64317.t1	MTR_4g066660	31.387	137	89	2	3	137	376	509	9.78e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64317.t1	AT1G18210	51.471	136	63	2	3	138	22	154	1.13e-42	139
MS.gene64317.t1	AT1G18210	51.471	136	63	2	3	138	22	154	1.13e-42	139
MS.gene64317.t1	AT1G73630	49.635	137	66	2	2	138	18	151	5.08e-41	134
MS.gene64317.t1	AT1G66400	45.652	138	72	1	3	137	14	151	1.98e-39	130
MS.gene64317.t1	AT5G37770	46.809	141	70	1	3	138	16	156	3.44e-39	130
MS.gene64317.t1	AT5G37770	46.809	141	70	1	3	138	16	156	3.44e-39	130
MS.gene64317.t1	AT1G24620	44.853	136	74	1	4	138	37	172	1.91e-34	118
MS.gene64317.t1	AT5G17470	44.526	137	73	1	5	138	3	139	2.54e-34	117
MS.gene64317.t1	AT2G15680	43.382	136	76	1	3	138	49	183	1.46e-33	116
MS.gene64317.t1	AT3G07490	47.445	137	69	2	4	137	5	141	1.81e-32	112
MS.gene64317.t1	AT2G36180	46.269	134	68	1	8	137	4	137	9.24e-32	110
MS.gene64317.t1	AT1G05990	44.928	138	72	2	4	137	5	142	7.91e-31	108
MS.gene64317.t1	AT5G37780	40.000	135	80	1	4	137	12	146	1.31e-29	105
MS.gene64317.t1	AT5G37780	41.176	68	40	0	72	139	8	75	7.66e-12	59.3
MS.gene64317.t1	AT1G66410	40.000	135	80	1	4	137	12	146	1.31e-29	105
MS.gene64317.t1	AT1G66410	41.176	68	40	0	72	139	8	75	7.66e-12	59.3
MS.gene64317.t1	AT4G03290	40.845	142	78	2	4	139	5	146	2.15e-29	104
MS.gene64317.t1	AT3G59440	43.478	138	72	3	4	137	51	186	2.76e-29	105
MS.gene64317.t1	AT5G21274	40.000	135	80	1	4	137	12	146	2.86e-29	104
MS.gene64317.t1	AT5G21274	43.750	64	36	0	76	139	12	75	2.90e-12	60.5
MS.gene64317.t1	AT3G43810	39.259	135	81	1	4	137	12	146	7.05e-29	103
MS.gene64317.t1	AT3G43810	43.750	64	36	0	76	139	12	75	2.72e-12	60.5
MS.gene64317.t1	AT3G56800	39.259	135	81	1	4	137	12	146	7.86e-29	103
MS.gene64317.t1	AT3G56800	43.750	64	36	0	76	139	12	75	2.61e-12	60.8
MS.gene64317.t1	AT2G27030	39.259	135	81	1	4	137	12	146	7.86e-29	103
MS.gene64317.t1	AT2G27030	43.750	64	36	0	76	139	12	75	2.61e-12	60.8
MS.gene64317.t1	AT2G41110	39.259	135	81	1	4	137	12	146	7.86e-29	103
MS.gene64317.t1	AT2G41110	43.750	64	36	0	76	139	12	75	2.61e-12	60.8
MS.gene64317.t1	AT2G43290	40.845	142	76	2	4	137	65	206	9.44e-29	104
MS.gene64317.t1	AT3G10190	42.647	136	76	2	4	137	70	205	1.21e-28	104
MS.gene64317.t1	AT2G27030	39.259	135	81	1	4	137	12	146	1.54e-28	103
MS.gene64317.t1	AT2G27030	43.750	64	36	0	76	139	12	75	6.89e-12	60.1
MS.gene64317.t1	AT3G43810	39.259	135	81	1	4	137	12	146	3.57e-28	103
MS.gene64317.t1	AT3G43810	43.750	64	36	0	76	139	12	75	1.04e-11	60.1
MS.gene64317.t1	AT3G22930	39.259	135	81	1	4	137	35	169	6.28e-27	99.0
MS.gene64317.t1	AT4G12860	43.066	137	75	2	4	137	5	141	1.26e-26	97.8
MS.gene64317.t1	AT3G03400	37.984	129	77	1	5	130	6	134	3.57e-26	96.3
MS.gene64317.t1	AT4G14640	38.519	135	82	1	4	137	13	147	8.36e-26	95.5
MS.gene64317.t1	AT2G41110	36.054	147	81	2	4	137	12	158	1.82e-25	95.1
MS.gene64317.t1	AT5G37780	36.000	150	80	2	4	137	12	161	2.19e-25	94.7
MS.gene64317.t1	AT4G37010	38.406	138	82	2	4	139	27	163	4.10e-25	94.4
MS.gene64317.t1	AT4G37010	38.406	138	82	2	4	139	31	167	4.11e-25	94.4
MS.gene64317.t1	AT5G37780	38.843	121	73	1	18	137	13	133	2.34e-24	91.3
MS.gene64317.t1	AT1G66410	38.843	121	73	1	18	137	36	156	3.57e-24	91.7
MS.gene64317.t1	AT5G37780	38.843	121	73	1	18	137	52	172	7.31e-24	91.3
MS.gene64317.t1	AT3G50770	35.664	143	84	3	3	138	63	204	8.36e-24	92.0
MS.gene64317.t1	AT1G18530	32.414	145	92	2	1	139	1	145	2.08e-23	89.7
MS.gene64317.t1	AT1G32250	33.333	144	85	2	3	137	15	156	3.83e-23	89.4
MS.gene64317.t1	AT1G66410	39.091	110	66	1	29	137	1	110	5.79e-23	87.0
MS.gene64317.t1	AT1G66410	39.091	110	66	1	29	137	1	110	5.79e-23	87.0
MS.gene64317.t1	AT3G50360	36.232	138	85	2	4	139	27	163	7.86e-23	88.6
MS.gene64317.t1	AT3G50360	39.437	71	43	0	68	138	19	89	1.20e-12	62.0
MS.gene64317.t1	AT1G76650	35.821	134	86	0	4	137	43	176	1.06e-22	88.2
MS.gene64317.t1	AT1G76650	35.821	134	86	0	4	137	43	176	1.06e-22	88.2
MS.gene64317.t1	AT2G41100	34.641	153	83	1	4	139	12	164	1.92e-22	90.5
MS.gene64317.t1	AT2G41100	33.333	150	78	2	4	133	101	248	6.03e-20	84.0
MS.gene64317.t1	AT2G41100	34.641	153	83	1	4	139	12	164	1.92e-22	90.5
MS.gene64317.t1	AT2G41100	33.333	150	78	2	4	133	101	248	6.03e-20	84.0
MS.gene64317.t1	AT3G43810	38.182	110	67	1	29	137	1	110	3.14e-22	85.5
MS.gene64317.t1	AT3G43810	38.182	110	67	1	29	137	1	110	3.14e-22	85.5
MS.gene64317.t1	AT2G41410	36.957	138	83	3	4	137	70	207	9.72e-22	86.7
MS.gene64317.t1	AT4G14640	37.190	121	75	1	18	137	9	129	1.99e-21	84.0
MS.gene64317.t1	AT4G20780	34.416	154	80	3	5	137	30	183	1.23e-20	83.2
MS.gene64317.t1	AT2G41090	35.075	134	85	1	4	137	12	143	2.13e-20	82.8
MS.gene64317.t1	AT2G41100	33.333	150	78	2	4	133	66	213	4.01e-20	84.0
MS.gene64317.t1	AT2G41100	31.008	129	72	1	28	139	1	129	1.90e-14	68.6
MS.gene64317.t1	AT2G41100	33.333	150	78	2	4	133	66	213	4.01e-20	84.0
MS.gene64317.t1	AT2G41100	31.008	129	72	1	28	139	1	129	1.90e-14	68.6
MS.gene64317.t1	AT2G41100	33.333	150	78	2	4	133	66	213	4.01e-20	84.0
MS.gene64317.t1	AT2G41100	31.008	129	72	1	28	139	1	129	1.90e-14	68.6
MS.gene64317.t1	AT3G25600	30.935	139	93	1	4	139	12	150	4.15e-20	81.3
MS.gene64317.t1	AT5G42380	34.307	137	88	1	3	137	48	184	4.35e-20	81.6
MS.gene64317.t1	AT1G76650	35.821	134	76	2	4	137	43	166	5.85e-20	80.9
MS.gene64317.t1	AT4G04700	35.338	133	85	1	5	137	337	468	2.16e-19	83.6
MS.gene64317.t1	AT4G23650	34.058	138	84	2	5	139	384	517	4.90e-19	82.4
MS.gene64317.t1	AT3G51920	32.143	140	91	2	2	137	7	146	5.30e-19	78.2
MS.gene64317.t1	AT4G04695	34.074	135	84	2	5	137	337	468	8.64e-19	81.6
MS.gene64317.t1	AT3G01830	34.783	138	85	4	3	137	10	145	1.36e-18	77.0
MS.gene64317.t1	AT1G76640	35.075	134	82	2	8	137	26	158	7.74e-18	75.5
MS.gene64317.t1	AT1G61950	34.559	136	82	2	5	137	405	536	1.54e-17	78.2
MS.gene64317.t1	AT3G03410	31.579	133	83	2	5	137	3	127	1.65e-17	73.6
MS.gene64317.t1	AT1G12310	33.566	143	88	4	2	139	8	148	1.76e-17	73.9
MS.gene64317.t1	AT3G20410	36.029	136	80	2	5	137	397	528	2.09e-17	77.8
MS.gene64317.t1	AT3G20410	36.029	136	80	2	5	137	397	528	2.09e-17	77.8
MS.gene64317.t1	AT1G62820	32.847	137	88	3	5	139	14	148	2.40e-17	73.9
MS.gene64317.t1	AT5G44460	34.459	148	80	3	5	137	29	174	3.81e-17	73.9
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT4G04740	34.559	136	82	2	5	137	374	505	5.39e-17	76.6
MS.gene64317.t1	AT1G76040	34.783	138	83	2	5	139	179	312	7.26e-17	75.5
MS.gene64317.t1	AT1G76040	34.783	138	83	2	5	139	179	312	7.26e-17	75.5
MS.gene64317.t1	AT1G50700	34.559	136	82	2	5	137	379	510	1.01e-16	75.9
MS.gene64317.t1	AT4G21940	34.559	136	82	2	5	137	407	538	1.32e-16	75.5
MS.gene64317.t1	AT4G21940	34.559	136	82	2	5	137	407	538	1.32e-16	75.5
MS.gene64317.t1	AT1G76040	34.783	138	83	2	5	139	417	550	1.40e-16	75.5
MS.gene64317.t1	AT4G04720	33.824	136	83	2	5	137	385	516	2.00e-16	75.1
MS.gene64317.t1	AT4G04720	33.824	136	83	2	5	137	385	516	2.00e-16	75.1
MS.gene64317.t1	AT3G51850	33.333	135	90	0	3	137	358	492	3.83e-16	74.3
MS.gene64317.t1	AT1G74740	38.971	136	77	3	5	137	365	497	4.08e-16	73.9
MS.gene64317.t1	AT3G03000	32.857	140	84	2	4	137	20	155	6.90e-16	70.5
MS.gene64317.t1	AT5G19360	31.852	135	91	1	5	139	374	507	1.31e-15	72.8
MS.gene64317.t1	AT1G21550	35.333	150	76	4	3	137	9	152	2.89e-15	68.6
MS.gene64317.t1	AT5G17480	60.714	56	21	1	8	63	13	67	8.97e-15	65.5
MS.gene64317.t1	AT5G12180	31.111	135	92	1	5	139	379	512	8.99e-15	70.1
MS.gene64317.t1	AT3G22930	36.458	96	60	1	4	98	35	130	2.49e-14	65.5
MS.gene64317.t1	AT4G04710	33.088	136	84	2	5	137	338	469	2.66e-14	68.9
MS.gene64317.t1	AT4G04710	33.088	136	84	2	5	137	324	455	2.77e-14	68.9
MS.gene64317.t1	AT4G04710	33.088	136	84	2	5	137	351	482	2.98e-14	68.6
MS.gene64317.t1	AT3G10660	29.927	137	90	2	5	139	492	624	1.37e-13	67.0
MS.gene64317.t1	AT3G10660	29.927	137	90	2	5	139	492	624	1.37e-13	67.0
MS.gene64317.t1	AT2G41860	33.083	133	89	0	5	137	360	492	2.36e-13	66.2
MS.gene64317.t1	AT2G41860	33.083	133	89	0	5	137	360	492	2.36e-13	66.2
MS.gene64317.t1	AT1G18890	35.294	136	82	3	5	137	369	501	2.54e-13	66.2
MS.gene64317.t1	AT5G04870	29.927	137	90	2	5	139	456	588	2.64e-13	66.2
MS.gene64317.t1	AT3G03430	47.761	67	34	1	8	74	13	78	4.11e-13	61.2
MS.gene64317.t1	AT4G04710	32.609	138	84	3	5	137	351	484	4.97e-13	65.1
MS.gene64317.t1	AT5G66210	32.624	141	82	5	4	137	369	503	9.86e-13	64.3
MS.gene64317.t1	AT5G66210	32.624	141	82	5	4	137	369	503	9.86e-13	64.3
MS.gene64317.t1	AT3G57530	33.582	134	86	2	5	137	369	500	1.70e-12	63.5
MS.gene64317.t1	AT4G14640	33.333	96	63	1	4	98	13	108	2.43e-12	60.1
MS.gene64317.t1	AT5G12480	32.090	134	90	1	5	137	365	498	2.55e-12	63.2
MS.gene64317.t1	AT2G17890	31.206	141	84	5	4	137	415	549	2.81e-12	63.2
MS.gene64317.t1	AT5G12480	32.090	134	90	1	5	137	271	404	2.89e-12	63.2
MS.gene64317.t1	AT1G50700	29.012	162	82	3	5	137	379	536	3.05e-12	63.2
MS.gene64317.t1	AT2G41100	29.688	128	68	2	31	138	3	128	5.07e-12	60.8
MS.gene64317.t1	AT4G36070	30.282	142	86	5	3	137	377	512	1.37e-11	61.2
MS.gene64317.t1	AT4G36070	30.282	142	86	5	3	137	377	512	1.38e-11	61.2
MS.gene64317.t1	AT5G19450	32.090	134	90	1	5	137	363	496	1.83e-11	60.8
MS.gene64317.t1	AT5G19450	32.090	134	90	1	5	137	363	496	1.83e-11	60.8
MS.gene64317.t1	AT3G51850	34.737	95	62	0	3	97	358	452	2.52e-11	60.5
MS.gene64317.t1	AT1G35670	30.657	137	89	2	5	139	332	464	4.93e-11	59.7
MS.gene64317.t1	AT5G23580	28.148	135	95	1	5	139	328	460	8.53e-11	58.9

Find 26 sgRNAs with CRISPR-Local

Find 28 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACATAGTTCTTAATAAAAT+TGG	0.142946	1.3:-28660090	MS.gene64317:CDS
AGAACTATGTGCAATTCTTT+CGG	0.363167	1.3:+28660102	None:intergenic
AAAGATATCGGTCTCGGAAC+TGG	0.397238	1.3:-28660328	MS.gene64317:CDS
GAAGAAATGCTTTCAACACT+TGG	0.483615	1.3:-28660306	MS.gene64317:CDS
TTTATTACTTCATCAAATGT+TGG	0.486517	1.3:+28660276	None:intergenic
AAACGGTGATGGAAAGATAT+CGG	0.514564	1.3:-28660340	MS.gene64317:CDS
TGATGAAGTAATAAAGATGA+TGG	0.523203	1.3:-28660268	MS.gene64317:CDS
CGTCCTTGTCGACGTCGTAA+AGG	0.532322	1.3:+28660136	None:intergenic
AGAAGATGATGGCTCGCTGA+TGG	0.550707	1.3:-28659981	None:intergenic
CGAGGAGTTCAAGAAGATGA+TGG	0.561757	1.3:-28659992	MS.gene64317:CDS
GATATTGATCAGAACGGCGA+CGG	0.563636	1.3:-28660243	MS.gene64317:CDS
TGATGGAAAGATATCGGTCT+CGG	0.572669	1.3:-28660334	MS.gene64317:CDS
CGACCTTTACGACGTCGACA+AGG	0.572934	1.3:-28660139	MS.gene64317:CDS
TTTGCCGATGTCTACTGCAC+CGG	0.581636	1.3:-28660201	MS.gene64317:CDS
GTTGCGCACCTCGTCATCCA+TGG	0.582107	1.3:+28660383	None:intergenic
ACGTTGATGCTGATGGTGAC+GGG	0.590220	1.3:-28660026	MS.gene64317:CDS
GACGTTGATGCTGATGGTGA+CGG	0.609410	1.3:-28660027	MS.gene64317:CDS
TGACGGGAAAGTCAACTTCG+AGG	0.611813	1.3:-28660010	MS.gene64317:CDS
ATTGGTGAGAAATACTCCCT+CGG	0.618828	1.3:-28660072	MS.gene64317:CDS
CATTCTCTCACAGTCACCGA+GGG	0.627783	1.3:+28660056	None:intergenic
ATGGAAGATATTGATCAGAA+CGG	0.635154	1.3:-28660249	MS.gene64317:CDS
CTTTACGACGTCGACAAGGA+CGG	0.635439	1.3:-28660135	MS.gene64317:CDS
AGCACCGGTGCAGTAGACAT+CGG	0.635909	1.3:+28660197	None:intergenic
AAACTCTGCCATGGATGACG+AGG	0.643225	1.3:-28660391	None:intergenic
ATATGCGACGTTGATGCTGA+TGG	0.659619	1.3:-28660033	MS.gene64317:CDS
TCATTCTCTCACAGTCACCG+AGG	0.702111	1.3:+28660055	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CACATAGTTCTTAATAAAAT+TGG	-	chr1.3:28660275-28660294	MS.gene64317:CDS	20.0%
!!	TTTATTACTTCATCAAATGT+TGG	+	chr1.3:28660092-28660111	None:intergenic	20.0%
!	TGATGAAGTAATAAAGATGA+TGG	-	chr1.3:28660097-28660116	MS.gene64317:CDS	25.0%
	AGAACTATGTGCAATTCTTT+CGG	+	chr1.3:28660266-28660285	None:intergenic	30.0%
	ATGGAAGATATTGATCAGAA+CGG	-	chr1.3:28660116-28660135	MS.gene64317:CDS	30.0%
	TTCAACAAGTTCGACAAAAA+CGG	-	chr1.3:28660008-28660027	MS.gene64317:CDS	30.0%
	GAAGAAATGCTTTCAACACT+TGG	-	chr1.3:28660059-28660078	MS.gene64317:CDS	35.0%
!!	AAACGGTGATGGAAAGATAT+CGG	-	chr1.3:28660025-28660044	MS.gene64317:CDS	35.0%
	AAGTTCGACAAAAACGGTGA+TGG	-	chr1.3:28660014-28660033	MS.gene64317:CDS	40.0%
	ATTGGTGAGAAATACTCCCT+CGG	-	chr1.3:28660293-28660312	MS.gene64317:CDS	40.0%
	TGATGGAAAGATATCGGTCT+CGG	-	chr1.3:28660031-28660050	MS.gene64317:CDS	40.0%
	AAAGATATCGGTCTCGGAAC+TGG	-	chr1.3:28660037-28660056	MS.gene64317:CDS	45.0%
	ATATGCGACGTTGATGCTGA+TGG	-	chr1.3:28660332-28660351	MS.gene64317:CDS	45.0%
	CGAGGAGTTCAAGAAGATGA+TGG	-	chr1.3:28660373-28660392	MS.gene64317:CDS	45.0%
	GATATTGATCAGAACGGCGA+CGG	-	chr1.3:28660122-28660141	MS.gene64317:CDS	45.0%
	TGCTGCAACCGAAAAAGATG+AGG	-	chr1.3:28660187-28660206	MS.gene64317:CDS	45.0%
!	GCGAAGCTCCTCATCTTTTT+CGG	+	chr1.3:28660198-28660217	None:intergenic	45.0%
!!!	ATCTTTTTCGGTTGCAGCAC+CGG	+	chr1.3:28660186-28660205	None:intergenic	45.0%
	CATTCTCTCACAGTCACCGA+GGG	+	chr1.3:28660312-28660331	None:intergenic	50.0%
	CTTTACGACGTCGACAAGGA+CGG	-	chr1.3:28660230-28660249	MS.gene64317:CDS	50.0%
	TCATTCTCTCACAGTCACCG+AGG	+	chr1.3:28660313-28660332	None:intergenic	50.0%
	TGACGGGAAAGTCAACTTCG+AGG	-	chr1.3:28660355-28660374	MS.gene64317:CDS	50.0%
	TTTGCCGATGTCTACTGCAC+CGG	-	chr1.3:28660164-28660183	MS.gene64317:CDS	50.0%
!	ACGTTGATGCTGATGGTGAC+GGG	-	chr1.3:28660339-28660358	MS.gene64317:CDS	50.0%
!	GACGTTGATGCTGATGGTGA+CGG	-	chr1.3:28660338-28660357	MS.gene64317:CDS	50.0%
	CGACCTTTACGACGTCGACA+AGG	-	chr1.3:28660226-28660245	MS.gene64317:CDS	55.0%
	CGTCCTTGTCGACGTCGTAA+AGG	+	chr1.3:28660232-28660251	None:intergenic	55.0%
!!	AGCACCGGTGCAGTAGACAT+CGG	+	chr1.3:28660171-28660190	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	28659984	28660403	28659984	ID=MS.gene64317
chr1.3	mRNA	28659984	28660403	28659984	ID=MS.gene64317.t1;Parent=MS.gene64317
chr1.3	exon	28659984	28660403	28659984	ID=MS.gene64317.t1.exon1;Parent=MS.gene64317.t1
chr1.3	CDS	28659984	28660403	28659984	ID=cds.MS.gene64317.t1;Parent=MS.gene64317.t1

Gene Sequence

>MS.gene64317

ATGGATGACGAGGTGCGCAACATCTTCAACAAGTTCGACAAAAACGGTGATGGAAAGATATCGGTCTCGGAACTGGAAGAAATGCTTTCAACACTTGGAAGCAAACCAACATTTGATGAAGTAATAAAGATGATGGAAGATATTGATCAGAACGGCGACGGTTATGTTGATCTTAAAGAATTTGCCGATGTCTACTGCACCGGTGCTGCAACCGAAAAAGATGAGGAGCTTCGCGATGCTTTCGACCTTTACGACGTCGACAAGGACGGTCTCATCTCTCCGAAAGAATTGCACATAGTTCTTAATAAAATTGGTGAGAAATACTCCCTCGGTGACTGTGAGAGAATGATATGCGACGTTGATGCTGATGGTGACGGGAAAGTCAACTTCGAGGAGTTCAAGAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene64317.t1

MDDEVRNIFNKFDKNGDGKISVSELEEMLSTLGSKPTFDEVIKMMEDIDQNGDGYVDLKEFADVYCTGAATEKDEELRDAFDLYDVDKDGLISPKELHIVLNKIGEKYSLGDCERMICDVDADGDGKVNFEEFKKMMAR