AlfalfaGEDB | MS.gene68345

M. sativa cultivar XinJiangDaYe / MS.gene68345

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68345.t1	XP_013467196.1	82.9	140	23	1	1	139	1	140	9.00E-44	186.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68345.t1	Q9LE22	49.6	135	63	1	5	139	24	153	3.5e-28	125.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68345.t1	A0A072VHE0	82.9	140	23	1	1	139	1	140	6.5e-44	186.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene68345	MS.gene21155	PPI
MS.gene68345	MS.gene53662	PPI
MS.gene68345	MS.gene63281	PPI
MS.gene68345	MS.gene060446	PPI
MS.gene68345	MS.gene013748	PPI
MS.gene68345	MS.gene97948	PPI
MS.gene68345	MS.gene21696	PPI
MS.gene68345	MS.gene64316	PPI
MS.gene68345	MS.gene29793	PPI
MS.gene68345	MS.gene98294	PPI
MS.gene68345	MS.gene05284	PPI
MS.gene68345	MS.gene22553	PPI
MS.gene68345	MS.gene53465	PPI
MS.gene68345	MS.gene074045	PPI
MS.gene038456	MS.gene68345	PPI
MS.gene68345	MS.gene03228	PPI
MS.gene68345	MS.gene000738	PPI
MS.gene68345	MS.gene04917	PPI
MS.gene68345	MS.gene46237	PPI
MS.gene68345	MS.gene056383	PPI
MS.gene68345	MS.gene64317	PPI
MS.gene68345	MS.gene46886	PPI
MS.gene68345	MS.gene025777	PPI
MS.gene68345	MS.gene040331	PPI
MS.gene68345	MS.gene022455	PPI
MS.gene68345	MS.gene038456	PPI
MS.gene68345	MS.gene63000	PPI
MS.gene68345	MS.gene93087	PPI
MS.gene68345	MS.gene64310	PPI
MS.gene68345	MS.gene046988	PPI
MS.gene58860	MS.gene68345	PPI
MS.gene68345	MS.gene057293	PPI
MS.gene68345	MS.gene74452	PPI
MS.gene68345	MS.gene09934	PPI
MS.gene68345	MS.gene54637	PPI
MS.gene68345	MS.gene58906	PPI
MS.gene68345	MS.gene79028	PPI
MS.gene68345	MS.gene004899	PPI
MS.gene68345	MS.gene49271	PPI
MS.gene68345	MS.gene003880	PPI
MS.gene68345	MS.gene053319	PPI
MS.gene68345	MS.gene008225	PPI
MS.gene68345	MS.gene000724	PPI
MS.gene68345	MS.gene65954	PPI
MS.gene62258	MS.gene68345	PPI
MS.gene68345	MS.gene98295	PPI
MS.gene68345	MS.gene022456	PPI
MS.gene68345	MS.gene001246	PPI
MS.gene68345	MS.gene62258	PPI
MS.gene68345	MS.gene041795	PPI
MS.gene68345	MS.gene85596	PPI
MS.gene68345	MS.gene96922	PPI
MS.gene68345	MS.gene64324	PPI
MS.gene68345	MS.gene55496	PPI
MS.gene68345	MS.gene025797	PPI
MS.gene68345	MS.gene21931	PPI
MS.gene68345	MS.gene27516	PPI
MS.gene68345	MS.gene64314	PPI
MS.gene68345	MS.gene040127	PPI
MS.gene68345	MS.gene011400	PPI
MS.gene68345	MS.gene94551	PPI
MS.gene68345	MS.gene62540	PPI
MS.gene68345	MS.gene80714	PPI
MS.gene68345	MS.gene074100	PPI
MS.gene68345	MS.gene53650	PPI
MS.gene68345	MS.gene02545	PPI
MS.gene68345	MS.gene04915	PPI
MS.gene97948	MS.gene68345	PPI
MS.gene54637	MS.gene68345	PPI
MS.gene68345	MS.gene61009	PPI
MS.gene68345	MS.gene35563	PPI
MS.gene68345	MS.gene057167	PPI
MS.gene04917	MS.gene68345	PPI
MS.gene68345	MS.gene64311	PPI
MS.gene68345	MS.gene93763	PPI
MS.gene68345	MS.gene49270	PPI
MS.gene46886	MS.gene68345	PPI
MS.gene68345	MS.gene027655	PPI
MS.gene68345	MS.gene026940	PPI
MS.gene68345	MS.gene024717	PPI
MS.gene68345	MS.gene58860	PPI
MS.gene68345	MS.gene64327	PPI
MS.gene68345	MS.gene29794	PPI
MS.gene68345	MS.gene28338	PPI
MS.gene68345	MS.gene71511	PPI
MS.gene68345	MS.gene001381	PPI
MS.gene68345	MS.gene033361	PPI
MS.gene68345	MS.gene87673	PPI
MS.gene68345	MS.gene53659	PPI
MS.gene68345	MS.gene09960	PPI
MS.gene64324	MS.gene68345	PPI
MS.gene68345	MS.gene44354	PPI
MS.gene68345	MS.gene036602	PPI
MS.gene68345	MS.gene061768	PPI
MS.gene68345	MS.gene89216	PPI
MS.gene68345	MS.gene64308	PPI
MS.gene68345	MS.gene009021	PPI
MS.gene68345	MS.gene47195	PPI
MS.gene68345	MS.gene47134	PPI
MS.gene68345	MS.gene017446	PPI
MS.gene68345	MS.gene96914	PPI
MS.gene68345	MS.gene96913	PPI
MS.gene68345	MS.gene07422	PPI
MS.gene003880	MS.gene68345	PPI
MS.gene68345	MS.gene023648	PPI
MS.gene68345	MS.gene062239	PPI
MS.gene68345	MS.gene64313	PPI
MS.gene68345	MS.gene061261	PPI
MS.gene68345	MS.gene64307	PPI
MS.gene68345	MS.gene036930	PPI
MS.gene004899	MS.gene68345	PPI
MS.gene68345	MS.gene21932	PPI
MS.gene68345	MS.gene026618	PPI
MS.gene68345	MS.gene065998	PPI
MS.gene68345	MS.gene53648	PPI
MS.gene68345	MS.gene015470	PPI
MS.gene68345	MS.gene008831	PPI
MS.gene68345	MS.gene55545	PPI
MS.gene68345	MS.gene056461	PPI
MS.gene68345	MS.gene29459	PPI
MS.gene68345	MS.gene71207	PPI
MS.gene68345	MS.gene35562	PPI
MS.gene68345	MS.gene67281	PPI
MS.gene68345	MS.gene92775	PPI
MS.gene68345	MS.gene27879	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68345.t1	MTR_1g047100	82.143	140	25	0	1	140	1	140	1.02e-79	231
MS.gene68345.t1	MTR_1g046950	82.270	141	24	1	1	140	1	141	9.40e-77	224
MS.gene68345.t1	MTR_5g079340	71.831	142	34	2	1	140	1	138	6.73e-66	197
MS.gene68345.t1	MTR_5g008705	72.868	129	34	1	12	140	2	129	1.99e-61	185
MS.gene68345.t1	MTR_3g067610	63.235	136	45	1	5	140	6	136	2.06e-59	180
MS.gene68345.t1	MTR_5g008695	73.684	114	29	1	28	140	1	114	3.14e-55	169
MS.gene68345.t1	MTR_8g107110	56.204	137	58	1	3	139	23	157	1.07e-48	154
MS.gene68345.t1	MTR_6g079570	54.676	139	60	2	3	140	25	161	4.19e-47	150
MS.gene68345.t1	MTR_1g032070	48.889	135	68	1	5	139	47	180	2.31e-40	134
MS.gene68345.t1	MTR_8g036075	50.350	143	64	3	6	141	51	193	1.24e-36	124
MS.gene68345.t1	MTR_4g067270	46.715	137	70	2	5	139	6	141	8.93e-35	118
MS.gene68345.t1	MTR_4g067270	43.056	72	39	1	5	74	79	150	5.23e-11	57.4
MS.gene68345.t1	MTR_8g105230	44.186	129	71	1	8	136	40	167	6.83e-34	117
MS.gene68345.t1	MTR_6g023460	43.448	145	70	3	1	139	3	141	4.90e-33	113
MS.gene68345.t1	MTR_7g089760	48.507	134	66	2	8	139	9	141	1.10e-32	113
MS.gene68345.t1	MTR_7g075040	45.578	147	72	4	1	139	44	190	7.51e-32	112
MS.gene68345.t1	MTR_1g076650	42.537	134	76	1	6	139	14	146	1.06e-30	108
MS.gene68345.t1	MTR_1g076650	43.836	73	38	1	71	140	2	74	8.56e-11	56.6
MS.gene68345.t1	MTR_6g025320	41.045	134	78	1	6	139	14	146	2.78e-30	107
MS.gene68345.t1	MTR_6g025320	44.444	63	35	0	78	140	12	74	1.96e-12	60.8
MS.gene68345.t1	MTR_5g088320	41.045	134	78	1	6	139	14	146	3.06e-30	107
MS.gene68345.t1	MTR_5g088320	44.444	63	35	0	78	140	12	74	2.00e-12	60.8
MS.gene68345.t1	MTR_7g087610	40.299	134	79	1	6	139	14	146	3.34e-30	106
MS.gene68345.t1	MTR_7g087610	44.444	63	35	0	78	140	12	74	2.47e-12	60.8
MS.gene68345.t1	MTR_1g041285	40.741	135	79	1	5	139	13	146	1.07e-29	105
MS.gene68345.t1	MTR_1g041285	44.444	63	35	0	78	140	12	74	8.65e-11	56.6
MS.gene68345.t1	MTR_4g086260	39.855	138	80	1	3	140	56	190	6.00e-28	102
MS.gene68345.t1	MTR_7g090450	40.000	135	77	3	9	139	78	212	1.18e-27	102
MS.gene68345.t1	MTR_5g017510	39.855	138	80	2	3	139	47	182	2.49e-27	100
MS.gene68345.t1	MTR_5g017560	39.855	138	80	2	3	139	47	182	2.49e-27	100
MS.gene68345.t1	MTR_5g017550	40.000	140	76	2	3	139	47	181	2.36e-26	98.2
MS.gene68345.t1	MTR_3g089070	36.842	133	82	1	7	139	9	139	1.22e-25	94.7
MS.gene68345.t1	MTR_3g089090	36.842	133	82	1	7	139	8	138	1.46e-25	94.7
MS.gene68345.t1	MTR_2g098890	42.029	138	77	2	5	139	65	202	5.14e-25	95.1
MS.gene68345.t1	MTR_4g103650	36.090	133	83	1	7	139	5	135	1.43e-24	92.0
MS.gene68345.t1	MTR_8g066630	33.333	138	90	1	5	140	18	155	1.78e-24	92.4
MS.gene68345.t1	MTR_4g103630	37.226	137	76	2	7	139	9	139	1.01e-23	90.1
MS.gene68345.t1	MTR_0168s0120	40.541	111	65	1	29	139	1	110	1.33e-23	89.0
MS.gene68345.t1	MTR_6g025320	40.541	111	65	1	29	139	1	110	1.33e-23	89.0
MS.gene68345.t1	MTR_3g083470	37.037	135	68	3	8	139	97	217	1.38e-23	92.0
MS.gene68345.t1	MTR_4g103655	35.338	133	84	1	7	139	9	139	1.92e-23	89.4
MS.gene68345.t1	MTR_4g112460	32.117	137	92	1	5	140	12	148	6.12e-23	88.6
MS.gene68345.t1	MTR_4g115170	38.816	152	76	3	5	139	65	216	1.13e-22	89.4
MS.gene68345.t1	MTR_1g071150	35.338	133	84	1	9	141	17	147	1.36e-22	87.4
MS.gene68345.t1	MTR_8g069915	32.847	137	91	1	5	140	13	149	2.48e-22	87.0
MS.gene68345.t1	MTR_7g074240	37.671	146	80	3	5	139	25	170	4.41e-22	86.7
MS.gene68345.t1	MTR_7g115040	37.405	131	81	1	9	139	17	146	5.25e-22	85.9
MS.gene68345.t1	MTR_1g046960	64.407	59	21	0	28	86	1	59	4.50e-20	79.7
MS.gene68345.t1	MTR_8g078270	32.117	137	90	2	5	140	54	188	2.44e-19	80.1
MS.gene68345.t1	MTR_5g089320	34.783	138	83	3	5	140	374	506	2.00e-18	80.9
MS.gene68345.t1	MTR_1g030440	34.965	143	78	3	8	141	26	162	3.15e-18	76.6
MS.gene68345.t1	MTR_5g092810	35.000	140	78	4	5	139	398	529	3.61e-18	80.1
MS.gene68345.t1	MTR_3g051770	34.266	143	82	3	5	139	389	527	3.64e-18	80.1
MS.gene68345.t1	MTR_4g132070	33.813	139	81	4	5	139	397	528	4.82e-18	79.7
MS.gene68345.t1	MTR_5g009830	35.252	139	79	4	5	139	372	503	1.00e-17	78.6
MS.gene68345.t1	MTR_1g026190	34.532	139	80	4	5	139	388	519	3.28e-17	77.4
MS.gene68345.t1	MTR_8g099095	34.532	139	80	4	5	139	372	503	4.22e-17	77.0
MS.gene68345.t1	MTR_6g007613	32.593	135	90	1	5	139	30	163	4.99e-17	73.6
MS.gene68345.t1	MTR_6g007613	36.585	82	52	0	59	140	10	91	1.57e-12	61.6
MS.gene68345.t1	MTR_7g074020	31.852	135	91	1	5	139	31	164	5.10e-17	73.6
MS.gene68345.t1	MTR_7g074020	36.905	84	53	0	57	140	9	92	3.86e-13	63.2
MS.gene68345.t1	MTR_0028s0170	33.577	137	84	3	5	139	384	515	1.14e-16	75.9
MS.gene68345.t1	MTR_5g011850	30.882	136	91	2	5	140	13	145	1.55e-16	71.6
MS.gene68345.t1	MTR_3g088655	30.464	151	88	4	5	141	9	156	3.87e-16	70.9
MS.gene68345.t1	MTR_5g027000	31.008	129	86	2	9	136	27	153	8.32e-16	70.1
MS.gene68345.t1	MTR_5g079470	56.667	60	25	1	7	66	13	71	1.66e-15	67.4
MS.gene68345.t1	MTR_4g107490	32.394	142	84	4	3	139	377	511	2.92e-15	71.6
MS.gene68345.t1	MTR_4g132040	32.857	140	81	4	5	139	401	532	1.38e-14	69.7
MS.gene68345.t1	MTR_3g055570	30.657	137	79	1	5	141	53	173	2.08e-14	67.0
MS.gene68345.t1	MTR_7g091890	33.588	131	85	1	9	139	368	496	4.34e-14	68.2
MS.gene68345.t1	MTR_7g074020	30.252	119	82	1	5	123	31	148	2.27e-13	63.5
MS.gene68345.t1	MTR_7g074020	36.905	84	53	0	57	140	9	92	4.23e-13	63.2
MS.gene68345.t1	MTR_6g007613	31.092	119	81	1	5	123	30	147	2.38e-13	63.5
MS.gene68345.t1	MTR_6g007613	36.585	82	52	0	59	140	10	91	1.15e-12	62.0
MS.gene68345.t1	MTR_7g068710	30.370	135	92	1	5	139	362	494	3.30e-13	65.9
MS.gene68345.t1	MTR_8g096050	28.571	140	93	1	2	141	53	185	9.20e-13	64.3
MS.gene68345.t1	MTR_4g066660	30.216	139	90	3	3	139	376	509	1.62e-12	63.9
MS.gene68345.t1	MTR_3g098460	27.737	137	92	1	5	141	34	163	1.72e-12	63.5
MS.gene68345.t1	MTR_3g098090	29.496	139	86	4	5	139	338	468	3.10e-12	63.2
MS.gene68345.t1	MTR_3g098070	29.496	139	86	4	5	139	335	465	3.83e-12	62.8
MS.gene68345.t1	MTR_1g096490	31.884	138	84	4	5	139	336	466	6.91e-12	62.0
MS.gene68345.t1	MTR_1g054865	31.884	138	84	4	5	139	467	597	8.10e-12	62.0
MS.gene68345.t1	MTR_5g022030	27.941	136	87	4	9	139	411	540	4.81e-11	59.7
MS.gene68345.t1	MTR_3g055585	26.119	134	83	1	5	138	53	170	7.27e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68345.t1	AT1G18210	55.147	136	56	1	5	140	24	154	1.33e-48	154
MS.gene68345.t1	AT1G18210	55.147	136	56	1	5	140	24	154	1.33e-48	154
MS.gene68345.t1	AT1G66400	52.899	138	64	1	5	141	16	153	4.73e-47	149
MS.gene68345.t1	AT1G73630	52.206	136	60	1	5	140	21	151	7.71e-46	147
MS.gene68345.t1	AT5G37770	51.748	143	65	3	1	140	15	156	3.90e-43	140
MS.gene68345.t1	AT5G37770	51.748	143	65	3	1	140	15	156	3.90e-43	140
MS.gene68345.t1	AT1G24620	45.324	139	65	2	8	141	41	173	7.86e-37	124
MS.gene68345.t1	AT1G05990	45.985	137	72	1	5	139	6	142	4.71e-35	119
MS.gene68345.t1	AT2G15680	44.928	138	69	2	5	140	51	183	1.68e-34	119
MS.gene68345.t1	AT3G07490	50.746	134	63	2	8	139	9	141	2.14e-34	117
MS.gene68345.t1	AT5G17470	46.043	139	70	2	5	140	3	139	3.18e-34	117
MS.gene68345.t1	AT3G03400	42.636	129	73	1	5	132	6	134	2.12e-33	114
MS.gene68345.t1	AT2G36180	47.015	134	69	1	8	139	4	137	7.37e-33	113
MS.gene68345.t1	AT4G03290	43.382	136	73	2	8	139	9	144	3.10e-31	109
MS.gene68345.t1	AT2G43290	43.056	144	70	3	5	139	66	206	6.43e-31	110
MS.gene68345.t1	AT5G37780	41.045	134	78	1	6	139	14	146	1.32e-30	107
MS.gene68345.t1	AT5G37780	44.444	63	35	0	78	140	12	74	2.03e-12	60.8
MS.gene68345.t1	AT1G66410	41.045	134	78	1	6	139	14	146	1.32e-30	107
MS.gene68345.t1	AT1G66410	44.444	63	35	0	78	140	12	74	2.03e-12	60.8
MS.gene68345.t1	AT5G21274	41.791	134	77	1	6	139	14	146	1.64e-30	107
MS.gene68345.t1	AT5G21274	44.444	63	35	0	78	140	12	74	2.16e-12	60.8
MS.gene68345.t1	AT3G10190	43.609	133	71	3	9	139	75	205	1.92e-30	109
MS.gene68345.t1	AT3G43810	41.045	134	78	1	6	139	14	146	2.91e-30	107
MS.gene68345.t1	AT3G43810	44.444	63	35	0	78	140	12	74	2.05e-12	60.8
MS.gene68345.t1	AT3G56800	41.045	134	78	1	6	139	14	146	3.11e-30	107
MS.gene68345.t1	AT3G56800	44.444	63	35	0	78	140	12	74	2.14e-12	60.8
MS.gene68345.t1	AT2G27030	41.045	134	78	1	6	139	14	146	3.11e-30	107
MS.gene68345.t1	AT2G27030	44.444	63	35	0	78	140	12	74	2.14e-12	60.8
MS.gene68345.t1	AT2G41110	41.045	134	78	1	6	139	14	146	3.11e-30	107
MS.gene68345.t1	AT2G41110	44.444	63	35	0	78	140	12	74	2.14e-12	60.8
MS.gene68345.t1	AT2G27030	41.985	131	75	1	9	139	17	146	1.52e-29	106
MS.gene68345.t1	AT2G27030	44.444	63	35	0	78	140	12	74	5.38e-12	60.5
MS.gene68345.t1	AT3G43810	41.985	131	75	1	9	139	17	146	2.78e-29	106
MS.gene68345.t1	AT3G43810	44.444	63	35	0	78	140	12	74	1.20e-11	60.1
MS.gene68345.t1	AT3G59440	43.478	138	72	3	5	139	52	186	3.71e-29	105
MS.gene68345.t1	AT3G22930	40.441	136	80	1	6	141	37	171	4.97e-29	104
MS.gene68345.t1	AT4G14640	41.007	139	71	2	6	139	15	147	2.39e-28	102
MS.gene68345.t1	AT4G12860	44.030	134	72	2	8	139	9	141	3.18e-28	102
MS.gene68345.t1	AT2G41110	37.671	146	78	2	6	139	14	158	7.95e-27	98.6
MS.gene68345.t1	AT5G37780	36.913	149	78	2	6	139	14	161	2.43e-26	97.4
MS.gene68345.t1	AT5G37780	40.164	122	72	1	18	139	13	133	1.03e-25	95.1
MS.gene68345.t1	AT1G66410	40.164	122	72	1	18	139	36	156	1.65e-25	95.1
MS.gene68345.t1	AT2G41100	39.333	150	76	2	6	140	14	163	1.99e-25	98.6
MS.gene68345.t1	AT2G41100	38.411	151	77	2	6	140	103	253	8.31e-25	97.1
MS.gene68345.t1	AT2G41100	39.333	150	76	2	6	140	14	163	1.99e-25	98.6
MS.gene68345.t1	AT2G41100	38.411	151	77	2	6	140	103	253	8.31e-25	97.1
MS.gene68345.t1	AT5G37780	40.164	122	72	1	18	139	52	172	2.57e-25	95.1
MS.gene68345.t1	AT2G41410	35.821	134	84	2	9	140	75	208	3.30e-25	95.9
MS.gene68345.t1	AT2G41100	38.411	151	77	2	6	140	68	218	3.99e-25	97.4
MS.gene68345.t1	AT2G41100	36.719	128	66	2	28	140	1	128	7.70e-18	77.8
MS.gene68345.t1	AT2G41100	38.411	151	77	2	6	140	68	218	3.99e-25	97.4
MS.gene68345.t1	AT2G41100	36.719	128	66	2	28	140	1	128	7.70e-18	77.8
MS.gene68345.t1	AT2G41100	38.411	151	77	2	6	140	68	218	3.99e-25	97.4
MS.gene68345.t1	AT2G41100	36.719	128	66	2	28	140	1	128	7.70e-18	77.8
MS.gene68345.t1	AT1G32250	32.143	140	90	1	5	139	17	156	5.31e-25	94.0
MS.gene68345.t1	AT5G42380	34.074	135	89	0	5	139	50	184	6.26e-25	94.4
MS.gene68345.t1	AT4G14640	40.157	127	65	2	18	139	9	129	3.79e-24	90.9
MS.gene68345.t1	AT1G66410	40.541	111	65	1	29	139	1	110	5.26e-24	90.1
MS.gene68345.t1	AT1G66410	40.541	111	65	1	29	139	1	110	5.26e-24	90.1
MS.gene68345.t1	AT3G43810	40.541	111	65	1	29	139	1	110	1.40e-23	89.0
MS.gene68345.t1	AT3G43810	40.541	111	65	1	29	139	1	110	1.40e-23	89.0
MS.gene68345.t1	AT4G20780	35.065	154	81	2	5	139	30	183	1.51e-22	88.2
MS.gene68345.t1	AT1G18530	31.250	144	95	2	1	140	1	144	1.53e-22	87.4
MS.gene68345.t1	AT4G37010	35.714	140	79	2	5	139	28	161	1.87e-21	85.1
MS.gene68345.t1	AT3G50360	34.074	135	88	1	5	139	28	161	2.07e-21	84.7
MS.gene68345.t1	AT3G50360	37.333	75	47	0	66	140	15	89	6.90e-11	57.4
MS.gene68345.t1	AT4G37010	35.714	140	79	2	5	139	32	165	2.07e-21	85.1
MS.gene68345.t1	AT1G76640	36.090	133	84	1	8	139	26	158	6.59e-21	83.2
MS.gene68345.t1	AT2G41090	34.328	134	84	1	6	139	14	143	9.76e-21	83.6
MS.gene68345.t1	AT3G50770	30.496	141	94	2	5	141	65	205	1.62e-20	83.6
MS.gene68345.t1	AT3G51920	31.915	141	92	2	2	139	7	146	4.11e-20	80.9
MS.gene68345.t1	AT1G76650	35.606	132	83	1	8	139	47	176	4.82e-20	81.6
MS.gene68345.t1	AT1G76650	35.606	132	83	1	8	139	47	176	4.82e-20	81.6
MS.gene68345.t1	AT1G21550	37.838	148	73	4	5	139	11	152	6.65e-20	80.5
MS.gene68345.t1	AT3G25600	29.927	137	95	1	5	140	13	149	3.09e-19	79.0
MS.gene68345.t1	AT4G04695	34.532	139	80	4	5	139	337	468	4.19e-19	82.8
MS.gene68345.t1	AT5G44460	35.616	146	83	3	5	139	29	174	4.50e-19	79.0
MS.gene68345.t1	AT3G03000	31.618	136	93	0	5	140	21	156	4.66e-19	78.6
MS.gene68345.t1	AT3G03000	43.333	60	34	0	2	61	92	151	3.38e-11	58.2
MS.gene68345.t1	AT1G76650	35.606	132	73	2	8	139	47	166	2.47e-18	77.0
MS.gene68345.t1	AT4G23650	35.971	139	78	4	5	139	384	515	2.50e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04740	35.252	139	79	4	5	139	374	505	2.79e-18	80.5
MS.gene68345.t1	AT4G04700	34.532	139	80	4	5	139	337	468	5.55e-18	79.3
MS.gene68345.t1	AT4G04720	35.252	139	79	4	5	139	385	516	6.47e-18	79.3
MS.gene68345.t1	AT4G04720	35.252	139	79	4	5	139	385	516	6.47e-18	79.3
MS.gene68345.t1	AT4G21940	35.971	139	78	4	5	139	407	538	6.50e-18	79.3
MS.gene68345.t1	AT4G21940	35.971	139	78	4	5	139	407	538	6.61e-18	79.3
MS.gene68345.t1	AT2G41100	36.800	125	63	2	32	140	4	128	1.56e-17	75.5
MS.gene68345.t1	AT5G19360	34.532	139	80	3	5	139	374	505	1.85e-17	78.2
MS.gene68345.t1	AT1G50700	35.252	139	79	4	5	139	379	510	1.94e-17	77.8
MS.gene68345.t1	AT3G20410	35.971	139	78	4	5	139	397	528	2.36e-17	77.8
MS.gene68345.t1	AT3G20410	35.971	139	78	4	5	139	397	528	2.36e-17	77.8
MS.gene68345.t1	AT3G01830	35.000	140	84	5	3	139	10	145	2.83e-17	73.6
MS.gene68345.t1	AT3G03410	30.597	134	83	1	6	139	4	127	3.48e-17	72.8
MS.gene68345.t1	AT1G76040	35.252	139	79	4	5	139	179	310	6.06e-17	75.9
MS.gene68345.t1	AT1G76040	35.252	139	79	4	5	139	179	310	6.06e-17	75.9
MS.gene68345.t1	AT5G12180	33.813	139	81	3	5	139	379	510	7.65e-17	76.3
MS.gene68345.t1	AT1G74740	38.194	144	73	5	3	139	363	497	7.92e-17	76.3
MS.gene68345.t1	AT1G61950	35.036	137	82	3	5	139	405	536	9.74e-17	75.9
MS.gene68345.t1	AT1G76040	35.252	139	79	4	5	139	417	548	1.75e-16	75.1
MS.gene68345.t1	AT1G62820	30.147	136	92	2	5	140	14	146	9.48e-16	69.7
MS.gene68345.t1	AT5G17480	59.649	57	22	1	8	64	13	68	1.26e-15	67.8
MS.gene68345.t1	AT3G51850	31.111	135	91	1	5	139	360	492	2.22e-15	72.0
MS.gene68345.t1	AT1G18890	35.417	144	77	5	3	139	367	501	3.92e-15	71.2
MS.gene68345.t1	AT3G22930	37.234	94	58	1	6	99	37	129	6.51e-15	67.0
MS.gene68345.t1	AT1G12310	29.412	136	93	2	5	140	14	146	7.74e-15	67.4
MS.gene68345.t1	AT4G04710	32.374	139	83	4	5	139	324	455	2.12e-14	69.3
MS.gene68345.t1	AT4G04710	32.374	139	83	4	5	139	338	469	2.14e-14	69.3
MS.gene68345.t1	AT4G04710	32.374	139	83	4	5	139	351	482	2.15e-14	69.3
MS.gene68345.t1	AT3G03430	56.140	57	24	1	8	64	13	68	2.35e-14	64.3
MS.gene68345.t1	AT4G14640	37.000	100	52	2	6	100	15	108	2.41e-14	65.5
MS.gene68345.t1	AT3G57530	33.824	136	85	3	5	139	369	500	1.96e-13	66.6
MS.gene68345.t1	AT5G12480	32.353	136	89	2	5	139	365	498	3.08e-13	65.9
MS.gene68345.t1	AT5G12480	32.353	136	89	2	5	139	271	404	3.09e-13	65.9
MS.gene68345.t1	AT4G04710	31.915	141	83	5	5	139	351	484	3.10e-13	65.9
MS.gene68345.t1	AT1G50700	29.697	165	79	5	5	139	379	536	4.60e-13	65.5
MS.gene68345.t1	AT2G41860	31.111	135	91	1	5	139	360	492	4.80e-13	65.5
MS.gene68345.t1	AT2G41860	31.111	135	91	1	5	139	360	492	4.94e-13	65.5
MS.gene68345.t1	AT1G35670	32.374	139	82	4	5	139	332	462	5.12e-13	65.1
MS.gene68345.t1	AT5G66210	30.000	140	87	4	5	139	370	503	1.23e-12	64.3
MS.gene68345.t1	AT5G66210	30.000	140	87	4	5	139	370	503	1.23e-12	64.3
MS.gene68345.t1	AT4G09570	32.374	139	82	4	5	139	331	461	1.37e-12	63.9
MS.gene68345.t1	AT5G07320	27.007	137	93	1	5	141	38	167	1.75e-12	63.5
MS.gene68345.t1	AT3G10660	29.197	137	89	3	5	139	492	622	3.70e-12	62.8
MS.gene68345.t1	AT3G10660	29.197	137	89	3	5	139	492	622	3.70e-12	62.8
MS.gene68345.t1	AT5G04870	30.435	138	86	4	5	139	456	586	5.19e-12	62.4
MS.gene68345.t1	AT2G41100	42.857	63	36	0	78	140	12	74	6.81e-12	59.7
MS.gene68345.t1	AT2G17290	31.655	139	83	4	5	139	391	521	9.82e-12	61.6
MS.gene68345.t1	AT2G17290	31.655	139	83	4	5	139	391	521	9.82e-12	61.6
MS.gene68345.t1	AT5G51050	27.737	137	92	1	5	141	52	181	1.37e-11	61.2
MS.gene68345.t1	AT5G61810	28.467	137	91	2	5	141	37	166	2.24e-11	60.5
MS.gene68345.t1	AT5G19450	30.882	136	91	2	5	139	363	496	9.73e-11	58.9
MS.gene68345.t1	AT5G19450	30.882	136	91	2	5	139	363	496	9.73e-11	58.9

Find 30 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATCGTTGCGTTGGAAAT+TGG	0.269720	1.3:-28593652	None:intergenic
AACGATGCTGCTGCTGCCGC+TGG	0.313949	1.3:+28593666	MS.gene68345:CDS
GAAGAGATGCTTTCGAAGCT+TGG	0.383501	1.3:+28593543	MS.gene68345:CDS
TAATTCATCGGAAGTTGGTT+TGG	0.387629	1.3:-28593568	None:intergenic
AAGAACGACGTGCAGTTCAT+TGG	0.391142	1.3:-28593754	None:intergenic
CACGTCGTTCTTAACAAACT+TGG	0.419677	1.3:+28593765	MS.gene68345:CDS
AGAACGACGTGCAGTTCATT+GGG	0.442756	1.3:-28593753	None:intergenic
ACGATGCTGCTGCTGCCGCT+GGG	0.457354	1.3:+28593667	MS.gene68345:CDS
CATCATTTGCTTTAATTCAT+CGG	0.459609	1.3:-28593580	None:intergenic
CGATGAATTAAAGCAAATGA+TGG	0.470795	1.3:+28593581	MS.gene68345:CDS
TGCTTTAATTCATCGGAAGT+TGG	0.476195	1.3:-28593573	None:intergenic
TGCTGCTGCCGCTGGGAAAG+AGG	0.494599	1.3:+28593674	MS.gene68345:CDS
TCATTCTCTGACAATCACTA+AGG	0.505760	1.3:-28593800	None:intergenic
TGAGGAGTTCAAGAAGATGA+TGG	0.530483	1.3:+28593863	MS.gene68345:CDS
ATGGAAAATATTGATCAGAA+TGG	0.535038	1.3:+28593600	MS.gene68345:CDS
CAGCAGCAGCATCGTTGCGT+TGG	0.547955	1.3:-28593659	None:intergenic
AAGGTTGACGCGGATGGAGA+TGG	0.551637	1.3:+28593828	MS.gene68345:CDS
ATAAGCAAGGTTGACGCGGA+TGG	0.557348	1.3:+28593822	MS.gene68345:CDS
AGATGGAAAAGTTAACTTTG+AGG	0.561239	1.3:+28593845	MS.gene68345:CDS
TTCAACAAGTTTGACAAGAA+CGG	0.574403	1.3:+28593492	MS.gene68345:CDS
CATTCTCTGACAATCACTAA+GGG	0.587635	1.3:-28593799	None:intergenic
CGTCTTTGTCAAGATCGTAA+AGG	0.594389	1.3:-28593719	None:intergenic
AATATTGATCAGAATGGCGA+CGG	0.607358	1.3:+28593606	MS.gene68345:CDS
CGACGGAAAGATCTCTGTCT+CGG	0.608817	1.3:+28593515	MS.gene68345:CDS
AAGTTTGACAAGAACGGCGA+CGG	0.621450	1.3:+28593498	MS.gene68345:CDS
CTTTACGATCTTGACAAAGA+CGG	0.634429	1.3:+28593720	MS.gene68345:CDS
AATGATAAGCAAGGTTGACG+CGG	0.647152	1.3:+28593818	MS.gene68345:CDS
TTGTCAGAGAATGATAAGCA+AGG	0.687328	1.3:+28593809	MS.gene68345:CDS
AATCTCTTCCTCTTTCCCAG+CGG	0.698712	1.3:-28593682	None:intergenic
CAACTGCACCATGGACGATG+TGG	0.701403	1.3:+28593458	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATGGAAAATATTGATCAGAA+TGG	+	chr1.3:28593600-28593619	MS.gene68345:CDS	25.0%
!	CATCATTTGCTTTAATTCAT+CGG	-	chr1.3:28593583-28593602	None:intergenic	25.0%
	AGATGGAAAAGTTAACTTTG+AGG	+	chr1.3:28593845-28593864	MS.gene68345:CDS	30.0%
	CGATGAATTAAAGCAAATGA+TGG	+	chr1.3:28593581-28593600	MS.gene68345:CDS	30.0%
	TTCAACAAGTTTGACAAGAA+CGG	+	chr1.3:28593492-28593511	MS.gene68345:CDS	30.0%
	AATATTGATCAGAATGGCGA+CGG	+	chr1.3:28593606-28593625	MS.gene68345:CDS	35.0%
	CATTCTCTGACAATCACTAA+GGG	-	chr1.3:28593802-28593821	None:intergenic	35.0%
	CTTTACGATCTTGACAAAGA+CGG	+	chr1.3:28593720-28593739	MS.gene68345:CDS	35.0%
	TCATTCTCTGACAATCACTA+AGG	-	chr1.3:28593803-28593822	None:intergenic	35.0%
	TGCTTTAATTCATCGGAAGT+TGG	-	chr1.3:28593576-28593595	None:intergenic	35.0%
	TTGTCAGAGAATGATAAGCA+AGG	+	chr1.3:28593809-28593828	MS.gene68345:CDS	35.0%
!	TAATTCATCGGAAGTTGGTT+TGG	-	chr1.3:28593571-28593590	None:intergenic	35.0%
	AATGATAAGCAAGGTTGACG+CGG	+	chr1.3:28593818-28593837	MS.gene68345:CDS	40.0%
	CACGTCGTTCTTAACAAACT+TGG	+	chr1.3:28593765-28593784	MS.gene68345:CDS	40.0%
	CGTCTTTGTCAAGATCGTAA+AGG	-	chr1.3:28593722-28593741	None:intergenic	40.0%
	TGAGGAGTTCAAGAAGATGA+TGG	+	chr1.3:28593863-28593882	MS.gene68345:CDS	40.0%
	AAGAACGACGTGCAGTTCAT+TGG	-	chr1.3:28593757-28593776	None:intergenic	45.0%
	AAGTTTGACAAGAACGGCGA+CGG	+	chr1.3:28593498-28593517	MS.gene68345:CDS	45.0%
	AATCTCTTCCTCTTTCCCAG+CGG	-	chr1.3:28593685-28593704	None:intergenic	45.0%
	AGAACGACGTGCAGTTCATT+GGG	-	chr1.3:28593756-28593775	None:intergenic	45.0%
	AGCATCGTTGCGTTGGAAAT+TGG	-	chr1.3:28593655-28593674	None:intergenic	45.0%
	GAAGAGATGCTTTCGAAGCT+TGG	+	chr1.3:28593543-28593562	MS.gene68345:CDS	45.0%
	ATAAGCAAGGTTGACGCGGA+TGG	+	chr1.3:28593822-28593841	MS.gene68345:CDS	50.0%
	CGACGGAAAGATCTCTGTCT+CGG	+	chr1.3:28593515-28593534	MS.gene68345:CDS	50.0%
	AAGGTTGACGCGGATGGAGA+TGG	+	chr1.3:28593828-28593847	MS.gene68345:CDS	55.0%
	CAGCAGCAGCATCGTTGCGT+TGG	-	chr1.3:28593662-28593681	None:intergenic	60.0%
	AACGATGCTGCTGCTGCCGC+TGG	+	chr1.3:28593666-28593685	MS.gene68345:CDS	65.0%
	ACGATGCTGCTGCTGCCGCT+GGG	+	chr1.3:28593667-28593686	MS.gene68345:CDS	65.0%
	TGCTGCTGCCGCTGGGAAAG+AGG	+	chr1.3:28593674-28593693	MS.gene68345:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	28593468	28593893	28593468	ID=MS.gene68345
chr1.3	mRNA	28593468	28593893	28593468	ID=MS.gene68345.t1;Parent=MS.gene68345
chr1.3	exon	28593468	28593893	28593468	ID=MS.gene68345.t1.exon1;Parent=MS.gene68345.t1
chr1.3	CDS	28593468	28593893	28593468	ID=cds.MS.gene68345.t1;Parent=MS.gene68345.t1

Gene Sequence

>MS.gene68345

ATGGACGATGTGGTGCGCAACATCTTCAACAAGTTTGACAAGAACGGCGACGGAAAGATCTCTGTCTCGGAACTAGAAGAGATGCTTTCGAAGCTTGGATCCAAACCAACTTCCGATGAATTAAAGCAAATGATGGAAAATATTGATCAGAATGGCGACGGTTACATTGATCTCAAAGAATTTGCCAATTTCCAACGCAACGATGCTGCTGCTGCCGCTGGGAAAGAGGAAGAGATTCGTGATGCTTTCAACCTTTACGATCTTGACAAAGACGGTCTCATCTCTCCCAATGAACTGCACGTCGTTCTTAACAAACTTGGTGAGAAGTGCTCCCTTAGTGATTGTCAGAGAATGATAAGCAAGGTTGACGCGGATGGAGATGGAAAAGTTAACTTTGAGGAGTTCAAGAAGATGATGGCTATCTGA

Protein sequence

>MS.gene68345.t1

MDDVVRNIFNKFDKNGDGKISVSELEEMLSKLGSKPTSDELKQMMENIDQNGDGYIDLKEFANFQRNDAAAAAGKEEEIRDAFNLYDLDKDGLISPNELHVVLNKLGEKCSLSDCQRMISKVDADGDGKVNFEEFKKMMAI