AlfalfaGEDB | MS.gene64327

M. sativa cultivar XinJiangDaYe / MS.gene64327

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64327.t1	XP_013467207.1	65	140	47	1	1	138	1	140	4.30E-22	114.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64327.t1	Q9C9U8	58.4	137	54	1	2	138	18	151	8.5e-11	68.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64327.t1	A0A072VI04	65.0	140	47	1	1	138	1	140	3.1e-22	114.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene64324	MS.gene64327	PPI
MS.gene011400	MS.gene64327	PPI
MS.gene64327	MS.gene64316	PPI
MS.gene64327	MS.gene64313	PPI
MS.gene64327	MS.gene061261	PPI
MS.gene64327	MS.gene036930	PPI
MS.gene64327	MS.gene21932	PPI
MS.gene64327	MS.gene026618	PPI
MS.gene35563	MS.gene64327	PPI
MS.gene55496	MS.gene64327	PPI
MS.gene003880	MS.gene64327	PPI
MS.gene54637	MS.gene64327	PPI
MS.gene67281	MS.gene64327	PPI
MS.gene64327	MS.gene065998	PPI
MS.gene64327	MS.gene53648	PPI
MS.gene64327	MS.gene015470	PPI
MS.gene64327	MS.gene008831	PPI
MS.gene64327	MS.gene55545	PPI
MS.gene64327	MS.gene056461	PPI
MS.gene64327	MS.gene64310	PPI
MS.gene64327	MS.gene29459	PPI
MS.gene64327	MS.gene71207	PPI
MS.gene21155	MS.gene64327	PPI
MS.gene64327	MS.gene35562	PPI
MS.gene64327	MS.gene92775	PPI
MS.gene004899	MS.gene64327	PPI
MS.gene64327	MS.gene53662	PPI
MS.gene64327	MS.gene63281	PPI
MS.gene64327	MS.gene008225	PPI
MS.gene022455	MS.gene64327	PPI
MS.gene64327	MS.gene21696	PPI
MS.gene64327	MS.gene29793	PPI
MS.gene64327	MS.gene98294	PPI
MS.gene64327	MS.gene05284	PPI
MS.gene64327	MS.gene22553	PPI
MS.gene64327	MS.gene53465	PPI
MS.gene64327	MS.gene074045	PPI
MS.gene64327	MS.gene03228	PPI
MS.gene64327	MS.gene000738	PPI
MS.gene64327	MS.gene85596	PPI
MS.gene64327	MS.gene46237	PPI
MS.gene64327	MS.gene056383	PPI
MS.gene64327	MS.gene64317	PPI
MS.gene64327	MS.gene025777	PPI
MS.gene64327	MS.gene040331	PPI
MS.gene64327	MS.gene94551	PPI
MS.gene040127	MS.gene64327	PPI
MS.gene64327	MS.gene63000	PPI
MS.gene64327	MS.gene93087	PPI
MS.gene64327	MS.gene046988	PPI
MS.gene038456	MS.gene64327	PPI
MS.gene64327	MS.gene057293	PPI
MS.gene64327	MS.gene74452	PPI
MS.gene64327	MS.gene09934	PPI
MS.gene64327	MS.gene58906	PPI
MS.gene64327	MS.gene79028	PPI
MS.gene64327	MS.gene64311	PPI
MS.gene64327	MS.gene49271	PPI
MS.gene64327	MS.gene053319	PPI
MS.gene64327	MS.gene026940	PPI
MS.gene64327	MS.gene000724	PPI
MS.gene64327	MS.gene65954	PPI
MS.gene64327	MS.gene98295	PPI
MS.gene64327	MS.gene022456	PPI
MS.gene64327	MS.gene001246	PPI
MS.gene61009	MS.gene64327	PPI
MS.gene64327	MS.gene28338	PPI
MS.gene64327	MS.gene041795	PPI
MS.gene64327	MS.gene96922	PPI
MS.gene64327	MS.gene55496	PPI
MS.gene64327	MS.gene025797	PPI
MS.gene64327	MS.gene21931	PPI
MS.gene64327	MS.gene27516	PPI
MS.gene64327	MS.gene64314	PPI
MS.gene64327	MS.gene040127	PPI
MS.gene68345	MS.gene64327	PPI
MS.gene64327	MS.gene09960	PPI
MS.gene001246	MS.gene64327	PPI
MS.gene62258	MS.gene64327	PPI
MS.gene64327	MS.gene62540	PPI
MS.gene64327	MS.gene47134	PPI
MS.gene64327	MS.gene80714	PPI
MS.gene64327	MS.gene074100	PPI
MS.gene64327	MS.gene53650	PPI
MS.gene64327	MS.gene02545	PPI
MS.gene64327	MS.gene04915	PPI
MS.gene64327	MS.gene96913	PPI
MS.gene64327	MS.gene61009	PPI
MS.gene64327	MS.gene35563	PPI
MS.gene64327	MS.gene057167	PPI
MS.gene27879	MS.gene64327	PPI
MS.gene040331	MS.gene64327	PPI
MS.gene64327	MS.gene93763	PPI
MS.gene64327	MS.gene49270	PPI
MS.gene64327	MS.gene64307	PPI
MS.gene64327	MS.gene024717	PPI
MS.gene58860	MS.gene64327	PPI
MS.gene27516	MS.gene64327	PPI
MS.gene97948	MS.gene64327	PPI
MS.gene000738	MS.gene64327	PPI
MS.gene64327	MS.gene29794	PPI
MS.gene64307	MS.gene64327	PPI
MS.gene04917	MS.gene64327	PPI
MS.gene64327	MS.gene71511	PPI
MS.gene64327	MS.gene001381	PPI
MS.gene64327	MS.gene033361	PPI
MS.gene64327	MS.gene87673	PPI
MS.gene062239	MS.gene64327	PPI
MS.gene46886	MS.gene64327	PPI
MS.gene64327	MS.gene53659	PPI
MS.gene64327	MS.gene44354	PPI
MS.gene64327	MS.gene036602	PPI
MS.gene64327	MS.gene061768	PPI
MS.gene64327	MS.gene89216	PPI
MS.gene64327	MS.gene64308	PPI
MS.gene64327	MS.gene009021	PPI
MS.gene64327	MS.gene47195	PPI
MS.gene64327	MS.gene017446	PPI
MS.gene64327	MS.gene96914	PPI
MS.gene008225	MS.gene64327	PPI
MS.gene027655	MS.gene64327	PPI
MS.gene64327	MS.gene060446	PPI
MS.gene64327	MS.gene07422	PPI
MS.gene64327	MS.gene023648	PPI
MS.gene64327	MS.gene062239	PPI
MS.gene056383	MS.gene64327	PPI
MS.gene64327	MS.gene013748	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64327.t1	MTR_1g046950	79.433	141	26	1	1	138	1	141	4.30e-76	222
MS.gene64327.t1	MTR_1g047100	80.000	140	26	1	1	138	1	140	2.57e-75	220
MS.gene64327.t1	MTR_5g079340	73.188	138	37	0	1	138	1	138	1.47e-68	203
MS.gene64327.t1	MTR_5g008705	75.781	128	30	1	12	138	2	129	1.46e-61	185
MS.gene64327.t1	MTR_3g067610	63.971	136	46	1	3	138	4	136	6.37e-60	181
MS.gene64327.t1	MTR_5g008695	74.561	114	26	1	28	138	1	114	3.94e-54	166
MS.gene64327.t1	MTR_6g079570	53.285	137	63	1	3	138	25	161	1.25e-45	146
MS.gene64327.t1	MTR_8g107110	53.333	135	63	0	3	137	23	157	3.69e-45	145
MS.gene64327.t1	MTR_1g032070	44.853	136	74	1	3	137	45	180	4.20e-37	125
MS.gene64327.t1	MTR_8g105230	41.791	134	73	2	4	134	36	167	3.30e-33	115
MS.gene64327.t1	MTR_4g067270	42.754	138	76	2	3	137	4	141	1.39e-31	110
MS.gene64327.t1	MTR_7g089760	45.255	137	72	2	4	137	5	141	2.87e-31	109
MS.gene64327.t1	MTR_8g036075	44.138	145	72	3	4	139	49	193	2.00e-30	108
MS.gene64327.t1	MTR_7g075040	42.568	148	73	4	1	137	44	190	8.21e-30	107
MS.gene64327.t1	MTR_6g023460	41.221	131	77	0	7	137	11	141	2.16e-29	104
MS.gene64327.t1	MTR_4g086260	40.441	136	80	1	3	138	56	190	1.49e-27	101
MS.gene64327.t1	MTR_3g089070	37.405	131	82	0	7	137	9	139	2.91e-26	96.3
MS.gene64327.t1	MTR_3g089090	37.405	131	82	0	7	137	8	138	2.96e-26	96.3
MS.gene64327.t1	MTR_1g041285	37.778	135	83	1	4	137	12	146	3.24e-26	96.7
MS.gene64327.t1	MTR_5g017550	35.556	135	87	0	3	137	47	181	6.33e-26	97.1
MS.gene64327.t1	MTR_7g087610	35.556	135	86	1	4	137	12	146	7.74e-26	95.5
MS.gene64327.t1	MTR_7g087610	43.478	69	36	1	73	138	6	74	5.64e-11	57.0
MS.gene64327.t1	MTR_6g025320	36.296	135	85	1	4	137	12	146	7.74e-26	95.5
MS.gene64327.t1	MTR_6g025320	43.478	69	36	1	73	138	6	74	8.86e-11	56.6
MS.gene64327.t1	MTR_5g088320	36.296	135	85	1	4	137	12	146	8.17e-26	95.5
MS.gene64327.t1	MTR_5g017510	37.226	137	83	2	3	137	47	182	1.16e-25	96.3
MS.gene64327.t1	MTR_5g017560	37.226	137	83	2	3	137	47	182	1.16e-25	96.3
MS.gene64327.t1	MTR_1g076650	37.594	133	82	1	6	137	14	146	1.43e-25	94.7
MS.gene64327.t1	MTR_4g103650	36.567	134	85	0	4	137	2	135	1.27e-24	92.0
MS.gene64327.t1	MTR_7g090450	38.028	142	82	3	4	139	73	214	1.72e-24	94.0
MS.gene64327.t1	MTR_2g098890	37.857	140	82	2	3	137	63	202	7.11e-24	92.0
MS.gene64327.t1	MTR_4g103655	35.821	134	86	0	4	137	6	139	1.40e-23	89.4
MS.gene64327.t1	MTR_4g103630	35.075	134	87	0	4	137	6	139	3.15e-23	88.6
MS.gene64327.t1	MTR_7g074240	37.671	146	78	3	5	137	25	170	5.23e-22	86.7
MS.gene64327.t1	MTR_8g066630	31.884	138	90	1	4	137	17	154	7.33e-22	85.9
MS.gene64327.t1	MTR_4g112460	31.655	139	92	1	3	138	10	148	1.38e-21	85.1
MS.gene64327.t1	MTR_4g115170	38.312	154	76	4	3	137	63	216	2.20e-21	85.9
MS.gene64327.t1	MTR_3g083470	32.143	140	84	2	1	139	90	219	2.50e-21	85.9
MS.gene64327.t1	MTR_8g078270	33.333	135	89	1	5	138	54	188	1.17e-20	83.2
MS.gene64327.t1	MTR_1g071150	33.088	136	91	0	4	139	12	147	7.03e-20	80.1
MS.gene64327.t1	MTR_1g046960	71.698	53	13	1	28	78	1	53	3.73e-19	77.0
MS.gene64327.t1	MTR_0168s0120	34.545	110	71	1	29	137	1	110	4.29e-19	77.4
MS.gene64327.t1	MTR_6g025320	34.545	110	71	1	29	137	1	110	4.29e-19	77.4
MS.gene64327.t1	MTR_3g051770	35.172	145	85	2	2	137	383	527	8.00e-18	79.0
MS.gene64327.t1	MTR_5g027000	32.283	127	85	1	9	134	27	153	8.32e-18	75.1
MS.gene64327.t1	MTR_7g115040	32.308	130	87	1	9	137	17	146	9.04e-18	74.7
MS.gene64327.t1	MTR_1g030440	34.459	148	80	3	3	139	21	162	3.38e-17	73.9
MS.gene64327.t1	MTR_4g132070	34.074	135	84	2	5	137	397	528	5.72e-17	76.6
MS.gene64327.t1	MTR_5g009830	35.036	137	80	4	5	137	372	503	6.94e-17	76.3
MS.gene64327.t1	MTR_8g069915	27.972	143	97	2	2	138	7	149	1.45e-16	72.0
MS.gene64327.t1	MTR_8g099095	33.333	135	85	2	5	137	372	503	1.48e-16	75.1
MS.gene64327.t1	MTR_5g089320	32.090	134	90	1	5	138	374	506	2.45e-16	74.7
MS.gene64327.t1	MTR_1g026190	31.852	135	87	2	5	137	388	519	3.20e-16	74.3
MS.gene64327.t1	MTR_5g092810	33.088	136	84	2	5	137	398	529	8.87e-16	73.2
MS.gene64327.t1	MTR_0028s0170	32.331	133	89	1	5	137	384	515	9.56e-16	72.8
MS.gene64327.t1	MTR_5g079470	54.839	62	27	1	7	68	13	73	2.41e-15	66.6
MS.gene64327.t1	MTR_6g007613	32.117	137	88	2	4	137	29	163	3.22e-15	68.6
MS.gene64327.t1	MTR_7g074020	31.387	137	89	2	4	137	30	164	4.06e-15	68.6
MS.gene64327.t1	MTR_7g068710	30.370	135	94	0	3	137	360	494	4.99e-15	70.9
MS.gene64327.t1	MTR_7g091890	32.558	129	87	0	9	137	368	496	1.60e-14	69.3
MS.gene64327.t1	MTR_3g088655	31.544	149	89	3	4	139	8	156	4.99e-14	65.5
MS.gene64327.t1	MTR_4g107490	31.343	134	90	2	5	137	379	511	5.60e-14	67.8
MS.gene64327.t1	MTR_5g011850	29.078	141	94	3	2	138	7	145	4.13e-13	62.8
MS.gene64327.t1	MTR_7g074020	30.579	121	79	2	4	121	30	148	2.90e-12	60.8
MS.gene64327.t1	MTR_6g007613	31.405	121	78	2	4	121	29	147	3.15e-12	60.5
MS.gene64327.t1	MTR_4g132040	30.882	136	87	2	5	137	401	532	3.17e-12	62.8
MS.gene64327.t1	MTR_4g066660	28.467	137	93	2	3	137	376	509	9.54e-12	61.6
MS.gene64327.t1	MTR_3g055570	27.206	136	85	1	4	139	52	173	1.28e-11	59.3
MS.gene64327.t1	MTR_3g098460	27.536	138	89	2	5	139	34	163	4.42e-11	59.7
MS.gene64327.t1	MTR_1g052530	30.233	129	90	0	9	137	362	490	6.87e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64327.t1	AT1G18210	50.000	136	65	1	3	138	22	154	7.56e-43	139
MS.gene64327.t1	AT1G18210	50.000	136	65	1	3	138	22	154	7.56e-43	139
MS.gene64327.t1	AT1G66400	48.951	143	64	2	3	139	14	153	1.67e-42	138
MS.gene64327.t1	AT1G73630	48.905	137	67	2	2	138	18	151	9.91e-42	136
MS.gene64327.t1	AT5G37770	48.227	141	68	1	3	138	16	156	9.61e-40	131
MS.gene64327.t1	AT5G37770	48.227	141	68	1	3	138	16	156	9.61e-40	131
MS.gene64327.t1	AT2G15680	44.118	136	75	1	3	138	49	183	3.54e-35	120
MS.gene64327.t1	AT1G24620	42.553	141	72	2	4	139	37	173	6.98e-35	119
MS.gene64327.t1	AT5G17470	44.526	137	73	1	5	138	3	139	3.62e-33	114
MS.gene64327.t1	AT3G07490	44.526	137	73	2	4	137	5	141	2.75e-31	109
MS.gene64327.t1	AT2G36180	44.776	134	70	1	8	137	4	137	1.28e-30	107
MS.gene64327.t1	AT1G05990	40.580	138	78	2	4	137	5	142	7.33e-30	105
MS.gene64327.t1	AT2G43290	39.437	142	78	2	4	137	65	206	7.76e-28	102
MS.gene64327.t1	AT3G10190	40.580	138	80	2	4	139	70	207	1.33e-27	101
MS.gene64327.t1	AT3G59440	38.971	136	81	1	4	137	51	186	2.37e-27	100
MS.gene64327.t1	AT4G12860	40.876	137	78	2	4	137	5	141	5.08e-27	98.6
MS.gene64327.t1	AT4G03290	36.429	140	83	2	4	137	5	144	2.14e-26	97.1
MS.gene64327.t1	AT5G37780	36.296	135	85	1	4	137	12	146	2.46e-26	97.1
MS.gene64327.t1	AT1G66410	36.296	135	85	1	4	137	12	146	2.46e-26	97.1
MS.gene64327.t1	AT5G21274	37.037	135	84	1	4	137	12	146	3.56e-26	96.7
MS.gene64327.t1	AT5G21274	43.478	69	36	1	73	138	6	74	9.38e-11	56.6
MS.gene64327.t1	AT3G03400	36.434	129	79	1	5	130	6	134	3.81e-26	95.9
MS.gene64327.t1	AT3G56800	36.296	135	85	1	4	137	12	146	7.68e-26	95.5
MS.gene64327.t1	AT3G56800	43.478	69	36	1	73	138	6	74	9.48e-11	56.6
MS.gene64327.t1	AT2G27030	36.296	135	85	1	4	137	12	146	7.68e-26	95.5
MS.gene64327.t1	AT2G27030	43.478	69	36	1	73	138	6	74	9.48e-11	56.6
MS.gene64327.t1	AT2G41110	36.296	135	85	1	4	137	12	146	7.68e-26	95.5
MS.gene64327.t1	AT2G41110	43.478	69	36	1	73	138	6	74	9.48e-11	56.6
MS.gene64327.t1	AT3G43810	36.296	135	85	1	4	137	12	146	8.11e-26	95.5
MS.gene64327.t1	AT3G43810	43.478	69	36	1	73	138	6	74	9.28e-11	56.6
MS.gene64327.t1	AT2G27030	36.296	135	85	1	4	137	12	146	2.91e-25	95.1
MS.gene64327.t1	AT3G43810	36.296	135	85	1	4	137	12	146	7.32e-25	94.7
MS.gene64327.t1	AT3G22930	35.766	137	87	1	4	139	35	171	9.19e-25	93.6
MS.gene64327.t1	AT4G14640	34.815	135	87	1	4	137	13	147	7.68e-23	87.8
MS.gene64327.t1	AT2G41110	33.333	147	85	2	4	137	12	158	1.01e-22	87.8
MS.gene64327.t1	AT2G41410	36.691	139	84	3	4	138	70	208	1.18e-22	89.4
MS.gene64327.t1	AT5G37780	32.667	150	85	2	4	137	12	161	3.54e-22	86.7
MS.gene64327.t1	AT4G37010	36.496	137	82	2	4	137	27	161	5.97e-22	86.3
MS.gene64327.t1	AT5G42380	35.252	139	84	2	3	137	48	184	6.49e-22	86.7
MS.gene64327.t1	AT4G37010	36.496	137	82	2	4	137	31	165	7.08e-22	85.9
MS.gene64327.t1	AT1G32250	29.577	142	93	1	3	137	15	156	2.07e-21	84.7
MS.gene64327.t1	AT1G18530	30.556	144	94	2	1	138	1	144	3.09e-21	84.0
MS.gene64327.t1	AT2G41100	33.987	153	83	2	4	138	66	218	4.87e-21	86.3
MS.gene64327.t1	AT2G41100	32.031	128	70	3	28	138	1	128	2.03e-12	63.2
MS.gene64327.t1	AT2G41100	33.987	153	83	2	4	138	66	218	4.87e-21	86.3
MS.gene64327.t1	AT2G41100	32.031	128	70	3	28	138	1	128	2.03e-12	63.2
MS.gene64327.t1	AT2G41100	33.987	153	83	2	4	138	66	218	4.87e-21	86.3
MS.gene64327.t1	AT2G41100	32.031	128	70	3	28	138	1	128	2.03e-12	63.2
MS.gene64327.t1	AT5G37780	34.711	121	78	1	18	137	13	133	4.89e-21	82.8
MS.gene64327.t1	AT3G50360	34.307	137	85	2	4	137	27	161	6.65e-21	83.6
MS.gene64327.t1	AT2G41100	33.987	153	83	2	4	138	101	253	7.44e-21	86.3
MS.gene64327.t1	AT2G41100	35.526	152	81	3	4	138	12	163	2.45e-20	85.1
MS.gene64327.t1	AT2G41100	33.987	153	83	2	4	138	101	253	7.44e-21	86.3
MS.gene64327.t1	AT2G41100	35.526	152	81	3	4	138	12	163	2.45e-20	85.1
MS.gene64327.t1	AT1G66410	34.711	121	78	1	18	137	36	156	8.44e-21	82.8
MS.gene64327.t1	AT5G37780	34.711	121	78	1	18	137	52	172	1.21e-20	82.8
MS.gene64327.t1	AT3G50770	32.639	144	89	3	3	139	63	205	1.63e-20	83.2
MS.gene64327.t1	AT1G76650	35.821	134	86	0	4	137	43	176	8.78e-20	80.9
MS.gene64327.t1	AT1G76650	35.821	134	86	0	4	137	43	176	8.78e-20	80.9
MS.gene64327.t1	AT1G66410	34.545	110	71	1	29	137	1	110	1.43e-19	78.6
MS.gene64327.t1	AT1G66410	34.545	110	71	1	29	137	1	110	1.43e-19	78.6
MS.gene64327.t1	AT4G04695	34.815	135	83	2	5	137	337	468	3.73e-19	82.8
MS.gene64327.t1	AT3G43810	34.545	110	71	1	29	137	1	110	4.50e-19	77.4
MS.gene64327.t1	AT3G43810	34.545	110	71	1	29	137	1	110	4.50e-19	77.4
MS.gene64327.t1	AT4G20780	33.766	154	81	3	5	137	30	183	8.04e-19	78.6
MS.gene64327.t1	AT2G41090	33.333	135	86	2	4	137	12	143	1.46e-18	77.8
MS.gene64327.t1	AT4G14640	33.058	121	80	1	18	137	9	129	2.86e-18	75.9
MS.gene64327.t1	AT4G23650	34.074	135	84	2	5	137	384	515	1.24e-17	78.6
MS.gene64327.t1	AT4G04700	33.333	135	85	2	5	137	337	468	1.53e-17	78.2
MS.gene64327.t1	AT3G51850	31.111	135	93	0	3	137	358	492	2.33e-17	77.8
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT4G04740	33.333	135	85	2	5	137	374	505	3.77e-17	77.0
MS.gene64327.t1	AT1G76640	34.586	133	84	1	8	137	26	158	4.42e-17	73.2
MS.gene64327.t1	AT1G76650	34.328	134	78	1	4	137	43	166	1.68e-16	72.0
MS.gene64327.t1	AT3G25600	27.536	138	97	1	4	138	12	149	2.29e-16	71.6
MS.gene64327.t1	AT5G17480	57.377	61	25	1	8	68	13	72	2.41e-16	69.3
MS.gene64327.t1	AT3G51920	30.000	140	94	2	2	137	7	146	2.59e-16	71.2
MS.gene64327.t1	AT3G03410	30.303	132	84	2	6	137	4	127	4.45e-16	70.1
MS.gene64327.t1	AT5G19360	33.083	133	88	1	5	137	374	505	6.77e-16	73.6
MS.gene64327.t1	AT1G74740	36.765	136	80	3	5	137	365	497	7.58e-16	73.2
MS.gene64327.t1	AT1G21550	32.000	150	81	4	3	137	9	152	9.14e-16	69.7
MS.gene64327.t1	AT4G04720	33.333	135	85	2	5	137	385	516	1.11e-15	72.8
MS.gene64327.t1	AT4G04720	33.333	135	85	2	5	137	385	516	1.11e-15	72.8
MS.gene64327.t1	AT3G03000	30.882	136	92	1	4	137	20	155	1.32e-15	69.7
MS.gene64327.t1	AT4G21940	32.593	135	86	2	5	137	407	538	1.62e-15	72.4
MS.gene64327.t1	AT4G21940	32.593	135	86	2	5	137	407	538	1.69e-15	72.4
MS.gene64327.t1	AT5G44460	34.459	148	80	4	5	137	29	174	3.03e-15	68.9
MS.gene64327.t1	AT3G20410	31.852	135	87	2	5	137	397	528	3.21e-15	71.6
MS.gene64327.t1	AT3G20410	31.852	135	87	2	5	137	397	528	3.21e-15	71.6
MS.gene64327.t1	AT1G61950	33.333	135	85	2	5	137	405	536	3.68e-15	71.2
MS.gene64327.t1	AT5G12180	32.331	133	89	1	5	137	379	510	4.27e-15	71.2
MS.gene64327.t1	AT1G50700	30.370	135	89	2	5	137	379	510	1.19e-14	69.7
MS.gene64327.t1	AT3G03430	52.459	61	28	1	8	68	13	72	1.70e-14	64.7
MS.gene64327.t1	AT3G01830	32.609	138	88	3	3	137	10	145	1.73e-14	66.2
MS.gene64327.t1	AT4G04710	33.333	135	85	2	5	137	338	469	3.35e-14	68.6
MS.gene64327.t1	AT4G04710	33.333	135	85	2	5	137	324	455	3.60e-14	68.6
MS.gene64327.t1	AT4G04710	33.333	135	85	2	5	137	351	482	4.06e-14	68.2
MS.gene64327.t1	AT1G18890	33.088	136	85	3	5	137	369	501	4.42e-14	68.2
MS.gene64327.t1	AT3G10660	28.571	133	93	1	5	137	492	622	1.14e-13	67.0
MS.gene64327.t1	AT3G10660	28.571	133	93	1	5	137	492	622	1.14e-13	67.0
MS.gene64327.t1	AT1G76040	30.370	135	89	2	5	137	179	310	4.56e-13	65.1
MS.gene64327.t1	AT1G76040	30.370	135	89	2	5	137	179	310	4.56e-13	65.1
MS.gene64327.t1	AT4G04710	32.847	137	85	3	5	137	351	484	5.32e-13	65.1
MS.gene64327.t1	AT2G41100	30.952	126	69	2	31	138	3	128	5.44e-13	63.5
MS.gene64327.t1	AT2G41860	28.571	133	95	0	5	137	360	492	5.92e-13	65.1
MS.gene64327.t1	AT2G41860	28.571	133	95	0	5	137	360	492	6.04e-13	65.1
MS.gene64327.t1	AT3G51850	32.632	95	64	0	3	97	358	452	6.28e-13	65.1
MS.gene64327.t1	AT1G76040	30.370	135	89	2	5	137	417	548	7.40e-13	64.7
MS.gene64327.t1	AT3G57530	30.597	134	90	2	5	137	369	500	9.91e-13	64.3
MS.gene64327.t1	AT1G62820	28.148	135	94	2	5	138	14	146	1.25e-12	61.6
MS.gene64327.t1	AT1G12310	28.369	141	95	3	2	138	8	146	2.59e-12	60.8
MS.gene64327.t1	AT5G12480	28.358	134	95	1	5	137	365	498	3.07e-12	63.2
MS.gene64327.t1	AT5G12480	28.358	134	95	1	5	137	271	404	3.15e-12	62.8
MS.gene64327.t1	AT3G22930	32.632	95	63	1	4	97	35	129	3.35e-12	60.1
MS.gene64327.t1	AT5G66210	29.078	141	87	5	4	137	369	503	7.01e-12	62.0
MS.gene64327.t1	AT5G66210	29.078	141	87	5	4	137	369	503	7.01e-12	62.0
MS.gene64327.t1	AT4G36070	28.873	142	88	5	3	137	377	512	1.01e-11	61.6
MS.gene64327.t1	AT4G36070	28.873	142	88	5	3	137	377	512	1.12e-11	61.2
MS.gene64327.t1	AT5G04870	30.147	136	87	4	5	137	456	586	3.06e-11	60.1

Find 25 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGAAATGCTTTCGACTTT+TGG	0.225845	1.3:-28754161	MS.gene64327:CDS
AGAACAATGTGCAGCTCTTC+GGG	0.339280	1.3:+28753957	None:intergenic
CACATTGTTCTTAATAAACT+TGG	0.356338	1.3:-28753945	MS.gene64327:CDS
GCGAAGTTCGTCGTCTGTTC+CGG	0.360892	1.3:+28754025	None:intergenic
AAGAACAATGTGCAGCTCTT+CGG	0.414475	1.3:+28753956	None:intergenic
CGACGTTGCTTATCATTCTC+TGG	0.416174	1.3:+28753898	None:intergenic
CATCTTTGTCGAGGTCGTAT+AGG	0.438174	1.3:+28753991	None:intergenic
CATTGCAATAATGCTGCTGC+CGG	0.489482	1.3:-28754044	MS.gene64327:CDS
AAGGATCTCTGTCTCGGAGT+TGG	0.498388	1.3:-28754183	MS.gene64327:CDS
AGTCATCTGAAGAAGTGAAA+AGG	0.509873	1.3:-28754130	MS.gene64327:CDS
TGAAGAAGTGAAAAGGATGA+TGG	0.512593	1.3:-28754123	MS.gene64327:CDS
CGGCAGCAGCATTATTGCAA+TGG	0.524608	1.3:+28754045	None:intergenic
CTATACGACCTCGACAAAGA+TGG	0.527093	1.3:-28753990	MS.gene64327:CDS
GTTGCGAACCTCGTCGTCCA+TGG	0.534868	1.3:+28754238	None:intergenic
AAGTTCGACAAGAACGGTGA+TGG	0.542287	1.3:-28754206	MS.gene64327:CDS
TGATGGAAAAGTTAACTTTG+AGG	0.561028	1.3:-28753865	MS.gene64327:CDS
TGATGGAAGGATCTCTGTCT+CGG	0.570707	1.3:-28754189	MS.gene64327:CDS
AACGTCGATGCAGACGGTGA+TGG	0.591121	1.3:-28753882	MS.gene64327:CDS
ATAAGCAACGTCGATGCAGA+CGG	0.591475	1.3:-28753888	MS.gene64327:CDS
ATGGAACATATTGATCAGAA+TGG	0.605173	1.3:-28754104	MS.gene64327:CDS
TCGACAAGAACGGTGATGGA+AGG	0.606124	1.3:-28754202	MS.gene64327:CDS
CATATTGATCAGAATGGTGA+CGG	0.608042	1.3:-28754098	MS.gene64327:CDS
TTCAACAAGTTCGACAAGAA+CGG	0.613960	1.3:-28754212	MS.gene64327:CDS
CAACTAGGCCATGGACGACG+AGG	0.655788	1.3:-28754246	None:intergenic
AGATGAAACCATCTTTGTCG+AGG	0.659084	1.3:+28753982	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CACATTGTTCTTAATAAACT+TGG	-	chr1.3:28754130-28754149	MS.gene64327:CDS	25.0%
	ATGGAACATATTGATCAGAA+TGG	-	chr1.3:28753971-28753990	MS.gene64327:CDS	30.0%
	TGATGGAAAAGTTAACTTTG+AGG	-	chr1.3:28754210-28754229	MS.gene64327:CDS	30.0%
	AGTCATCTGAAGAAGTGAAA+AGG	-	chr1.3:28753945-28753964	MS.gene64327:CDS	35.0%
	CATATTGATCAGAATGGTGA+CGG	-	chr1.3:28753977-28753996	MS.gene64327:CDS	35.0%
	TGAAGAAGTGAAAAGGATGA+TGG	-	chr1.3:28753952-28753971	MS.gene64327:CDS	35.0%
	TTCAACAAGTTCGACAAGAA+CGG	-	chr1.3:28753863-28753882	MS.gene64327:CDS	35.0%
!	CACTTCTTCAGATGACTTTT+TGG	+	chr1.3:28753942-28753961	None:intergenic	35.0%
!	GAAGAAATGCTTTCGACTTT+TGG	-	chr1.3:28753914-28753933	MS.gene64327:CDS	35.0%
	AAGAACAATGTGCAGCTCTT+CGG	+	chr1.3:28754122-28754141	None:intergenic	40.0%
	AGATGAAACCATCTTTGTCG+AGG	+	chr1.3:28754096-28754115	None:intergenic	40.0%
!	TGAGGCGTTCAAAAAGATGA+TGG	-	chr1.3:28754228-28754247	MS.gene64327:CDS	40.0%
	AAGTTCGACAAGAACGGTGA+TGG	-	chr1.3:28753869-28753888	MS.gene64327:CDS	45.0%
	AGAACAATGTGCAGCTCTTC+GGG	+	chr1.3:28754121-28754140	None:intergenic	45.0%
	ATAAGCAACGTCGATGCAGA+CGG	-	chr1.3:28754187-28754206	MS.gene64327:CDS	45.0%
	CATCTTTGTCGAGGTCGTAT+AGG	+	chr1.3:28754087-28754106	None:intergenic	45.0%
	CATTGCAATAATGCTGCTGC+CGG	-	chr1.3:28754031-28754050	MS.gene64327:CDS	45.0%
	CGACGTTGCTTATCATTCTC+TGG	+	chr1.3:28754180-28754199	None:intergenic	45.0%
	CTATACGACCTCGACAAAGA+TGG	-	chr1.3:28754085-28754104	MS.gene64327:CDS	45.0%
	TGATGGAAGGATCTCTGTCT+CGG	-	chr1.3:28753886-28753905	MS.gene64327:CDS	45.0%
	AAGGATCTCTGTCTCGGAGT+TGG	-	chr1.3:28753892-28753911	MS.gene64327:CDS	50.0%
	CGGCAGCAGCATTATTGCAA+TGG	+	chr1.3:28754033-28754052	None:intergenic	50.0%
!!	TCGACAAGAACGGTGATGGA+AGG	-	chr1.3:28753873-28753892	MS.gene64327:CDS	50.0%
	AACGTCGATGCAGACGGTGA+TGG	-	chr1.3:28754193-28754212	MS.gene64327:CDS	55.0%
	GCGAAGTTCGTCGTCTGTTC+CGG	+	chr1.3:28754053-28754072	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	28753839	28754258	28753839	ID=MS.gene64327
chr1.3	mRNA	28753839	28754258	28753839	ID=MS.gene64327.t1;Parent=MS.gene64327
chr1.3	exon	28753839	28754258	28753839	ID=MS.gene64327.t1.exon1;Parent=MS.gene64327.t1
chr1.3	CDS	28753839	28754258	28753839	ID=cds.MS.gene64327.t1;Parent=MS.gene64327.t1

Gene Sequence

>MS.gene64327

ATGGACGACGAGGTTCGCAACATCTTCAACAAGTTCGACAAGAACGGTGATGGAAGGATCTCTGTCTCGGAGTTGGAAGAAATGCTTTCGACTTTTGGATCCAAAAAGTCATCTGAAGAAGTGAAAAGGATGATGGAACATATTGATCAGAATGGTGACGGTTACATTGATCTCAAAGAATTAACTGATTTCCATTGCAATAATGCTGCTGCCGGAACAGACGACGAACTTCGCTATGCTTTCGACCTATACGACCTCGACAAAGATGGTTTCATCTCTCCCGAAGAGCTGCACATTGTTCTTAATAAACTTGGTGAGAAGTGCTCTCTGAGTGACTGCCAGAGAATGATAAGCAACGTCGATGCAGACGGTGATGGAAAAGTTAACTTTGAGGCGTTCAAAAAGATGATGGCTCTCTGA

Protein sequence

>MS.gene64327.t1

MDDEVRNIFNKFDKNGDGRISVSELEEMLSTFGSKKSSEEVKRMMEHIDQNGDGYIDLKELTDFHCNNAAAGTDDELRYAFDLYDLDKDGFISPEELHIVLNKLGEKCSLSDCQRMISNVDADGDGKVNFEAFKKMMAL