AlfalfaGEDB | MS.gene62258

M. sativa cultivar XinJiangDaYe / MS.gene62258

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62258.t1	XP_013460635.1	97.8	138	3	0	1	138	1	138	7.40E-43	183.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62258.t1	Q9LE22	45.9	135	73	0	4	138	22	156	2.7e-25	116.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62258.t1	I3SBS2	97.8	138	3	0	1	138	1	138	5.4e-43	183.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04915	MS.gene62258	0.857156	1.98E-62	-1.69E-46
MS.gene04917	MS.gene62258	0.855975	4.40E-62	-1.69E-46
MS.gene050759	MS.gene62258	0.821872	3.20E-53	-1.69E-46
MS.gene050826	MS.gene62258	0.8078	4.24E-50	-1.69E-46
MS.gene050962	MS.gene62258	0.811593	6.48E-51	-1.69E-46
MS.gene052464	MS.gene62258	0.801578	8.43E-49	-1.69E-46
MS.gene056480	MS.gene62258	0.820203	7.76E-53	-1.69E-46
MS.gene058429	MS.gene62258	0.811407	7.11E-51	-1.69E-46
MS.gene060259	MS.gene62258	0.834525	2.85E-56	-1.69E-46
MS.gene06052	MS.gene62258	0.855594	5.68E-62	-1.69E-46
MS.gene060932	MS.gene62258	0.821904	3.15E-53	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene62258	MS.gene35562	PPI
MS.gene62258	MS.gene67281	PPI
MS.gene62258	MS.gene92775	PPI
MS.gene64324	MS.gene62258	PPI
MS.gene62258	MS.gene27879	PPI
MS.gene62258	MS.gene21155	PPI
MS.gene62258	MS.gene53662	PPI
MS.gene62258	MS.gene63281	PPI
MS.gene62258	MS.gene060446	PPI
MS.gene62258	MS.gene062239	PPI
MS.gene62258	MS.gene013748	PPI
MS.gene62258	MS.gene97948	PPI
MS.gene62258	MS.gene21696	PPI
MS.gene62258	MS.gene64316	PPI
MS.gene62258	MS.gene29793	PPI
MS.gene62258	MS.gene98294	PPI
MS.gene62258	MS.gene05284	PPI
MS.gene62258	MS.gene22553	PPI
MS.gene62258	MS.gene53465	PPI
MS.gene62258	MS.gene03228	PPI
MS.gene62258	MS.gene000738	PPI
MS.gene62258	MS.gene04917	PPI
MS.gene038456	MS.gene62258	PPI
MS.gene62258	MS.gene46237	PPI
MS.gene62258	MS.gene64317	PPI
MS.gene62258	MS.gene46886	PPI
MS.gene62258	MS.gene025777	PPI
MS.gene004899	MS.gene62258	PPI
MS.gene62258	MS.gene040331	PPI
MS.gene62258	MS.gene022455	PPI
MS.gene62258	MS.gene038456	PPI
MS.gene62258	MS.gene63000	PPI
MS.gene62258	MS.gene93087	PPI
MS.gene62258	MS.gene64310	PPI
MS.gene62258	MS.gene046988	PPI
MS.gene62258	MS.gene057293	PPI
MS.gene62258	MS.gene71207	PPI
MS.gene62258	MS.gene74452	PPI
MS.gene62258	MS.gene09934	PPI
MS.gene62258	MS.gene54637	PPI
MS.gene62258	MS.gene58906	PPI
MS.gene62258	MS.gene79028	PPI
MS.gene62258	MS.gene004899	PPI
MS.gene62258	MS.gene68345	PPI
MS.gene62258	MS.gene49271	PPI
MS.gene62258	MS.gene003880	PPI
MS.gene62258	MS.gene053319	PPI
MS.gene62258	MS.gene008225	PPI
MS.gene68345	MS.gene62258	PPI
MS.gene62258	MS.gene000724	PPI
MS.gene62258	MS.gene65954	PPI
MS.gene62258	MS.gene98295	PPI
MS.gene62258	MS.gene022456	PPI
MS.gene62258	MS.gene001246	PPI
MS.gene62258	MS.gene074045	PPI
MS.gene62258	MS.gene041795	PPI
MS.gene62258	MS.gene85596	PPI
MS.gene62258	MS.gene96922	PPI
MS.gene62258	MS.gene64324	PPI
MS.gene62258	MS.gene55496	PPI
MS.gene62258	MS.gene025797	PPI
MS.gene62258	MS.gene056383	PPI
MS.gene62258	MS.gene27516	PPI
MS.gene62258	MS.gene64314	PPI
MS.gene62258	MS.gene040127	PPI
MS.gene62258	MS.gene94551	PPI
MS.gene62258	MS.gene62540	PPI
MS.gene62258	MS.gene074100	PPI
MS.gene62258	MS.gene53650	PPI
MS.gene62258	MS.gene02545	PPI
MS.gene62258	MS.gene04915	PPI
MS.gene58860	MS.gene62258	PPI
MS.gene62258	MS.gene61009	PPI
MS.gene62258	MS.gene35563	PPI
MS.gene62258	MS.gene057167	PPI
MS.gene62258	MS.gene64311	PPI
MS.gene62258	MS.gene49270	PPI
MS.gene04917	MS.gene62258	PPI
MS.gene62258	MS.gene027655	PPI
MS.gene62258	MS.gene026940	PPI
MS.gene62258	MS.gene024717	PPI
MS.gene62258	MS.gene64327	PPI
MS.gene62258	MS.gene29794	PPI
MS.gene62258	MS.gene28338	PPI
MS.gene62258	MS.gene71511	PPI
MS.gene62258	MS.gene21931	PPI
MS.gene62258	MS.gene001381	PPI
MS.gene62258	MS.gene033361	PPI
MS.gene62258	MS.gene87673	PPI
MS.gene62258	MS.gene53659	PPI
MS.gene62258	MS.gene09960	PPI
MS.gene62258	MS.gene44354	PPI
MS.gene62258	MS.gene011400	PPI
MS.gene62258	MS.gene036602	PPI
MS.gene62258	MS.gene061768	PPI
MS.gene62258	MS.gene89216	PPI
MS.gene62258	MS.gene64308	PPI
MS.gene62258	MS.gene009021	PPI
MS.gene62258	MS.gene47195	PPI
MS.gene62258	MS.gene47134	PPI
MS.gene62258	MS.gene017446	PPI
MS.gene62258	MS.gene80714	PPI
MS.gene62258	MS.gene96914	PPI
MS.gene62258	MS.gene96913	PPI
MS.gene62258	MS.gene07422	PPI
MS.gene62258	MS.gene023648	PPI
MS.gene97948	MS.gene62258	PPI
MS.gene003880	MS.gene62258	PPI
MS.gene54637	MS.gene62258	PPI
MS.gene62258	MS.gene93763	PPI
MS.gene62258	MS.gene64313	PPI
MS.gene62258	MS.gene061261	PPI
MS.gene62258	MS.gene64307	PPI
MS.gene46886	MS.gene62258	PPI
MS.gene62258	MS.gene036930	PPI
MS.gene62258	MS.gene21932	PPI
MS.gene62258	MS.gene026618	PPI
MS.gene62258	MS.gene58860	PPI
MS.gene62258	MS.gene065998	PPI
MS.gene62258	MS.gene53648	PPI
MS.gene62258	MS.gene015470	PPI
MS.gene62258	MS.gene008831	PPI
MS.gene62258	MS.gene55545	PPI
MS.gene62258	MS.gene056461	PPI
MS.gene62258	MS.gene29459	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62258.t1	MTR_3g067610	97.826	138	3	0	1	138	1	138	6.14e-96	272
MS.gene62258.t1	MTR_5g079340	71.739	138	36	1	3	137	2	139	5.74e-69	204
MS.gene62258.t1	MTR_1g046950	65.248	141	43	1	3	137	2	142	1.80e-63	191
MS.gene62258.t1	MTR_1g047100	63.309	139	46	1	3	136	2	140	7.30e-61	184
MS.gene62258.t1	MTR_5g008705	58.594	128	49	1	13	136	2	129	6.51e-49	153
MS.gene62258.t1	MTR_8g107110	55.072	138	59	1	2	136	21	158	1.08e-47	151
MS.gene62258.t1	MTR_1g032070	52.941	136	60	1	4	135	45	180	4.80e-45	145
MS.gene62258.t1	MTR_5g008695	60.000	115	40	1	29	137	1	115	1.13e-43	139
MS.gene62258.t1	MTR_8g105230	51.515	132	60	1	5	132	36	167	7.47e-43	140
MS.gene62258.t1	MTR_6g079570	52.143	140	61	3	2	136	23	161	2.83e-42	138
MS.gene62258.t1	MTR_4g067270	43.972	141	73	2	1	135	1	141	4.50e-35	119
MS.gene62258.t1	MTR_4g067270	45.070	71	37	1	2	70	75	145	5.21e-13	62.4
MS.gene62258.t1	MTR_7g089760	44.681	141	72	2	1	135	1	141	2.46e-34	117
MS.gene62258.t1	MTR_7g075040	45.139	144	66	4	5	135	47	190	5.36e-33	115
MS.gene62258.t1	MTR_8g036075	46.154	143	65	3	5	135	49	191	1.64e-32	114
MS.gene62258.t1	MTR_6g023460	43.511	131	71	1	8	135	11	141	1.02e-31	110
MS.gene62258.t1	MTR_4g086260	41.606	137	78	1	4	138	56	192	3.18e-31	110
MS.gene62258.t1	MTR_5g017510	40.146	137	78	2	3	135	46	182	4.23e-31	110
MS.gene62258.t1	MTR_5g017560	40.146	137	78	2	3	135	46	182	4.23e-31	110
MS.gene62258.t1	MTR_5g017550	38.971	136	80	1	3	135	46	181	5.40e-30	107
MS.gene62258.t1	MTR_3g089070	39.695	131	76	1	9	136	10	140	8.64e-29	102
MS.gene62258.t1	MTR_3g089090	39.695	131	76	1	9	136	9	139	9.07e-29	102
MS.gene62258.t1	MTR_7g087610	42.222	135	74	1	5	135	12	146	2.26e-28	102
MS.gene62258.t1	MTR_7g087610	43.750	64	36	0	74	137	12	75	1.02e-12	61.6
MS.gene62258.t1	MTR_7g087610	50.000	60	30	0	3	62	83	142	9.79e-11	56.6
MS.gene62258.t1	MTR_5g088320	42.963	135	73	1	5	135	12	146	2.64e-28	101
MS.gene62258.t1	MTR_5g088320	43.750	64	36	0	74	137	12	75	9.15e-13	61.6
MS.gene62258.t1	MTR_5g088320	50.000	60	30	0	3	62	83	142	6.71e-11	57.0
MS.gene62258.t1	MTR_6g025320	42.963	135	73	1	5	135	12	146	2.67e-28	101
MS.gene62258.t1	MTR_6g025320	43.750	64	36	0	74	137	12	75	8.96e-13	61.6
MS.gene62258.t1	MTR_6g025320	50.000	60	30	0	3	62	83	142	6.36e-11	57.0
MS.gene62258.t1	MTR_4g103650	41.045	134	76	1	5	135	2	135	3.78e-28	100
MS.gene62258.t1	MTR_1g076650	45.113	133	69	2	7	135	14	146	1.59e-27	99.8
MS.gene62258.t1	MTR_4g103630	40.299	134	77	1	5	135	6	139	2.15e-27	99.4
MS.gene62258.t1	MTR_4g103655	40.299	134	77	1	5	135	6	139	2.30e-27	99.0
MS.gene62258.t1	MTR_1g041285	44.444	135	71	2	5	135	12	146	2.73e-27	99.4
MS.gene62258.t1	MTR_7g090450	40.000	140	75	3	5	135	73	212	4.64e-27	100
MS.gene62258.t1	MTR_2g098890	38.462	143	80	2	1	135	60	202	7.63e-27	99.8
MS.gene62258.t1	MTR_8g078270	39.568	139	80	2	2	136	50	188	2.11e-25	95.5
MS.gene62258.t1	MTR_3g083470	37.956	137	71	2	3	135	91	217	4.09e-25	95.9
MS.gene62258.t1	MTR_4g115170	40.909	154	69	3	4	135	63	216	4.71e-24	92.8
MS.gene62258.t1	MTR_8g066630	34.043	141	86	2	5	138	17	157	5.59e-23	88.6
MS.gene62258.t1	MTR_8g066630	43.548	62	35	0	3	64	91	152	1.03e-11	59.3
MS.gene62258.t1	MTR_7g074240	36.986	146	76	2	6	135	25	170	1.59e-22	87.8
MS.gene62258.t1	MTR_4g112460	32.143	140	89	2	5	138	11	150	1.09e-21	85.5
MS.gene62258.t1	MTR_0168s0120	42.727	110	59	1	30	135	1	110	3.52e-21	82.4
MS.gene62258.t1	MTR_0168s0120	50.000	60	30	0	3	62	47	106	2.68e-11	57.0
MS.gene62258.t1	MTR_6g025320	42.727	110	59	1	30	135	1	110	3.52e-21	82.4
MS.gene62258.t1	MTR_6g025320	50.000	60	30	0	3	62	47	106	2.68e-11	57.0
MS.gene62258.t1	MTR_6g007613	36.691	139	84	2	4	138	28	166	5.65e-21	83.6
MS.gene62258.t1	MTR_5g027000	35.385	130	80	1	10	135	27	156	1.49e-20	82.4
MS.gene62258.t1	MTR_7g074020	35.971	139	85	2	4	138	29	167	2.09e-20	82.0
MS.gene62258.t1	MTR_7g074020	38.961	77	47	0	60	136	16	92	2.58e-12	61.2
MS.gene62258.t1	MTR_8g069915	30.769	143	87	2	5	138	12	151	2.85e-20	81.6
MS.gene62258.t1	MTR_1g071150	36.567	134	82	1	5	135	12	145	4.57e-20	80.9
MS.gene62258.t1	MTR_1g030440	33.103	145	77	3	5	135	22	160	2.47e-18	76.6
MS.gene62258.t1	MTR_5g009830	35.616	146	81	5	1	137	364	505	2.70e-17	77.4
MS.gene62258.t1	MTR_7g074020	35.772	123	75	2	4	122	29	151	2.97e-17	73.9
MS.gene62258.t1	MTR_7g074020	38.961	77	47	0	60	136	16	92	1.81e-12	61.2
MS.gene62258.t1	MTR_5g092810	36.765	136	76	4	6	135	398	529	3.55e-17	77.0
MS.gene62258.t1	MTR_8g099095	34.932	146	82	5	1	137	364	505	4.83e-17	76.6
MS.gene62258.t1	MTR_3g051770	35.374	147	83	4	1	135	381	527	9.34e-17	75.9
MS.gene62258.t1	MTR_6g007613	35.772	123	75	2	4	122	28	150	1.14e-16	72.0
MS.gene62258.t1	MTR_6g007613	42.188	64	37	0	73	136	28	91	6.67e-12	59.7
MS.gene62258.t1	MTR_3g088655	32.680	153	75	5	5	135	8	154	2.28e-16	71.2
MS.gene62258.t1	MTR_4g132070	34.722	144	81	5	1	135	389	528	3.84e-16	73.9
MS.gene62258.t1	MTR_0028s0170	31.469	143	91	4	1	137	376	517	8.01e-15	70.5
MS.gene62258.t1	MTR_5g089320	31.469	143	91	4	1	137	366	507	8.79e-15	70.1
MS.gene62258.t1	MTR_7g115040	35.556	135	83	1	5	135	12	146	1.12e-14	66.6
MS.gene62258.t1	MTR_5g079470	56.897	58	24	1	8	65	13	69	1.39e-14	64.7
MS.gene62258.t1	MTR_1g026190	29.927	137	88	4	6	137	388	521	3.45e-14	68.6
MS.gene62258.t1	MTR_8g043970	31.250	144	87	4	4	137	368	509	1.44e-13	66.6
MS.gene62258.t1	MTR_5g011850	29.104	134	89	2	6	135	13	144	1.66e-13	63.5
MS.gene62258.t1	MTR_3g055570	29.496	139	84	2	1	136	45	172	1.80e-13	64.3
MS.gene62258.t1	MTR_1g096490	31.724	145	87	5	1	137	328	468	6.31e-12	62.0
MS.gene62258.t1	MTR_4g107490	32.353	136	87	4	4	135	377	511	1.04e-11	61.2
MS.gene62258.t1	MTR_4g066660	32.090	134	83	3	7	135	379	509	1.05e-11	61.2
MS.gene62258.t1	MTR_3g055510	35.556	90	45	1	49	138	60	136	1.08e-11	58.9
MS.gene62258.t1	MTR_7g011010	35.000	120	66	4	19	135	87	197	1.09e-11	60.1
MS.gene62258.t1	MTR_7g068710	31.852	135	89	2	4	135	360	494	1.10e-11	61.2
MS.gene62258.t1	MTR_1g046960	44.068	59	28	1	29	82	1	59	1.27e-11	57.8
MS.gene62258.t1	MTR_5g025690	34.167	120	67	4	19	135	85	195	1.85e-11	59.3
MS.gene62258.t1	MTR_1g041150	30.345	145	89	5	1	137	416	556	2.55e-11	60.1
MS.gene62258.t1	MTR_3g098090	29.655	145	90	5	1	137	330	470	3.14e-11	60.1
MS.gene62258.t1	MTR_1g054865	31.690	142	87	5	1	135	459	597	4.09e-11	59.7
MS.gene62258.t1	MTR_3g098070	29.655	145	90	5	1	137	327	467	5.99e-11	59.3
MS.gene62258.t1	MTR_7g106710	31.034	145	88	5	1	137	433	573	6.07e-11	59.3
MS.gene62258.t1	MTR_7g091890	30.233	129	87	1	10	135	368	496	7.08e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62258.t1	AT1G18210	56.296	135	59	0	2	136	20	154	6.84e-52	162
MS.gene62258.t1	AT1G18210	56.296	135	59	0	2	136	20	154	6.84e-52	162
MS.gene62258.t1	AT5G37770	55.319	141	55	1	4	136	16	156	1.85e-49	155
MS.gene62258.t1	AT5G37770	55.319	141	55	1	4	136	16	156	1.85e-49	155
MS.gene62258.t1	AT1G73630	53.030	132	62	0	5	136	20	151	2.11e-48	153
MS.gene62258.t1	AT1G66400	53.623	138	58	1	4	135	14	151	7.03e-48	151
MS.gene62258.t1	AT1G24620	52.206	136	61	1	5	136	37	172	3.54e-45	145
MS.gene62258.t1	AT2G15680	47.015	134	69	1	5	136	50	183	9.17e-39	129
MS.gene62258.t1	AT5G17470	47.445	137	66	2	6	136	3	139	2.26e-36	122
MS.gene62258.t1	AT2G36180	48.551	138	64	3	8	138	3	140	6.49e-36	120
MS.gene62258.t1	AT1G05990	42.958	142	74	2	1	135	1	142	1.59e-34	117
MS.gene62258.t1	AT3G07490	43.972	141	73	2	1	135	1	141	3.20e-34	117
MS.gene62258.t1	AT4G03290	40.411	146	78	2	1	137	1	146	1.13e-31	110
MS.gene62258.t1	AT3G03400	41.045	134	73	2	1	128	1	134	1.32e-31	109
MS.gene62258.t1	AT2G43290	40.411	146	76	3	1	135	61	206	2.41e-31	111
MS.gene62258.t1	AT4G12860	41.844	141	76	2	1	135	1	141	2.05e-30	107
MS.gene62258.t1	AT3G10190	42.647	136	73	3	5	135	70	205	2.38e-30	108
MS.gene62258.t1	AT5G21274	43.704	135	72	1	5	135	12	146	1.04e-28	102
MS.gene62258.t1	AT5G21274	43.750	64	36	0	74	137	12	75	1.07e-12	61.6
MS.gene62258.t1	AT5G37780	44.444	135	71	2	5	135	12	146	1.25e-28	102
MS.gene62258.t1	AT5G37780	42.188	64	37	0	74	137	12	75	2.94e-12	60.5
MS.gene62258.t1	AT5G37780	50.000	60	30	0	3	62	83	142	7.40e-11	57.0
MS.gene62258.t1	AT1G66410	44.444	135	71	2	5	135	12	146	1.25e-28	102
MS.gene62258.t1	AT1G66410	42.188	64	37	0	74	137	12	75	2.94e-12	60.5
MS.gene62258.t1	AT1G66410	50.000	60	30	0	3	62	83	142	7.40e-11	57.0
MS.gene62258.t1	AT3G56800	42.963	135	73	1	5	135	12	146	1.85e-28	102
MS.gene62258.t1	AT3G56800	43.750	64	36	0	74	137	12	75	8.62e-13	62.0
MS.gene62258.t1	AT3G56800	50.000	60	30	0	3	62	83	142	4.52e-11	57.4
MS.gene62258.t1	AT2G27030	42.963	135	73	1	5	135	12	146	1.85e-28	102
MS.gene62258.t1	AT2G27030	43.750	64	36	0	74	137	12	75	8.62e-13	62.0
MS.gene62258.t1	AT2G27030	50.000	60	30	0	3	62	83	142	4.52e-11	57.4
MS.gene62258.t1	AT2G41110	42.963	135	73	1	5	135	12	146	1.85e-28	102
MS.gene62258.t1	AT2G41110	43.750	64	36	0	74	137	12	75	8.62e-13	62.0
MS.gene62258.t1	AT2G41110	50.000	60	30	0	3	62	83	142	4.52e-11	57.4
MS.gene62258.t1	AT3G59440	39.706	136	77	2	5	135	51	186	2.60e-28	103
MS.gene62258.t1	AT3G43810	42.963	135	73	1	5	135	12	146	2.79e-28	101
MS.gene62258.t1	AT3G43810	43.750	64	36	0	74	137	12	75	9.39e-13	61.6
MS.gene62258.t1	AT3G43810	50.000	60	30	0	3	62	83	142	6.67e-11	57.0
MS.gene62258.t1	AT2G27030	44.444	135	71	2	5	135	12	146	9.34e-28	101
MS.gene62258.t1	AT2G27030	43.750	64	36	0	74	137	12	75	3.93e-12	60.8
MS.gene62258.t1	AT2G27030	50.000	60	30	0	3	62	83	142	8.31e-11	57.4
MS.gene62258.t1	AT3G43810	42.963	135	73	1	5	135	12	146	1.34e-27	102
MS.gene62258.t1	AT3G43810	43.750	64	36	0	74	137	12	75	6.19e-12	60.8
MS.gene62258.t1	AT3G43810	50.000	60	30	0	3	62	83	142	7.56e-11	57.8
MS.gene62258.t1	AT3G22930	41.176	136	74	2	5	135	35	169	1.28e-26	98.2
MS.gene62258.t1	AT5G42380	40.441	136	76	2	5	135	49	184	3.37e-26	97.4
MS.gene62258.t1	AT3G50360	39.568	139	80	2	4	138	26	164	8.16e-26	96.3
MS.gene62258.t1	AT2G41410	39.855	138	76	3	5	135	70	207	2.09e-25	96.3
MS.gene62258.t1	AT4G14640	40.000	135	77	1	5	135	13	147	3.41e-25	94.0
MS.gene62258.t1	AT2G41110	39.456	147	73	2	5	135	12	158	3.52e-25	94.4
MS.gene62258.t1	AT2G41110	50.000	60	30	0	3	62	95	154	4.39e-11	57.8
MS.gene62258.t1	AT4G37010	39.130	138	80	2	5	138	27	164	8.53e-25	93.6
MS.gene62258.t1	AT4G37010	39.130	138	80	2	5	138	31	168	1.05e-24	93.2
MS.gene62258.t1	AT5G37780	40.000	150	71	3	5	135	12	161	2.16e-24	92.4
MS.gene62258.t1	AT5G37780	50.000	60	30	0	3	62	98	157	8.03e-11	57.0
MS.gene62258.t1	AT2G41100	37.908	153	74	2	5	136	66	218	2.24e-24	95.1
MS.gene62258.t1	AT2G41100	33.077	130	67	2	29	138	1	130	5.64e-14	67.4
MS.gene62258.t1	AT2G41100	37.908	153	74	2	5	136	66	218	2.24e-24	95.1
MS.gene62258.t1	AT2G41100	33.077	130	67	2	29	138	1	130	5.64e-14	67.4
MS.gene62258.t1	AT2G41100	37.908	153	74	2	5	136	66	218	2.24e-24	95.1
MS.gene62258.t1	AT2G41100	33.077	130	67	2	29	138	1	130	5.64e-14	67.4
MS.gene62258.t1	AT2G41100	37.908	153	74	2	5	136	101	253	3.49e-24	95.1
MS.gene62258.t1	AT2G41100	36.364	154	78	2	5	138	12	165	1.55e-22	90.9
MS.gene62258.t1	AT2G41100	37.908	153	74	2	5	136	101	253	3.49e-24	95.1
MS.gene62258.t1	AT2G41100	36.364	154	78	2	5	138	12	165	1.55e-22	90.9
MS.gene62258.t1	AT1G32250	32.450	151	89	3	1	138	9	159	3.43e-23	89.4
MS.gene62258.t1	AT1G66410	43.802	121	64	2	19	135	36	156	8.50e-23	88.2
MS.gene62258.t1	AT1G66410	50.000	60	30	0	3	62	93	152	7.78e-11	57.0
MS.gene62258.t1	AT5G37780	37.267	161	71	3	5	135	12	172	8.77e-23	88.6
MS.gene62258.t1	AT5G37780	43.802	121	64	2	19	135	13	133	9.36e-23	87.4
MS.gene62258.t1	AT5G37780	50.000	60	30	0	3	62	70	129	6.04e-11	56.6
MS.gene62258.t1	AT3G50770	34.965	143	84	3	3	136	62	204	2.93e-22	87.8
MS.gene62258.t1	AT1G66410	44.545	110	57	2	30	135	1	110	1.30e-21	83.6
MS.gene62258.t1	AT1G66410	50.000	60	30	0	3	62	47	106	2.81e-11	57.0
MS.gene62258.t1	AT1G66410	44.545	110	57	2	30	135	1	110	1.30e-21	83.6
MS.gene62258.t1	AT1G66410	50.000	60	30	0	3	62	47	106	2.81e-11	57.0
MS.gene62258.t1	AT3G43810	42.727	110	59	1	30	135	1	110	3.68e-21	82.4
MS.gene62258.t1	AT3G43810	50.000	60	30	0	3	62	47	106	2.81e-11	57.0
MS.gene62258.t1	AT3G43810	42.727	110	59	1	30	135	1	110	3.68e-21	82.4
MS.gene62258.t1	AT3G43810	50.000	60	30	0	3	62	47	106	2.81e-11	57.0
MS.gene62258.t1	AT1G18530	29.655	145	93	3	3	138	2	146	7.07e-21	83.2
MS.gene62258.t1	AT4G14640	38.843	121	70	1	19	135	9	129	3.20e-20	80.9
MS.gene62258.t1	AT2G41090	37.313	134	79	2	5	135	12	143	3.33e-20	82.0
MS.gene62258.t1	AT3G03410	34.109	129	80	1	7	135	4	127	1.16e-19	79.3
MS.gene62258.t1	AT1G76650	33.582	134	86	1	5	135	43	176	1.76e-19	80.1
MS.gene62258.t1	AT1G76650	33.582	134	86	1	5	135	43	176	1.76e-19	80.1
MS.gene62258.t1	AT4G20780	33.117	154	79	3	6	135	30	183	5.85e-19	79.0
MS.gene62258.t1	AT3G25600	29.167	144	90	2	4	138	11	151	6.61e-19	78.2
MS.gene62258.t1	AT3G25600	38.462	65	40	0	1	65	83	147	8.05e-11	57.0
MS.gene62258.t1	AT4G21940	36.364	143	80	5	1	135	399	538	9.87e-19	81.6
MS.gene62258.t1	AT4G21940	36.364	143	80	5	1	135	399	538	9.90e-19	81.6
MS.gene62258.t1	AT1G76640	34.307	137	84	1	5	135	22	158	1.35e-18	77.4
MS.gene62258.t1	AT3G20410	35.417	144	80	5	1	135	389	528	2.44e-18	80.5
MS.gene62258.t1	AT3G20410	35.417	144	80	5	1	135	389	528	2.44e-18	80.5
MS.gene62258.t1	AT4G04700	36.170	141	83	4	1	135	329	468	7.87e-18	79.0
MS.gene62258.t1	AT4G04695	35.664	143	81	5	1	135	329	468	8.67e-18	79.0
MS.gene62258.t1	AT1G50700	34.722	144	81	5	1	135	371	510	9.11e-18	79.0
MS.gene62258.t1	AT4G04720	36.806	144	78	5	1	135	377	516	9.62e-18	78.6
MS.gene62258.t1	AT4G04720	36.806	144	78	5	1	135	377	516	9.62e-18	78.6
MS.gene62258.t1	AT3G03000	31.655	139	90	1	5	138	20	158	9.94e-18	75.1
MS.gene62258.t1	AT3G03000	45.000	60	33	0	3	62	92	151	4.63e-12	60.5
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT4G04740	33.333	147	79	5	1	135	366	505	5.69e-17	76.6
MS.gene62258.t1	AT3G51920	32.394	142	85	3	3	135	7	146	6.97e-17	72.8
MS.gene62258.t1	AT4G23650	34.247	146	83	5	1	137	376	517	7.58e-17	76.3
MS.gene62258.t1	AT1G76650	32.090	134	78	2	5	135	43	166	1.95e-16	72.0
MS.gene62258.t1	AT5G19360	33.566	143	88	4	1	137	366	507	2.59e-16	74.7
MS.gene62258.t1	AT5G44460	30.822	146	85	2	6	135	29	174	2.69e-16	71.6
MS.gene62258.t1	AT5G12180	32.867	143	89	4	1	137	371	512	9.04e-16	73.2
MS.gene62258.t1	AT2G41100	35.156	128	62	2	30	136	1	128	2.13e-15	69.7
MS.gene62258.t1	AT1G61950	35.417	144	80	5	1	135	397	536	2.18e-15	72.0
MS.gene62258.t1	AT1G76040	34.932	146	82	5	1	137	171	312	5.87e-15	70.1
MS.gene62258.t1	AT1G76040	34.932	146	82	5	1	137	171	312	5.87e-15	70.1
MS.gene62258.t1	AT3G01830	32.609	138	85	4	4	135	10	145	7.39e-15	67.4
MS.gene62258.t1	AT1G76040	34.932	146	82	5	1	137	409	550	7.84e-15	70.5
MS.gene62258.t1	AT3G22930	38.542	96	53	2	5	95	35	129	1.17e-14	66.2
MS.gene62258.t1	AT3G51850	32.593	135	88	2	4	135	358	492	2.84e-14	68.9
MS.gene62258.t1	AT3G03430	56.364	55	23	1	8	62	12	65	5.57e-14	63.2
MS.gene62258.t1	AT1G21550	32.886	149	76	5	5	135	10	152	8.23e-14	64.7
MS.gene62258.t1	AT1G74740	36.232	138	79	5	4	135	363	497	9.63e-14	67.4
MS.gene62258.t1	AT5G17480	53.448	58	26	1	8	65	12	68	1.74e-13	62.0
MS.gene62258.t1	AT1G50700	29.412	170	81	6	1	135	371	536	3.74e-13	65.5
MS.gene62258.t1	AT1G12310	28.358	134	90	2	6	135	14	145	1.87e-12	60.8
MS.gene62258.t1	AT1G62820	28.358	134	90	2	6	135	14	145	1.93e-12	60.8
MS.gene62258.t1	AT1G18890	34.783	138	81	5	4	135	367	501	2.15e-12	63.5
MS.gene62258.t1	AT3G10660	31.034	145	88	5	1	137	484	624	2.43e-12	63.2
MS.gene62258.t1	AT3G10660	31.034	145	88	5	1	137	484	624	2.43e-12	63.2
MS.gene62258.t1	AT4G04710	32.639	144	84	5	1	135	316	455	3.70e-12	62.8
MS.gene62258.t1	AT4G14640	35.789	95	57	1	5	95	13	107	3.94e-12	59.7
MS.gene62258.t1	AT4G04710	32.639	144	84	5	1	135	330	469	4.14e-12	62.4
MS.gene62258.t1	AT4G04710	32.639	144	84	5	1	135	343	482	4.28e-12	62.4
MS.gene62258.t1	AT2G17890	28.000	150	85	4	1	135	408	549	9.96e-12	61.6
MS.gene62258.t1	AT3G57530	33.571	140	85	4	2	135	363	500	1.48e-11	60.8
MS.gene62258.t1	AT5G23580	30.769	143	91	4	1	137	320	460	2.38e-11	60.5
MS.gene62258.t1	AT5G04870	31.034	145	88	5	1	137	448	588	2.54e-11	60.5
MS.gene62258.t1	AT1G35670	32.414	145	86	6	1	137	324	464	2.87e-11	60.1
MS.gene62258.t1	AT5G66210	29.333	150	83	5	1	135	362	503	3.76e-11	59.7
MS.gene62258.t1	AT5G66210	29.333	150	83	5	1	135	362	503	3.76e-11	59.7
MS.gene62258.t1	AT4G09570	32.414	145	86	6	1	137	323	463	5.99e-11	59.3

Find 35 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGCGTTTGAGATGTATGATT+TGG	0.286754	3.2:-61818868	MS.gene62258:CDS
ACGCGGTGATGCGGCGGTTG+GGG	0.312328	3.2:-61818812	MS.gene62258:CDS
GGATAAGAATGGGTTGATTT+CGG	0.336138	3.2:-61818847	MS.gene62258:CDS
CACGCGGTGATGCGGCGGTT+GGG	0.340359	3.2:-61818813	MS.gene62258:CDS
TCACGCGGTGATGCGGCGGT+TGG	0.392880	3.2:-61818814	MS.gene62258:CDS
AATGCTCGCTTGGTGATTGC+CGG	0.406132	3.2:-61818785	MS.gene62258:CDS
TACATTGATCTGAAGGAGTT+CGG	0.439744	3.2:-61818933	MS.gene62258:CDS
GCGAACTTCTTCTTCATCCA+TGG	0.440189	3.2:+61819100	None:intergenic
CAACGTTTCCGATCATTCTC+CGG	0.490436	3.2:+61818766	None:intergenic
ATGTATGATTTGGATAAGAA+TGG	0.490586	3.2:-61818858	MS.gene62258:CDS
CGCGGTGATGCGGCGGTTGG+GGG	0.512194	3.2:-61818811	MS.gene62258:CDS
GATCTCACGCACGGAGCTGA+AGG	0.518260	3.2:-61819039	MS.gene62258:CDS
AGCTTCACGCGGTGATGCGG+CGG	0.542468	3.2:-61818818	MS.gene62258:CDS
GGTGATTGCCGGAGAATGAT+CGG	0.547645	3.2:-61818774	MS.gene62258:CDS
AAGGAGATGATGACGGCGCT+CGG	0.552092	3.2:-61819020	MS.gene62258:CDS
GTATGATGGAGGAGCTTGAT+CGG	0.560009	3.2:-61818968	MS.gene62258:CDS
GGAGGAAGTTACTCGTATGA+TGG	0.562010	3.2:-61818982	MS.gene62258:CDS
AACGTTGATGCTGATTCTGA+TGG	0.563183	3.2:-61818750	MS.gene62258:CDS
TGTATGATTTGGATAAGAAT+GGG	0.564743	3.2:-61818857	MS.gene62258:CDS
GAGCTTGATCGGAACGGCGA+CGG	0.575846	3.2:-61818957	MS.gene62258:CDS
AAGAGCTTCACGCGGTGATG+CGG	0.579875	3.2:-61818821	MS.gene62258:CDS
CGACGGTTACATTGATCTGA+AGG	0.591043	3.2:-61818940	MS.gene62258:CDS
ATGGAGGAGCTTGATCGGAA+CGG	0.618759	3.2:-61818963	MS.gene62258:CDS
CAACGGCGGTGGCGATACGA+AGG	0.619300	3.2:-61818901	MS.gene62258:CDS
GGAGAGTTACACAACGGCGG+TGG	0.624292	3.2:-61818912	MS.gene62258:CDS
GGAGCTGAAGGAGATGATGA+CGG	0.646065	3.2:-61819027	MS.gene62258:CDS
ACGTTGATGCTGATTCTGAT+GGG	0.647608	3.2:-61818749	MS.gene62258:CDS
CGACGGGAAGATCTCACGCA+CGG	0.655650	3.2:-61819048	MS.gene62258:CDS
GGAAGTTACTCGTATGATGG+AGG	0.655842	3.2:-61818979	MS.gene62258:CDS
CGATACGAAGGAGCTTAGAG+AGG	0.661467	3.2:-61818889	MS.gene62258:CDS
CGGTTCTAAAACAACGACGG+AGG	0.698833	3.2:-61819000	MS.gene62258:CDS
TTCGGAGAGTTACACAACGG+CGG	0.739454	3.2:-61818915	MS.gene62258:CDS
GCTCGGTTCTAAAACAACGA+CGG	0.739834	3.2:-61819003	MS.gene62258:CDS
GAGTTCGGAGAGTTACACAA+CGG	0.765134	3.2:-61818918	MS.gene62258:CDS
TTCGGCGAAAGAGCTTCACG+CGG	0.765302	3.2:-61818829	MS.gene62258:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCAACAAATTCGACAAAAA+CGG	-	chr3.2:61818731-61818750	MS.gene62258:CDS	25.0%
!!	ATGTATGATTTGGATAAGAA+TGG	-	chr3.2:61818944-61818963	MS.gene62258:CDS	25.0%
!!	TGTATGATTTGGATAAGAAT+GGG	-	chr3.2:61818945-61818964	MS.gene62258:CDS	25.0%
	TACATTGATCTGAAGGAGTT+CGG	-	chr3.2:61818869-61818888	MS.gene62258:CDS	35.0%
!!	GGATAAGAATGGGTTGATTT+CGG	-	chr3.2:61818955-61818974	MS.gene62258:CDS	35.0%
	AAATTCGACAAAAACGGCGA+CGG	-	chr3.2:61818737-61818756	MS.gene62258:CDS	40.0%
!	GGCGTTTGAGATGTATGATT+TGG	-	chr3.2:61818934-61818953	MS.gene62258:CDS	40.0%
!!	AACGTTGATGCTGATTCTGA+TGG	-	chr3.2:61819052-61819071	MS.gene62258:CDS	40.0%
!!	ACGTTGATGCTGATTCTGAT+GGG	-	chr3.2:61819053-61819072	MS.gene62258:CDS	40.0%
	AATTCGACAAAAACGGCGAC+GGG	-	chr3.2:61818738-61818757	MS.gene62258:CDS	45.0%
	CAACGTTTCCGATCATTCTC+CGG	+	chr3.2:61819039-61819058	None:intergenic	45.0%
	CGACGGTTACATTGATCTGA+AGG	-	chr3.2:61818862-61818881	MS.gene62258:CDS	45.0%
	GAGTTCGGAGAGTTACACAA+CGG	-	chr3.2:61818884-61818903	MS.gene62258:CDS	45.0%
	GGAAGTTACTCGTATGATGG+AGG	-	chr3.2:61818823-61818842	MS.gene62258:CDS	45.0%
	GGAGGAAGTTACTCGTATGA+TGG	-	chr3.2:61818820-61818839	MS.gene62258:CDS	45.0%
!	GTATGATGGAGGAGCTTGAT+CGG	-	chr3.2:61818834-61818853	MS.gene62258:CDS	45.0%
!!	GCTCGGTTCTAAAACAACGA+CGG	-	chr3.2:61818799-61818818	MS.gene62258:CDS	45.0%
	ATGGAGGAGCTTGATCGGAA+CGG	-	chr3.2:61818839-61818858	MS.gene62258:CDS	50.0%
	CGATACGAAGGAGCTTAGAG+AGG	-	chr3.2:61818913-61818932	MS.gene62258:CDS	50.0%
	GGAGCTGAAGGAGATGATGA+CGG	-	chr3.2:61818775-61818794	MS.gene62258:CDS	50.0%
	GGTGATTGCCGGAGAATGAT+CGG	-	chr3.2:61819028-61819047	MS.gene62258:CDS	50.0%
	TTCGGAGAGTTACACAACGG+CGG	-	chr3.2:61818887-61818906	MS.gene62258:CDS	50.0%
!	AATGCTCGCTTGGTGATTGC+CGG	-	chr3.2:61819017-61819036	MS.gene62258:CDS	50.0%
!!	CGGTTCTAAAACAACGACGG+AGG	-	chr3.2:61818802-61818821	MS.gene62258:CDS	50.0%
	AAGAGCTTCACGCGGTGATG+CGG	-	chr3.2:61818981-61819000	MS.gene62258:CDS	55.0%
	TTCGGCGAAAGAGCTTCACG+CGG	-	chr3.2:61818973-61818992	MS.gene62258:CDS	55.0%
	TTGGGGGAGAAATGCTCGCT+TGG	-	chr3.2:61819007-61819026	MS.gene62258:CDS	55.0%
!!	AAGGAGATGATGACGGCGCT+CGG	-	chr3.2:61818782-61818801	MS.gene62258:CDS	55.0%
	CGACGGGAAGATCTCACGCA+CGG	-	chr3.2:61818754-61818773	MS.gene62258:CDS	60.0%
	GAGCTTGATCGGAACGGCGA+CGG	-	chr3.2:61818845-61818864	MS.gene62258:CDS	60.0%
	GATCTCACGCACGGAGCTGA+AGG	-	chr3.2:61818763-61818782	MS.gene62258:CDS	60.0%
	GGAGAGTTACACAACGGCGG+TGG	-	chr3.2:61818890-61818909	MS.gene62258:CDS	60.0%
	AGCTTCACGCGGTGATGCGG+CGG	-	chr3.2:61818984-61819003	MS.gene62258:CDS	65.0%
	CAACGGCGGTGGCGATACGA+AGG	-	chr3.2:61818901-61818920	MS.gene62258:CDS	65.0%
	ACGCGGTGATGCGGCGGTTG+GGG	-	chr3.2:61818990-61819009	MS.gene62258:CDS	70.0%
	CACGCGGTGATGCGGCGGTT+GGG	-	chr3.2:61818989-61819008	MS.gene62258:CDS	70.0%
	TCACGCGGTGATGCGGCGGT+TGG	-	chr3.2:61818988-61819007	MS.gene62258:CDS	70.0%
	CGCGGTGATGCGGCGGTTGG+GGG	-	chr3.2:61818991-61819010	MS.gene62258:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	61818704	61819120	61818704	ID=MS.gene62258
chr3.2	mRNA	61818704	61819120	61818704	ID=MS.gene62258.t1;Parent=MS.gene62258
chr3.2	exon	61818704	61819120	61818704	ID=MS.gene62258.t1.exon1;Parent=MS.gene62258.t1
chr3.2	CDS	61818704	61819120	61818704	ID=cds.MS.gene62258.t1;Parent=MS.gene62258.t1

Gene Sequence

>MS.gene62258

ATGGATGAAGAAGAAGTTCGCAAGATCTTCAACAAATTCGACAAAAACGGCGACGGGAAGATCTCACGCACGGAGCTGAAGGAGATGATGACGGCGCTCGGTTCTAAAACAACGACGGAGGAAGTTACTCGTATGATGGAGGAGCTTGATCGGAACGGCGACGGTTACATTGATCTGAAGGAGTTCGGAGAGTTACACAACGGCGGTGGCGATACGAAGGAGCTTAGAGAGGCGTTTGAGATGTATGATTTGGATAAGAATGGGTTGATTTCGGCGAAAGAGCTTCACGCGGTGATGCGGCGGTTGGGGGAGAAATGCTCGCTTGGTGATTGCCGGAGAATGATCGGAAACGTTGATGCTGATTCTGATGGGAATGTGAATTTTGAAGAGTTTAAGAAGATGATGAGTCGCTCCTAA

Protein sequence

>MS.gene62258.t1

MDEEEVRKIFNKFDKNGDGKISRTELKEMMTALGSKTTTEEVTRMMEELDRNGDGYIDLKEFGELHNGGGDTKELREAFEMYDLDKNGLISAKELHAVMRRLGEKCSLGDCRRMIGNVDADSDGNVNFEEFKKMMSRS