AlfalfaGEDB | MS.gene53662

M. sativa cultivar XinJiangDaYe / MS.gene53662

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53662.t1	XP_013467196.1	61.3	142	52	1	1	139	1	142	2.10E-21	112.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53662.t1	Q9C9U8	57.7	137	55	1	2	138	18	151	3.2e-10	66.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53662.t1	A0A072VHE0	61.3	142	52	1	1	139	1	142	1.5e-21	112.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene68345	MS.gene53662	PPI
MS.gene53662	MS.gene026940	PPI
MS.gene53662	MS.gene000724	PPI
MS.gene53662	MS.gene65954	PPI
MS.gene001246	MS.gene53662	PPI
MS.gene53662	MS.gene98295	PPI
MS.gene53662	MS.gene053319	PPI
MS.gene040127	MS.gene53662	PPI
MS.gene62258	MS.gene53662	PPI
MS.gene53662	MS.gene28338	PPI
MS.gene038456	MS.gene53662	PPI
MS.gene000724	MS.gene53662	PPI
MS.gene53662	MS.gene025797	PPI
MS.gene53662	MS.gene21931	PPI
MS.gene53662	MS.gene53659	PPI
MS.gene64311	MS.gene53662	PPI
MS.gene53662	MS.gene09960	PPI
MS.gene53662	MS.gene061768	PPI
MS.gene040331	MS.gene53662	PPI
MS.gene53662	MS.gene62540	PPI
MS.gene53662	MS.gene47134	PPI
MS.gene53662	MS.gene017446	PPI
MS.gene53662	MS.gene80714	PPI
MS.gene53662	MS.gene53650	PPI
MS.gene53662	MS.gene96914	PPI
MS.gene58860	MS.gene53662	PPI
MS.gene53662	MS.gene02545	PPI
MS.gene53662	MS.gene96913	PPI
MS.gene27516	MS.gene53662	PPI
MS.gene053319	MS.gene53662	PPI
MS.gene04915	MS.gene53662	PPI
MS.gene61009	MS.gene53662	PPI
MS.gene64327	MS.gene53662	PPI
MS.gene074100	MS.gene53662	PPI
MS.gene64307	MS.gene53662	PPI
MS.gene53662	MS.gene057167	PPI
MS.gene53662	MS.gene93763	PPI
MS.gene53662	MS.gene64313	PPI
MS.gene04917	MS.gene53662	PPI
MS.gene53662	MS.gene49270	PPI
MS.gene53662	MS.gene024717	PPI
MS.gene036930	MS.gene53662	PPI
MS.gene53662	MS.gene29794	PPI
MS.gene53662	MS.gene008831	PPI
MS.gene53662	MS.gene71511	PPI
MS.gene53662	MS.gene001381	PPI
MS.gene53662	MS.gene033361	PPI
MS.gene53662	MS.gene87673	PPI
MS.gene53662	MS.gene44354	PPI
MS.gene53662	MS.gene036602	PPI
MS.gene27879	MS.gene53662	PPI
MS.gene53662	MS.gene89216	PPI
MS.gene011400	MS.gene53662	PPI
MS.gene53662	MS.gene35562	PPI
MS.gene53662	MS.gene64308	PPI
MS.gene53662	MS.gene009021	PPI
MS.gene53662	MS.gene47195	PPI
MS.gene024717	MS.gene53662	PPI
MS.gene64313	MS.gene53662	PPI
MS.gene53662	MS.gene060446	PPI
MS.gene53662	MS.gene07422	PPI
MS.gene53662	MS.gene023648	PPI
MS.gene97948	MS.gene53662	PPI
MS.gene53662	MS.gene013748	PPI
MS.gene55496	MS.gene53662	PPI
MS.gene003880	MS.gene53662	PPI
MS.gene54637	MS.gene53662	PPI
MS.gene000738	MS.gene53662	PPI
MS.gene49271	MS.gene53662	PPI
MS.gene67281	MS.gene53662	PPI
MS.gene53662	MS.gene64316	PPI
MS.gene53662	MS.gene98294	PPI
MS.gene53662	MS.gene061261	PPI
MS.gene062239	MS.gene53662	PPI
MS.gene46886	MS.gene53662	PPI
MS.gene53662	MS.gene03228	PPI
MS.gene53662	MS.gene036930	PPI
MS.gene53662	MS.gene026618	PPI
MS.gene53662	MS.gene065998	PPI
MS.gene53662	MS.gene53648	PPI
MS.gene21932	MS.gene53662	PPI
MS.gene28338	MS.gene53662	PPI
MS.gene53662	MS.gene55545	PPI
MS.gene008225	MS.gene53662	PPI
MS.gene027655	MS.gene53662	PPI
MS.gene53662	MS.gene056461	PPI
MS.gene53662	MS.gene63000	PPI
MS.gene53662	MS.gene64310	PPI
MS.gene056383	MS.gene53662	PPI
MS.gene53662	MS.gene29459	PPI
MS.gene64324	MS.gene53662	PPI
MS.gene53662	MS.gene71207	PPI
MS.gene53662	MS.gene92775	PPI
MS.gene022455	MS.gene53662	PPI
MS.gene53662	MS.gene74452	PPI
MS.gene015470	MS.gene53662	PPI
MS.gene53662	MS.gene21932	PPI
MS.gene22553	MS.gene53662	PPI
MS.gene53662	MS.gene63281	PPI
MS.gene35563	MS.gene53662	PPI
MS.gene53662	MS.gene21696	PPI
MS.gene53662	MS.gene29793	PPI
MS.gene53662	MS.gene022456	PPI
MS.gene53662	MS.gene05284	PPI
MS.gene53662	MS.gene53465	PPI
MS.gene53662	MS.gene074045	PPI
MS.gene53662	MS.gene85596	PPI
MS.gene53662	MS.gene96922	PPI
MS.gene53662	MS.gene46237	PPI
MS.gene21155	MS.gene53662	PPI
MS.gene53662	MS.gene64317	PPI
MS.gene004899	MS.gene53662	PPI
MS.gene53662	MS.gene64314	PPI
MS.gene53662	MS.gene025777	PPI
MS.gene53662	MS.gene94551	PPI
MS.gene53662	MS.gene93087	PPI
MS.gene53662	MS.gene046988	PPI
MS.gene53662	MS.gene074100	PPI
MS.gene53662	MS.gene057293	PPI
MS.gene53662	MS.gene04915	PPI
MS.gene53662	MS.gene09934	PPI
MS.gene05284	MS.gene53662	PPI
MS.gene041795	MS.gene53662	PPI
MS.gene53662	MS.gene58906	PPI
MS.gene53662	MS.gene79028	PPI
MS.gene53662	MS.gene64311	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53662.t1	MTR_1g046950	78.873	142	27	1	1	139	1	142	1.50e-76	223
MS.gene53662.t1	MTR_1g047100	79.286	140	27	1	1	138	1	140	8.12e-75	219
MS.gene53662.t1	MTR_5g079340	71.942	139	39	0	1	139	1	139	5.29e-68	202
MS.gene53662.t1	MTR_5g008705	75.000	128	31	1	12	138	2	129	6.35e-61	184
MS.gene53662.t1	MTR_3g067610	63.504	137	47	1	3	139	4	137	4.02e-60	182
MS.gene53662.t1	MTR_5g008695	73.913	115	27	1	28	139	1	115	1.79e-54	167
MS.gene53662.t1	MTR_6g079570	52.555	137	64	1	3	138	25	161	5.27e-45	145
MS.gene53662.t1	MTR_8g107110	52.593	135	64	0	3	137	23	157	1.37e-44	143
MS.gene53662.t1	MTR_1g032070	44.118	136	75	1	3	137	45	180	1.40e-36	124
MS.gene53662.t1	MTR_8g105230	41.045	134	74	2	4	134	36	167	1.25e-32	114
MS.gene53662.t1	MTR_4g067270	42.029	138	77	2	3	137	4	141	5.75e-31	108
MS.gene53662.t1	MTR_8g036075	45.455	143	69	3	4	137	49	191	6.28e-31	110
MS.gene53662.t1	MTR_7g089760	44.526	137	73	2	4	137	5	141	1.26e-30	107
MS.gene53662.t1	MTR_7g075040	43.243	148	72	4	1	137	44	190	1.56e-30	108
MS.gene53662.t1	MTR_6g023460	40.769	130	77	0	8	137	12	141	8.58e-29	102
MS.gene53662.t1	MTR_4g086260	39.416	137	82	1	3	139	56	191	4.52e-27	100
MS.gene53662.t1	MTR_3g089070	36.641	131	83	0	7	137	9	139	9.00e-26	95.1
MS.gene53662.t1	MTR_3g089090	36.641	131	83	0	7	137	8	138	9.15e-26	95.1
MS.gene53662.t1	MTR_1g041285	37.037	135	84	1	4	137	12	146	1.27e-25	95.1
MS.gene53662.t1	MTR_5g017550	34.815	135	88	0	3	137	47	181	2.89e-25	95.1
MS.gene53662.t1	MTR_5g088320	35.556	135	86	1	4	137	12	146	2.90e-25	94.0
MS.gene53662.t1	MTR_5g088320	42.188	64	37	0	76	139	12	75	4.77e-11	57.4
MS.gene53662.t1	MTR_7g087610	34.815	135	87	1	4	137	12	146	3.00e-25	94.0
MS.gene53662.t1	MTR_7g087610	42.857	70	37	1	73	139	6	75	2.51e-11	58.2
MS.gene53662.t1	MTR_6g025320	35.556	135	86	1	4	137	12	146	3.23e-25	94.0
MS.gene53662.t1	MTR_6g025320	42.857	70	37	1	73	139	6	75	4.25e-11	57.4
MS.gene53662.t1	MTR_7g090450	38.571	140	80	3	4	137	73	212	4.14e-25	95.5
MS.gene53662.t1	MTR_1g076650	36.842	133	83	1	6	137	14	146	4.35e-25	93.6
MS.gene53662.t1	MTR_5g017510	36.496	137	84	2	3	137	47	182	5.40e-25	94.4
MS.gene53662.t1	MTR_5g017560	36.496	137	84	2	3	137	47	182	5.40e-25	94.4
MS.gene53662.t1	MTR_4g103650	35.821	134	86	0	4	137	2	135	3.83e-24	90.9
MS.gene53662.t1	MTR_2g098890	37.143	140	83	2	3	137	63	202	4.19e-23	90.1
MS.gene53662.t1	MTR_4g103655	35.075	134	87	0	4	137	6	139	5.13e-23	88.2
MS.gene53662.t1	MTR_7g074240	38.356	146	77	3	5	137	25	170	6.31e-23	89.0
MS.gene53662.t1	MTR_4g103630	34.328	134	88	0	4	137	6	139	1.06e-22	87.4
MS.gene53662.t1	MTR_4g112460	31.429	140	93	1	3	139	10	149	8.34e-22	85.9
MS.gene53662.t1	MTR_8g066630	31.159	138	91	1	4	137	17	154	4.09e-21	84.0
MS.gene53662.t1	MTR_4g115170	37.662	154	77	4	3	137	63	216	1.04e-20	84.3
MS.gene53662.t1	MTR_3g083470	31.884	138	83	2	1	137	90	217	1.43e-20	84.0
MS.gene53662.t1	MTR_8g078270	32.593	135	90	1	5	138	54	188	4.15e-20	82.0
MS.gene53662.t1	MTR_1g046960	71.698	53	13	1	28	78	1	53	3.38e-19	77.4
MS.gene53662.t1	MTR_1g071150	32.090	134	91	0	4	137	12	145	1.02e-18	77.4
MS.gene53662.t1	MTR_0168s0120	33.636	110	72	1	29	137	1	110	2.24e-18	75.5
MS.gene53662.t1	MTR_6g025320	33.636	110	72	1	29	137	1	110	2.24e-18	75.5
MS.gene53662.t1	MTR_8g069915	28.472	144	97	2	2	139	7	150	1.09e-17	75.1
MS.gene53662.t1	MTR_1g030440	34.932	146	78	3	3	137	21	160	1.57e-17	74.7
MS.gene53662.t1	MTR_3g051770	34.483	145	86	2	2	137	383	527	2.42e-17	77.4
MS.gene53662.t1	MTR_7g115040	31.538	130	88	1	9	137	17	146	3.45e-17	73.2
MS.gene53662.t1	MTR_5g027000	31.496	127	86	1	9	134	27	153	5.06e-17	73.2
MS.gene53662.t1	MTR_6g007613	33.094	139	88	2	4	139	29	165	1.10e-16	72.4
MS.gene53662.t1	MTR_5g009830	32.847	137	87	2	5	139	372	505	2.18e-16	74.7
MS.gene53662.t1	MTR_4g132070	33.333	135	85	2	5	137	397	528	2.26e-16	74.7
MS.gene53662.t1	MTR_8g099095	32.117	137	88	2	5	139	372	505	4.77e-16	73.9
MS.gene53662.t1	MTR_5g089320	31.111	135	92	1	5	139	374	507	5.07e-16	73.9
MS.gene53662.t1	MTR_7g074020	32.117	137	88	2	4	137	30	164	5.41e-16	70.9
MS.gene53662.t1	MTR_1g026190	30.657	137	90	2	5	139	388	521	1.18e-15	72.8
MS.gene53662.t1	MTR_5g079470	55.738	61	26	1	8	68	14	73	2.23e-15	67.0
MS.gene53662.t1	MTR_0028s0170	31.111	135	92	1	5	139	384	517	3.27e-15	71.6
MS.gene53662.t1	MTR_5g092810	32.353	136	85	2	5	137	398	529	3.47e-15	71.2
MS.gene53662.t1	MTR_7g068710	29.630	135	95	0	3	137	360	494	1.41e-14	69.7
MS.gene53662.t1	MTR_3g088655	32.653	147	86	3	4	137	8	154	1.41e-14	66.6
MS.gene53662.t1	MTR_7g091890	31.783	129	88	0	9	137	368	496	5.25e-14	68.2
MS.gene53662.t1	MTR_5g011850	29.371	143	94	4	2	139	7	147	1.19e-13	63.9
MS.gene53662.t1	MTR_4g107490	30.597	134	91	2	5	137	379	511	1.47e-13	66.6
MS.gene53662.t1	MTR_6g007613	31.707	123	79	2	4	123	29	149	3.50e-13	63.2
MS.gene53662.t1	MTR_7g074020	30.894	123	80	2	4	123	30	150	3.83e-13	63.2
MS.gene53662.t1	MTR_8g043970	32.653	147	89	4	2	139	364	509	4.13e-12	62.4
MS.gene53662.t1	MTR_4g132040	30.147	136	88	2	5	137	401	532	1.27e-11	61.2
MS.gene53662.t1	MTR_4g066660	27.737	137	94	2	3	137	376	509	2.48e-11	60.5
MS.gene53662.t1	MTR_5g025690	44.615	65	34	1	75	137	131	195	3.39e-11	58.5
MS.gene53662.t1	MTR_7g011010	46.154	65	33	1	75	137	133	197	4.83e-11	58.2
MS.gene53662.t1	MTR_7g106710	29.771	131	90	1	9	139	445	573	7.95e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53662.t1	AT1G18210	49.265	136	66	1	3	138	22	154	2.77e-42	138
MS.gene53662.t1	AT1G18210	49.265	136	66	1	3	138	22	154	2.77e-42	138
MS.gene53662.t1	AT1G66400	48.936	141	63	2	3	137	14	151	1.23e-41	135
MS.gene53662.t1	AT1G73630	48.175	137	68	2	2	138	18	151	5.43e-41	134
MS.gene53662.t1	AT5G37770	47.518	141	69	1	3	138	16	156	2.86e-39	130
MS.gene53662.t1	AT5G37770	47.518	141	69	1	3	138	16	156	2.86e-39	130
MS.gene53662.t1	AT2G15680	43.382	136	76	1	3	138	49	183	1.39e-34	119
MS.gene53662.t1	AT1G24620	42.143	140	72	2	4	138	37	172	5.42e-34	117
MS.gene53662.t1	AT5G17470	43.796	137	74	1	5	138	3	139	1.32e-32	112
MS.gene53662.t1	AT3G07490	43.796	137	74	2	4	137	5	141	1.26e-30	107
MS.gene53662.t1	AT2G36180	44.030	134	71	1	8	137	4	137	3.69e-30	106
MS.gene53662.t1	AT1G05990	39.855	138	79	2	4	137	5	142	2.45e-29	104
MS.gene53662.t1	AT2G43290	40.559	143	75	3	4	137	65	206	2.91e-27	101
MS.gene53662.t1	AT3G10190	39.706	136	80	2	4	137	70	205	7.17e-27	99.8
MS.gene53662.t1	AT3G59440	38.235	136	82	1	4	137	51	186	1.12e-26	99.0
MS.gene53662.t1	AT4G12860	40.146	137	79	2	4	137	5	141	2.17e-26	97.1
MS.gene53662.t1	AT4G03290	35.211	142	86	2	4	139	5	146	5.15e-26	96.3
MS.gene53662.t1	AT5G37780	35.556	135	86	1	4	137	12	146	1.04e-25	95.1
MS.gene53662.t1	AT1G66410	35.556	135	86	1	4	137	12	146	1.04e-25	95.1
MS.gene53662.t1	AT5G21274	36.296	135	85	1	4	137	12	146	1.42e-25	95.1
MS.gene53662.t1	AT5G21274	42.857	70	37	1	73	139	6	75	4.22e-11	57.4
MS.gene53662.t1	AT3G03400	35.659	129	80	1	5	130	6	134	1.51e-25	94.4
MS.gene53662.t1	AT3G56800	35.556	135	86	1	4	137	12	146	3.07e-25	94.0
MS.gene53662.t1	AT3G56800	42.857	70	37	1	73	139	6	75	4.36e-11	57.4
MS.gene53662.t1	AT2G27030	35.556	135	86	1	4	137	12	146	3.07e-25	94.0
MS.gene53662.t1	AT2G27030	42.857	70	37	1	73	139	6	75	4.36e-11	57.4
MS.gene53662.t1	AT2G41110	35.556	135	86	1	4	137	12	146	3.07e-25	94.0
MS.gene53662.t1	AT2G41110	42.857	70	37	1	73	139	6	75	4.36e-11	57.4
MS.gene53662.t1	AT3G43810	35.556	135	86	1	4	137	12	146	3.39e-25	94.0
MS.gene53662.t1	AT3G43810	42.857	70	37	1	73	139	6	75	4.45e-11	57.4
MS.gene53662.t1	AT2G27030	35.556	135	86	1	4	137	12	146	8.53e-25	94.0
MS.gene53662.t1	AT2G27030	42.857	70	37	1	73	139	6	75	8.36e-11	57.4
MS.gene53662.t1	AT3G43810	35.556	135	86	1	4	137	12	146	2.62e-24	93.6
MS.gene53662.t1	AT3G22930	35.556	135	86	1	4	137	35	169	5.68e-24	91.7
MS.gene53662.t1	AT2G41410	37.410	139	83	3	4	138	70	208	1.48e-23	91.7
MS.gene53662.t1	AT5G42380	35.971	139	83	2	3	137	48	184	8.65e-23	89.0
MS.gene53662.t1	AT1G18530	31.034	145	94	2	1	139	1	145	1.86e-22	87.0
MS.gene53662.t1	AT4G14640	34.074	135	88	1	4	137	13	147	3.19e-22	86.3
MS.gene53662.t1	AT2G41110	32.653	147	86	2	4	137	12	158	4.26e-22	86.3
MS.gene53662.t1	AT4G37010	35.971	139	84	2	4	139	31	167	4.27e-22	86.7
MS.gene53662.t1	AT4G37010	35.971	139	84	2	4	139	27	163	4.42e-22	86.7
MS.gene53662.t1	AT5G37780	32.000	150	86	2	4	137	12	161	1.58e-21	85.1
MS.gene53662.t1	AT3G50360	33.813	139	87	2	4	139	27	163	4.98e-21	84.0
MS.gene53662.t1	AT1G76650	36.567	134	85	0	4	137	43	176	9.18e-21	83.2
MS.gene53662.t1	AT1G76650	36.567	134	85	0	4	137	43	176	9.18e-21	83.2
MS.gene53662.t1	AT1G32250	28.873	142	94	1	3	137	15	156	1.02e-20	82.8
MS.gene53662.t1	AT2G41100	33.333	153	84	2	4	138	66	218	1.77e-20	84.7
MS.gene53662.t1	AT2G41100	31.008	129	72	2	28	139	1	129	3.45e-12	62.4
MS.gene53662.t1	AT2G41100	33.333	153	84	2	4	138	66	218	1.77e-20	84.7
MS.gene53662.t1	AT2G41100	31.008	129	72	2	28	139	1	129	3.45e-12	62.4
MS.gene53662.t1	AT2G41100	33.333	153	84	2	4	138	66	218	1.77e-20	84.7
MS.gene53662.t1	AT2G41100	31.008	129	72	2	28	139	1	129	3.45e-12	62.4
MS.gene53662.t1	AT2G41100	33.333	153	84	2	4	138	101	253	2.52e-20	85.1
MS.gene53662.t1	AT2G41100	34.641	153	83	2	4	139	12	164	4.34e-20	84.3
MS.gene53662.t1	AT2G41100	33.333	153	84	2	4	138	101	253	2.52e-20	85.1
MS.gene53662.t1	AT2G41100	34.641	153	83	2	4	139	12	164	4.34e-20	84.3
MS.gene53662.t1	AT5G37780	33.884	121	79	1	18	137	13	133	2.66e-20	80.9
MS.gene53662.t1	AT1G66410	33.884	121	79	1	18	137	36	156	4.09e-20	81.3
MS.gene53662.t1	AT5G37780	33.884	121	79	1	18	137	52	172	6.36e-20	81.3
MS.gene53662.t1	AT3G50770	32.168	143	89	3	3	138	63	204	8.66e-20	81.6
MS.gene53662.t1	AT4G20780	34.416	154	80	3	5	137	30	183	1.28e-19	80.9
MS.gene53662.t1	AT1G66410	33.636	110	72	1	29	137	1	110	7.39e-19	76.6
MS.gene53662.t1	AT1G66410	33.636	110	72	1	29	137	1	110	7.39e-19	76.6
MS.gene53662.t1	AT4G04695	34.074	135	84	2	5	137	337	468	1.29e-18	81.3
MS.gene53662.t1	AT3G43810	33.636	110	72	1	29	137	1	110	2.35e-18	75.5
MS.gene53662.t1	AT3G43810	33.636	110	72	1	29	137	1	110	2.35e-18	75.5
MS.gene53662.t1	AT1G76640	35.338	133	83	1	8	137	26	158	5.67e-18	75.5
MS.gene53662.t1	AT2G41090	32.593	135	87	2	4	137	12	143	6.25e-18	76.3
MS.gene53662.t1	AT4G14640	32.231	121	81	1	18	137	9	129	1.36e-17	73.9
MS.gene53662.t1	AT1G76650	35.075	134	77	1	4	137	43	166	1.62e-17	74.7
MS.gene53662.t1	AT3G25600	28.058	139	97	1	4	139	12	150	2.14e-17	74.3
MS.gene53662.t1	AT4G23650	32.847	137	87	2	5	139	384	517	3.12e-17	77.4
MS.gene53662.t1	AT4G04700	32.593	135	86	2	5	137	337	468	5.63e-17	76.6
MS.gene53662.t1	AT3G51850	30.370	135	94	0	3	137	358	492	6.32e-17	76.3
MS.gene53662.t1	AT1G21550	32.886	149	79	4	4	137	10	152	1.41e-16	72.0
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT4G04740	32.593	135	86	2	5	137	374	505	1.60e-16	75.1
MS.gene53662.t1	AT5G17480	57.377	61	25	1	8	68	13	72	2.07e-16	69.7
MS.gene53662.t1	AT5G44460	35.135	148	79	4	5	137	29	174	3.65e-16	71.6
MS.gene53662.t1	AT3G51920	29.286	140	95	2	2	137	7	146	8.75e-16	69.7
MS.gene53662.t1	AT3G03410	29.545	132	85	2	6	137	4	127	1.64e-15	68.6
MS.gene53662.t1	AT3G01830	33.333	138	87	3	3	137	10	145	2.09e-15	68.6
MS.gene53662.t1	AT1G74740	36.029	136	81	3	5	137	365	497	2.38e-15	72.0
MS.gene53662.t1	AT5G19360	31.852	135	91	1	5	139	374	507	2.48e-15	72.0
MS.gene53662.t1	AT4G04720	32.593	135	86	2	5	137	385	516	4.57e-15	71.2
MS.gene53662.t1	AT4G04720	32.593	135	86	2	5	137	385	516	4.57e-15	71.2
MS.gene53662.t1	AT4G21940	31.852	135	87	2	5	137	407	538	5.77e-15	70.9
MS.gene53662.t1	AT3G03000	30.147	136	93	1	4	137	20	155	6.03e-15	67.8
MS.gene53662.t1	AT4G21940	31.852	135	87	2	5	137	407	538	6.78e-15	70.5
MS.gene53662.t1	AT4G04710	34.074	135	84	2	5	137	324	455	7.63e-15	70.5
MS.gene53662.t1	AT4G04710	34.074	135	84	2	5	137	351	482	8.13e-15	70.5
MS.gene53662.t1	AT4G04710	34.074	135	84	2	5	137	338	469	8.24e-15	70.5
MS.gene53662.t1	AT3G20410	31.111	135	88	2	5	137	397	528	1.11e-14	70.1
MS.gene53662.t1	AT3G20410	31.111	135	88	2	5	137	397	528	1.11e-14	70.1
MS.gene53662.t1	AT1G61950	32.593	135	86	2	5	137	405	536	1.37e-14	69.7
MS.gene53662.t1	AT3G03430	52.459	61	28	1	8	68	13	72	1.49e-14	64.7
MS.gene53662.t1	AT5G12180	31.111	135	92	1	5	139	379	512	1.50e-14	69.7
MS.gene53662.t1	AT1G50700	29.630	135	90	2	5	137	379	510	3.54e-14	68.6
MS.gene53662.t1	AT2G41860	29.323	133	94	0	5	137	360	492	8.73e-14	67.4
MS.gene53662.t1	AT2G41860	29.323	133	94	0	5	137	360	492	8.90e-14	67.4
MS.gene53662.t1	AT1G18890	32.353	136	86	3	5	137	369	501	9.12e-14	67.4
MS.gene53662.t1	AT4G04710	33.577	137	84	3	5	137	351	484	1.14e-13	67.0
MS.gene53662.t1	AT3G10660	27.407	135	96	1	5	139	492	624	3.20e-13	65.9
MS.gene53662.t1	AT3G10660	27.407	135	96	1	5	139	492	624	3.20e-13	65.9
MS.gene53662.t1	AT1G62820	28.467	137	94	3	5	139	14	148	3.89e-13	62.8
MS.gene53662.t1	AT3G51850	32.632	95	64	0	3	97	358	452	5.43e-13	65.1
MS.gene53662.t1	AT1G12310	28.671	143	95	4	2	139	8	148	7.26e-13	62.0
MS.gene53662.t1	AT1G76040	29.197	137	92	2	5	139	179	312	1.82e-12	63.2
MS.gene53662.t1	AT1G76040	29.197	137	92	2	5	139	179	312	1.82e-12	63.2
MS.gene53662.t1	AT2G41100	30.159	126	70	2	31	138	3	128	1.85e-12	62.0
MS.gene53662.t1	AT1G76040	29.197	137	92	2	5	139	417	550	2.27e-12	63.5
MS.gene53662.t1	AT3G57530	29.851	134	91	2	5	137	369	500	3.13e-12	62.8
MS.gene53662.t1	AT3G22930	32.632	95	63	1	4	97	35	129	3.42e-12	60.1
MS.gene53662.t1	AT5G12480	27.612	134	96	1	5	137	365	498	1.02e-11	61.6
MS.gene53662.t1	AT5G12480	27.612	134	96	1	5	137	271	404	1.10e-11	61.2
MS.gene53662.t1	AT2G31500	28.676	136	94	2	5	137	372	507	3.48e-11	60.1
MS.gene53662.t1	AT5G04870	28.986	138	90	4	5	139	456	588	6.56e-11	59.3

Find 25 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGAAATGCTTTCGACTTT+TGG	0.225845	1.1:-29976721	MS.gene53662:CDS
AGAACAATGTGCAGCTCTTC+GGG	0.339280	1.1:+29976517	None:intergenic
CACATTGTTCTTAATAAACT+TGG	0.356338	1.1:-29976505	MS.gene53662:CDS
GCGAAGTTCGTCGTCTGTTC+CGG	0.360892	1.1:+29976585	None:intergenic
AAGAACAATGTGCAGCTCTT+CGG	0.414475	1.1:+29976516	None:intergenic
CGACGTTGCTTATCATTCTC+TGG	0.416174	1.1:+29976458	None:intergenic
CGTCTTTGTCGAGGTCGTAT+AGG	0.438450	1.1:+29976551	None:intergenic
CATTGCAATAATGCTGCTGC+CGG	0.489482	1.1:-29976604	MS.gene53662:CDS
AAGGATCTCTGTCTCGGAGT+TGG	0.498388	1.1:-29976743	MS.gene53662:CDS
AGTCATCTGAAGAAGTGAAA+AGG	0.509873	1.1:-29976690	MS.gene53662:CDS
ATAAGCAACGTCGATGCAAA+CGG	0.511936	1.1:-29976448	MS.gene53662:CDS
TGAAGAAGTGAAAAGGATGA+TGG	0.512593	1.1:-29976683	MS.gene53662:CDS
CGGCAGCAGCATTATTGCAA+TGG	0.524608	1.1:+29976605	None:intergenic
GTTGCGAACCTCGTCGTCCA+TGG	0.534868	1.1:+29976798	None:intergenic
AAGTTCGACAAGAACGGTGA+TGG	0.542287	1.1:-29976766	MS.gene53662:CDS
AACGTCGATGCAAACGGTGA+TGG	0.547837	1.1:-29976442	MS.gene53662:CDS
TGATGGAAAAGTTAACTTTG+AGG	0.561028	1.1:-29976425	MS.gene53662:CDS
TGATGGAAGGATCTCTGTCT+CGG	0.570707	1.1:-29976749	MS.gene53662:CDS
AGATGAAACCGTCTTTGTCG+AGG	0.597470	1.1:+29976542	None:intergenic
TCGACAAGAACGGTGATGGA+AGG	0.606124	1.1:-29976762	MS.gene53662:CDS
CATATTGATCAGAACGGTGA+CGG	0.612307	1.1:-29976658	MS.gene53662:CDS
TTCAACAAGTTCGACAAGAA+CGG	0.613960	1.1:-29976772	MS.gene53662:CDS
CTATACGACCTCGACAAAGA+CGG	0.614035	1.1:-29976550	MS.gene53662:CDS
ATGGAACATATTGATCAGAA+CGG	0.652515	1.1:-29976664	MS.gene53662:CDS
CAACTAGGCCATGGACGACG+AGG	0.655788	1.1:-29976806	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CACATTGTTCTTAATAAACT+TGG	-	chr1.1:29976690-29976709	MS.gene53662:CDS	25.0%
	ATGGAACATATTGATCAGAA+CGG	-	chr1.1:29976531-29976550	MS.gene53662:CDS	30.0%
	TGATGGAAAAGTTAACTTTG+AGG	-	chr1.1:29976770-29976789	MS.gene53662:CDS	30.0%
	AGTCATCTGAAGAAGTGAAA+AGG	-	chr1.1:29976505-29976524	MS.gene53662:CDS	35.0%
	TGAAGAAGTGAAAAGGATGA+TGG	-	chr1.1:29976512-29976531	MS.gene53662:CDS	35.0%
	TTCAACAAGTTCGACAAGAA+CGG	-	chr1.1:29976423-29976442	MS.gene53662:CDS	35.0%
!	CACTTCTTCAGATGACTTTT+TGG	+	chr1.1:29976502-29976521	None:intergenic	35.0%
!	GAAGAAATGCTTTCGACTTT+TGG	-	chr1.1:29976474-29976493	MS.gene53662:CDS	35.0%
	AAGAACAATGTGCAGCTCTT+CGG	+	chr1.1:29976682-29976701	None:intergenic	40.0%
	ATAAGCAACGTCGATGCAAA+CGG	-	chr1.1:29976747-29976766	MS.gene53662:CDS	40.0%
	CATATTGATCAGAACGGTGA+CGG	-	chr1.1:29976537-29976556	MS.gene53662:CDS	40.0%
!	TGAGGCGTTCAAAAAGATGA+TGG	-	chr1.1:29976788-29976807	MS.gene53662:CDS	40.0%
	AAGTTCGACAAGAACGGTGA+TGG	-	chr1.1:29976429-29976448	MS.gene53662:CDS	45.0%
	AGAACAATGTGCAGCTCTTC+GGG	+	chr1.1:29976681-29976700	None:intergenic	45.0%
	AGATGAAACCGTCTTTGTCG+AGG	+	chr1.1:29976656-29976675	None:intergenic	45.0%
	CATTGCAATAATGCTGCTGC+CGG	-	chr1.1:29976591-29976610	MS.gene53662:CDS	45.0%
	CGACGTTGCTTATCATTCTC+TGG	+	chr1.1:29976740-29976759	None:intergenic	45.0%
	CTATACGACCTCGACAAAGA+CGG	-	chr1.1:29976645-29976664	MS.gene53662:CDS	45.0%
	TGATGGAAGGATCTCTGTCT+CGG	-	chr1.1:29976446-29976465	MS.gene53662:CDS	45.0%
	AACGTCGATGCAAACGGTGA+TGG	-	chr1.1:29976753-29976772	MS.gene53662:CDS	50.0%
	AAGGATCTCTGTCTCGGAGT+TGG	-	chr1.1:29976452-29976471	MS.gene53662:CDS	50.0%
	CGGCAGCAGCATTATTGCAA+TGG	+	chr1.1:29976593-29976612	None:intergenic	50.0%
	CGTCTTTGTCGAGGTCGTAT+AGG	+	chr1.1:29976647-29976666	None:intergenic	50.0%
!!	TCGACAAGAACGGTGATGGA+AGG	-	chr1.1:29976433-29976452	MS.gene53662:CDS	50.0%
	GCGAAGTTCGTCGTCTGTTC+CGG	+	chr1.1:29976613-29976632	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	29976399	29976818	29976399	ID=MS.gene53662
chr1.1	mRNA	29976399	29976818	29976399	ID=MS.gene53662.t1;Parent=MS.gene53662
chr1.1	exon	29976399	29976818	29976399	ID=MS.gene53662.t1.exon1;Parent=MS.gene53662.t1
chr1.1	CDS	29976399	29976818	29976399	ID=cds.MS.gene53662.t1;Parent=MS.gene53662.t1

Gene Sequence

>MS.gene53662

ATGGACGACGAGGTTCGCAACATCTTCAACAAGTTCGACAAGAACGGTGATGGAAGGATCTCTGTCTCGGAGTTGGAAGAAATGCTTTCGACTTTTGGATCCAAAAAGTCATCTGAAGAAGTGAAAAGGATGATGGAACATATTGATCAGAACGGTGACGGTTACATTGATCTCAAAGAATTAACTGATTTCCATTGCAATAATGCTGCTGCCGGAACAGACGACGAACTTCGCTATGCTTTCGACCTATACGACCTCGACAAAGACGGTTTCATCTCTCCCGAAGAGCTGCACATTGTTCTTAATAAACTTGGTGAGAAGTGCTCTCTGAGTGACTGCCAGAGAATGATAAGCAACGTCGATGCAAACGGTGATGGAAAAGTTAACTTTGAGGCGTTCAAAAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene53662.t1

MDDEVRNIFNKFDKNGDGRISVSELEEMLSTFGSKKSSEEVKRMMEHIDQNGDGYIDLKELTDFHCNNAAAGTDDELRYAFDLYDLDKDGFISPEELHIVLNKLGEKCSLSDCQRMISNVDANGDGKVNFEAFKKMMAR