AlfalfaGEDB | MS.gene061768

M. sativa cultivar XinJiangDaYe / MS.gene061768

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061768.t1	XP_013467196.1	85.9	142	20	0	1	142	1	142	5.70E-46	193.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061768.t1	Q9LE22	47.8	138	66	1	3	140	22	153	1.1e-26	120.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061768.t1	A0A072VHE0	85.9	142	20	0	1	142	1	142	4.1e-46	193.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene013748	MS.gene061768	PPI
MS.gene061768	MS.gene80714	PPI
MS.gene28338	MS.gene061768	PPI
MS.gene85596	MS.gene061768	PPI
MS.gene65954	MS.gene061768	PPI
MS.gene008225	MS.gene061768	PPI
MS.gene061768	MS.gene057167	PPI
MS.gene061768	MS.gene93763	PPI
MS.gene64324	MS.gene061768	PPI
MS.gene011400	MS.gene061768	PPI
MS.gene057167	MS.gene061768	PPI
MS.gene015470	MS.gene061768	PPI
MS.gene09960	MS.gene061768	PPI
MS.gene024717	MS.gene061768	PPI
MS.gene056461	MS.gene061768	PPI
MS.gene64308	MS.gene061768	PPI
MS.gene53662	MS.gene061768	PPI
MS.gene93087	MS.gene061768	PPI
MS.gene35563	MS.gene061768	PPI
MS.gene55496	MS.gene061768	PPI
MS.gene003880	MS.gene061768	PPI
MS.gene54637	MS.gene061768	PPI
MS.gene49271	MS.gene061768	PPI
MS.gene67281	MS.gene061768	PPI
MS.gene62540	MS.gene061768	PPI
MS.gene061768	MS.gene71511	PPI
MS.gene025777	MS.gene061768	PPI
MS.gene022456	MS.gene061768	PPI
MS.gene061768	MS.gene056461	PPI
MS.gene062239	MS.gene061768	PPI
MS.gene46886	MS.gene061768	PPI
MS.gene026940	MS.gene061768	PPI
MS.gene061768	MS.gene35562	PPI
MS.gene21155	MS.gene061768	PPI
MS.gene71207	MS.gene061768	PPI
MS.gene92775	MS.gene061768	PPI
MS.gene023648	MS.gene061768	PPI
MS.gene07422	MS.gene061768	PPI
MS.gene03228	MS.gene061768	PPI
MS.gene09934	MS.gene061768	PPI
MS.gene96922	MS.gene061768	PPI
MS.gene21932	MS.gene061768	PPI
MS.gene94551	MS.gene061768	PPI
MS.gene027655	MS.gene061768	PPI
MS.gene47134	MS.gene061768	PPI
MS.gene056383	MS.gene061768	PPI
MS.gene022455	MS.gene061768	PPI
MS.gene05284	MS.gene061768	PPI
MS.gene041795	MS.gene061768	PPI
MS.gene046988	MS.gene061768	PPI
MS.gene63000	MS.gene061768	PPI
MS.gene22553	MS.gene061768	PPI
MS.gene061768	MS.gene64317	PPI
MS.gene057293	MS.gene061768	PPI
MS.gene96914	MS.gene061768	PPI
MS.gene53648	MS.gene061768	PPI
MS.gene017446	MS.gene061768	PPI
MS.gene44354	MS.gene061768	PPI
MS.gene033361	MS.gene061768	PPI
MS.gene061768	MS.gene29459	PPI
MS.gene53659	MS.gene061768	PPI
MS.gene038456	MS.gene061768	PPI
MS.gene060446	MS.gene061768	PPI
MS.gene004899	MS.gene061768	PPI
MS.gene036602	MS.gene061768	PPI
MS.gene008831	MS.gene061768	PPI
MS.gene009021	MS.gene061768	PPI
MS.gene46237	MS.gene061768	PPI
MS.gene061768	MS.gene21696	PPI
MS.gene87673	MS.gene061768	PPI
MS.gene98295	MS.gene061768	PPI
MS.gene29793	MS.gene061768	PPI
MS.gene21931	MS.gene061768	PPI
MS.gene074100	MS.gene061768	PPI
MS.gene025797	MS.gene061768	PPI
MS.gene065998	MS.gene061768	PPI
MS.gene001381	MS.gene061768	PPI
MS.gene061768	MS.gene64314	PPI
MS.gene64316	MS.gene061768	PPI
MS.gene63281	MS.gene061768	PPI
MS.gene29794	MS.gene061768	PPI
MS.gene074045	MS.gene061768	PPI
MS.gene68345	MS.gene061768	PPI
MS.gene89216	MS.gene061768	PPI
MS.gene001246	MS.gene061768	PPI
MS.gene040127	MS.gene061768	PPI
MS.gene62258	MS.gene061768	PPI
MS.gene64310	MS.gene061768	PPI
MS.gene55545	MS.gene061768	PPI
MS.gene061768	MS.gene53650	PPI
MS.gene000724	MS.gene061768	PPI
MS.gene74452	MS.gene061768	PPI
MS.gene64311	MS.gene061768	PPI
MS.gene061768	MS.gene79028	PPI
MS.gene27879	MS.gene061768	PPI
MS.gene96913	MS.gene061768	PPI
MS.gene040331	MS.gene061768	PPI
MS.gene58906	MS.gene061768	PPI
MS.gene58860	MS.gene061768	PPI
MS.gene64313	MS.gene061768	PPI
MS.gene98294	MS.gene061768	PPI
MS.gene27516	MS.gene061768	PPI
MS.gene02545	MS.gene061768	PPI
MS.gene053319	MS.gene061768	PPI
MS.gene04915	MS.gene061768	PPI
MS.gene49270	MS.gene061768	PPI
MS.gene97948	MS.gene061768	PPI
MS.gene61009	MS.gene061768	PPI
MS.gene64327	MS.gene061768	PPI
MS.gene000738	MS.gene061768	PPI
MS.gene64307	MS.gene061768	PPI
MS.gene53465	MS.gene061768	PPI
MS.gene061261	MS.gene061768	PPI
MS.gene026618	MS.gene061768	PPI
MS.gene04917	MS.gene061768	PPI
MS.gene47195	MS.gene061768	PPI
MS.gene036930	MS.gene061768	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061768.t1	MTR_1g047100	83.688	141	22	1	1	141	1	140	1.50e-80	234
MS.gene061768.t1	MTR_1g046950	83.099	142	24	0	1	142	1	142	8.47e-80	232
MS.gene061768.t1	MTR_5g079340	72.222	144	33	2	1	142	1	139	9.97e-68	201
MS.gene061768.t1	MTR_3g067610	63.571	140	45	1	3	142	4	137	1.98e-62	188
MS.gene061768.t1	MTR_5g008705	73.846	130	32	1	12	141	2	129	2.78e-61	184
MS.gene061768.t1	MTR_5g008695	74.783	115	29	0	28	142	1	115	1.61e-57	174
MS.gene061768.t1	MTR_8g107110	57.246	138	56	1	3	140	23	157	2.65e-50	158
MS.gene061768.t1	MTR_6g079570	55.714	140	58	2	3	141	25	161	1.92e-49	156
MS.gene061768.t1	MTR_1g032070	47.826	138	70	1	3	140	45	180	6.59e-41	135
MS.gene061768.t1	MTR_8g105230	43.284	134	74	1	4	137	36	167	1.07e-34	119
MS.gene061768.t1	MTR_4g067270	43.571	140	75	2	3	140	4	141	1.41e-34	117
MS.gene061768.t1	MTR_8g036075	48.611	144	66	4	4	140	49	191	4.38e-34	118
MS.gene061768.t1	MTR_7g075040	44.218	147	75	3	1	140	44	190	1.40e-33	116
MS.gene061768.t1	MTR_6g023460	43.066	137	67	2	8	140	12	141	4.73e-32	111
MS.gene061768.t1	MTR_7g089760	45.324	139	72	2	4	140	5	141	6.20e-32	111
MS.gene061768.t1	MTR_4g086260	40.714	140	79	1	3	142	56	191	1.02e-29	107
MS.gene061768.t1	MTR_1g076650	41.481	135	77	1	6	140	14	146	3.79e-29	103
MS.gene061768.t1	MTR_1g076650	44.595	74	38	1	72	142	2	75	2.66e-11	58.2
MS.gene061768.t1	MTR_7g090450	39.286	140	82	3	4	140	73	212	6.32e-29	105
MS.gene061768.t1	MTR_1g041285	40.876	137	79	1	4	140	12	146	9.96e-29	103
MS.gene061768.t1	MTR_1g041285	43.750	64	36	0	79	142	12	75	8.98e-11	56.6
MS.gene061768.t1	MTR_6g025320	39.416	137	81	1	4	140	12	146	1.00e-28	103
MS.gene061768.t1	MTR_6g025320	46.875	64	34	0	79	142	12	75	1.23e-13	64.3
MS.gene061768.t1	MTR_5g017510	41.429	140	76	3	3	140	47	182	1.15e-28	103
MS.gene061768.t1	MTR_5g017510	39.437	71	43	0	2	72	119	189	6.74e-11	57.8
MS.gene061768.t1	MTR_5g017560	41.429	140	76	3	3	140	47	182	1.15e-28	103
MS.gene061768.t1	MTR_5g017560	39.437	71	43	0	2	72	119	189	6.74e-11	57.8
MS.gene061768.t1	MTR_5g088320	39.416	137	81	1	4	140	12	146	1.20e-28	102
MS.gene061768.t1	MTR_5g088320	46.875	64	34	0	79	142	12	75	1.27e-13	64.3
MS.gene061768.t1	MTR_7g087610	38.686	137	82	1	4	140	12	146	1.22e-28	102
MS.gene061768.t1	MTR_7g087610	46.875	64	34	0	79	142	12	75	1.51e-13	63.9
MS.gene061768.t1	MTR_5g017550	39.130	138	81	1	3	140	47	181	5.15e-28	102
MS.gene061768.t1	MTR_5g017550	40.845	71	42	0	2	72	118	188	4.35e-11	58.2
MS.gene061768.t1	MTR_2g098890	41.429	140	80	1	3	140	63	202	2.42e-27	101
MS.gene061768.t1	MTR_4g112460	32.143	140	95	0	3	142	10	149	1.11e-25	95.9
MS.gene061768.t1	MTR_3g089070	37.226	137	77	2	7	140	9	139	9.90e-25	92.4
MS.gene061768.t1	MTR_3g089090	37.226	137	77	2	7	140	8	138	1.03e-24	92.4
MS.gene061768.t1	MTR_8g066630	33.094	139	92	1	4	141	17	155	1.53e-24	92.8
MS.gene061768.t1	MTR_4g115170	38.961	154	78	3	3	140	63	216	3.20e-24	93.6
MS.gene061768.t1	MTR_7g074240	38.356	146	80	3	5	140	25	170	1.53e-23	90.5
MS.gene061768.t1	MTR_4g103655	37.143	140	79	2	4	140	6	139	1.92e-23	89.4
MS.gene061768.t1	MTR_4g103630	37.143	140	79	2	4	140	6	139	2.01e-23	89.4
MS.gene061768.t1	MTR_4g103650	36.429	140	80	2	4	140	2	135	3.53e-23	88.6
MS.gene061768.t1	MTR_3g083470	35.664	143	74	3	1	140	90	217	4.23e-23	90.9
MS.gene061768.t1	MTR_1g071150	36.496	137	84	1	4	140	12	145	1.08e-22	87.4
MS.gene061768.t1	MTR_1g071150	43.750	64	36	0	1	64	81	144	1.35e-11	58.9
MS.gene061768.t1	MTR_8g069915	31.250	144	96	1	2	142	7	150	5.55e-22	86.3
MS.gene061768.t1	MTR_0168s0120	38.393	112	67	1	29	140	1	110	1.43e-21	83.6
MS.gene061768.t1	MTR_6g025320	38.393	112	67	1	29	140	1	110	1.43e-21	83.6
MS.gene061768.t1	MTR_5g089320	35.714	140	82	3	5	142	374	507	6.24e-20	85.1
MS.gene061768.t1	MTR_8g078270	31.884	138	90	2	5	141	54	188	1.06e-19	80.9
MS.gene061768.t1	MTR_6g007613	35.252	139	88	1	4	142	29	165	1.86e-19	79.7
MS.gene061768.t1	MTR_6g007613	37.879	66	41	0	76	141	26	91	6.87e-11	57.4
MS.gene061768.t1	MTR_1g030440	34.932	146	81	3	3	140	21	160	5.64e-19	78.6
MS.gene061768.t1	MTR_1g046960	64.516	62	17	2	28	87	1	59	8.72e-19	76.3
MS.gene061768.t1	MTR_5g009830	35.915	142	79	4	5	142	372	505	1.67e-18	80.9
MS.gene061768.t1	MTR_0028s0170	35.000	140	83	3	5	142	384	517	1.69e-18	80.9
MS.gene061768.t1	MTR_3g051770	36.000	150	80	4	2	140	383	527	1.87e-18	80.9
MS.gene061768.t1	MTR_4g132070	35.000	140	79	4	5	140	397	528	1.87e-18	80.9
MS.gene061768.t1	MTR_5g092810	36.170	141	76	4	5	140	398	529	2.79e-18	80.5
MS.gene061768.t1	MTR_7g115040	34.848	132	84	1	9	140	17	146	4.79e-18	75.5
MS.gene061768.t1	MTR_8g099095	35.211	142	80	4	5	142	372	505	6.64e-18	79.3
MS.gene061768.t1	MTR_7g074020	33.577	137	89	1	4	140	30	164	7.81e-18	75.5
MS.gene061768.t1	MTR_7g074020	37.879	66	41	0	76	141	27	92	6.76e-11	57.4
MS.gene061768.t1	MTR_1g026190	33.803	142	82	4	5	142	388	521	2.46e-17	77.8
MS.gene061768.t1	MTR_5g027000	31.008	129	87	1	9	137	27	153	2.89e-16	71.2
MS.gene061768.t1	MTR_5g079470	59.322	59	23	1	8	66	14	71	7.43e-16	68.2
MS.gene061768.t1	MTR_3g088655	30.000	150	89	4	4	140	8	154	1.33e-15	69.7
MS.gene061768.t1	MTR_5g011850	30.345	145	93	4	2	142	7	147	2.23e-15	68.6
MS.gene061768.t1	MTR_6g007613	33.884	121	78	1	4	124	29	147	4.96e-15	68.2
MS.gene061768.t1	MTR_6g007613	37.879	66	41	0	76	141	26	91	4.71e-11	57.8
MS.gene061768.t1	MTR_7g091890	33.333	132	85	1	9	140	368	496	2.32e-14	68.9
MS.gene061768.t1	MTR_4g107490	32.847	137	87	3	5	140	379	511	4.18e-14	68.6
MS.gene061768.t1	MTR_7g074020	32.231	121	80	1	4	124	30	148	4.39e-14	65.5
MS.gene061768.t1	MTR_7g074020	37.879	66	41	0	76	141	27	92	6.18e-11	57.4
MS.gene061768.t1	MTR_4g132040	33.333	141	80	4	5	140	401	532	9.55e-14	67.4
MS.gene061768.t1	MTR_3g055570	30.435	138	79	1	4	141	52	172	2.26e-13	64.3
MS.gene061768.t1	MTR_8g096050	28.777	139	91	1	2	140	53	183	1.25e-12	64.3
MS.gene061768.t1	MTR_3g055510	30.508	118	62	2	25	142	38	135	1.66e-12	60.8
MS.gene061768.t1	MTR_3g098090	29.577	142	87	4	5	142	338	470	2.30e-12	63.5
MS.gene061768.t1	MTR_3g098070	29.577	142	87	4	5	142	335	467	3.10e-12	63.2
MS.gene061768.t1	MTR_4g066660	29.286	140	91	3	3	140	376	509	3.18e-12	63.2
MS.gene061768.t1	MTR_1g096490	31.915	141	85	4	5	142	336	468	5.17e-12	62.4
MS.gene061768.t1	MTR_7g068710	30.435	138	93	1	3	140	360	494	6.41e-12	62.0
MS.gene061768.t1	MTR_1g054865	31.655	139	84	4	5	140	467	597	1.16e-11	61.2
MS.gene061768.t1	MTR_5g022030	29.078	141	90	5	4	140	406	540	3.24e-11	60.1
MS.gene061768.t1	MTR_7g011010	46.154	65	33	1	78	140	133	197	5.87e-11	58.2
MS.gene061768.t1	MTR_5g099240	30.345	145	82	5	5	142	330	462	7.75e-11	58.9
MS.gene061768.t1	MTR_8g095440	29.577	142	87	4	5	142	336	468	9.01e-11	58.9
MS.gene061768.t1	MTR_5g099240	30.345	145	82	5	5	142	402	534	9.19e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061768.t1	AT1G18210	54.676	139	57	1	3	141	22	154	1.15e-49	157
MS.gene061768.t1	AT1G18210	54.676	139	57	1	3	141	22	154	1.15e-49	157
MS.gene061768.t1	AT1G73630	52.857	140	60	1	2	141	18	151	1.07e-47	151
MS.gene061768.t1	AT1G66400	49.275	138	70	0	3	140	14	151	4.87e-45	144
MS.gene061768.t1	AT5G37770	48.936	141	70	1	3	141	16	156	1.01e-43	141
MS.gene061768.t1	AT5G37770	48.936	141	70	1	3	141	16	156	1.01e-43	141
MS.gene061768.t1	AT1G24620	44.755	143	67	2	4	141	37	172	4.79e-37	125
MS.gene061768.t1	AT2G15680	45.714	140	70	2	3	141	49	183	2.02e-35	121
MS.gene061768.t1	AT3G07490	48.201	139	68	2	4	140	5	141	4.12e-34	117
MS.gene061768.t1	AT5G17470	45.000	140	71	2	5	141	3	139	9.17e-34	115
MS.gene061768.t1	AT1G05990	43.885	139	75	2	4	140	5	142	4.77e-33	114
MS.gene061768.t1	AT2G36180	46.269	134	71	1	8	140	4	137	1.99e-32	112
MS.gene061768.t1	AT4G03290	41.549	142	80	2	4	142	5	146	1.62e-31	110
MS.gene061768.t1	AT3G03400	39.535	129	78	0	5	133	6	134	2.73e-31	109
MS.gene061768.t1	AT2G43290	42.466	146	71	3	4	140	65	206	3.10e-31	111
MS.gene061768.t1	AT3G10190	43.165	139	74	3	4	140	70	205	5.22e-31	110
MS.gene061768.t1	AT5G37780	39.416	137	81	1	4	140	12	146	4.55e-29	103
MS.gene061768.t1	AT5G37780	45.312	64	35	0	79	142	12	75	4.65e-13	62.8
MS.gene061768.t1	AT1G66410	39.416	137	81	1	4	140	12	146	4.55e-29	103
MS.gene061768.t1	AT1G66410	45.312	64	35	0	79	142	12	75	4.65e-13	62.8
MS.gene061768.t1	AT5G21274	40.146	137	80	1	4	140	12	146	4.91e-29	103
MS.gene061768.t1	AT5G21274	46.875	64	34	0	79	142	12	75	1.26e-13	64.3
MS.gene061768.t1	AT4G12860	42.446	139	76	2	4	140	5	141	9.47e-29	103
MS.gene061768.t1	AT3G56800	39.416	137	81	1	4	140	12	146	1.04e-28	103
MS.gene061768.t1	AT3G56800	46.875	64	34	0	79	142	12	75	1.25e-13	64.3
MS.gene061768.t1	AT2G27030	39.416	137	81	1	4	140	12	146	1.04e-28	103
MS.gene061768.t1	AT2G27030	46.875	64	34	0	79	142	12	75	1.25e-13	64.3
MS.gene061768.t1	AT2G41110	39.416	137	81	1	4	140	12	146	1.04e-28	103
MS.gene061768.t1	AT2G41110	46.875	64	34	0	79	142	12	75	1.25e-13	64.3
MS.gene061768.t1	AT3G43810	39.416	137	81	1	4	140	12	146	1.05e-28	103
MS.gene061768.t1	AT3G43810	46.875	64	34	0	79	142	12	75	1.29e-13	64.3
MS.gene061768.t1	AT3G59440	40.288	139	78	2	4	140	51	186	1.40e-28	103
MS.gene061768.t1	AT2G27030	39.416	137	81	1	4	140	12	146	3.00e-28	102
MS.gene061768.t1	AT2G27030	46.875	64	34	0	79	142	12	75	2.90e-13	63.9
MS.gene061768.t1	AT3G43810	39.416	137	81	1	4	140	12	146	1.03e-27	102
MS.gene061768.t1	AT3G43810	46.875	64	34	0	79	142	12	75	6.26e-13	63.5
MS.gene061768.t1	AT3G22930	39.416	137	81	1	4	140	35	169	2.97e-27	100
MS.gene061768.t1	AT4G14640	39.416	137	81	1	4	140	13	147	1.31e-26	97.8
MS.gene061768.t1	AT5G42380	36.232	138	87	1	3	140	48	184	1.09e-25	96.3
MS.gene061768.t1	AT2G41110	36.242	149	81	2	4	140	12	158	2.61e-25	94.7
MS.gene061768.t1	AT2G41110	39.474	76	34	1	79	142	12	87	9.73e-11	57.0
MS.gene061768.t1	AT1G18530	31.724	145	96	1	1	142	1	145	4.66e-25	94.0
MS.gene061768.t1	AT1G32250	32.394	142	92	1	3	140	15	156	4.67e-25	94.4
MS.gene061768.t1	AT2G41410	36.429	140	86	3	4	141	70	208	5.18e-25	95.5
MS.gene061768.t1	AT2G41100	38.562	153	80	2	4	142	12	164	7.51e-25	97.1
MS.gene061768.t1	AT2G41100	37.255	153	81	2	4	141	101	253	4.13e-23	92.4
MS.gene061768.t1	AT2G41100	38.562	153	80	2	4	142	12	164	7.51e-25	97.1
MS.gene061768.t1	AT2G41100	37.255	153	81	2	4	141	101	253	4.13e-23	92.4
MS.gene061768.t1	AT5G37780	35.526	152	81	2	4	140	12	161	7.70e-25	93.6
MS.gene061768.t1	AT5G37780	38.211	123	74	1	18	140	13	133	1.32e-23	89.7
MS.gene061768.t1	AT1G66410	38.211	123	74	1	18	140	36	156	2.01e-23	89.7
MS.gene061768.t1	AT2G41100	37.255	153	81	2	4	141	66	218	2.30e-23	92.8
MS.gene061768.t1	AT2G41100	35.659	129	69	2	28	142	1	129	8.92e-17	75.1
MS.gene061768.t1	AT2G41100	37.255	153	81	2	4	141	66	218	2.30e-23	92.8
MS.gene061768.t1	AT2G41100	35.659	129	69	2	28	142	1	129	8.92e-17	75.1
MS.gene061768.t1	AT2G41100	37.255	153	81	2	4	141	66	218	2.30e-23	92.8
MS.gene061768.t1	AT2G41100	35.659	129	69	2	28	142	1	129	8.92e-17	75.1
MS.gene061768.t1	AT5G37780	38.211	123	74	1	18	140	52	172	3.31e-23	89.7
MS.gene061768.t1	AT4G20780	35.065	154	82	2	5	140	30	183	3.52e-23	90.1
MS.gene061768.t1	AT4G37010	36.806	144	79	2	4	142	27	163	3.85e-22	86.7
MS.gene061768.t1	AT4G37010	36.806	144	79	2	4	142	31	167	4.81e-22	86.7
MS.gene061768.t1	AT1G66410	38.393	112	67	1	29	140	1	110	5.29e-22	84.7
MS.gene061768.t1	AT1G66410	38.393	112	67	1	29	140	1	110	5.29e-22	84.7
MS.gene061768.t1	AT4G14640	38.211	123	74	1	18	140	9	129	8.40e-22	85.1
MS.gene061768.t1	AT3G25600	29.496	139	98	0	4	142	12	150	1.10e-21	85.5
MS.gene061768.t1	AT3G43810	38.393	112	67	1	29	140	1	110	1.50e-21	83.6
MS.gene061768.t1	AT3G43810	38.393	112	67	1	29	140	1	110	1.50e-21	83.6
MS.gene061768.t1	AT3G50360	35.252	139	88	1	4	142	27	163	2.13e-21	84.7
MS.gene061768.t1	AT3G50360	39.394	66	40	0	76	141	24	89	6.93e-11	57.4
MS.gene061768.t1	AT5G44460	33.562	146	87	2	5	140	29	174	2.24e-20	82.4
MS.gene061768.t1	AT1G76650	35.036	137	86	1	4	140	43	176	4.02e-20	81.6
MS.gene061768.t1	AT1G76650	35.036	137	86	1	4	140	43	176	4.02e-20	81.6
MS.gene061768.t1	AT4G04695	35.714	140	78	4	5	140	337	468	4.95e-20	85.5
MS.gene061768.t1	AT3G50770	30.986	142	95	2	3	141	63	204	1.26e-19	81.3
MS.gene061768.t1	AT2G41090	34.307	137	85	1	4	140	12	143	1.40e-19	80.9
MS.gene061768.t1	AT1G21550	36.000	150	78	4	3	140	9	152	1.41e-19	79.7
MS.gene061768.t1	AT3G51920	31.690	142	92	2	2	140	7	146	1.46e-19	79.7
MS.gene061768.t1	AT4G04700	35.714	140	78	4	5	140	337	468	1.89e-19	83.6
MS.gene061768.t1	AT1G76640	32.847	137	92	0	4	140	22	158	2.88e-19	79.0
MS.gene061768.t1	AT4G23650	35.915	142	79	4	5	142	384	517	3.78e-19	82.8
MS.gene061768.t1	AT5G19360	36.429	140	81	3	5	142	374	507	7.80e-19	82.0
MS.gene061768.t1	AT1G50700	37.143	140	76	4	5	140	379	510	8.25e-19	82.0
MS.gene061768.t1	AT3G20410	37.143	140	76	4	5	140	397	528	2.73e-18	80.5
MS.gene061768.t1	AT3G20410	37.143	140	76	4	5	140	397	528	2.73e-18	80.5
MS.gene061768.t1	AT4G21940	37.143	140	76	4	5	140	407	538	2.80e-18	80.5
MS.gene061768.t1	AT4G21940	37.143	140	76	4	5	140	407	538	2.89e-18	80.5
MS.gene061768.t1	AT4G04720	36.429	140	77	4	5	140	385	516	4.95e-18	79.7
MS.gene061768.t1	AT4G04720	36.429	140	77	4	5	140	385	516	4.95e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT4G04740	36.429	140	77	4	5	140	374	505	5.06e-18	79.7
MS.gene061768.t1	AT1G76650	35.036	137	76	2	4	140	43	166	1.01e-17	75.5
MS.gene061768.t1	AT5G12180	35.000	140	83	3	5	142	379	512	1.74e-17	78.2
MS.gene061768.t1	AT3G03000	31.387	137	93	1	4	140	20	155	1.86e-17	74.7
MS.gene061768.t1	AT3G03000	40.323	62	37	0	2	63	92	153	4.23e-11	57.8
MS.gene061768.t1	AT1G76040	35.211	142	80	4	5	142	179	312	2.99e-17	76.6
MS.gene061768.t1	AT1G76040	35.211	142	80	4	5	142	179	312	2.99e-17	76.6
MS.gene061768.t1	AT1G76040	35.211	142	80	4	5	142	417	550	5.87e-17	76.6
MS.gene061768.t1	AT3G03410	29.630	135	84	1	6	140	4	127	1.04e-16	71.6
MS.gene061768.t1	AT3G01830	35.461	141	83	5	3	140	10	145	3.18e-16	70.9
MS.gene061768.t1	AT1G74740	39.007	141	73	5	5	140	365	497	5.09e-16	73.9
MS.gene061768.t1	AT1G61950	35.507	138	81	3	5	140	405	536	1.04e-15	73.2
MS.gene061768.t1	AT5G17480	61.404	57	21	1	8	64	13	68	1.92e-15	67.0
MS.gene061768.t1	AT2G41100	35.200	125	66	2	32	141	4	128	3.69e-15	69.3
MS.gene061768.t1	AT4G04710	34.286	140	80	4	5	140	324	455	5.26e-15	70.9
MS.gene061768.t1	AT1G62820	29.496	139	93	3	5	142	14	148	5.32e-15	67.8
MS.gene061768.t1	AT4G04710	34.286	140	80	4	5	140	338	469	5.68e-15	70.9
MS.gene061768.t1	AT4G04710	34.286	140	80	4	5	140	351	482	6.43e-15	70.9
MS.gene061768.t1	AT1G50700	31.325	166	76	5	5	140	379	536	1.92e-14	69.3
MS.gene061768.t1	AT1G12310	29.530	149	89	5	2	142	8	148	2.12e-14	66.2
MS.gene061768.t1	AT3G51850	31.429	140	89	2	3	140	358	492	3.93e-14	68.6
MS.gene061768.t1	AT1G18890	36.170	141	77	5	5	140	369	501	4.44e-14	68.6
MS.gene061768.t1	AT3G22930	36.082	97	60	1	4	100	35	129	4.88e-14	64.7
MS.gene061768.t1	AT4G04710	33.803	142	80	5	5	140	351	484	8.76e-14	67.4
MS.gene061768.t1	AT2G17890	30.496	141	88	5	4	140	415	549	9.52e-14	67.4
MS.gene061768.t1	AT3G03430	56.140	57	24	1	8	64	13	68	9.59e-14	62.8
MS.gene061768.t1	AT3G57530	33.577	137	85	3	5	140	369	500	1.10e-13	67.4
MS.gene061768.t1	AT2G41860	31.618	136	90	1	5	140	360	492	1.80e-13	66.6
MS.gene061768.t1	AT2G41860	31.618	136	90	1	5	140	360	492	1.88e-13	66.6
MS.gene061768.t1	AT1G35670	32.394	142	83	4	5	142	332	464	3.01e-13	65.9
MS.gene061768.t1	AT4G09570	32.394	142	83	4	5	142	331	463	6.36e-13	65.1
MS.gene061768.t1	AT4G14640	34.951	103	55	2	4	101	13	108	1.03e-12	61.2
MS.gene061768.t1	AT5G66210	31.915	141	86	5	4	140	369	503	1.18e-12	64.3
MS.gene061768.t1	AT5G66210	31.915	141	86	5	4	140	369	503	1.18e-12	64.3
MS.gene061768.t1	AT5G12480	31.387	137	90	2	5	140	271	404	3.31e-12	62.8
MS.gene061768.t1	AT5G12480	31.387	137	90	2	5	140	365	498	3.32e-12	63.2
MS.gene061768.t1	AT4G36070	30.282	142	89	5	3	140	377	512	3.55e-12	62.8
MS.gene061768.t1	AT4G36070	30.282	142	89	5	3	140	377	512	3.62e-12	62.8
MS.gene061768.t1	AT5G07320	27.206	136	91	1	5	140	38	165	5.32e-12	62.4
MS.gene061768.t1	AT2G17290	31.034	145	81	5	5	142	391	523	6.81e-12	62.0
MS.gene061768.t1	AT2G17290	31.034	145	81	5	5	142	391	523	6.81e-12	62.0
MS.gene061768.t1	AT5G23580	28.571	140	91	3	5	142	328	460	1.25e-11	61.2
MS.gene061768.t1	AT5G51050	28.058	139	92	1	2	140	49	179	2.39e-11	60.5
MS.gene061768.t1	AT3G10660	27.857	140	92	3	5	142	492	624	4.59e-11	59.7
MS.gene061768.t1	AT3G10660	27.857	140	92	3	5	142	492	624	4.59e-11	59.7
MS.gene061768.t1	AT5G04870	29.078	141	89	4	5	142	456	588	8.52e-11	58.9
MS.gene061768.t1	AT2G31500	28.777	139	93	3	5	140	372	507	9.32e-11	58.9

Find 32 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATGCTGCTGCTGCCGCTGC+TGG	0.226421	1.2:+29822440	MS.gene061768:CDS
TACTTCATCGGAAGTTGGTT+TGG	0.343185	1.2:-29822339	None:intergenic
GAAGAGATGCTTTCGAAGCT+TGG	0.383501	1.2:+29822314	MS.gene061768:CDS
ATGCTGCTGCTGCCGCTGCT+GGG	0.420018	1.2:+29822441	MS.gene061768:CDS
CACATCGTTCTTAACAAACT+TGG	0.425233	1.2:+29822539	MS.gene061768:CDS
CAACGTTGCTTATCATTCTC+TGG	0.426473	1.2:-29822586	None:intergenic
CATCATTTGCTTTACTTCAT+CGG	0.445586	1.2:-29822351	None:intergenic
TGCTGCCGCTGCTGGGAAAG+AGG	0.481306	1.2:+29822448	MS.gene061768:CDS
CGATGAAGTAAAGCAAATGA+TGG	0.494190	1.2:+29822352	MS.gene061768:CDS
TGCTTTACTTCATCGGAAGT+TGG	0.497249	1.2:-29822344	None:intergenic
TTCAATAAGTTTGACAAGAA+CGG	0.516849	1.2:+29822263	MS.gene061768:CDS
TGAGGAGTTCAAGAAGATGA+TGG	0.534080	1.2:+29822637	MS.gene061768:CDS
GTTGCGAATCTCGTCATCCA+TGG	0.537699	1.2:-29822237	None:intergenic
AACGTTGATGCGGATGGAGA+TGG	0.539699	1.2:+29822602	MS.gene061768:CDS
CGACCTTTACGACCTTGACA+AGG	0.551708	1.2:+29822490	MS.gene061768:CDS
AGATGGAAAAGTTAACTTTG+AGG	0.561239	1.2:+29822619	MS.gene061768:CDS
CGTCCTTGTCAAGGTCGTAA+AGG	0.562736	1.2:-29822493	None:intergenic
ATAAGCAACGTTGATGCGGA+TGG	0.565191	1.2:+29822596	MS.gene061768:CDS
TATATTGATCAGAACGGCGA+CGG	0.568824	1.2:+29822377	MS.gene061768:CDS
CATTCTCTGGCAGTCACTGA+GGG	0.581685	1.2:-29822573	None:intergenic
TGCCGCTGCTGGGAAAGAGG+AGG	0.590208	1.2:+29822451	MS.gene061768:CDS
CAGCAGCAGCATCGTTGCGG+TGG	0.600198	1.2:-29822430	None:intergenic
CTCCTCCTCTTTCCCAGCAG+CGG	0.601275	1.2:-29822453	None:intergenic
ATGGAATATATTGATCAGAA+CGG	0.612310	1.2:+29822371	MS.gene061768:CDS
AGATGAGACCGTCCTTGTCA+AGG	0.613596	1.2:-29822502	None:intergenic
TGACGGAAAGATCTCTGTCT+CGG	0.614544	1.2:+29822286	MS.gene061768:CDS
AAGTTTGACAAGAACGGTGA+CGG	0.620500	1.2:+29822269	MS.gene061768:CDS
AATGATAAGCAACGTTGATG+CGG	0.629096	1.2:+29822592	MS.gene061768:CDS
TCATTCTCTGGCAGTCACTG+AGG	0.634357	1.2:-29822574	None:intergenic
CTTTACGACCTTGACAAGGA+CGG	0.640370	1.2:+29822494	MS.gene061768:CDS
CGGCAGCAGCAGCATCGTTG+CGG	0.641338	1.2:-29822433	None:intergenic
AAGAACGATGTGCAGTTCTG+TGG	0.688244	1.2:-29822528	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATGGAATATATTGATCAGAA+CGG	+	chr1.2:29822371-29822390	MS.gene061768:CDS	25.0%
!	TTCAATAAGTTTGACAAGAA+CGG	+	chr1.2:29822263-29822282	MS.gene061768:CDS	25.0%
	AGATGGAAAAGTTAACTTTG+AGG	+	chr1.2:29822619-29822638	MS.gene061768:CDS	30.0%
	CATCATTTGCTTTACTTCAT+CGG	-	chr1.2:29822354-29822373	None:intergenic	30.0%
	AATGATAAGCAACGTTGATG+CGG	+	chr1.2:29822592-29822611	MS.gene061768:CDS	35.0%
	CACATCGTTCTTAACAAACT+TGG	+	chr1.2:29822539-29822558	MS.gene061768:CDS	35.0%
	CGATGAAGTAAAGCAAATGA+TGG	+	chr1.2:29822352-29822371	MS.gene061768:CDS	35.0%
	AAGTTTGACAAGAACGGTGA+CGG	+	chr1.2:29822269-29822288	MS.gene061768:CDS	40.0%
	CAACGTTGCTTATCATTCTC+TGG	-	chr1.2:29822589-29822608	None:intergenic	40.0%
	TATATTGATCAGAACGGCGA+CGG	+	chr1.2:29822377-29822396	MS.gene061768:CDS	40.0%
	TGAGGAGTTCAAGAAGATGA+TGG	+	chr1.2:29822637-29822656	MS.gene061768:CDS	40.0%
	TGCTTTACTTCATCGGAAGT+TGG	-	chr1.2:29822347-29822366	None:intergenic	40.0%
!	TACTTCATCGGAAGTTGGTT+TGG	-	chr1.2:29822342-29822361	None:intergenic	40.0%
	AAGAACGATGTGCAGTTCTG+TGG	-	chr1.2:29822531-29822550	None:intergenic	45.0%
	ATAAGCAACGTTGATGCGGA+TGG	+	chr1.2:29822596-29822615	MS.gene061768:CDS	45.0%
	CTTTACGACCTTGACAAGGA+CGG	+	chr1.2:29822494-29822513	MS.gene061768:CDS	45.0%
	GAAGAGATGCTTTCGAAGCT+TGG	+	chr1.2:29822314-29822333	MS.gene061768:CDS	45.0%
	TGACGGAAAGATCTCTGTCT+CGG	+	chr1.2:29822286-29822305	MS.gene061768:CDS	45.0%
	AACGTTGATGCGGATGGAGA+TGG	+	chr1.2:29822602-29822621	MS.gene061768:CDS	50.0%
	AGATGAGACCGTCCTTGTCA+AGG	-	chr1.2:29822505-29822524	None:intergenic	50.0%
	CATTCTCTGGCAGTCACTGA+GGG	-	chr1.2:29822576-29822595	None:intergenic	50.0%
	CGACCTTTACGACCTTGACA+AGG	+	chr1.2:29822490-29822509	MS.gene061768:CDS	50.0%
	CGTCCTTGTCAAGGTCGTAA+AGG	-	chr1.2:29822496-29822515	None:intergenic	50.0%
	TCATTCTCTGGCAGTCACTG+AGG	-	chr1.2:29822577-29822596	None:intergenic	50.0%
	CTCCTCCTCTTTCCCAGCAG+CGG	-	chr1.2:29822456-29822475	None:intergenic	60.0%
	ATGCTGCTGCTGCCGCTGCT+GGG	+	chr1.2:29822441-29822460	MS.gene061768:CDS	65.0%
	CAGCAGCAGCATCGTTGCGG+TGG	-	chr1.2:29822433-29822452	None:intergenic	65.0%
	CGGCAGCAGCAGCATCGTTG+CGG	-	chr1.2:29822436-29822455	None:intergenic	65.0%
	TGCCGCTGCTGGGAAAGAGG+AGG	+	chr1.2:29822451-29822470	MS.gene061768:CDS	65.0%
	TGCTGCCGCTGCTGGGAAAG+AGG	+	chr1.2:29822448-29822467	MS.gene061768:CDS	65.0%
	GATGCTGCTGCTGCCGCTGC+TGG	+	chr1.2:29822440-29822459	MS.gene061768:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	29822239	29822667	29822239	ID=MS.gene061768
chr1.2	mRNA	29822239	29822667	29822239	ID=MS.gene061768.t1;Parent=MS.gene061768
chr1.2	exon	29822239	29822667	29822239	ID=MS.gene061768.t1.exon1;Parent=MS.gene061768.t1
chr1.2	CDS	29822239	29822667	29822239	ID=cds.MS.gene061768.t1;Parent=MS.gene061768.t1

Gene Sequence

>MS.gene061768

ATGGATGACGAGATTCGCAACATCTTCAATAAGTTTGACAAGAACGGTGACGGAAAGATCTCTGTCTCGGAACTAGAAGAGATGCTTTCGAAGCTTGGATCCAAACCAACTTCCGATGAAGTAAAGCAAATGATGGAATATATTGATCAGAACGGCGACGGTTACATTGATCTTGAAGAATTCGCAAAATTCCACCGCAACGATGCTGCTGCTGCCGCTGCTGGGAAAGAGGAGGAGATTCGTGATGCTTTCGACCTTTACGACCTTGACAAGGACGGTCTCATCTCTACCACAGAACTGCACATCGTTCTTAACAAACTTGGTGAGAAGTGCTCCCTCAGTGACTGCCAGAGAATGATAAGCAACGTTGATGCGGATGGAGATGGAAAAGTTAACTTTGAGGAGTTCAAGAAGATGATGGCTCGCTGA

Protein sequence

>MS.gene061768.t1

MDDEIRNIFNKFDKNGDGKISVSELEEMLSKLGSKPTSDEVKQMMEYIDQNGDGYIDLEEFAKFHRNDAAAAAAGKEEEIRDAFDLYDLDKDGLISTTELHIVLNKLGEKCSLSDCQRMISNVDADGDGKVNFEEFKKMMAR