AlfalfaGEDB | MS.gene44354

M. sativa cultivar XinJiangDaYe / MS.gene44354

KEGG: K02977
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00240.26 PF01599.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44354.t1	XP_003613203.1	99.4	155	1	0	1	155	1	155	2.70E-65	258.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44354.t1	P62980	96.7	153	5	0	1	153	1	153	3.9e-65	248.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44354.t1	G7K080	99.4	155	1	0	1	155	1	155	1.9e-65	258.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050252	MS.gene44354	0.80607	9.83E-50	-1.69E-46
MS.gene058994	MS.gene44354	0.809522	1.81E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene008225	MS.gene44354	PPI
MS.gene64324	MS.gene44354	PPI
MS.gene44354	MS.gene21696	PPI
MS.gene44354	MS.gene53465	PPI
MS.gene024717	MS.gene44354	PPI
MS.gene44354	MS.gene96922	PPI
MS.gene64313	MS.gene44354	PPI
MS.gene44354	MS.gene64314	PPI
MS.gene21932	MS.gene44354	PPI
MS.gene027655	MS.gene44354	PPI
MS.gene53662	MS.gene44354	PPI
MS.gene44354	MS.gene21931	PPI
MS.gene44354	MS.gene001381	PPI
MS.gene44354	MS.gene53659	PPI
MS.gene44354	MS.gene061768	PPI
MS.gene44354	MS.gene017446	PPI
MS.gene44354	MS.gene80714	PPI
MS.gene44354	MS.gene53650	PPI
MS.gene44354	MS.gene96914	PPI
MS.gene44354	MS.gene96913	PPI
MS.gene44354	MS.gene065998	PPI
MS.gene065998	MS.gene44354	PPI
MS.gene63281	MS.gene44354	PPI
MS.gene68345	MS.gene44354	PPI
MS.gene44354	MS.gene036602	PPI
MS.gene44354	MS.gene89216	PPI
MS.gene44354	MS.gene64308	PPI
MS.gene62258	MS.gene44354	PPI
MS.gene000724	MS.gene44354	PPI
MS.gene44354	MS.gene023648	PPI
MS.gene64311	MS.gene44354	PPI
MS.gene036602	MS.gene44354	PPI
MS.gene27879	MS.gene44354	PPI
MS.gene44354	MS.gene64316	PPI
MS.gene44354	MS.gene64317	PPI
MS.gene04915	MS.gene44354	PPI
MS.gene64327	MS.gene44354	PPI
MS.gene000738	MS.gene44354	PPI
MS.gene64307	MS.gene44354	PPI
MS.gene44354	MS.gene53648	PPI
MS.gene04917	MS.gene44354	PPI
MS.gene44354	MS.gene64310	PPI
MS.gene44354	MS.gene29459	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44354.t1	MTR_5g033960	99.355	155	1	0	1	155	1	155	1.56e-113	318
MS.gene44354.t1	MTR_8g088060	98.710	155	2	0	1	155	1	155	5.89e-113	317
MS.gene44354.t1	MTR_7g105080	98.684	76	1	0	1	76	1	76	5.53e-49	154
MS.gene44354.t1	MTR_3g092130	98.684	76	1	0	1	76	1	76	5.53e-49	154
MS.gene44354.t1	MTR_1g059690	98.684	76	1	0	1	76	1	76	5.53e-49	154
MS.gene44354.t1	MTR_5g092700	97.403	77	2	0	1	77	1	77	6.10e-49	155
MS.gene44354.t1	MTR_5g092700	62.162	74	28	0	3	76	79	152	2.63e-26	97.4
MS.gene44354.t1	MTR_4g073580	97.403	77	2	0	1	77	1	77	6.10e-49	155
MS.gene44354.t1	MTR_4g073580	62.162	74	28	0	3	76	79	152	2.63e-26	97.4
MS.gene44354.t1	MTR_3g092130	98.684	76	1	0	1	76	1	76	7.04e-49	154
MS.gene44354.t1	MTR_4g073580	97.403	77	2	0	1	77	1	77	2.44e-48	154
MS.gene44354.t1	MTR_4g073580	44.231	104	28	1	3	76	79	182	9.43e-20	81.3
MS.gene44354.t1	MTR_7g116360	96.154	78	3	0	1	78	1	78	4.84e-48	155
MS.gene44354.t1	MTR_7g116360	96.154	78	3	0	1	78	77	154	4.84e-48	155
MS.gene44354.t1	MTR_7g116360	98.684	76	1	0	1	76	153	228	5.76e-48	155
MS.gene44354.t1	MTR_4g088485	96.154	78	3	0	1	78	1	78	5.24e-48	154
MS.gene44354.t1	MTR_4g088485	98.684	76	1	0	1	76	138	213	6.38e-48	154
MS.gene44354.t1	MTR_4g088485	76.923	78	3	1	1	78	77	139	4.10e-33	116
MS.gene44354.t1	MTR_1g066390	97.403	77	2	0	1	77	153	229	6.32e-48	155
MS.gene44354.t1	MTR_1g066390	96.154	78	3	0	1	78	1	78	6.74e-48	155
MS.gene44354.t1	MTR_1g066390	96.154	78	3	0	1	78	77	154	6.74e-48	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	1	78	1.62e-47	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	77	154	1.62e-47	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	153	230	1.62e-47	155
MS.gene44354.t1	MTR_4g080920	94.872	78	4	0	1	78	77	154	1.79e-47	154
MS.gene44354.t1	MTR_4g080920	94.872	78	4	0	1	78	1	78	2.61e-47	153
MS.gene44354.t1	MTR_4g080920	67.532	77	25	0	1	77	153	229	6.06e-29	106
MS.gene44354.t1	MTR_6g061930	96.154	78	3	0	1	78	1	78	3.22e-47	155
MS.gene44354.t1	MTR_6g061930	96.154	78	3	0	1	78	77	154	3.22e-47	155
MS.gene44354.t1	MTR_6g061930	98.684	76	1	0	1	76	214	289	3.91e-47	154
MS.gene44354.t1	MTR_6g061930	74.359	78	5	1	1	78	153	215	1.59e-30	112
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	1	78	3.68e-47	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	77	154	3.68e-47	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	153	230	3.68e-47	155
MS.gene44354.t1	MTR_4g081010	98.684	76	1	0	1	76	229	304	4.37e-47	155
MS.gene44354.t1	MTR_7g116360	96.154	78	3	0	1	78	49	126	3.77e-47	154
MS.gene44354.t1	MTR_7g116360	96.154	78	3	0	1	78	125	202	3.77e-47	154
MS.gene44354.t1	MTR_7g116360	98.684	76	1	0	1	76	201	276	4.44e-47	154
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	1	78	4.61e-47	154
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	77	154	4.61e-47	154
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	153	230	4.61e-47	154
MS.gene44354.t1	MTR_8g081020	96.154	78	3	0	1	78	1	78	1.84e-46	155
MS.gene44354.t1	MTR_8g081020	96.154	78	3	0	1	78	77	154	1.84e-46	155
MS.gene44354.t1	MTR_8g081020	96.154	78	3	0	1	78	153	230	1.84e-46	155
MS.gene44354.t1	MTR_8g081020	96.154	78	3	0	1	78	229	306	1.84e-46	155
MS.gene44354.t1	MTR_8g081020	98.684	76	1	0	1	76	305	380	2.16e-46	155
MS.gene44354.t1	MTR_4g080797	96.154	78	3	0	1	78	1	78	1.88e-46	155
MS.gene44354.t1	MTR_4g080797	96.154	78	3	0	1	78	77	154	1.88e-46	155
MS.gene44354.t1	MTR_4g080797	96.154	78	3	0	1	78	153	230	1.88e-46	155
MS.gene44354.t1	MTR_4g080797	96.154	78	3	0	1	78	229	306	1.88e-46	155
MS.gene44354.t1	MTR_4g080797	98.684	76	1	0	1	76	305	380	2.23e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	1	78	1.88e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	77	154	1.88e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	153	230	1.88e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	229	306	1.88e-46	155
MS.gene44354.t1	MTR_8g018230	98.684	76	1	0	1	76	305	380	2.23e-46	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	1	78	1.90e-46	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	77	154	1.90e-46	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	153	230	1.90e-46	155
MS.gene44354.t1	MTR_4g091580	98.684	76	1	0	1	76	305	380	2.26e-46	155
MS.gene44354.t1	MTR_4g091580	94.872	78	4	0	1	78	229	306	5.41e-46	154
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	1	78	2.12e-46	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	77	154	2.12e-46	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	153	230	2.12e-46	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	229	306	2.12e-46	155
MS.gene44354.t1	MTR_4g081010	98.684	76	1	0	1	76	305	380	2.51e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	1	78	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	77	154	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	153	230	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	229	306	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	305	382	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	98.684	76	1	0	1	76	381	456	1.02e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	1	78	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	77	154	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	153	230	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	229	306	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	305	382	8.62e-46	155
MS.gene44354.t1	MTR_8g018230	98.684	76	1	0	1	76	381	456	1.02e-45	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	1	78	2.44e-45	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	77	154	2.44e-45	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	153	230	2.44e-45	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	229	306	2.44e-45	155
MS.gene44354.t1	MTR_4g091580	96.154	78	3	0	1	78	381	458	2.44e-45	155
MS.gene44354.t1	MTR_4g091580	98.684	76	1	0	1	76	457	532	2.88e-45	155
MS.gene44354.t1	MTR_4g091580	93.590	78	5	0	1	78	305	382	8.14e-44	151
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	1	78	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	77	154	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	153	230	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	229	306	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	305	382	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	96.154	78	3	0	1	78	381	458	2.63e-45	155
MS.gene44354.t1	MTR_8g018230	98.684	76	1	0	1	76	457	532	3.10e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	1	78	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	77	154	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	153	230	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	229	306	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	305	382	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	96.154	78	3	0	1	78	381	458	2.85e-45	155
MS.gene44354.t1	MTR_4g081010	98.684	76	1	0	1	76	457	532	3.37e-45	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	77	154	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	153	230	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	229	306	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	305	382	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	381	458	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	457	534	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	533	610	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	609	686	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	96.154	78	3	0	1	78	685	762	2.15e-44	155
MS.gene44354.t1	MTR_4g088495	98.684	76	1	0	1	76	761	836	2.49e-44	155
MS.gene44354.t1	MTR_4g088495	94.872	78	4	0	1	78	1	78	4.01e-43	152
MS.gene44354.t1	MTR_8g479250	93.590	78	5	0	1	78	141	218	2.65e-37	129
MS.gene44354.t1	MTR_8g479250	75.000	72	7	1	1	72	217	277	6.53e-26	100
MS.gene44354.t1	MTR_8g479250	97.561	41	1	0	1	41	1	41	8.46e-20	83.6
MS.gene44354.t1	MTR_8g479250	88.889	36	4	0	43	78	107	142	3.36e-14	68.6
MS.gene44354.t1	MTR_5g076810	68.831	77	23	1	1	76	194	270	1.92e-27	103
MS.gene44354.t1	MTR_1g046640	69.737	76	23	0	1	76	240	315	1.95e-27	104
MS.gene44354.t1	MTR_5g076660	68.493	73	23	0	1	73	266	338	2.82e-26	101
MS.gene44354.t1	MTR_5g067400	67.105	76	25	0	1	76	241	316	6.51e-25	97.8
MS.gene44354.t1	MTR_5g061310	60.000	75	30	0	1	75	2	76	1.97e-24	90.5
MS.gene44354.t1	MTR_5g076505	61.333	75	29	0	1	75	240	314	8.94e-23	92.0
MS.gene44354.t1	MTR_5g076370	64.384	73	26	0	1	73	267	339	1.19e-22	92.0
MS.gene44354.t1	MTR_2g038430	60.000	75	30	0	1	75	268	342	3.10e-22	90.9
MS.gene44354.t1	MTR_1g046650	57.895	76	32	0	1	76	171	246	4.23e-22	89.0
MS.gene44354.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	6.44e-22	89.7
MS.gene44354.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	7.45e-22	89.4
MS.gene44354.t1	MTR_1g046650	57.895	76	32	0	1	76	271	346	1.15e-21	89.4
MS.gene44354.t1	MTR_5g076720	64.000	75	27	0	1	75	315	389	1.36e-21	89.7
MS.gene44354.t1	MTR_5g076740	59.211	76	30	1	1	75	86	161	1.94e-21	85.1
MS.gene44354.t1	MTR_2g038420	60.000	75	30	0	1	75	260	334	5.06e-21	87.4
MS.gene44354.t1	MTR_7g094390	58.667	75	31	0	1	75	402	476	6.37e-20	85.5
MS.gene44354.t1	MTR_5g076520	57.333	75	31	1	1	74	244	318	1.07e-18	80.9
MS.gene44354.t1	MTR_7g024290	60.526	76	29	1	1	75	241	316	4.47e-18	79.3
MS.gene44354.t1	MTR_4g009980	55.224	67	30	0	9	75	4	70	1.58e-17	72.4
MS.gene44354.t1	MTR_5g061290	53.333	75	35	0	1	75	252	326	3.14e-17	77.0
MS.gene44354.t1	MTR_5g076350	50.000	76	37	1	1	75	8	83	1.43e-15	67.8
MS.gene44354.t1	MTR_5g076780	58.333	60	25	0	15	74	4	63	8.00e-15	65.5
MS.gene44354.t1	MTR_5g076760	58.621	58	24	0	10	67	4	61	1.11e-14	65.5
MS.gene44354.t1	MTR_5g076340	50.649	77	36	2	1	75	9	85	2.19e-14	64.7
MS.gene44354.t1	MTR_4g080783	41.176	85	46	1	44	124	7	91	2.40e-12	59.7
MS.gene44354.t1	MTR_4g070200	56.140	57	21	2	45	101	17	69	8.85e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44354.t1	AT1G23410	91.558	154	13	0	1	154	1	154	1.46e-91	263
MS.gene44354.t1	AT2G47110	95.484	155	7	0	1	155	1	155	6.34e-90	259
MS.gene44354.t1	AT2G47110	95.484	155	7	0	1	155	1	155	6.34e-90	259
MS.gene44354.t1	AT3G62250	96.053	152	6	0	1	152	1	152	2.03e-89	257
MS.gene44354.t1	AT3G52590	98.684	76	1	0	1	76	1	76	5.85e-49	154
MS.gene44354.t1	AT2G36170	98.684	76	1	0	1	76	1	76	5.85e-49	154
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	1	78	6.25e-49	155
MS.gene44354.t1	AT4G05050	98.684	76	1	0	1	76	77	152	7.45e-49	154
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	6.25e-49	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	77	152	7.45e-49	154
MS.gene44354.t1	AT2G35635	97.403	77	2	0	1	77	1	77	7.68e-49	154
MS.gene44354.t1	AT2G35635	62.162	74	28	0	3	76	79	152	1.05e-25	95.9
MS.gene44354.t1	AT1G31340	97.403	77	2	0	1	77	1	77	1.18e-48	154
MS.gene44354.t1	AT1G31340	63.514	74	27	0	3	76	79	152	8.98e-27	99.0
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	1	78	5.07e-48	155
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	77	154	5.07e-48	155
MS.gene44354.t1	AT4G05050	98.684	76	1	0	1	76	153	228	6.04e-48	155
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	1	78	5.07e-48	155
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	77	154	5.07e-48	155
MS.gene44354.t1	AT4G05050	98.684	76	1	0	1	76	153	228	6.04e-48	155
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	1	78	5.07e-48	155
MS.gene44354.t1	AT4G05050	96.154	78	3	0	1	78	77	154	5.07e-48	155
MS.gene44354.t1	AT4G05050	98.684	76	1	0	1	76	153	228	6.04e-48	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	1	78	5.07e-48	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	77	154	5.07e-48	155
MS.gene44354.t1	AT4G02890	98.684	76	1	0	1	76	153	228	6.04e-48	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	1	78	5.07e-48	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	77	154	5.07e-48	155
MS.gene44354.t1	AT4G02890	98.684	76	1	0	1	76	153	228	6.04e-48	155
MS.gene44354.t1	AT1G55060	94.872	78	4	0	1	78	77	154	2.07e-47	153
MS.gene44354.t1	AT1G55060	94.805	77	4	0	1	77	153	229	1.92e-45	148
MS.gene44354.t1	AT1G55060	83.333	78	13	0	1	78	1	78	3.77e-41	137
MS.gene44354.t1	AT5G03240	97.403	77	2	0	1	77	229	305	2.30e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	1	78	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	77	154	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	153	230	3.51e-47	155
MS.gene44354.t1	AT5G03240	97.403	77	2	0	1	77	229	305	2.30e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	1	78	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	77	154	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	153	230	3.51e-47	155
MS.gene44354.t1	AT5G03240	97.403	77	2	0	1	77	229	305	2.30e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	1	78	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	77	154	3.51e-47	155
MS.gene44354.t1	AT5G03240	96.154	78	3	0	1	78	153	230	3.51e-47	155
MS.gene44354.t1	AT5G20620	97.403	77	2	0	1	77	229	305	2.30e-47	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	1	78	3.51e-47	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	77	154	3.51e-47	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	153	230	3.51e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	3.50e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	3.50e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	3.50e-47	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	229	304	4.15e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	3.50e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	3.50e-47	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	3.50e-47	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	229	304	4.15e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	1	78	3.50e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	77	154	3.50e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	153	230	3.50e-47	155
MS.gene44354.t1	AT4G02890	98.684	76	1	0	1	76	229	304	4.15e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	1	78	3.50e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	77	154	3.50e-47	155
MS.gene44354.t1	AT4G02890	96.154	78	3	0	1	78	153	230	3.50e-47	155
MS.gene44354.t1	AT4G02890	98.684	76	1	0	1	76	229	304	4.15e-47	155
MS.gene44354.t1	AT1G65350	96.154	78	3	0	1	78	1	78	6.40e-47	155
MS.gene44354.t1	AT1G65350	94.872	78	4	0	1	78	152	229	8.83e-46	152
MS.gene44354.t1	AT1G65350	94.872	78	3	1	1	78	77	153	5.77e-44	147
MS.gene44354.t1	AT1G65350	78.022	91	6	1	1	77	228	318	3.40e-38	132
MS.gene44354.t1	AT5G20620	97.403	77	2	0	1	77	305	381	1.30e-46	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	1	78	1.97e-46	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	77	154	1.97e-46	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	153	230	1.97e-46	155
MS.gene44354.t1	AT5G20620	96.154	78	3	0	1	78	229	306	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	229	306	1.97e-46	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	305	380	2.34e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	229	306	1.97e-46	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	305	380	2.34e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	1.97e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	229	306	1.97e-46	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	305	380	2.34e-46	155
MS.gene44354.t1	AT5G37640	93.590	78	5	0	1	78	79	156	6.24e-46	152
MS.gene44354.t1	AT5G37640	89.744	78	8	0	1	78	155	232	5.96e-42	142
MS.gene44354.t1	AT5G37640	90.909	77	6	1	1	76	231	307	9.30e-40	136
MS.gene44354.t1	AT5G37640	75.641	78	19	0	1	78	3	80	3.80e-33	119
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	229	306	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	305	382	9.03e-46	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	381	456	1.07e-45	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	1	78	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	77	154	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	153	230	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	229	306	9.03e-46	155
MS.gene44354.t1	AT4G05320	96.154	78	3	0	1	78	305	382	9.03e-46	155
MS.gene44354.t1	AT4G05320	98.684	76	1	0	1	76	381	456	1.07e-45	155
MS.gene44354.t1	AT3G09790	89.744	78	8	0	1	78	79	156	3.86e-39	139
MS.gene44354.t1	AT3G09790	82.051	78	14	0	1	78	3	80	1.19e-35	130
MS.gene44354.t1	AT3G09790	78.378	74	16	0	1	74	552	625	3.11e-30	115
MS.gene44354.t1	AT3G09790	69.231	78	24	0	1	78	393	470	1.57e-27	107
MS.gene44354.t1	AT3G09790	73.684	76	18	1	1	74	319	394	7.02e-27	105
MS.gene44354.t1	AT3G09790	68.675	83	21	1	1	78	238	320	3.11e-26	103
MS.gene44354.t1	AT3G09790	65.854	82	21	2	1	75	155	236	3.08e-25	100
MS.gene44354.t1	AT3G09790	63.529	85	24	1	1	78	469	553	2.95e-24	98.2
MS.gene44354.t1	AT3G09790	89.744	78	8	0	1	78	79	156	3.86e-39	139
MS.gene44354.t1	AT3G09790	82.051	78	14	0	1	78	3	80	1.19e-35	130
MS.gene44354.t1	AT3G09790	78.378	74	16	0	1	74	552	625	3.11e-30	115
MS.gene44354.t1	AT3G09790	69.231	78	24	0	1	78	393	470	1.57e-27	107
MS.gene44354.t1	AT3G09790	73.684	76	18	1	1	74	319	394	7.02e-27	105
MS.gene44354.t1	AT3G09790	68.675	83	21	1	1	78	238	320	3.11e-26	103
MS.gene44354.t1	AT3G09790	65.854	82	21	2	1	75	155	236	3.08e-25	100
MS.gene44354.t1	AT3G09790	63.529	85	24	1	1	78	469	553	2.95e-24	98.2
MS.gene44354.t1	AT1G53930	75.342	73	18	0	1	73	86	158	9.63e-33	114
MS.gene44354.t1	AT1G53950	60.563	71	28	0	1	71	69	139	3.45e-24	91.7
MS.gene44354.t1	AT1G11980	55.263	76	34	0	1	76	1	76	3.97e-24	89.7
MS.gene44354.t1	AT1G53945	42.857	70	40	0	1	70	46	115	7.19e-12	59.3
MS.gene44354.t1	AT5G42220	37.500	72	45	0	1	72	24	95	1.23e-11	62.0
MS.gene44354.t1	AT5G42220	37.500	72	45	0	1	72	24	95	1.23e-11	62.0
MS.gene44354.t1	AT4G12570	37.333	75	46	1	1	74	95	169	2.03e-11	61.2

Find 44 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCTTATGCTTAATCTTCT+TGG	0.173045	5.1:-24884737	None:intergenic
TCCTTCCTTATCCTGGATCT+TGG	0.283815	5.1:-24884557	None:intergenic
TGCTTATGCTTAATCTTCTT+GGG	0.314327	5.1:-24884736	None:intergenic
GGGTTATTGATTTCCCTGTT+AGG	0.315537	5.1:-24884495	None:intergenic
ATCTTCGTGAAAACCCTAAC+AGG	0.342406	5.1:+24884481	MS.gene44354:CDS
GATGAAGAGTGGATTCCTTC+TGG	0.355259	5.1:-24884657	None:intergenic
CCAGCACCACACTCAGCATT+AGG	0.399166	5.1:-24884838	None:intergenic
TTTATAAGGTTGATGATTCT+GGG	0.414191	5.1:+24884788	MS.gene44354:CDS
GTGGAATTCCTTCCTTATCC+TGG	0.420862	5.1:-24884564	None:intergenic
CCTAATGCTGAGTGTGGTGC+TGG	0.421706	5.1:+24884838	MS.gene44354:CDS
GGTTATTGATTTCCCTGTTA+GGG	0.429898	5.1:-24884494	None:intergenic
GTGTGGTGCTGGAACTTTCA+TGG	0.464899	5.1:+24884849	MS.gene44354:CDS
AAGATAAGACGTTGTTGGTC+CGG	0.466286	5.1:-24884586	None:intergenic
CGGCGAAGATAAGACGTTGT+TGG	0.471359	5.1:-24884591	None:intergenic
AATCTTCTTGGGCTTAGTGT+AGG	0.477063	5.1:-24884725	None:intergenic
CTTGGCTTTCACATTGTCGA+TGG	0.487814	5.1:-24884539	None:intergenic
GAAAGCCAAGATCCAGGATA+AGG	0.514154	5.1:+24884552	MS.gene44354:CDS
CTGGGAAGGTGCAGAGGCTG+AGG	0.516022	5.1:+24884806	MS.gene44354:CDS
TTCCTTCTGGATGTTGTAGT+CGG	0.528293	5.1:-24884644	None:intergenic
CAATGTGAAAGCCAAGATCC+AGG	0.546832	5.1:+24884546	MS.gene44354:CDS
TCCGTGGTGGTGCGAAGAAG+AGG	0.548584	5.1:+24884692	MS.gene44354:CDS
GTCTGAAGATTCAACTTCGA+GGG	0.549043	5.1:-24884515	None:intergenic
GCCGGAAAACAGCTCGAAGA+CGG	0.555312	5.1:+24884610	MS.gene44354:CDS
TAAGGTTGATGATTCTGGGA+AGG	0.571726	5.1:+24884792	MS.gene44354:CDS
TGTCTGAAGATTCAACTTCG+AGG	0.572197	5.1:-24884516	None:intergenic
CGTCATTATTGTGGGAAATG+TGG	0.573413	5.1:+24884886	MS.gene44354:CDS
CAACAACGTCTTATCTTCGC+CGG	0.574971	5.1:+24884592	MS.gene44354:CDS
TCTTCGCACCACCACGGAGA+CGG	0.577038	5.1:-24884687	None:intergenic
AGAAGATTAAGCATAAGCAT+AGG	0.593970	5.1:+24884740	MS.gene44354:CDS
TCCTCTTCTTCGCACCACCA+CGG	0.597995	5.1:-24884693	None:intergenic
CTCGTTCTCCGTCTCCGTGG+TGG	0.599693	5.1:+24884679	MS.gene44354:CDS
ATCAGCTTTCTGATAAACAT+AGG	0.600943	5.1:-24884914	None:intergenic
GATTAAGCATAAGCATAGGA+AGG	0.601776	5.1:+24884744	MS.gene44354:CDS
GAAGGTGCAGAGGCTGAGGA+AGG	0.602387	5.1:+24884810	MS.gene44354:CDS
ACGGAGAACGAGATGAAGAG+TGG	0.604355	5.1:-24884668	None:intergenic
ATAAGACGTTGTTGGTCCGG+TGG	0.605376	5.1:-24884583	None:intergenic
GCCAAGATCCAGGATAAGGA+AGG	0.608413	5.1:+24884556	MS.gene44354:CDS
TGTTGTAGTCGGCGAGAGTG+CGG	0.616851	5.1:-24884633	None:intergenic
ATGATTCTGGGAAGGTGCAG+AGG	0.626218	5.1:+24884800	MS.gene44354:CDS
GGATAAGGAAGGAATTCCAC+CGG	0.633438	5.1:+24884567	MS.gene44354:CDS
CGCCGACTACAACATCCAGA+AGG	0.634733	5.1:+24884642	MS.gene44354:CDS
CATCTCGTTCTCCGTCTCCG+TGG	0.672511	5.1:+24884676	MS.gene44354:CDS
GAGTGTCCTAATGCTGAGTG+TGG	0.690300	5.1:+24884832	MS.gene44354:CDS
TCTTCGTGAAAACCCTAACA+GGG	0.705571	5.1:+24884482	MS.gene44354:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTGATCGTCATTATTGT+GGG	+	chr5.1:24884878-24884897	MS.gene44354:CDS	25.0%
!!!	TTTATAAGGTTGATGATTCT+GGG	+	chr5.1:24884788-24884807	MS.gene44354:CDS	25.0%
!!!	TTTTATAAGGTTGATGATTC+TGG	+	chr5.1:24884787-24884806	MS.gene44354:CDS	25.0%
	AGAAGATTAAGCATAAGCAT+AGG	+	chr5.1:24884740-24884759	MS.gene44354:CDS	30.0%
	ATCAGCTTTCTGATAAACAT+AGG	-	chr5.1:24884917-24884936	None:intergenic	30.0%
	ATGCTTATGCTTAATCTTCT+TGG	-	chr5.1:24884740-24884759	None:intergenic	30.0%
	TGCTTATGCTTAATCTTCTT+GGG	-	chr5.1:24884739-24884758	None:intergenic	30.0%
!!	CATTTTGATCGTCATTATTG+TGG	+	chr5.1:24884877-24884896	MS.gene44354:CDS	30.0%
	GATTAAGCATAAGCATAGGA+AGG	+	chr5.1:24884744-24884763	MS.gene44354:CDS	35.0%
!!	GGTTATTGATTTCCCTGTTA+GGG	-	chr5.1:24884497-24884516	None:intergenic	35.0%
!!	TGCTGTGTTGCAGTTTTATA+AGG	+	chr5.1:24884774-24884793	MS.gene44354:CDS	35.0%
	AAGATAAGACGTTGTTGGTC+CGG	-	chr5.1:24884589-24884608	None:intergenic	40.0%
	AATCTTCTTGGGCTTAGTGT+AGG	-	chr5.1:24884728-24884747	None:intergenic	40.0%
	ATCTTCGTGAAAACCCTAAC+AGG	+	chr5.1:24884481-24884500	MS.gene44354:CDS	40.0%
	CGTCATTATTGTGGGAAATG+TGG	+	chr5.1:24884886-24884905	MS.gene44354:CDS	40.0%
	GTCTGAAGATTCAACTTCGA+GGG	-	chr5.1:24884518-24884537	None:intergenic	40.0%
	TCTTCGTGAAAACCCTAACA+GGG	+	chr5.1:24884482-24884501	MS.gene44354:CDS	40.0%
	TGTCTGAAGATTCAACTTCG+AGG	-	chr5.1:24884519-24884538	None:intergenic	40.0%
	TTCCTTCTGGATGTTGTAGT+CGG	-	chr5.1:24884647-24884666	None:intergenic	40.0%
!!	GGGTTATTGATTTCCCTGTT+AGG	-	chr5.1:24884498-24884517	None:intergenic	40.0%
!!	TAAGGTTGATGATTCTGGGA+AGG	+	chr5.1:24884792-24884811	MS.gene44354:CDS	40.0%
	CAACAACGTCTTATCTTCGC+CGG	+	chr5.1:24884592-24884611	MS.gene44354:CDS	45.0%
	CAATGTGAAAGCCAAGATCC+AGG	+	chr5.1:24884546-24884565	MS.gene44354:CDS	45.0%
	GAAAGCCAAGATCCAGGATA+AGG	+	chr5.1:24884552-24884571	MS.gene44354:CDS	45.0%
	GGATAAGGAAGGAATTCCAC+CGG	+	chr5.1:24884567-24884586	MS.gene44354:CDS	45.0%
	GTGGAATTCCTTCCTTATCC+TGG	-	chr5.1:24884567-24884586	None:intergenic	45.0%
	TCCTTCCTTATCCTGGATCT+TGG	-	chr5.1:24884560-24884579	None:intergenic	45.0%
!	CTTGGCTTTCACATTGTCGA+TGG	-	chr5.1:24884542-24884561	None:intergenic	45.0%
!	GATGAAGAGTGGATTCCTTC+TGG	-	chr5.1:24884660-24884679	None:intergenic	45.0%
	ACGGAGAACGAGATGAAGAG+TGG	-	chr5.1:24884671-24884690	None:intergenic	50.0%
	ATAAGACGTTGTTGGTCCGG+TGG	-	chr5.1:24884586-24884605	None:intergenic	50.0%
	CGGCGAAGATAAGACGTTGT+TGG	-	chr5.1:24884594-24884613	None:intergenic	50.0%
	GAGTGTCCTAATGCTGAGTG+TGG	+	chr5.1:24884832-24884851	MS.gene44354:CDS	50.0%
	GCCAAGATCCAGGATAAGGA+AGG	+	chr5.1:24884556-24884575	MS.gene44354:CDS	50.0%
!	ATGATTCTGGGAAGGTGCAG+AGG	+	chr5.1:24884800-24884819	MS.gene44354:CDS	50.0%
!	GTGTGGTGCTGGAACTTTCA+TGG	+	chr5.1:24884849-24884868	MS.gene44354:CDS	50.0%
	CCAGCACCACACTCAGCATT+AGG	-	chr5.1:24884841-24884860	None:intergenic	55.0%
	CCTAATGCTGAGTGTGGTGC+TGG	+	chr5.1:24884838-24884857	MS.gene44354:CDS	55.0%
	GCCGGAAAACAGCTCGAAGA+CGG	+	chr5.1:24884610-24884629	MS.gene44354:CDS	55.0%
	TCCTCTTCTTCGCACCACCA+CGG	-	chr5.1:24884696-24884715	None:intergenic	55.0%
	TGTTGTAGTCGGCGAGAGTG+CGG	-	chr5.1:24884636-24884655	None:intergenic	55.0%
!	CGCCGACTACAACATCCAGA+AGG	+	chr5.1:24884642-24884661	MS.gene44354:CDS	55.0%
!!	GCCGTCTTCGAGCTGTTTTC+CGG	-	chr5.1:24884614-24884633	None:intergenic	55.0%
	CATCTCGTTCTCCGTCTCCG+TGG	+	chr5.1:24884676-24884695	MS.gene44354:CDS	60.0%
	TCTTCGCACCACCACGGAGA+CGG	-	chr5.1:24884690-24884709	None:intergenic	60.0%
!	GAAGGTGCAGAGGCTGAGGA+AGG	+	chr5.1:24884810-24884829	MS.gene44354:CDS	60.0%
!	TCCGTGGTGGTGCGAAGAAG+AGG	+	chr5.1:24884692-24884711	MS.gene44354:CDS	60.0%
	CTCGTTCTCCGTCTCCGTGG+TGG	+	chr5.1:24884679-24884698	MS.gene44354:CDS	65.0%
!	CTGGGAAGGTGCAGAGGCTG+AGG	+	chr5.1:24884806-24884825	MS.gene44354:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	24884475	24884942	24884475	ID=MS.gene44354
chr5.1	mRNA	24884475	24884942	24884475	ID=MS.gene44354.t1;Parent=MS.gene44354
chr5.1	exon	24884475	24884942	24884475	ID=MS.gene44354.t1.exon1;Parent=MS.gene44354.t1
chr5.1	CDS	24884475	24884942	24884475	ID=cds.MS.gene44354.t1;Parent=MS.gene44354.t1

Gene Sequence

>MS.gene44354

ATGCAGATCTTCGTGAAAACCCTAACAGGGAAATCAATAACCCTCGAAGTTGAATCTTCAGACACCATCGACAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCACCGGACCAACAACGTCTTATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACTCTCGCCGACTACAACATCCAGAAGGAATCCACTCTTCATCTCGTTCTCCGTCTCCGTGGTGGTGCGAAGAAGAGGAAGAAGAAGACCTACACTAAGCCCAAGAAGATTAAGCATAAGCATAGGAAGGTGAAGCTTGCTGTGTTGCAGTTTTATAAGGTTGATGATTCTGGGAAGGTGCAGAGGCTGAGGAAGGAGTGTCCTAATGCTGAGTGTGGTGCTGGAACTTTCATGGCGAATCATTTTGATCGTCATTATTGTGGGAAATGTGGTTTGACCTATGTTTATCAGAAAGCTGATGCTTGA

Protein sequence

>MS.gene44354.t1

MQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKADA