Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82624.t1 | XP_003599947.1 | 99.2 | 377 | 3 | 0 | 1 | 377 | 90 | 466 | 3.40E-215 | 757.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82624.t1 | P14671 | 90.4 | 375 | 36 | 0 | 1 | 375 | 94 | 468 | 3.1e-201 | 702.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82624.t1 | G7J1A1 | 99.2 | 377 | 3 | 0 | 1 | 377 | 90 | 466 | 2.5e-215 | 757.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene82624 | 0.850637 | 1.49E-60 | -1.69E-46 |
| MS.gene04917 | MS.gene82624 | 0.848312 | 6.64E-60 | -1.69E-46 |
| MS.gene050114 | MS.gene82624 | 0.820166 | 7.92E-53 | -1.69E-46 |
| MS.gene050277 | MS.gene82624 | 0.809043 | 2.30E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene82624 | 0.822349 | 2.48E-53 | -1.69E-46 |
| MS.gene050320 | MS.gene82624 | 0.816723 | 4.77E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene82624 | 0.841374 | 4.94E-58 | -1.69E-46 |
| MS.gene051063 | MS.gene82624 | 0.81855 | 1.85E-52 | -1.69E-46 |
| MS.gene051245 | MS.gene82624 | 0.847509 | 1.11E-59 | -1.69E-46 |
| MS.gene051746 | MS.gene82624 | 0.817127 | 3.87E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene82624 | 0.832369 | 9.83E-56 | -1.69E-46 |
| MS.gene051756 | MS.gene82624 | 0.818846 | 1.58E-52 | -1.69E-46 |
| MS.gene051850 | MS.gene82624 | 0.815115 | 1.09E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene82624 | 0.839881 | 1.22E-57 | -1.69E-46 |
| MS.gene052115 | MS.gene82624 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene82624 | 0.800725 | 1.26E-48 | -1.69E-46 |
| MS.gene053109 | MS.gene82624 | 0.853306 | 2.61E-61 | -1.69E-46 |
| MS.gene053167 | MS.gene82624 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene053437 | MS.gene82624 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene054823 | MS.gene82624 | 0.802795 | 4.73E-49 | -1.69E-46 |
| MS.gene055174 | MS.gene82624 | 0.856308 | 3.51E-62 | -1.69E-46 |
| MS.gene055424 | MS.gene82624 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene055441 | MS.gene82624 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene056432 | MS.gene82624 | 0.80869 | 2.74E-50 | -1.69E-46 |
| MS.gene056580 | MS.gene82624 | 0.821859 | 3.23E-53 | -1.69E-46 |
| MS.gene056752 | MS.gene82624 | 0.86137 | 1.08E-63 | -1.69E-46 |
| MS.gene056830 | MS.gene82624 | -0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene82624 | 0.838147 | 3.42E-57 | -1.69E-46 |
| MS.gene057094 | MS.gene82624 | 0.843408 | 1.43E-58 | -1.69E-46 |
| MS.gene057234 | MS.gene82624 | 0.846569 | 2.00E-59 | -1.69E-46 |
| MS.gene057451 | MS.gene82624 | -0.841404 | 4.85E-58 | -1.69E-46 |
| MS.gene057452 | MS.gene82624 | -0.857179 | 1.95E-62 | -1.69E-46 |
| MS.gene057999 | MS.gene82624 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene82624 | 0.811647 | 6.31E-51 | -1.69E-46 |
| MS.gene058055 | MS.gene82624 | 0.834041 | 3.77E-56 | -1.69E-46 |
| MS.gene058074 | MS.gene82624 | 0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene82624 | 0.823058 | 1.70E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene82624 | 0.82851 | 8.64E-55 | -1.69E-46 |
| MS.gene058646 | MS.gene82624 | 0.820347 | 7.20E-53 | -1.69E-46 |
| MS.gene058654 | MS.gene82624 | 0.857757 | 1.31E-62 | -1.69E-46 |
| MS.gene058661 | MS.gene82624 | -0.827063 | 1.92E-54 | -1.69E-46 |
| MS.gene058906 | MS.gene82624 | 0.825057 | 5.77E-54 | -1.69E-46 |
| MS.gene06001 | MS.gene82624 | 0.812274 | 4.60E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene82624 | 0.828859 | 7.11E-55 | -1.69E-46 |
| MS.gene060563 | MS.gene82624 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene060869 | MS.gene82624 | 0.824182 | 9.27E-54 | -1.69E-46 |
| MS.gene061004 | MS.gene82624 | 0.800002 | 1.77E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82624.t1 | MTR_3g049410 | 99.204 | 377 | 3 | 0 | 1 | 377 | 90 | 466 | 0.0 | 774 |
| MS.gene82624.t1 | MTR_3g051120 | 91.247 | 377 | 33 | 0 | 1 | 377 | 36 | 412 | 0.0 | 723 |
| MS.gene82624.t1 | MTR_5g005670 | 64.033 | 367 | 127 | 3 | 7 | 371 | 98 | 461 | 2.70e-168 | 478 |
| MS.gene82624.t1 | MTR_6g016665 | 30.728 | 371 | 209 | 11 | 34 | 376 | 126 | 476 | 5.05e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82624.t1 | AT5G54810 | 89.920 | 377 | 38 | 0 | 1 | 377 | 94 | 470 | 0.0 | 715 |
| MS.gene82624.t1 | AT4G27070 | 89.390 | 377 | 40 | 0 | 1 | 377 | 99 | 475 | 0.0 | 714 |
| MS.gene82624.t1 | AT5G28237 | 64.096 | 376 | 129 | 2 | 1 | 373 | 85 | 457 | 0.0 | 513 |
| MS.gene82624.t1 | AT5G28237 | 62.236 | 331 | 119 | 2 | 1 | 328 | 85 | 412 | 5.38e-154 | 441 |
| MS.gene82624.t1 | AT5G38530 | 31.234 | 381 | 222 | 11 | 19 | 376 | 119 | 482 | 2.49e-32 | 127 |
Find 98 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACAACTCATTACATTT+TGG | 0.139840 | 3.1:-36454072 | MS.gene82624:CDS |
| GCTTTGCTTGCCAAGAAATT+AGG | 0.235803 | 3.1:-36455034 | MS.gene82624:CDS |
| TTATATGGGTGCACAGGATA+TGG | 0.243401 | 3.1:-36454921 | MS.gene82624:CDS |
| TTTGGAATGCATTATTTATA+TGG | 0.271522 | 3.1:-36454936 | MS.gene82624:CDS |
| TCCCTTACCATCATTGGATA+TGG | 0.312779 | 3.1:+36454029 | None:intergenic |
| GACAGTGATGTTAGGCTAAT+TGG | 0.341516 | 3.1:-36453876 | MS.gene82624:CDS |
| CACTGTCATCAACGAATTCA+TGG | 0.351888 | 3.1:+36453892 | None:intergenic |
| GGTGTGGAAGCTGCTGGCTT+TGG | 0.361190 | 3.1:-36453855 | MS.gene82624:CDS |
| ATATGTCCAACCCTTCCTAA+TGG | 0.379833 | 3.1:-36452503 | MS.gene82624:CDS |
| ACACATGCAATCAGAATATC+TGG | 0.395346 | 3.1:+36453945 | None:intergenic |
| TCTTCAAAGCTTCAAGTACT+TGG | 0.395577 | 3.1:+36452424 | None:intergenic |
| TGCTGGAACTGCTACACTTA+AGG | 0.400395 | 3.1:-36454135 | MS.gene82624:CDS |
| TGAAACTCCCTTACCATCAT+TGG | 0.400740 | 3.1:+36454023 | None:intergenic |
| CAAAATAAAGAGGGCTCTCC+CGG | 0.407399 | 3.1:+36455173 | None:intergenic |
| CTTCAGTGGCCGAGGTGATA+AGG | 0.419395 | 3.1:-36452462 | MS.gene82624:CDS |
| TATGTCCAACCCTTCCTAAT+GGG | 0.420563 | 3.1:-36452502 | MS.gene82624:CDS |
| TGTATGTGCTCGGTTTGGTT+TGG | 0.424389 | 3.1:-36454954 | MS.gene82624:CDS |
| TCGTTGATGACAGTGATGTT+AGG | 0.428209 | 3.1:-36453884 | MS.gene82624:CDS |
| AGGGAGTTTCATGCTGTGAT+TGG | 0.429126 | 3.1:-36454011 | MS.gene82624:CDS |
| TTGGAATGCATTATTTATAT+GGG | 0.448483 | 3.1:-36454935 | MS.gene82624:CDS |
| AACTCCATGCTGTCCAGCTC+CGG | 0.450936 | 3.1:+36454988 | None:intergenic |
| AAGCGCATTATTGCTGAAAC+CGG | 0.460771 | 3.1:-36455007 | MS.gene82624:CDS |
| CATCAGAGGCTATTAGAGAC+TGG | 0.462462 | 3.1:-36454106 | MS.gene82624:CDS |
| GGAAGGCATCATTCCAGCTC+TGG | 0.464278 | 3.1:-36452558 | MS.gene82624:CDS |
| GGAAACGAGAAAGCAAGCTT+TGG | 0.468967 | 3.1:-36453985 | MS.gene82624:CDS |
| ATCCATATCCAATGATGGTA+AGG | 0.474992 | 3.1:-36454031 | MS.gene82624:CDS |
| GCTACTGTATGTGCTCGGTT+TGG | 0.475684 | 3.1:-36454959 | MS.gene82624:CDS |
| ACCACGACCTTTGTCCCATT+AGG | 0.479933 | 3.1:+36452488 | None:intergenic |
| CTCTAGATACGCCAGCGCAT+GGG | 0.483251 | 3.1:+36452529 | None:intergenic |
| GAGCCTCACTCTATTAGTGC+AGG | 0.490963 | 3.1:-36453729 | MS.gene82624:CDS |
| AGCTTGGACTACCCTGGTGT+TGG | 0.495536 | 3.1:-36453472 | MS.gene82624:CDS |
| GAGCATTACAAGAACGCTAA+TGG | 0.497923 | 3.1:-36455136 | MS.gene82624:CDS |
| CTAATTGGTGTGGAAGCTGC+TGG | 0.501417 | 3.1:-36453861 | MS.gene82624:CDS |
| TTCTAAAGGACTATGTTGGC+CGG | 0.502934 | 3.1:-36455192 | MS.gene82624:CDS |
| CATTATTTATATGGGTGCAC+AGG | 0.503173 | 3.1:-36454927 | MS.gene82624:CDS |
| CTATGTTCAGGTCCAACACC+AGG | 0.504791 | 3.1:+36453460 | None:intergenic |
| ATTGTTAATCTTATGAGCTC+CGG | 0.508273 | 3.1:+36455069 | None:intergenic |
| CGGTGGAGGTTCAAATGCCA+TGG | 0.509416 | 3.1:-36453922 | MS.gene82624:CDS |
| TTTGTCCCATTAGGAAGGGT+TGG | 0.511932 | 3.1:+36452497 | None:intergenic |
| TGCACAGGATATGGAAAGGC+AGG | 0.514469 | 3.1:-36454912 | MS.gene82624:CDS |
| TCTCTAGATACGCCAGCGCA+TGG | 0.515894 | 3.1:+36452528 | None:intergenic |
| CGACCTTTGTCCCATTAGGA+AGG | 0.518259 | 3.1:+36452492 | None:intergenic |
| AATTGCAGAAAGAGCTGGCT+GGG | 0.522346 | 3.1:-36455216 | MS.gene82624:intron |
| CATCACTGATGATGAAGCAT+TGG | 0.525683 | 3.1:-36453401 | MS.gene82624:CDS |
| GCATGGGATGTCTCCAGAGC+TGG | 0.533225 | 3.1:+36452545 | None:intergenic |
| AACCTTTCCGCAAAATAAAG+AGG | 0.535373 | 3.1:+36455163 | None:intergenic |
| TCTGGAGACATCCCATGCGC+TGG | 0.537792 | 3.1:-36452540 | MS.gene82624:CDS |
| AGCTATGAGCTATCTGCTGC+AGG | 0.544681 | 3.1:-36453772 | MS.gene82624:CDS |
| TCTAAAGGACTATGTTGGCC+GGG | 0.546816 | 3.1:-36455191 | MS.gene82624:CDS |
| GTAGCAGTTCCAGCATGGAC+TGG | 0.548889 | 3.1:+36454143 | None:intergenic |
| CTGATTGCATGTGTCGGTGG+AGG | 0.552969 | 3.1:-36453936 | MS.gene82624:CDS |
| TAGGTGAGACCAGTCCATGC+TGG | 0.554025 | 3.1:-36454152 | MS.gene82624:CDS |
| ATTATTGCTGAAACCGGAGC+TGG | 0.555257 | 3.1:-36455001 | MS.gene82624:CDS |
| ACCATCATTGGATATGGATG+CGG | 0.558386 | 3.1:+36454035 | None:intergenic |
| CCACTGCTACTGTATGTGCT+CGG | 0.559180 | 3.1:-36454964 | MS.gene82624:CDS |
| TCCTAATGGGACAAAGGTCG+TGG | 0.565566 | 3.1:-36452489 | MS.gene82624:CDS |
| GACCTTTGTCCCATTAGGAA+GGG | 0.565868 | 3.1:+36452493 | None:intergenic |
| AAGAGAGTTTCGAGACTGGA+AGG | 0.566294 | 3.1:-36452575 | MS.gene82624:CDS |
| CGGCATGCTTGCCACTGTTG+AGG | 0.567087 | 3.1:+36453832 | None:intergenic |
| AAATTGCAGAAAGAGCTGGC+TGG | 0.571210 | 3.1:-36455217 | MS.gene82624:intron |
| AGAGCTGGCTGGGATTCTAA+AGG | 0.574331 | 3.1:-36455206 | MS.gene82624:CDS |
| ACCGCATCCATATCCAATGA+TGG | 0.574471 | 3.1:-36454036 | MS.gene82624:CDS |
| ATCAGAGGCTATTAGAGACT+GGG | 0.577564 | 3.1:-36454105 | MS.gene82624:CDS |
| GCTGGCTTTGGCCTCAACAG+TGG | 0.578878 | 3.1:-36453843 | MS.gene82624:CDS |
| GACCTCACATTTATCTGAAG+AGG | 0.584547 | 3.1:-36455108 | MS.gene82624:CDS |
| TACAAGAACGCTAATGGTGA+AGG | 0.587462 | 3.1:-36455130 | MS.gene82624:CDS |
| ACCTCACATTTATCTGAAGA+GGG | 0.589104 | 3.1:-36455107 | MS.gene82624:CDS |
| GAAACCGGAGCTGGACAGCA+TGG | 0.591496 | 3.1:-36454992 | MS.gene82624:CDS |
| ACGTTGACGAAGGGAGAAGT+TGG | 0.601188 | 3.1:-36453807 | MS.gene82624:CDS |
| TTCTCCCTTCGTCAACGTAG+CGG | 0.601580 | 3.1:+36453812 | None:intergenic |
| GGGATTCTAAAGGACTATGT+TGG | 0.601837 | 3.1:-36455196 | MS.gene82624:CDS |
| GTGGTTAACTTCAGTGGCCG+AGG | 0.602884 | 3.1:-36452470 | MS.gene82624:CDS |
| TATCTGCTGCAGGATGATGA+TGG | 0.608415 | 3.1:-36453762 | MS.gene82624:CDS |
| GTTTCATGCTGTGATTGGCA+AGG | 0.609226 | 3.1:-36454006 | MS.gene82624:CDS |
| ACCTTTCCGCAAAATAAAGA+GGG | 0.613095 | 3.1:+36455164 | None:intergenic |
| AATGCGTCTTCTTGGTGCTG+AGG | 0.615279 | 3.1:-36454873 | MS.gene82624:intron |
| TCCATATCCAATGATGGTAA+GGG | 0.617371 | 3.1:-36454030 | MS.gene82624:CDS |
| GGTGGAGGTTCAAATGCCAT+GGG | 0.619678 | 3.1:-36453921 | MS.gene82624:CDS |
| TAAGTGTAGCAGTTCCAGCA+TGG | 0.623421 | 3.1:+36454138 | None:intergenic |
| AAGGTCGTGGTTAACTTCAG+TGG | 0.627297 | 3.1:-36452476 | MS.gene82624:CDS |
| ACTGATGATGAAGCATTGGA+AGG | 0.627531 | 3.1:-36453397 | MS.gene82624:intron |
| AACCCTTCCTAATGGGACAA+AGG | 0.627542 | 3.1:-36452495 | MS.gene82624:CDS |
| GCATGCCGCTACGTTGACGA+AGG | 0.630697 | 3.1:-36453817 | MS.gene82624:CDS |
| AGCCTCACTCTATTAGTGCA+GGG | 0.631586 | 3.1:-36453728 | MS.gene82624:intron |
| CCGAGCACATACAGTAGCAG+TGG | 0.634057 | 3.1:+36454964 | None:intergenic |
| GAATTCATGGAAAAGTCCCA+TGG | 0.641266 | 3.1:+36453905 | None:intergenic |
| TAATCTTATGAGCTCCGGTG+TGG | 0.643734 | 3.1:+36455074 | None:intergenic |
| TTTGAACATCCTTATCACCT+CGG | 0.647761 | 3.1:+36452453 | None:intergenic |
| ACTTAAGGATGCTACATCAG+AGG | 0.648351 | 3.1:-36454120 | MS.gene82624:CDS |
| TGATGTTAGGCTAATTGGTG+TGG | 0.654843 | 3.1:-36453871 | MS.gene82624:CDS |
| TACCCTGCACTAATAGAGTG+AGG | 0.656419 | 3.1:+36453726 | None:intergenic |
| TGGGTGCACAGGATATGGAA+AGG | 0.660111 | 3.1:-36454916 | MS.gene82624:CDS |
| CATGCCGCTACGTTGACGAA+GGG | 0.663219 | 3.1:-36453816 | MS.gene82624:CDS |
| ATTCTGATTGCATGTGTCGG+TGG | 0.667659 | 3.1:-36453939 | MS.gene82624:CDS |
| TCCCTCTTCAGATAAATGTG+AGG | 0.679364 | 3.1:+36455106 | None:intergenic |
| GATATTCTGATTGCATGTGT+CGG | 0.681651 | 3.1:-36453942 | MS.gene82624:CDS |
| TATGTTCAGGTCCAACACCA+GGG | 0.698346 | 3.1:+36453461 | None:intergenic |
| AGGGAAGATCTTAACCACAC+CGG | 0.701236 | 3.1:-36455088 | MS.gene82624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTCTTTTTTTTTTTTAA+AGG | + | chr3.1:36453839-36453858 | None:intergenic | 10.0% |
| !!! | TGATAAATTTTTATTTGTTT+TGG | - | chr3.1:36454899-36454918 | MS.gene82624:CDS | 10.0% |
| !! | ATTTATTTGTAAAAAAAGCT+TGG | - | chr3.1:36454281-36454300 | MS.gene82624:intron | 15.0% |
| !! | CTTACATAAGTTATTTATAT+AGG | - | chr3.1:36452768-36452787 | MS.gene82624:intron | 15.0% |
| !! | TATTGTACATCAAAATAATA+AGG | + | chr3.1:36453013-36453032 | None:intergenic | 15.0% |
| !! | TTTGTTGAAAGAAAAAAAAA+TGG | - | chr3.1:36453803-36453822 | MS.gene82624:CDS | 15.0% |
| !!! | ACATTTTATATGATGAAAAT+TGG | + | chr3.1:36455876-36455895 | None:intergenic | 15.0% |
| !!! | TTATTTTGATGTACAATATT+TGG | - | chr3.1:36453015-36453034 | MS.gene82624:intron | 15.0% |
| !!! | TTTTTATAAAGCTGATTTTA+TGG | - | chr3.1:36453315-36453334 | MS.gene82624:intron | 15.0% |
| !!! | TTTTTTGATATGTAATTTGA+TGG | - | chr3.1:36453276-36453295 | MS.gene82624:intron | 15.0% |
| !! | TTATATGATGAAAATTGGAA+AGG | + | chr3.1:36455871-36455890 | None:intergenic | 20.0% |
| !! | TTGGAATGCATTATTTATAT+GGG | - | chr3.1:36453656-36453675 | MS.gene82624:intron | 20.0% |
| !!! | AAAAATATTGTTTTGTAGCT+TGG | - | chr3.1:36455103-36455122 | MS.gene82624:CDS | 20.0% |
| !!! | ATGAGTTTTGTTTTCAATTT+TGG | - | chr3.1:36452599-36452618 | MS.gene82624:intron | 20.0% |
| !!! | ATTTGTTTAATTTGCAATGT+TGG | - | chr3.1:36452553-36452572 | MS.gene82624:CDS | 20.0% |
| !!! | GTTTTTATTTATTGACTGTT+TGG | - | chr3.1:36452697-36452716 | MS.gene82624:intron | 20.0% |
| !!! | TAAGTTTTTTGATTTTGTGA+AGG | - | chr3.1:36452507-36452526 | MS.gene82624:CDS | 20.0% |
| !!! | TTCTAAGTGTTTTTAAATAG+TGG | - | chr3.1:36455604-36455623 | MS.gene82624:intron | 20.0% |
| !!! | TTTGGAATGCATTATTTATA+TGG | - | chr3.1:36453655-36453674 | MS.gene82624:intron | 20.0% |
| !!! | TTTGTTTAATTTGCAATGTT+GGG | - | chr3.1:36452554-36452573 | MS.gene82624:CDS | 20.0% |
| !!! | TTTTATTACATTGTTCATAC+AGG | - | chr3.1:36454308-36454327 | MS.gene82624:intron | 20.0% |
| ! | AAATAGAAGGGAAGAAAAAA+AGG | + | chr3.1:36453051-36453070 | None:intergenic | 25.0% |
| ! | ACAAACCAGATACTAAATAT+AGG | + | chr3.1:36453788-36453807 | None:intergenic | 25.0% |
| ! | ACTAATTGATTGTTGAAATG+TGG | - | chr3.1:36452650-36452669 | MS.gene82624:intron | 25.0% |
| ! | ATAAATTAGATTAGAGTAGC+TGG | + | chr3.1:36455968-36455987 | None:intergenic | 25.0% |
| ! | ATATGAAATATAAGTCCTGA+TGG | - | chr3.1:36455788-36455807 | MS.gene82624:intron | 25.0% |
| ! | ATTACAAATGCTAGAAGTAA+TGG | + | chr3.1:36454219-36454238 | None:intergenic | 25.0% |
| ! | CAATAGTTGAAGAAATAGAA+GGG | + | chr3.1:36453063-36453082 | None:intergenic | 25.0% |
| ! | CATGATTTCATATGAATTGA+AGG | - | chr3.1:36453879-36453898 | MS.gene82624:CDS | 25.0% |
| ! | GTAAAACTTACACAGAATAA+GGG | + | chr3.1:36455480-36455499 | None:intergenic | 25.0% |
| ! | TAGAAACCAAAAACAACTTA+GGG | + | chr3.1:36453953-36453972 | None:intergenic | 25.0% |
| ! | TATGAAATATAAGTCCTGAT+GGG | - | chr3.1:36455789-36455808 | MS.gene82624:intron | 25.0% |
| ! | TATTACATGATTGCAGATAT+AGG | - | chr3.1:36455243-36455262 | MS.gene82624:intron | 25.0% |
| ! | TCAATAGTTGAAGAAATAGA+AGG | + | chr3.1:36453064-36453083 | None:intergenic | 25.0% |
| ! | TGTAAAACTTACACAGAATA+AGG | + | chr3.1:36455481-36455500 | None:intergenic | 25.0% |
| ! | TGTATCCTATATTTAGTATC+TGG | - | chr3.1:36453780-36453799 | MS.gene82624:CDS | 25.0% |
| ! | TTACAAATGCTAGAAGTAAT+GGG | + | chr3.1:36454218-36454237 | None:intergenic | 25.0% |
| ! | TTTGTATAGTCGAGTATTAT+TGG | + | chr3.1:36453236-36453255 | None:intergenic | 25.0% |
| !! | ATTGTTATTGTTGTTCCATT+TGG | - | chr3.1:36453748-36453767 | MS.gene82624:CDS | 25.0% |
| !! | GAAACAACTCATTACATTTT+GGG | - | chr3.1:36454520-36454539 | MS.gene82624:intron | 25.0% |
| !! | TGAAACAACTCATTACATTT+TGG | - | chr3.1:36454519-36454538 | MS.gene82624:intron | 25.0% |
| !!! | CTTTGTTTCAAAACATTTTG+TGG | - | chr3.1:36455912-36455931 | MS.gene82624:intron | 25.0% |
| !!! | TGGACTATTTTTGTTTTAGT+TGG | - | chr3.1:36452619-36452638 | MS.gene82624:intron | 25.0% |
| ACCAAATCATGACAACTAAA+TGG | + | chr3.1:36455312-36455331 | None:intergenic | 30.0% | |
| ATCAATTACACGGATAACAT+AGG | + | chr3.1:36455436-36455455 | None:intergenic | 30.0% | |
| ATGAAATATAAGTCCTGATG+GGG | - | chr3.1:36455790-36455809 | MS.gene82624:intron | 30.0% | |
| ATGGGGAACATATATAACTA+GGG | - | chr3.1:36455807-36455826 | MS.gene82624:intron | 30.0% | |
| ATTGTTAATCTTATGAGCTC+CGG | + | chr3.1:36453525-36453544 | None:intergenic | 30.0% | |
| CTACGATATCACATAAAAGA+CGG | + | chr3.1:36455720-36455739 | None:intergenic | 30.0% | |
| GATACATCAACTAAACCAAA+TGG | + | chr3.1:36453766-36453785 | None:intergenic | 30.0% | |
| GGTCAACAATTATTTCAACT+AGG | - | chr3.1:36454993-36455012 | MS.gene82624:CDS | 30.0% | |
| GTAGAAACCAAAAACAACTT+AGG | + | chr3.1:36453954-36453973 | None:intergenic | 30.0% | |
| GTATACTTGCATCTAAAGAT+TGG | + | chr3.1:36455743-36455762 | None:intergenic | 30.0% | |
| GTATCTAAATCCTGTGATAT+AGG | - | chr3.1:36454420-36454439 | MS.gene82624:intron | 30.0% | |
| TACAAATGCTAGAAGTAATG+GGG | + | chr3.1:36454217-36454236 | None:intergenic | 30.0% | |
| TCTTTCAAAAAGCTATGTTC+AGG | + | chr3.1:36455146-36455165 | None:intergenic | 30.0% | |
| TGTATGAAGTGTAAATTCCA+TGG | - | chr3.1:36455278-36455297 | MS.gene82624:intron | 30.0% | |
| TGTGTATCGCAAAAAAATAG+TGG | + | chr3.1:36455578-36455597 | None:intergenic | 30.0% | |
| TTAAAAAAGCCAATCCAAAC+AGG | - | chr3.1:36452959-36452978 | MS.gene82624:intron | 30.0% | |
| TTACAGGAAGATCAATTACA+CGG | + | chr3.1:36455446-36455465 | None:intergenic | 30.0% | |
| ! | TCTTTATCTAGCATTGAACA+AGG | - | chr3.1:36454339-36454358 | MS.gene82624:intron | 30.0% |
| ! | TTTTAAATTGCAGAAAGAGC+TGG | - | chr3.1:36453370-36453389 | MS.gene82624:intron | 30.0% |
| !! | AAAGCAAGCTTTGGAAAAAT+GGG | - | chr3.1:36454615-36454634 | MS.gene82624:intron | 30.0% |
| !! | ACATAGCTTTTTGAAAGACT+TGG | - | chr3.1:36455148-36455167 | MS.gene82624:CDS | 30.0% |
| !! | ATAGCTTTTTGAAAGACTTG+GGG | - | chr3.1:36455150-36455169 | MS.gene82624:CDS | 30.0% |
| !! | CATAGCTTTTTGAAAGACTT+GGG | - | chr3.1:36455149-36455168 | MS.gene82624:CDS | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr3.1:36452833-36452852 | MS.gene82624:intron | 30.0% |
| !!! | ATTTTGTGAAGGTGTTTTCT+TGG | - | chr3.1:36452518-36452537 | MS.gene82624:CDS | 30.0% |
| AACCTTTCCGCAAAATAAAG+AGG | + | chr3.1:36453431-36453450 | None:intergenic | 35.0% | |
| AAGGGCAAGGAAAAAATTAC+AGG | + | chr3.1:36455462-36455481 | None:intergenic | 35.0% | |
| ACACATGCAATCAGAATATC+TGG | + | chr3.1:36454649-36454668 | None:intergenic | 35.0% | |
| ACATAAAAGACGGTAATTGC+TGG | + | chr3.1:36455710-36455729 | None:intergenic | 35.0% | |
| ACATCAATTGCAAGCTGTAA+TGG | + | chr3.1:36454074-36454093 | None:intergenic | 35.0% | |
| ACCTCACATTTATCTGAAGA+GGG | - | chr3.1:36453484-36453503 | MS.gene82624:intron | 35.0% | |
| ACCTTTCCGCAAAATAAAGA+GGG | + | chr3.1:36453430-36453449 | None:intergenic | 35.0% | |
| AGTTATATATGTTCCCCATC+AGG | + | chr3.1:36455806-36455825 | None:intergenic | 35.0% | |
| ATCCATATCCAATGATGGTA+AGG | - | chr3.1:36454560-36454579 | MS.gene82624:intron | 35.0% | |
| CAGGTAAAGTTGAATCAATC+TGG | + | chr3.1:36455036-36455055 | None:intergenic | 35.0% | |
| CATTATTTATATGGGTGCAC+AGG | - | chr3.1:36453664-36453683 | MS.gene82624:intron | 35.0% | |
| CCAAAAACAACTTAGGGAAA+TGG | + | chr3.1:36453947-36453966 | None:intergenic | 35.0% | |
| CTAAATCTAAATCATCAGCC+AGG | + | chr3.1:36455055-36455074 | None:intergenic | 35.0% | |
| GATATTCTGATTGCATGTGT+CGG | - | chr3.1:36454649-36454668 | MS.gene82624:intron | 35.0% | |
| GATGGGGAACATATATAACT+AGG | - | chr3.1:36455806-36455825 | MS.gene82624:intron | 35.0% | |
| GCATAACTGTTGTCAAATAG+TGG | - | chr3.1:36455526-36455545 | MS.gene82624:intron | 35.0% | |
| GCCATTTAGTTGTCATGATT+TGG | - | chr3.1:36455308-36455327 | MS.gene82624:intron | 35.0% | |
| TCCATATCCAATGATGGTAA+GGG | - | chr3.1:36454561-36454580 | MS.gene82624:intron | 35.0% | |
| TTTGAACATCCTTATCACCT+CGG | + | chr3.1:36456141-36456160 | None:intergenic | 35.0% | |
| TTTGACTAATTGTAGCATCG+AGG | - | chr3.1:36454243-36454262 | MS.gene82624:intron | 35.0% | |
| ! | AAGTTTTACACAGACTGATG+TGG | - | chr3.1:36455491-36455510 | MS.gene82624:intron | 35.0% |
| ! | AATGTGGCACTGAAATTGAT+TGG | - | chr3.1:36452666-36452685 | MS.gene82624:intron | 35.0% |
| ! | ATATGAATTGAAGGTGTGTC+CGG | - | chr3.1:36453888-36453907 | MS.gene82624:CDS | 35.0% |
| ! | CAGATTGATTCAACTTTACC+TGG | - | chr3.1:36455034-36455053 | MS.gene82624:CDS | 35.0% |
| !! | AAGCAAGCTTTGGAAAAATG+GGG | - | chr3.1:36454616-36454635 | MS.gene82624:intron | 35.0% |
| !! | CCATTTCCCTAAGTTGTTTT+TGG | - | chr3.1:36453944-36453963 | MS.gene82624:CDS | 35.0% |
| !! | GAAAGCAAGCTTTGGAAAAA+TGG | - | chr3.1:36454614-36454633 | MS.gene82624:intron | 35.0% |
| !! | TTATTTTGCGGAAAGGTTGA+CGG | - | chr3.1:36453433-36453452 | MS.gene82624:CDS | 35.0% |
| !! | TTGCTGGTTTCTCAATTTAG+CGG | + | chr3.1:36455694-36455713 | None:intergenic | 35.0% |
| !! | TTTTAAGAGAGTTTCGAGAC+TGG | - | chr3.1:36456012-36456031 | MS.gene82624:intron | 35.0% |
| !!! | GAACAAACCGCTATTTTTTG+CGG | - | chr3.1:36455667-36455686 | MS.gene82624:intron | 35.0% |
| !!! | TGAAGGTGTTTTCTTGGATT+TGG | - | chr3.1:36452524-36452543 | MS.gene82624:CDS | 35.0% |
| !!! | TTGTTTTGGTTTTAACCCTC+TGG | - | chr3.1:36454913-36454932 | MS.gene82624:CDS | 35.0% |
| AACTATGCCAATGCAAAGGA+AGG | + | chr3.1:36455342-36455361 | None:intergenic | 40.0% | |
| AAGCGCATTATTGCTGAAAC+CGG | - | chr3.1:36453584-36453603 | MS.gene82624:intron | 40.0% | |
| ACCAGACTTTACATACCTTG+GGG | + | chr3.1:36454976-36454995 | None:intergenic | 40.0% | |
| ACCATCATTGGATATGGATG+CGG | + | chr3.1:36454559-36454578 | None:intergenic | 40.0% | |
| ACTAAATGGCAAGAGATCCA+TGG | + | chr3.1:36455298-36455317 | None:intergenic | 40.0% | |
| ACTTAAGGATGCTACATCAG+AGG | - | chr3.1:36454471-36454490 | MS.gene82624:intron | 40.0% | |
| ACTTACACAGAATAAGGGCA+AGG | + | chr3.1:36455475-36455494 | None:intergenic | 40.0% | |
| ATATGTCCAACCCTTCCTAA+TGG | - | chr3.1:36456088-36456107 | MS.gene82624:intron | 40.0% | |
| ATCAGAGGCTATTAGAGACT+GGG | - | chr3.1:36454486-36454505 | MS.gene82624:intron | 40.0% | |
| CACTGTCATCAACGAATTCA+TGG | + | chr3.1:36454702-36454721 | None:intergenic | 40.0% | |
| GAATTCATGGAAAAGTCCCA+TGG | + | chr3.1:36454689-36454708 | None:intergenic | 40.0% | |
| GACACAAGATTGATACTGAC+AGG | + | chr3.1:36453976-36453995 | None:intergenic | 40.0% | |
| GACAGTGATGTTAGGCTAAT+TGG | - | chr3.1:36454715-36454734 | MS.gene82624:intron | 40.0% | |
| GACCAGACTTTACATACCTT+GGG | + | chr3.1:36454977-36454996 | None:intergenic | 40.0% | |
| GACCTCACATTTATCTGAAG+AGG | - | chr3.1:36453483-36453502 | MS.gene82624:intron | 40.0% | |
| GAGCATTACAAGAACGCTAA+TGG | - | chr3.1:36453455-36453474 | MS.gene82624:CDS | 40.0% | |
| GCTTTGCTTGCCAAGAAATT+AGG | - | chr3.1:36453557-36453576 | MS.gene82624:intron | 40.0% | |
| GGGAAATGGAAGTGATTGAA+AGG | + | chr3.1:36453933-36453952 | None:intergenic | 40.0% | |
| TAACCACATGTGTCATACAC+CGG | + | chr3.1:36453910-36453929 | None:intergenic | 40.0% | |
| TACAAGAACGCTAATGGTGA+AGG | - | chr3.1:36453461-36453480 | MS.gene82624:CDS | 40.0% | |
| TATGTCCAACCCTTCCTAAT+GGG | - | chr3.1:36456089-36456108 | MS.gene82624:intron | 40.0% | |
| TCCCTCTTCAGATAAATGTG+AGG | + | chr3.1:36453488-36453507 | None:intergenic | 40.0% | |
| TCCCTTACCATCATTGGATA+TGG | + | chr3.1:36454565-36454584 | None:intergenic | 40.0% | |
| TGAAACTCCCTTACCATCAT+TGG | + | chr3.1:36454571-36454590 | None:intergenic | 40.0% | |
| TGACCAGACTTTACATACCT+TGG | + | chr3.1:36454978-36454997 | None:intergenic | 40.0% | |
| TGATGTTAGGCTAATTGGTG+TGG | - | chr3.1:36454720-36454739 | MS.gene82624:intron | 40.0% | |
| TTATATGGGTGCACAGGATA+TGG | - | chr3.1:36453670-36453689 | MS.gene82624:intron | 40.0% | |
| TTCCTTTCCTTCCTTTGCAT+TGG | - | chr3.1:36455332-36455351 | MS.gene82624:intron | 40.0% | |
| TTTCAACTAGGATCCGATCT+CGG | - | chr3.1:36455005-36455024 | MS.gene82624:CDS | 40.0% | |
| ! | CATCACTGATGATGAAGCAT+TGG | - | chr3.1:36455190-36455209 | MS.gene82624:CDS | 40.0% |
| ! | GGGATTCTAAAGGACTATGT+TGG | - | chr3.1:36453395-36453414 | MS.gene82624:intron | 40.0% |
| ! | GTTTTCAGAATGCGTCTTCT+TGG | - | chr3.1:36453710-36453729 | MS.gene82624:intron | 40.0% |
| ! | TGCTGCTGATGAAGATTTTC+AGG | - | chr3.1:36452468-36452487 | MS.gene82624:CDS | 40.0% |
| ! | TTCTAAAGGACTATGTTGGC+CGG | - | chr3.1:36453399-36453418 | MS.gene82624:CDS | 40.0% |
| !! | AAGCTTTGGAAAAATGGGGA+GGG | - | chr3.1:36454620-36454639 | MS.gene82624:intron | 40.0% |
| !! | ACTGATGATGAAGCATTGGA+AGG | - | chr3.1:36455194-36455213 | MS.gene82624:CDS | 40.0% |
| !! | GAAGACAATAAGCTGGCTTT+AGG | - | chr3.1:36454018-36454037 | MS.gene82624:CDS | 40.0% |
| !! | GCGCTTTTTGCCTAATTTCT+TGG | + | chr3.1:36453570-36453589 | None:intergenic | 40.0% |
| !! | TCGTTGATGACAGTGATGTT+AGG | - | chr3.1:36454707-36454726 | MS.gene82624:intron | 40.0% |
| !! | TTTAACCCTCTGGTTCTCAA+GGG | - | chr3.1:36454923-36454942 | MS.gene82624:CDS | 40.0% |
| !!! | TACATTTTGGGATCTGTTGC+TGG | - | chr3.1:36454532-36454551 | MS.gene82624:intron | 40.0% |
| !!! | TTTTAACCCTCTGGTTCTCA+AGG | - | chr3.1:36454922-36454941 | MS.gene82624:CDS | 40.0% |
| AAATTGCAGAAAGAGCTGGC+TGG | - | chr3.1:36453374-36453393 | MS.gene82624:intron | 45.0% | |
| AACCCTTCCTAATGGGACAA+AGG | - | chr3.1:36456096-36456115 | MS.gene82624:intron | 45.0% | |
| AAGAGAGTTTCGAGACTGGA+AGG | - | chr3.1:36456016-36456035 | MS.gene82624:intron | 45.0% | |
| AAGGTCGTGGTTAACTTCAG+TGG | - | chr3.1:36456115-36456134 | MS.gene82624:intron | 45.0% | |
| AATCCAAACAGGCCCTTATG+TGG | - | chr3.1:36452970-36452989 | MS.gene82624:intron | 45.0% | |
| AATCCTTCGCCTCCACATAA+GGG | + | chr3.1:36452985-36453004 | None:intergenic | 45.0% | |
| AATTGCAGAAAGAGCTGGCT+GGG | - | chr3.1:36453375-36453394 | MS.gene82624:intron | 45.0% | |
| ACAGGCTGAAGACAATAAGC+TGG | - | chr3.1:36454011-36454030 | MS.gene82624:CDS | 45.0% | |
| ACATAAGGGCCTGTTTGGAT+TGG | + | chr3.1:36452971-36452990 | None:intergenic | 45.0% | |
| ACCGCATCCATATCCAATGA+TGG | - | chr3.1:36454555-36454574 | MS.gene82624:intron | 45.0% | |
| ACTGATGTGGTCTAGGTAGA+TGG | - | chr3.1:36455504-36455523 | MS.gene82624:intron | 45.0% | |
| AGCCTCACTCTATTAGTGCA+GGG | - | chr3.1:36454863-36454882 | MS.gene82624:intron | 45.0% | |
| AGGGAAGATCTTAACCACAC+CGG | - | chr3.1:36453503-36453522 | MS.gene82624:intron | 45.0% | |
| AGGGAGTTTCATGCTGTGAT+TGG | - | chr3.1:36454580-36454599 | MS.gene82624:intron | 45.0% | |
| ATTATTGCTGAAACCGGAGC+TGG | - | chr3.1:36453590-36453609 | MS.gene82624:intron | 45.0% | |
| ATTCTGATTGCATGTGTCGG+TGG | - | chr3.1:36454652-36454671 | MS.gene82624:intron | 45.0% | |
| CAAAATAAAGAGGGCTCTCC+CGG | + | chr3.1:36453421-36453440 | None:intergenic | 45.0% | |
| CATCAGAGGCTATTAGAGAC+TGG | - | chr3.1:36454485-36454504 | MS.gene82624:intron | 45.0% | |
| GACCTTTGTCCCATTAGGAA+GGG | + | chr3.1:36456101-36456120 | None:intergenic | 45.0% | |
| GATCCCTCCTCTAGTTACAT+GGG | + | chr3.1:36453108-36453127 | None:intergenic | 45.0% | |
| GCACAACTATGCCAATGCAA+AGG | + | chr3.1:36455346-36455365 | None:intergenic | 45.0% | |
| GGAAACGAGAAAGCAAGCTT+TGG | - | chr3.1:36454606-36454625 | MS.gene82624:intron | 45.0% | |
| GGGCCAAACTCCATATTACT+AGG | + | chr3.1:36454956-36454975 | None:intergenic | 45.0% | |
| GGGCCTAGTAATATGGAGTT+TGG | - | chr3.1:36454950-36454969 | MS.gene82624:CDS | 45.0% | |
| GTAGTCACCCATGTAACTAG+AGG | - | chr3.1:36453098-36453117 | MS.gene82624:intron | 45.0% | |
| GTCTAGTGTCTGTACTTCAC+AGG | - | chr3.1:36453993-36454012 | MS.gene82624:CDS | 45.0% | |
| GTTTCATGCTGTGATTGGCA+AGG | - | chr3.1:36454585-36454604 | MS.gene82624:intron | 45.0% | |
| TAAGTGTAGCAGTTCCAGCA+TGG | + | chr3.1:36454456-36454475 | None:intergenic | 45.0% | |
| TAATATGGAGTTTGGCCCCA+AGG | - | chr3.1:36454958-36454977 | MS.gene82624:CDS | 45.0% | |
| TAATCTTATGAGCTCCGGTG+TGG | + | chr3.1:36453520-36453539 | None:intergenic | 45.0% | |
| TACACAGACTGATGTGGTCT+AGG | - | chr3.1:36455497-36455516 | MS.gene82624:intron | 45.0% | |
| TACCCTGCACTAATAGAGTG+AGG | + | chr3.1:36454868-36454887 | None:intergenic | 45.0% | |
| TATCTGCTGCAGGATGATGA+TGG | - | chr3.1:36454829-36454848 | MS.gene82624:intron | 45.0% | |
| TATGTTCAGGTCCAACACCA+GGG | + | chr3.1:36455133-36455152 | None:intergenic | 45.0% | |
| TCACCCATGTAACTAGAGGA+GGG | - | chr3.1:36453102-36453121 | MS.gene82624:intron | 45.0% | |
| TCTAAAGGACTATGTTGGCC+GGG | - | chr3.1:36453400-36453419 | MS.gene82624:CDS | 45.0% | |
| TGATCCCTCCTCTAGTTACA+TGG | + | chr3.1:36453109-36453128 | None:intergenic | 45.0% | |
| TGCCAATGCAAAGGAAGGAA+AGG | + | chr3.1:36455337-36455356 | None:intergenic | 45.0% | |
| TGCTGGAACTGCTACACTTA+AGG | - | chr3.1:36454456-36454475 | MS.gene82624:intron | 45.0% | |
| TTCAACTAGGATCCGATCTC+GGG | - | chr3.1:36455006-36455025 | MS.gene82624:CDS | 45.0% | |
| TTTGTCCCATTAGGAAGGGT+TGG | + | chr3.1:36456097-36456116 | None:intergenic | 45.0% | |
| ! | ACTGGTCTCACCTATATCAC+AGG | + | chr3.1:36454433-36454452 | None:intergenic | 45.0% |
| ! | TAGCGGACCGCAAAAAATAG+CGG | + | chr3.1:36455677-36455696 | None:intergenic | 45.0% |
| ! | TTTTGTAGCTTGGACTACCC+TGG | - | chr3.1:36455113-36455132 | MS.gene82624:CDS | 45.0% |
| !! | CAAGCTTTGGAAAAATGGGG+AGG | - | chr3.1:36454619-36454638 | MS.gene82624:intron | 45.0% |
| !! | TATAGAAGCACTGCACGTAG+CGG | - | chr3.1:36455639-36455658 | MS.gene82624:intron | 45.0% |
| !! | TGTATGTGCTCGGTTTGGTT+TGG | - | chr3.1:36453637-36453656 | MS.gene82624:intron | 45.0% |
| !!! | GCCCTCTTTATTTTGCGGAA+AGG | - | chr3.1:36453426-36453445 | MS.gene82624:CDS | 45.0% |
| !!! | GGAGAAGTTGGTGTTTTGCA+TGG | - | chr3.1:36454796-36454815 | MS.gene82624:intron | 45.0% |
| !!! | GGAGAGCCCTCTTTATTTTG+CGG | - | chr3.1:36453421-36453440 | MS.gene82624:CDS | 45.0% |
| ACCACGACCTTTGTCCCATT+AGG | + | chr3.1:36456106-36456125 | None:intergenic | 50.0% | |
| ACGTTGACGAAGGGAGAAGT+TGG | - | chr3.1:36454784-36454803 | MS.gene82624:intron | 50.0% | |
| AGAGCTGGCTGGGATTCTAA+AGG | - | chr3.1:36453385-36453404 | MS.gene82624:intron | 50.0% | |
| AGCTATGAGCTATCTGCTGC+AGG | - | chr3.1:36454819-36454838 | MS.gene82624:intron | 50.0% | |
| CAATCCTTCGCCTCCACATA+AGG | + | chr3.1:36452986-36453005 | None:intergenic | 50.0% | |
| CCACTGCTACTGTATGTGCT+CGG | - | chr3.1:36453627-36453646 | MS.gene82624:intron | 50.0% | |
| CCTTTCCCTTGAGAACCAGA+GGG | + | chr3.1:36454931-36454950 | None:intergenic | 50.0% | |
| CGACCTTTGTCCCATTAGGA+AGG | + | chr3.1:36456102-36456121 | None:intergenic | 50.0% | |
| CTAATTGGTGTGGAAGCTGC+TGG | - | chr3.1:36454730-36454749 | MS.gene82624:intron | 50.0% | |
| CTATGTTCAGGTCCAACACC+AGG | + | chr3.1:36455134-36455153 | None:intergenic | 50.0% | |
| GAGCCTCACTCTATTAGTGC+AGG | - | chr3.1:36454862-36454881 | MS.gene82624:intron | 50.0% | |
| GCCCCAAGGTATGTAAAGTC+TGG | - | chr3.1:36454972-36454991 | MS.gene82624:CDS | 50.0% | |
| GCTACTGTATGTGCTCGGTT+TGG | - | chr3.1:36453632-36453651 | MS.gene82624:intron | 50.0% | |
| GGGAAAGGGGCCTAGTAATA+TGG | - | chr3.1:36454943-36454962 | MS.gene82624:CDS | 50.0% | |
| GGTGGAGGTTCAAATGCCAT+GGG | - | chr3.1:36454670-36454689 | MS.gene82624:intron | 50.0% | |
| GTCACCCATGTAACTAGAGG+AGG | - | chr3.1:36453101-36453120 | MS.gene82624:intron | 50.0% | |
| TCCTAATGGGACAAAGGTCG+TGG | - | chr3.1:36456102-36456121 | MS.gene82624:intron | 50.0% | |
| TGCACAGGATATGGAAAGGC+AGG | - | chr3.1:36453679-36453698 | MS.gene82624:intron | 50.0% | |
| TGGGTGCACAGGATATGGAA+AGG | - | chr3.1:36453675-36453694 | MS.gene82624:intron | 50.0% | |
| TGTCCGGTGTATGACACATG+TGG | - | chr3.1:36453904-36453923 | MS.gene82624:CDS | 50.0% | |
| TTCTCCCTTCGTCAACGTAG+CGG | + | chr3.1:36454782-36454801 | None:intergenic | 50.0% | |
| ! | CAATCTGGAGTACCCGAGAT+CGG | + | chr3.1:36455021-36455040 | None:intergenic | 50.0% |
| !! | AATGCGTCTTCTTGGTGCTG+AGG | - | chr3.1:36453718-36453737 | MS.gene82624:intron | 50.0% |
| !! | CCTCTGGTTCTCAAGGGAAA+GGG | - | chr3.1:36454929-36454948 | MS.gene82624:CDS | 50.0% |
| !! | CTCTGGTTCTCAAGGGAAAG+GGG | - | chr3.1:36454930-36454949 | MS.gene82624:CDS | 50.0% |
| AACTCCATGCTGTCCAGCTC+CGG | + | chr3.1:36453606-36453625 | None:intergenic | 55.0% | |
| AGCTTGGACTACCCTGGTGT+TGG | - | chr3.1:36455119-36455138 | MS.gene82624:CDS | 55.0% | |
| CATGCCGCTACGTTGACGAA+GGG | - | chr3.1:36454775-36454794 | MS.gene82624:intron | 55.0% | |
| CCAAACAGGCCCTTATGTGG+AGG | - | chr3.1:36452973-36452992 | MS.gene82624:intron | 55.0% | |
| CCCTTTCCCTTGAGAACCAG+AGG | + | chr3.1:36454932-36454951 | None:intergenic | 55.0% | |
| CCGAGCACATACAGTAGCAG+TGG | + | chr3.1:36453630-36453649 | None:intergenic | 55.0% | |
| CCTCCACATAAGGGCCTGTT+TGG | + | chr3.1:36452976-36452995 | None:intergenic | 55.0% | |
| CGGTGGAGGTTCAAATGCCA+TGG | - | chr3.1:36454669-36454688 | MS.gene82624:intron | 55.0% | |
| CTCTAGATACGCCAGCGCAT+GGG | + | chr3.1:36456065-36456084 | None:intergenic | 55.0% | |
| CTTCAGTGGCCGAGGTGATA+AGG | - | chr3.1:36456129-36456148 | MS.gene82624:CDS | 55.0% | |
| GTAGCAGTTCCAGCATGGAC+TGG | + | chr3.1:36454451-36454470 | None:intergenic | 55.0% | |
| GTGGTTAACTTCAGTGGCCG+AGG | - | chr3.1:36456121-36456140 | MS.gene82624:intron | 55.0% | |
| TAGGTGAGACCAGTCCATGC+TGG | - | chr3.1:36454439-36454458 | MS.gene82624:intron | 55.0% | |
| TCTCTAGATACGCCAGCGCA+TGG | + | chr3.1:36456066-36456085 | None:intergenic | 55.0% | |
| ! | CTGATTGCATGTGTCGGTGG+AGG | - | chr3.1:36454655-36454674 | MS.gene82624:intron | 55.0% |
| !! | CCCTCTGGTTCTCAAGGGAA+AGG | - | chr3.1:36454928-36454947 | MS.gene82624:CDS | 55.0% |
| !! | GGAAGGCATCATTCCAGCTC+TGG | - | chr3.1:36456033-36456052 | MS.gene82624:intron | 55.0% |
| AGGCCCTTATGTGGAGGCGA+AGG | - | chr3.1:36452979-36452998 | MS.gene82624:intron | 60.0% | |
| CGGCATGCTTGCCACTGTTG+AGG | + | chr3.1:36454762-36454781 | None:intergenic | 60.0% | |
| GAAACCGGAGCTGGACAGCA+TGG | - | chr3.1:36453599-36453618 | MS.gene82624:intron | 60.0% | |
| GCATGCCGCTACGTTGACGA+AGG | - | chr3.1:36454774-36454793 | MS.gene82624:intron | 60.0% | |
| GCATGGGATGTCTCCAGAGC+TGG | + | chr3.1:36456049-36456068 | None:intergenic | 60.0% | |
| TCTGGAGACATCCCATGCGC+TGG | - | chr3.1:36456051-36456070 | MS.gene82624:intron | 60.0% | |
| !! | GCTGGCTTTGGCCTCAACAG+TGG | - | chr3.1:36454748-36454767 | MS.gene82624:intron | 60.0% |
| !! | GGTGTGGAAGCTGCTGGCTT+TGG | - | chr3.1:36454736-36454755 | MS.gene82624:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 36452427 | 36456186 | 36452427 | ID=MS.gene82624 |
| chr3.1 | mRNA | 36452427 | 36456186 | 36452427 | ID=MS.gene82624.t1;Parent=MS.gene82624 |
| chr3.1 | exon | 36456124 | 36456186 | 36456124 | ID=MS.gene82624.t1.exon1;Parent=MS.gene82624.t1 |
| chr3.1 | CDS | 36456124 | 36456186 | 36456124 | ID=cds.MS.gene82624.t1;Parent=MS.gene82624.t1 |
| chr3.1 | exon | 36454874 | 36455230 | 36454874 | ID=MS.gene82624.t1.exon2;Parent=MS.gene82624.t1 |
| chr3.1 | CDS | 36454874 | 36455230 | 36454874 | ID=cds.MS.gene82624.t1;Parent=MS.gene82624.t1 |
| chr3.1 | exon | 36453729 | 36454171 | 36453729 | ID=MS.gene82624.t1.exon3;Parent=MS.gene82624.t1 |
| chr3.1 | CDS | 36453729 | 36454171 | 36453729 | ID=cds.MS.gene82624.t1;Parent=MS.gene82624.t1 |
| chr3.1 | exon | 36453398 | 36453492 | 36453398 | ID=MS.gene82624.t1.exon4;Parent=MS.gene82624.t1 |
| chr3.1 | CDS | 36453398 | 36453492 | 36453398 | ID=cds.MS.gene82624.t1;Parent=MS.gene82624.t1 |
| chr3.1 | exon | 36452427 | 36452602 | 36452427 | ID=MS.gene82624.t1.exon5;Parent=MS.gene82624.t1 |
| chr3.1 | CDS | 36452427 | 36452602 | 36452427 | ID=cds.MS.gene82624.t1;Parent=MS.gene82624.t1 |
| Gene Sequence |
| Protein sequence |
