Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82805.t1 | XP_013450735.1 | 86.9 | 636 | 75 | 3 | 1 | 633 | 1 | 631 | 2.20E-291 | 1011.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82805.t1 | Q67XL4 | 32.3 | 403 | 220 | 10 | 7 | 394 | 56 | 420 | 2.8e-37 | 158.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82805.t1 | A0A072U6I9 | 86.9 | 636 | 75 | 3 | 1 | 633 | 1 | 631 | 1.6e-291 | 1011.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene82805 | 0.826456 | 2.69E-54 | -1.69E-46 |
| MS.gene049207 | MS.gene82805 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene82805 | 0.803793 | 2.94E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene82805 | 0.8058 | 1.12E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene82805 | 0.824413 | 8.18E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene82805 | 0.812935 | 3.30E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene82805 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene82805 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene051363 | MS.gene82805 | 0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene82805 | 0.819639 | 1.05E-52 | -1.69E-46 |
| MS.gene052286 | MS.gene82805 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene82805 | 0.845251 | 4.56E-59 | -1.69E-46 |
| MS.gene053080 | MS.gene82805 | 0.926087 | 7.59E-91 | -1.69E-46 |
| MS.gene053226 | MS.gene82805 | 0.849976 | 2.29E-60 | -1.69E-46 |
| MS.gene05364 | MS.gene82805 | 0.817042 | 4.05E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene82805 | 0.810515 | 1.11E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene82805 | 0.852981 | 3.23E-61 | -1.69E-46 |
| MS.gene054658 | MS.gene82805 | 0.810033 | 1.41E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene82805 | 0.829877 | 4.02E-55 | -1.69E-46 |
| MS.gene055512 | MS.gene82805 | 0.83827 | 3.18E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene82805 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene82805 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene82805 | 0.813587 | 2.37E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene82805 | 0.820379 | 7.08E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene82805 | 0.836338 | 9.92E-57 | -1.69E-46 |
| MS.gene058548 | MS.gene82805 | 0.831375 | 1.73E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene82805 | 0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene82805 | 0.807882 | 4.07E-50 | -1.69E-46 |
| MS.gene059317 | MS.gene82805 | 0.809119 | 2.21E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene82805 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene82805 | 0.854198 | 1.44E-61 | -1.69E-46 |
| MS.gene05979 | MS.gene82805 | 0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene059830 | MS.gene82805 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene82805 | 0.809898 | 1.51E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene82805 | 0.80467 | 1.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82805.t1 | MTR_6g004480 | 92.925 | 636 | 37 | 3 | 1 | 633 | 1 | 631 | 0.0 | 1118 |
| MS.gene82805.t1 | MTR_1g050760 | 50.000 | 174 | 85 | 1 | 110 | 281 | 1 | 174 | 4.18e-49 | 174 |
| MS.gene82805.t1 | MTR_1g050760 | 50.000 | 174 | 85 | 1 | 110 | 281 | 116 | 289 | 3.49e-47 | 172 |
| MS.gene82805.t1 | MTR_4g120880 | 48.521 | 169 | 87 | 0 | 113 | 281 | 161 | 329 | 2.61e-41 | 153 |
| MS.gene82805.t1 | MTR_4g067300 | 44.970 | 169 | 93 | 0 | 113 | 281 | 134 | 302 | 6.60e-40 | 152 |
| MS.gene82805.t1 | MTR_4g120880 | 48.299 | 147 | 76 | 0 | 113 | 259 | 161 | 307 | 1.19e-34 | 134 |
| MS.gene82805.t1 | MTR_6g084410 | 32.701 | 211 | 128 | 5 | 77 | 284 | 557 | 756 | 5.65e-23 | 104 |
| MS.gene82805.t1 | MTR_1g475240 | 31.925 | 213 | 127 | 6 | 77 | 284 | 566 | 765 | 7.98e-23 | 103 |
| MS.gene82805.t1 | MTR_1g075190 | 31.925 | 213 | 127 | 6 | 77 | 284 | 566 | 765 | 7.98e-23 | 103 |
| MS.gene82805.t1 | MTR_6g008410 | 35.593 | 177 | 106 | 3 | 114 | 284 | 518 | 692 | 1.92e-21 | 100 |
| MS.gene82805.t1 | MTR_2g100660 | 37.500 | 128 | 72 | 2 | 148 | 272 | 593 | 715 | 1.86e-17 | 87.0 |
| MS.gene82805.t1 | MTR_4g126140 | 28.293 | 205 | 140 | 3 | 89 | 290 | 531 | 731 | 4.79e-17 | 85.5 |
| MS.gene82805.t1 | MTR_8g104340 | 30.851 | 188 | 120 | 4 | 74 | 258 | 412 | 592 | 1.72e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82805.t1 | AT3G27550 | 71.756 | 393 | 96 | 6 | 1 | 385 | 1 | 386 | 3.56e-164 | 481 |
| MS.gene82805.t1 | AT3G27550 | 80.303 | 330 | 60 | 2 | 61 | 385 | 1 | 330 | 5.63e-163 | 476 |
| MS.gene82805.t1 | AT3G27550 | 80.303 | 330 | 60 | 2 | 61 | 385 | 1 | 330 | 5.63e-163 | 476 |
| MS.gene82805.t1 | AT3G25440 | 45.918 | 196 | 104 | 1 | 96 | 289 | 57 | 252 | 2.50e-47 | 171 |
| MS.gene82805.t1 | AT3G25440 | 45.918 | 196 | 104 | 1 | 96 | 289 | 121 | 316 | 1.46e-46 | 171 |
| MS.gene82805.t1 | AT2G28480 | 46.857 | 175 | 93 | 0 | 107 | 281 | 119 | 293 | 6.94e-44 | 161 |
| MS.gene82805.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 4.06e-42 | 154 |
| MS.gene82805.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 4.06e-42 | 154 |
| MS.gene82805.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 4.06e-42 | 154 |
| MS.gene82805.t1 | AT4G13070 | 45.128 | 195 | 97 | 3 | 78 | 268 | 111 | 299 | 1.71e-40 | 151 |
| MS.gene82805.t1 | AT3G18390 | 35.106 | 188 | 109 | 4 | 100 | 284 | 611 | 788 | 1.67e-25 | 112 |
| MS.gene82805.t1 | AT3G23070 | 36.000 | 175 | 99 | 3 | 90 | 261 | 586 | 750 | 7.41e-23 | 104 |
| MS.gene82805.t1 | AT4G14510 | 32.812 | 192 | 116 | 3 | 90 | 278 | 613 | 794 | 2.28e-22 | 102 |
| MS.gene82805.t1 | AT3G01370 | 37.143 | 140 | 85 | 1 | 148 | 284 | 575 | 714 | 3.44e-22 | 102 |
| MS.gene82805.t1 | AT4G29750 | 32.609 | 184 | 112 | 3 | 113 | 290 | 611 | 788 | 4.64e-21 | 98.6 |
| MS.gene82805.t1 | AT4G29750 | 32.609 | 184 | 112 | 3 | 113 | 290 | 611 | 788 | 6.47e-21 | 98.2 |
| MS.gene82805.t1 | AT5G16180 | 31.795 | 195 | 118 | 5 | 111 | 290 | 523 | 717 | 1.41e-16 | 84.0 |
Find 159 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGTGATCTCTTCTTA+TGG | 0.210452 | 6.1:-600057 | None:intergenic |
| GTTGGTGTTCGTGGAGTATT+TGG | 0.242614 | 6.1:+598209 | MS.gene82805:CDS |
| AAGAGTCTGGTAAAACATTA+AGG | 0.251609 | 6.1:+595693 | MS.gene82805:CDS |
| TTCAGCTTCATATTCTTTAT+CGG | 0.273368 | 6.1:-599267 | None:intergenic |
| TGCAATGTGGGAGTCGGATT+TGG | 0.290486 | 6.1:+599745 | MS.gene82805:CDS |
| CATTTCTTTAATTCTTTCCT+TGG | 0.291251 | 6.1:-598303 | None:intergenic |
| TCCCTGCCTCTCAAACTCTT+TGG | 0.295275 | 6.1:-599884 | None:intergenic |
| CTCTTTGTAAGGGTATTAAT+AGG | 0.314891 | 6.1:-598434 | None:intergenic |
| CAAGCTTCATCAGCTTCCTT+TGG | 0.315883 | 6.1:-600073 | None:intergenic |
| AGTTTGGAAGACTTAGATAT+TGG | 0.318025 | 6.1:+599309 | MS.gene82805:CDS |
| ATTGGCAATGGTCAAGTTAA+TGG | 0.324195 | 6.1:+599632 | MS.gene82805:CDS |
| AGCTAAATTTAGGACGAATA+TGG | 0.330496 | 6.1:+599676 | MS.gene82805:CDS |
| AGTCCTCCTCACCTTCTGAT+TGG | 0.334499 | 6.1:-599973 | None:intergenic |
| TTCAGAAATGTTGTGCCTTT+AGG | 0.335105 | 6.1:+595503 | MS.gene82805:intron |
| ATTTCTTTAATTCTTTCCTT+GGG | 0.340101 | 6.1:-598302 | None:intergenic |
| TTCAAGAGCTTGCTCAAATC+TGG | 0.345605 | 6.1:-598988 | None:intergenic |
| ATCTTACCTTCCTCTTTGTA+AGG | 0.348042 | 6.1:-598445 | None:intergenic |
| CTTTACACCCGAACAGCTTC+AGG | 0.349585 | 6.1:+598145 | MS.gene82805:CDS |
| CCTTTAGCGGTTTGGAAGAC+TGG | 0.351247 | 6.1:+599945 | MS.gene82805:CDS |
| CTCAAATCTGGCCTTGAATA+GGG | 0.356118 | 6.1:-598976 | None:intergenic |
| TGCTCTATTCCTTGTCCTAA+AGG | 0.362024 | 6.1:-595518 | None:intergenic |
| TTTATACGCCTGAAGCTGTT+CGG | 0.362329 | 6.1:-598153 | None:intergenic |
| GCTCAAATCTGGCCTTGAAT+AGG | 0.363277 | 6.1:-598977 | None:intergenic |
| CATGGATGCCTTTAGCGGTT+TGG | 0.367845 | 6.1:+599937 | MS.gene82805:CDS |
| AAGTTGAAAGAGAGATGAAA+TGG | 0.367950 | 6.1:-595237 | None:intergenic |
| TTATACGCCTGAAGCTGTTC+GGG | 0.370216 | 6.1:-598152 | None:intergenic |
| AACTTCAATCCAATCTCTTC+AGG | 0.372514 | 6.1:+595255 | MS.gene82805:CDS |
| AGAAAGTGGAAGCCACTCTT+TGG | 0.372764 | 6.1:-599097 | None:intergenic |
| GATTCCTCCAAACCATCATT+AGG | 0.373992 | 6.1:-599188 | None:intergenic |
| GTCCTCCTCACCTTCTGATT+GGG | 0.380053 | 6.1:-599972 | None:intergenic |
| GCCATTGCAGTTGGATCCTC+AGG | 0.380404 | 6.1:-599068 | None:intergenic |
| ACTTCCATCTTTCTTGTCAA+TGG | 0.383828 | 6.1:-599126 | None:intergenic |
| GCCAAAGAAAAGGAAGAGTT+TGG | 0.388346 | 6.1:+599293 | MS.gene82805:CDS |
| GGAATCAGATCCTGCTGAAC+AGG | 0.388918 | 6.1:+599205 | MS.gene82805:CDS |
| AAGGGTTTACCTGAAGAGAT+TGG | 0.402994 | 6.1:-595264 | None:intergenic |
| GACACGGTGAAGCTAAATTT+AGG | 0.418116 | 6.1:+599666 | MS.gene82805:CDS |
| AATAGAACCTAATGATGGTT+TGG | 0.420274 | 6.1:+599181 | MS.gene82805:CDS |
| AATACTCCACGAACACCAAC+TGG | 0.421248 | 6.1:-598206 | None:intergenic |
| TATGTTCCAGTTGGTGTTCG+TGG | 0.423683 | 6.1:+598200 | MS.gene82805:CDS |
| GAGAGATGAAATGGGTTTGA+GGG | 0.425769 | 6.1:-595228 | None:intergenic |
| AGAGAGATGAAATGGGTTTG+AGG | 0.426459 | 6.1:-595229 | None:intergenic |
| CACCAAAGAGTTTGAGAGGC+AGG | 0.427775 | 6.1:+599882 | MS.gene82805:CDS |
| AGTTTGAGAGGCAGGGAAGC+AGG | 0.434357 | 6.1:+599890 | MS.gene82805:CDS |
| GCTAAATTTAGGACGAATAT+GGG | 0.439861 | 6.1:+599677 | MS.gene82805:CDS |
| AACAATAAAAGCTATCGTTA+TGG | 0.440253 | 6.1:-595571 | None:intergenic |
| TGCCGTGGTGGAGGCAGCTC+CGG | 0.440666 | 6.1:-598110 | None:intergenic |
| TTTGAATGGATCCTTGTGTC+GGG | 0.442400 | 6.1:+595613 | MS.gene82805:CDS |
| AGAAGAATGCAGAAAGAGTC+TGG | 0.444428 | 6.1:+595680 | MS.gene82805:CDS |
| CAAGGAAAGAATTAAAGAAA+TGG | 0.444685 | 6.1:+598304 | MS.gene82805:CDS |
| AGGATAAATAATACAAGTAT+TGG | 0.447491 | 6.1:+599614 | MS.gene82805:CDS |
| GAGGTAGGTTCAAGGAAAGT+AGG | 0.447947 | 6.1:+599579 | MS.gene82805:CDS |
| CTATCGGCAGTCCGATGCTT+GGG | 0.449257 | 6.1:-599434 | None:intergenic |
| CAAAGGAAGCTGATGAAGCT+TGG | 0.453830 | 6.1:+600074 | MS.gene82805:CDS |
| AGGTTAGAGGCTCAAGAGTT+CGG | 0.454485 | 6.1:+599399 | MS.gene82805:CDS |
| TATTGGAACAGAGAAGAGTA+TGG | 0.456496 | 6.1:+599326 | MS.gene82805:CDS |
| GACTATGATGGTGAGGTTAG+AGG | 0.468968 | 6.1:+599386 | MS.gene82805:CDS |
| AGTTGAAAGAGAGATGAAAT+GGG | 0.472804 | 6.1:-595236 | None:intergenic |
| TCTGGATCATGCCGTGGTGG+AGG | 0.477830 | 6.1:-598119 | None:intergenic |
| AAAGGAAGCTGATGAAGCTT+GGG | 0.481393 | 6.1:+600075 | MS.gene82805:CDS |
| TTATATACAGGCCCTATTCA+AGG | 0.481490 | 6.1:+598965 | MS.gene82805:intron |
| GGTGTTCGTGGAGTATTTGG+AGG | 0.482666 | 6.1:+598212 | MS.gene82805:CDS |
| TGGATGCTGGCCATTGCAGT+TGG | 0.483571 | 6.1:-599077 | None:intergenic |
| CCAGTCTTCCAAACCGCTAA+AGG | 0.489203 | 6.1:-599945 | None:intergenic |
| AAACATAAAGAAAATAGAAC+AGG | 0.489664 | 6.1:+599022 | MS.gene82805:CDS |
| AGAGTCTGGTAAAACATTAA+GGG | 0.491117 | 6.1:+595694 | MS.gene82805:CDS |
| GGAAGCCACTCTTTGGATGC+TGG | 0.495190 | 6.1:-599090 | None:intergenic |
| AGGTAGGTTCAAGGAAAGTA+GGG | 0.497194 | 6.1:+599580 | MS.gene82805:CDS |
| AGCTGAAGAGGCCAAAGAAA+AGG | 0.499259 | 6.1:+599283 | MS.gene82805:CDS |
| ATTCTCTTCATCGTCGCTAT+CGG | 0.500009 | 6.1:-599450 | None:intergenic |
| CCCTACAAGTCAAAATAGTA+AGG | 0.500263 | 6.1:+600018 | MS.gene82805:CDS |
| GGACTCAAGAGGTGGTGATA+AGG | 0.500654 | 6.1:+599991 | MS.gene82805:CDS |
| AATGCCATTGACAAGAAAGA+TGG | 0.502487 | 6.1:+599122 | MS.gene82805:CDS |
| GCTATCGGCAGTCCGATGCT+TGG | 0.508858 | 6.1:-599435 | None:intergenic |
| AGAACAGGACCTGCGGCGGA+TGG | 0.509673 | 6.1:+599037 | MS.gene82805:CDS |
| GATCCATTCAAAAGATTCAA+CGG | 0.510157 | 6.1:-595602 | None:intergenic |
| TGTTCGGGTGTAAAGAGCTC+TGG | 0.511414 | 6.1:-598137 | None:intergenic |
| GAGCAGCAGCAGCGATGATG+AGG | 0.514342 | 6.1:+599817 | MS.gene82805:CDS |
| TCTAGCTCTTCCTGTTCAGC+AGG | 0.518776 | 6.1:-599215 | None:intergenic |
| TTGTCTCCACGGTTAACATA+AGG | 0.519546 | 6.1:-599149 | None:intergenic |
| GTGTCCATGGATGCCTTTAG+CGG | 0.520678 | 6.1:+599932 | MS.gene82805:CDS |
| AATGTGGGAGTCGGATTTGG+AGG | 0.524703 | 6.1:+599748 | MS.gene82805:CDS |
| CTGAACAGGAAGAGCTAGAT+CGG | 0.526672 | 6.1:+599219 | MS.gene82805:CDS |
| TGCAAAATATGCATCTCCAT+TGG | 0.528015 | 6.1:+598240 | MS.gene82805:CDS |
| GCTTAAGAAATATGAGCTAC+CGG | 0.528659 | 6.1:+598091 | MS.gene82805:CDS |
| TGAAGCTAGAGGTAGGTTCA+AGG | 0.529177 | 6.1:+599571 | MS.gene82805:CDS |
| GTCAATGGCATTGAAGAAAG+TGG | 0.531512 | 6.1:-599111 | None:intergenic |
| CCGCACTAAATCCGTGTCCA+TGG | 0.531564 | 6.1:+599919 | MS.gene82805:CDS |
| AACAAGAATTATGTTCCAGT+TGG | 0.532863 | 6.1:+598191 | MS.gene82805:CDS |
| TCTTACCTTCCTCTTTGTAA+GGG | 0.535231 | 6.1:-598444 | None:intergenic |
| GAACAGGACCTGCGGCGGAT+GGG | 0.538425 | 6.1:+599038 | MS.gene82805:CDS |
| GATTTACTCCCATCCGCCGC+AGG | 0.541197 | 6.1:-599046 | None:intergenic |
| TTACTGACGGCTTGTCTCCA+CGG | 0.541347 | 6.1:-599160 | None:intergenic |
| AGAACCTAATGATGGTTTGG+AGG | 0.543260 | 6.1:+599184 | MS.gene82805:CDS |
| CGAAGTTGAAAATGCAATGT+GGG | 0.549326 | 6.1:+599733 | MS.gene82805:CDS |
| CAAACCGCTAAAGGCATCCA+TGG | 0.549768 | 6.1:-599936 | None:intergenic |
| GACGACGATGAGTGGCATCA+TGG | 0.551635 | 6.1:+599500 | MS.gene82805:CDS |
| TGAAGCTTGGGACAGTGACT+AGG | 0.557695 | 6.1:+600087 | MS.gene82805:CDS |
| GCTGTCAACATCACTGTCAT+CGG | 0.559876 | 6.1:-599531 | None:intergenic |
| AATGTTGTGCCTTTAGGACA+AGG | 0.561411 | 6.1:+595509 | MS.gene82805:CDS |
| TAAAGAATATGAAGCTGAAG+AGG | 0.562743 | 6.1:+599271 | MS.gene82805:CDS |
| TGGAACAGAGAAGAGTATGG+TGG | 0.564267 | 6.1:+599329 | MS.gene82805:CDS |
| TTTCTTTAATTCTTTCCTTG+GGG | 0.565613 | 6.1:-598301 | None:intergenic |
| AATGCACCAAAGAGTTTGAG+AGG | 0.565918 | 6.1:+599878 | MS.gene82805:CDS |
| TCATTAGGTTCTATTACTGA+CGG | 0.569181 | 6.1:-599173 | None:intergenic |
| TCGGTTCATCGCTGATATAG+AGG | 0.570941 | 6.1:+599238 | MS.gene82805:CDS |
| TGAAAATGCAATGTGGGAGT+CGG | 0.574987 | 6.1:+599739 | MS.gene82805:CDS |
| CGGGGAATGTCAACGATGAG+AGG | 0.581892 | 6.1:+595632 | MS.gene82805:CDS |
| TCAGTAATAGAACCTAATGA+TGG | 0.582255 | 6.1:+599176 | MS.gene82805:CDS |
| AGCTTCATATTCTTTATCGG+CGG | 0.584618 | 6.1:-599264 | None:intergenic |
| AACTTATGACTGACGAGGAG+CGG | 0.586837 | 6.1:+595747 | MS.gene82805:CDS |
| ACCAAAGAGTTTGAGAGGCA+GGG | 0.588416 | 6.1:+599883 | MS.gene82805:CDS |
| AATAATACAAGTATTGGCAA+TGG | 0.589479 | 6.1:+599620 | MS.gene82805:CDS |
| TCTAGAAATGATGACTATGA+TGG | 0.589821 | 6.1:+599374 | MS.gene82805:CDS |
| TCCTGAGGATCCAACTGCAA+TGG | 0.592648 | 6.1:+599067 | MS.gene82805:CDS |
| AGGAAAGAGTATGCGAAGCA+AGG | 0.594524 | 6.1:+595652 | MS.gene82805:CDS |
| GACTGGATGTCCCAATCAGA+AGG | 0.597113 | 6.1:+599962 | MS.gene82805:CDS |
| CGTTGACATTCCCCGACACA+AGG | 0.600701 | 6.1:-595624 | None:intergenic |
| AGCAGCAGCAGCGATGATGA+GGG | 0.601546 | 6.1:+599818 | MS.gene82805:CDS |
| TGCTTGCAAGACTGAGTGGT+GGG | 0.602807 | 6.1:+598333 | MS.gene82805:CDS |
| TAATACCCTTACAAAGAGGA+AGG | 0.604277 | 6.1:+598439 | MS.gene82805:CDS |
| AGAATATACATCCCAAGCAT+CGG | 0.605468 | 6.1:+599423 | MS.gene82805:CDS |
| AAAACTATTACGATATTGAG+CGG | 0.607700 | 6.1:-599855 | None:intergenic |
| CAGTCTCATGAAACTTCCAA+TGG | 0.613298 | 6.1:-598256 | None:intergenic |
| GTAGGTTCAAGGAAAGTAGG+GGG | 0.613514 | 6.1:+599582 | MS.gene82805:CDS |
| TTGAATGGATCCTTGTGTCG+GGG | 0.613828 | 6.1:+595614 | MS.gene82805:CDS |
| AATGACTCGGTACATTTGAG+AGG | 0.617243 | 6.1:+599773 | MS.gene82805:CDS |
| AGCTCTGGATCATGCCGTGG+TGG | 0.620706 | 6.1:-598122 | None:intergenic |
| ACGACGATGACGACGATGAG+TGG | 0.622982 | 6.1:+599492 | MS.gene82805:CDS |
| GATGGCTCTGATGAAGCTAG+AGG | 0.623735 | 6.1:+599560 | MS.gene82805:CDS |
| GTTGGCGGTAATTTCTACCA+CGG | 0.628009 | 6.1:-598397 | None:intergenic |
| GATGTCCCAATCAGAAGGTG+AGG | 0.630183 | 6.1:+599967 | MS.gene82805:CDS |
| GTCCCAATCAGAAGGTGAGG+AGG | 0.630743 | 6.1:+599970 | MS.gene82805:CDS |
| CCATAAGAAGAGATCACCAA+AGG | 0.633775 | 6.1:+600057 | MS.gene82805:CDS |
| TTGTTGTGACAACTTCCCCA+AGG | 0.637735 | 6.1:+598286 | MS.gene82805:CDS |
| GAAGGTGAGGAGGACTCAAG+AGG | 0.641359 | 6.1:+599980 | MS.gene82805:CDS |
| AATGGCCAGCATCCAAAGAG+TGG | 0.641691 | 6.1:+599085 | MS.gene82805:CDS |
| TCAATGCTTGCAAGACTGAG+TGG | 0.642842 | 6.1:+598329 | MS.gene82805:CDS |
| GGTAGGTTCAAGGAAAGTAG+GGG | 0.644041 | 6.1:+599581 | MS.gene82805:CDS |
| TACAAGTCAAAATAGTAAGG+TGG | 0.645026 | 6.1:+600021 | MS.gene82805:CDS |
| AATGGTGGTCAGAGCAGACA+CGG | 0.648459 | 6.1:+599650 | MS.gene82805:CDS |
| GGTGAGGAGGACTCAAGAGG+TGG | 0.651623 | 6.1:+599983 | MS.gene82805:CDS |
| AAAACAATCATCATGTTCCG+TGG | 0.652160 | 6.1:+598380 | MS.gene82805:CDS |
| GGCAATGGTCAAGTTAATGG+TGG | 0.652521 | 6.1:+599635 | MS.gene82805:CDS |
| CTATTAATACCCTTACAAAG+AGG | 0.653915 | 6.1:+598435 | MS.gene82805:CDS |
| GCTCTGATGAAGCTAGAGGT+AGG | 0.654685 | 6.1:+599564 | MS.gene82805:CDS |
| AAATAGAACAGGACCTGCGG+CGG | 0.657187 | 6.1:+599033 | MS.gene82805:CDS |
| AGAAAATAGAACAGGACCTG+CGG | 0.664826 | 6.1:+599030 | MS.gene82805:CDS |
| TACCGGAGCTGCCTCCACCA+CGG | 0.667902 | 6.1:+598108 | MS.gene82805:CDS |
| GCTAAAGGCATCCATGGACA+CGG | 0.670630 | 6.1:-599930 | None:intergenic |
| GGAAGTCCTTATGTTAACCG+TGG | 0.676008 | 6.1:+599143 | MS.gene82805:CDS |
| GCGAAGTTGAAAATGCAATG+TGG | 0.678148 | 6.1:+599732 | MS.gene82805:CDS |
| CCATGGACACGGATTTAGTG+CGG | 0.681554 | 6.1:-599919 | None:intergenic |
| AAAGAGTATGCGAAGCAAGG+TGG | 0.683453 | 6.1:+595655 | MS.gene82805:CDS |
| AAATGATGACTATGATGGTG+AGG | 0.683700 | 6.1:+599379 | MS.gene82805:CDS |
| GGATTTGGAGGACAATGACT+CGG | 0.695707 | 6.1:+599760 | MS.gene82805:CDS |
| AAGAGCTCTGGATCATGCCG+TGG | 0.696702 | 6.1:-598125 | None:intergenic |
| ATGCTTGCAAGACTGAGTGG+TGG | 0.703573 | 6.1:+598332 | MS.gene82805:CDS |
| GCGGATGGGAGTAAATCCTG+AGG | 0.727364 | 6.1:+599052 | MS.gene82805:CDS |
| GAAGAAACTTATGACTGACG+AGG | 0.727589 | 6.1:+595742 | MS.gene82805:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAAAATATAAACTTTA+AGG | - | chr6.1:595351-595370 | None:intergenic | 10.0% |
| !!! | ATATTTTTGATTTAATTAGT+TGG | - | chr6.1:596775-596794 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACTAAGAT+TGG | + | chr6.1:595404-595423 | MS.gene82805:intron | 10.0% |
| !! | ATAAACAAAAAATCTACAAA+AGG | - | chr6.1:596380-596399 | None:intergenic | 15.0% |
| !! | GTATTATATTAGTAATTTGA+AGG | - | chr6.1:598728-598747 | None:intergenic | 15.0% |
| !!! | AAAATTGTTTTATGGTTTAA+AGG | + | chr6.1:597274-597293 | MS.gene82805:intron | 15.0% |
| !!! | AATTATCATTTTCATTACTT+TGG | - | chr6.1:596138-596157 | None:intergenic | 15.0% |
| !!! | ATTAATAGGTATCAAATTTT+TGG | - | chr6.1:598423-598442 | None:intergenic | 15.0% |
| !!! | TCTACTACAATTTTTATTTT+TGG | - | chr6.1:596833-596852 | None:intergenic | 15.0% |
| !!! | TCTCAATTAAAATTGTTTTA+TGG | + | chr6.1:597266-597285 | MS.gene82805:intron | 15.0% |
| !!! | TTAATAGGTATCAAATTTTT+GGG | - | chr6.1:598422-598441 | None:intergenic | 15.0% |
| !! | AAAAACAGTAGTATTGTTTA+AGG | - | chr6.1:597507-597526 | None:intergenic | 20.0% |
| !! | AAACATAAAGAAAATAGAAC+AGG | + | chr6.1:599022-599041 | MS.gene82805:CDS | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | chr6.1:596579-596598 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | - | chr6.1:596581-596600 | None:intergenic | 20.0% |
| !! | ACAATTACTTAAAACTGATA+AGG | - | chr6.1:597803-597822 | None:intergenic | 20.0% |
| !! | AGGATAAATAATACAAGTAT+TGG | + | chr6.1:599614-599633 | MS.gene82805:CDS | 20.0% |
| !! | ATTGTAAATGTTGTATAGAT+AGG | + | chr6.1:597447-597466 | MS.gene82805:intron | 20.0% |
| !! | ATTTCTTTAATTCTTTCCTT+GGG | - | chr6.1:598305-598324 | None:intergenic | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | - | chr6.1:596580-596599 | None:intergenic | 20.0% |
| !! | GAATACAAAATTGAAGTAAA+CGG | - | chr6.1:595292-595311 | None:intergenic | 20.0% |
| !! | GATTTATGTATTCGAATTTA+TGG | + | chr6.1:595894-595913 | MS.gene82805:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr6.1:596497-596516 | None:intergenic | 20.0% |
| !! | TAGACATTAGAAAGTTTAAT+TGG | + | chr6.1:596072-596091 | MS.gene82805:intron | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | chr6.1:596622-596641 | MS.gene82805:intron | 20.0% |
| !! | TTTGTTAATTGGTATTTCAT+AGG | + | chr6.1:595433-595452 | MS.gene82805:intron | 20.0% |
| !!! | ATTGGTTTACATTTGTTAAT+TGG | + | chr6.1:595422-595441 | MS.gene82805:intron | 20.0% |
| !!! | TAACTGATAATGAACAATAT+TGG | - | chr6.1:598505-598524 | None:intergenic | 20.0% |
| ! | AAAACTATTACGATATTGAG+CGG | - | chr6.1:599858-599877 | None:intergenic | 25.0% |
| ! | AAAATTGAAGTAAACGGAAA+AGG | - | chr6.1:595286-595305 | None:intergenic | 25.0% |
| ! | AAATTGAAGTAAACGGAAAA+GGG | - | chr6.1:595285-595304 | None:intergenic | 25.0% |
| ! | AACAATAAAAGCTATCGTTA+TGG | - | chr6.1:595574-595593 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | + | chr6.1:596704-596723 | MS.gene82805:intron | 25.0% |
| ! | AATCATGAACTGTCATATTT+AGG | + | chr6.1:598477-598496 | MS.gene82805:intron | 25.0% |
| ! | AATTGGTATTTCATAGGAAT+AGG | + | chr6.1:595439-595458 | MS.gene82805:intron | 25.0% |
| ! | AATTGTTAAGATTAGAACAG+GGG | - | chr6.1:595992-596011 | None:intergenic | 25.0% |
| ! | ACATTATGAGTATAGAATCT+GGG | + | chr6.1:596275-596294 | MS.gene82805:intron | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+GGG | + | chr6.1:596705-596724 | MS.gene82805:intron | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr6.1:596533-596552 | None:intergenic | 25.0% |
| ! | ATGTTTCAAGGACAATAATT+TGG | + | chr6.1:598876-598895 | MS.gene82805:intron | 25.0% |
| ! | ATTATACCAAACCTTTATAC+AGG | + | chr6.1:596866-596885 | MS.gene82805:intron | 25.0% |
| ! | CAAAAATAAAATCAAATGGG+TGG | - | chr6.1:596494-596513 | None:intergenic | 25.0% |
| ! | CAACTTATGTTGTAAAGTAT+TGG | + | chr6.1:597351-597370 | MS.gene82805:intron | 25.0% |
| ! | CAAGAATTTAACTACTTCAT+TGG | + | chr6.1:597848-597867 | MS.gene82805:intron | 25.0% |
| ! | CAAGGAAAGAATTAAAGAAA+TGG | + | chr6.1:598304-598323 | MS.gene82805:CDS | 25.0% |
| ! | CAATGAAGTAGTTAAATTCT+TGG | - | chr6.1:597850-597869 | None:intergenic | 25.0% |
| ! | CAATTGTTAAGATTAGAACA+GGG | - | chr6.1:595993-596012 | None:intergenic | 25.0% |
| ! | CATTTCTTTAATTCTTTCCT+TGG | - | chr6.1:598306-598325 | None:intergenic | 25.0% |
| ! | CTGTTCTAATCTTAACAATT+GGG | + | chr6.1:595992-596011 | MS.gene82805:intron | 25.0% |
| ! | GAAAATGATAATTTGATGCA+TGG | + | chr6.1:596145-596164 | MS.gene82805:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr6.1:596498-596517 | None:intergenic | 25.0% |
| ! | GTATTCGAATTTATGGTTTA+AGG | + | chr6.1:595901-595920 | MS.gene82805:intron | 25.0% |
| ! | GTTTAATAGATACCATAACT+AGG | - | chr6.1:598903-598922 | None:intergenic | 25.0% |
| ! | TACATTATGAGTATAGAATC+TGG | + | chr6.1:596274-596293 | MS.gene82805:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr6.1:596532-596551 | None:intergenic | 25.0% |
| ! | TTCAGCTTCATATTCTTTAT+CGG | - | chr6.1:599270-599289 | None:intergenic | 25.0% |
| ! | TTGTTACCGTTATTATATAC+AGG | + | chr6.1:598953-598972 | MS.gene82805:intron | 25.0% |
| ! | TTTAATTAGTTGGAGTTTAG+TGG | - | chr6.1:596765-596784 | None:intergenic | 25.0% |
| ! | TTTCTTTAATTCTTTCCTTG+GGG | - | chr6.1:598304-598323 | None:intergenic | 25.0% |
| !! | GTATCTTTTCTCTCTTTTAT+GGG | - | chr6.1:596805-596824 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr6.1:596569-596588 | None:intergenic | 25.0% |
| !! | TGAAAATGCTTTTGTGATTA+TGG | - | chr6.1:598612-598631 | None:intergenic | 25.0% |
| !! | TGATTGACTTTAATGTTTCA+AGG | + | chr6.1:598864-598883 | MS.gene82805:intron | 25.0% |
| !! | TGTATCTTTTCTCTCTTTTA+TGG | - | chr6.1:596806-596825 | None:intergenic | 25.0% |
| !! | TTGAAAGTAAACAGTAGTTT+TGG | + | chr6.1:598534-598553 | MS.gene82805:intron | 25.0% |
| !! | TTTAAGGAAAAAGCGTAAAA+GGG | - | chr6.1:595335-595354 | None:intergenic | 25.0% |
| !!! | AAGTTTATTCAAGCTGATTT+TGG | + | chr6.1:597424-597443 | MS.gene82805:intron | 25.0% |
| !!! | AATAATACAAGTATTGGCAA+TGG | + | chr6.1:599620-599639 | MS.gene82805:CDS | 25.0% |
| !!! | ACAATTTTAATTGAGAAGCA+CGG | - | chr6.1:597262-597281 | None:intergenic | 25.0% |
| !!! | ATTCGATGTTTTTGTCTTTT+TGG | + | chr6.1:595480-595499 | MS.gene82805:intron | 25.0% |
| !!! | ATTTATTTTGCCGCAATTTT+GGG | - | chr6.1:597008-597027 | None:intergenic | 25.0% |
| !!! | GTCTATGTTTAATTTTGTTG+TGG | + | chr6.1:597978-597997 | MS.gene82805:intron | 25.0% |
| !!! | TACAAGTTTGTTATAAGTTG+TGG | - | chr6.1:597655-597674 | None:intergenic | 25.0% |
| !!! | TGCCATTTTCTTTTTATTAG+CGG | - | chr6.1:596018-596037 | None:intergenic | 25.0% |
| AAAATAGACATGGAACTGTT+AGG | + | chr6.1:596211-596230 | MS.gene82805:intron | 30.0% | |
| AAAGCCTTCTTAAACACTTT+AGG | + | chr6.1:595966-595985 | MS.gene82805:intron | 30.0% | |
| AAATGTGAAAAATGCAAAGG+GGG | + | chr6.1:596707-596726 | MS.gene82805:intron | 30.0% | |
| AACAAGAATTATGTTCCAGT+TGG | + | chr6.1:598191-598210 | MS.gene82805:CDS | 30.0% | |
| AAGAGTCTGGTAAAACATTA+AGG | + | chr6.1:595693-595712 | MS.gene82805:CDS | 30.0% | |
| AAGTTGAAAGAGAGATGAAA+TGG | - | chr6.1:595240-595259 | None:intergenic | 30.0% | |
| ACAAACTTGTATGACAATTC+TGG | + | chr6.1:597664-597683 | MS.gene82805:intron | 30.0% | |
| ACTAACGAAAGAACATTTGA+TGG | - | chr6.1:598662-598681 | None:intergenic | 30.0% | |
| AGAGTCTGGTAAAACATTAA+GGG | + | chr6.1:595694-595713 | MS.gene82805:CDS | 30.0% | |
| AGAGTGATTCAAAATAGACA+TGG | + | chr6.1:596201-596220 | MS.gene82805:intron | 30.0% | |
| AGTTGAAAGAGAGATGAAAT+GGG | - | chr6.1:595239-595258 | None:intergenic | 30.0% | |
| AGTTTGGAAGACTTAGATAT+TGG | + | chr6.1:599309-599328 | MS.gene82805:CDS | 30.0% | |
| ATAGGGCCTGTATATAATAA+CGG | - | chr6.1:598962-598981 | None:intergenic | 30.0% | |
| ATCATAAGGGGATAATTTGA+TGG | + | chr6.1:596171-596190 | MS.gene82805:intron | 30.0% | |
| CAACATCTCAAAGCAATATA+TGG | - | chr6.1:595864-595883 | None:intergenic | 30.0% | |
| CAATAATTTGGTCCTAGTTA+TGG | + | chr6.1:598888-598907 | MS.gene82805:intron | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | + | chr6.1:596631-596650 | MS.gene82805:intron | 30.0% | |
| CATCTAGTAATTTGAAAAGG+GGG | - | chr6.1:596530-596549 | None:intergenic | 30.0% | |
| CCAATTGTTAAGATTAGAAC+AGG | - | chr6.1:595994-596013 | None:intergenic | 30.0% | |
| CCTGTTCTAATCTTAACAAT+TGG | + | chr6.1:595991-596010 | MS.gene82805:intron | 30.0% | |
| CTAAAATTACTGTTTGCTCT+TGG | + | chr6.1:598821-598840 | MS.gene82805:intron | 30.0% | |
| CTAATATAATACACACTCAG+TGG | + | chr6.1:598736-598755 | MS.gene82805:intron | 30.0% | |
| CTATTAATACCCTTACAAAG+AGG | + | chr6.1:598435-598454 | MS.gene82805:CDS | 30.0% | |
| CTTCAGGCGTATAAAAAAAT+TGG | + | chr6.1:598161-598180 | MS.gene82805:CDS | 30.0% | |
| GAAATGTGAAAAATGCAAAG+GGG | + | chr6.1:596706-596725 | MS.gene82805:intron | 30.0% | |
| GATCCATTCAAAAGATTCAA+CGG | - | chr6.1:595605-595624 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr6.1:596531-596550 | None:intergenic | 30.0% | |
| TAAAGAATATGAAGCTGAAG+AGG | + | chr6.1:599271-599290 | MS.gene82805:CDS | 30.0% | |
| TAATGTAAGACACACATTCA+AGG | - | chr6.1:598694-598713 | None:intergenic | 30.0% | |
| TACAAGTCAAAATAGTAAGG+TGG | + | chr6.1:600021-600040 | MS.gene82805:CDS | 30.0% | |
| TCAGACAAAATTAAATGCTG+TGG | + | chr6.1:597047-597066 | MS.gene82805:intron | 30.0% | |
| TCTAGAAATGATGACTATGA+TGG | + | chr6.1:599374-599393 | MS.gene82805:CDS | 30.0% | |
| TGTTCTTTCGTTAGTTAGTT+TGG | + | chr6.1:598667-598686 | MS.gene82805:intron | 30.0% | |
| TTGTGAACATTCAGAAGTTT+CGG | + | chr6.1:598773-598792 | MS.gene82805:intron | 30.0% | |
| TTGTGATTATGGTCAATTCA+AGG | - | chr6.1:598601-598620 | None:intergenic | 30.0% | |
| TTTCTTCTGAATTCTGATCT+GGG | + | chr6.1:597155-597174 | MS.gene82805:intron | 30.0% | |
| ! | AAACCGTTGAATCTTTTGAA+TGG | + | chr6.1:595599-595618 | MS.gene82805:CDS | 30.0% |
| ! | AGCTAAATTTAGGACGAATA+TGG | + | chr6.1:599676-599695 | MS.gene82805:CDS | 30.0% |
| ! | AGTTCTCTTTGTTCTAAATG+TGG | - | chr6.1:596985-597004 | None:intergenic | 30.0% |
| ! | ATCCTTTATTTGTGTGTAGT+CGG | + | chr6.1:597098-597117 | MS.gene82805:intron | 30.0% |
| ! | CTTTAAGGAAAAAGCGTAAA+AGG | - | chr6.1:595336-595355 | None:intergenic | 30.0% |
| ! | GCTAAATTTAGGACGAATAT+GGG | + | chr6.1:599677-599696 | MS.gene82805:CDS | 30.0% |
| ! | TTAAGGAAAAAGCGTAAAAG+GGG | - | chr6.1:595334-595353 | None:intergenic | 30.0% |
| ! | TTTTATGGTTTAAAGGCTCA+TGG | + | chr6.1:597281-597300 | MS.gene82805:intron | 30.0% |
| !! | CTCTTTGTAAGGGTATTAAT+AGG | - | chr6.1:598437-598456 | None:intergenic | 30.0% |
| !! | TGGCGATTTTAACAAAATTG+AGG | + | chr6.1:597684-597703 | MS.gene82805:intron | 30.0% |
| !! | TTTTGTTTATCTTGCCATCA+CGG | + | chr6.1:596390-596409 | MS.gene82805:intron | 30.0% |
| !!! | ACCTTACTATTTTGACTTGT+AGG | - | chr6.1:600022-600041 | None:intergenic | 30.0% |
| !!! | CACAAAAGCATTTTCAAATG+TGG | + | chr6.1:598616-598635 | MS.gene82805:intron | 30.0% |
| !!! | CCTTACTATTTTGACTTGTA+GGG | - | chr6.1:600021-600040 | None:intergenic | 30.0% |
| !!! | GATTTATTTTGCCGCAATTT+TGG | - | chr6.1:597009-597028 | None:intergenic | 30.0% |
| !!! | GCTTGAAAATTTTCAAGTCA+CGG | - | chr6.1:597909-597928 | None:intergenic | 30.0% |
| !!! | TAGGTATCAAATTTTTGGGT+TGG | - | chr6.1:598418-598437 | None:intergenic | 30.0% |
| AAAACAATCATCATGTTCCG+TGG | + | chr6.1:598380-598399 | MS.gene82805:CDS | 35.0% | |
| AAAGAGAACTCCCAAAATTG+CGG | + | chr6.1:596995-597014 | MS.gene82805:intron | 35.0% | |
| AAAGCGTAAAAGGGGTTTAA+GGG | - | chr6.1:595326-595345 | None:intergenic | 35.0% | |
| AACTTCAATCCAATCTCTTC+AGG | + | chr6.1:595255-595274 | MS.gene82805:CDS | 35.0% | |
| AAGCTTCCTGTATAAAGGTT+TGG | - | chr6.1:596875-596894 | None:intergenic | 35.0% | |
| AATGCCATTGACAAGAAAGA+TGG | + | chr6.1:599122-599141 | MS.gene82805:CDS | 35.0% | |
| AATGTGAAAAATGCAAAGGG+GGG | + | chr6.1:596708-596727 | MS.gene82805:intron | 35.0% | |
| AATTGCGGCAAAATAAATCC+AGG | + | chr6.1:597010-597029 | MS.gene82805:intron | 35.0% | |
| ACAACCTTAGACTAGAATCT+TGG | - | chr6.1:595380-595399 | None:intergenic | 35.0% | |
| ACTTCCATCTTTCTTGTCAA+TGG | - | chr6.1:599129-599148 | None:intergenic | 35.0% | |
| AGAATATACATCCCAAGCAT+CGG | + | chr6.1:599423-599442 | MS.gene82805:CDS | 35.0% | |
| AGCTTCATATTCTTTATCGG+CGG | - | chr6.1:599267-599286 | None:intergenic | 35.0% | |
| ATCTTACCTTCCTCTTTGTA+AGG | - | chr6.1:598448-598467 | None:intergenic | 35.0% | |
| ATTGAGATTCTGTCAAGAAG+GGG | + | chr6.1:596234-596253 | MS.gene82805:intron | 35.0% | |
| ATTGGCAATGGTCAAGTTAA+TGG | + | chr6.1:599632-599651 | MS.gene82805:CDS | 35.0% | |
| CAAATGGGTGGTTACATTAA+GGG | - | chr6.1:596482-596501 | None:intergenic | 35.0% | |
| CCCTACAAGTCAAAATAGTA+AGG | + | chr6.1:600018-600037 | MS.gene82805:CDS | 35.0% | |
| CGAAGTTGAAAATGCAATGT+GGG | + | chr6.1:599733-599752 | MS.gene82805:CDS | 35.0% | |
| GATTGAGATTCTGTCAAGAA+GGG | + | chr6.1:596233-596252 | MS.gene82805:intron | 35.0% | |
| GCTTAAGAAATATGAGCTAC+CGG | + | chr6.1:598091-598110 | MS.gene82805:CDS | 35.0% | |
| GGCCGCTAATAAAAAGAAAA+TGG | + | chr6.1:596013-596032 | MS.gene82805:intron | 35.0% | |
| GTATAGAATCTGGGTTTAAC+AGG | + | chr6.1:596284-596303 | MS.gene82805:intron | 35.0% | |
| GTCGACAAACAGTTATTAGA+CGG | - | chr6.1:595811-595830 | None:intergenic | 35.0% | |
| GTGAAAGTAGTAAGCAGAAT+TGG | + | chr6.1:597572-597591 | MS.gene82805:intron | 35.0% | |
| GTGTCTTACATTAGTCAGTT+TGG | + | chr6.1:598701-598720 | MS.gene82805:intron | 35.0% | |
| GTTTCTTCTGAATTCTGATC+TGG | + | chr6.1:597154-597173 | MS.gene82805:intron | 35.0% | |
| TAATACCCTTACAAAGAGGA+AGG | + | chr6.1:598439-598458 | MS.gene82805:CDS | 35.0% | |
| TATTGGAACAGAGAAGAGTA+TGG | + | chr6.1:599326-599345 | MS.gene82805:CDS | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | - | chr6.1:596483-596502 | None:intergenic | 35.0% | |
| TCGACAAACAGTTATTAGAC+GGG | - | chr6.1:595810-595829 | None:intergenic | 35.0% | |
| TCTTACCTTCCTCTTTGTAA+GGG | - | chr6.1:598447-598466 | None:intergenic | 35.0% | |
| TGAAAAGGGGGTTACATTTA+GGG | - | chr6.1:596518-596537 | None:intergenic | 35.0% | |
| TGATGCATGGTTGATCATAA+GGG | + | chr6.1:596158-596177 | MS.gene82805:intron | 35.0% | |
| TGCAAAATATGCATCTCCAT+TGG | + | chr6.1:598240-598259 | MS.gene82805:CDS | 35.0% | |
| TTATATACAGGCCCTATTCA+AGG | + | chr6.1:598965-598984 | MS.gene82805:intron | 35.0% | |
| TTCACCAAGATTCTAGTCTA+AGG | + | chr6.1:595373-595392 | MS.gene82805:intron | 35.0% | |
| TTCAGAAATGTTGTGCCTTT+AGG | + | chr6.1:595503-595522 | MS.gene82805:intron | 35.0% | |
| TTGAAAAGGGGGTTACATTT+AGG | - | chr6.1:596519-596538 | None:intergenic | 35.0% | |
| TTGATGCATGGTTGATCATA+AGG | + | chr6.1:596157-596176 | MS.gene82805:intron | 35.0% | |
| TTTATTTGTGTGTAGTCGGT+GGG | + | chr6.1:597102-597121 | MS.gene82805:intron | 35.0% | |
| TTTGTTTATCTTGCCATCAC+GGG | + | chr6.1:596391-596410 | MS.gene82805:intron | 35.0% | |
| ! | AAAAGCGTAAAAGGGGTTTA+AGG | - | chr6.1:595327-595346 | None:intergenic | 35.0% |
| ! | AAATGATGACTATGATGGTG+AGG | + | chr6.1:599379-599398 | MS.gene82805:CDS | 35.0% |
| ! | CTTTGTTCTAAATGTGGCAT+GGG | - | chr6.1:596979-596998 | None:intergenic | 35.0% |
| ! | GATGTTGACAGCAATTTTGA+TGG | + | chr6.1:599542-599561 | MS.gene82805:CDS | 35.0% |
| ! | TCCAAACTCTTCCTTTTCTT+TGG | - | chr6.1:599297-599316 | None:intergenic | 35.0% |
| ! | TCTTTGTTCTAAATGTGGCA+TGG | - | chr6.1:596980-596999 | None:intergenic | 35.0% |
| ! | TGATGGACAAAACTGACTAA+CGG | - | chr6.1:598645-598664 | None:intergenic | 35.0% |
| ! | TTTGTTATAAGTTGTGGCCA+TGG | - | chr6.1:597649-597668 | None:intergenic | 35.0% |
| ! | TTTTAGTCCCTAAATGTGTG+AGG | - | chr6.1:598807-598826 | None:intergenic | 35.0% |
| ! | TTTTGAATGGATCCTTGTGT+CGG | + | chr6.1:595612-595631 | MS.gene82805:CDS | 35.0% |
| !! | TTTTAATTGAGAAGCACGGT+GGG | - | chr6.1:597258-597277 | None:intergenic | 35.0% |
| !!! | ATTTTAATTGAGAAGCACGG+TGG | - | chr6.1:597259-597278 | None:intergenic | 35.0% |
| !!! | GTATCAAATTTTTGGGTTGG+CGG | - | chr6.1:598415-598434 | None:intergenic | 35.0% |
| AAAGGAAGCTGATGAAGCTT+GGG | + | chr6.1:600075-600094 | MS.gene82805:CDS | 40.0% | |
| AAGGGTTTACCTGAAGAGAT+TGG | - | chr6.1:595267-595286 | None:intergenic | 40.0% | |
| AATGCACCAAAGAGTTTGAG+AGG | + | chr6.1:599878-599897 | MS.gene82805:CDS | 40.0% | |
| ACAAAAGGCTAGCGAAAACA+TGG | - | chr6.1:596365-596384 | None:intergenic | 40.0% | |
| AGAAAATAGAACAGGACCTG+CGG | + | chr6.1:599030-599049 | MS.gene82805:CDS | 40.0% | |
| AGAAGAATGCAGAAAGAGTC+TGG | + | chr6.1:595680-595699 | MS.gene82805:CDS | 40.0% | |
| AGCTCAAGCTTCCTGTATAA+AGG | - | chr6.1:596880-596899 | None:intergenic | 40.0% | |
| AGGTAGGTTCAAGGAAAGTA+GGG | + | chr6.1:599580-599599 | MS.gene82805:CDS | 40.0% | |
| ATGGTCAATTCAAGGACTAC+AGG | - | chr6.1:598593-598612 | None:intergenic | 40.0% | |
| ATTCTCTTCATCGTCGCTAT+CGG | - | chr6.1:599453-599472 | None:intergenic | 40.0% | |
| CAGTCTCATGAAACTTCCAA+TGG | - | chr6.1:598259-598278 | None:intergenic | 40.0% | |
| CCATAAGAAGAGATCACCAA+AGG | + | chr6.1:600057-600076 | MS.gene82805:CDS | 40.0% | |
| CTGAACAGAAATTACCTTCC+TGG | - | chr6.1:597031-597050 | None:intergenic | 40.0% | |
| GAAGAAACTTATGACTGACG+AGG | + | chr6.1:595742-595761 | MS.gene82805:CDS | 40.0% | |
| GACACGGTGAAGCTAAATTT+AGG | + | chr6.1:599666-599685 | MS.gene82805:CDS | 40.0% | |
| GACACTACCTCACACATTTA+GGG | + | chr6.1:598797-598816 | MS.gene82805:intron | 40.0% | |
| GATGCATGGTTGATCATAAG+GGG | + | chr6.1:596159-596178 | MS.gene82805:intron | 40.0% | |
| GCCAAAGAAAAGGAAGAGTT+TGG | + | chr6.1:599293-599312 | MS.gene82805:CDS | 40.0% | |
| GCGAAGTTGAAAATGCAATG+TGG | + | chr6.1:599732-599751 | MS.gene82805:CDS | 40.0% | |
| GGATTGAGATTCTGTCAAGA+AGG | + | chr6.1:596232-596251 | MS.gene82805:intron | 40.0% | |
| GGCCAAAGTCATGAAAGTTT+GGG | + | chr6.1:597176-597195 | MS.gene82805:intron | 40.0% | |
| GTGCTCGTTATATGATCTCT+TGG | + | chr6.1:598000-598019 | MS.gene82805:intron | 40.0% | |
| TGAAAATGCAATGTGGGAGT+CGG | + | chr6.1:599739-599758 | MS.gene82805:CDS | 40.0% | |
| TGACACTACCTCACACATTT+AGG | + | chr6.1:598796-598815 | MS.gene82805:intron | 40.0% | |
| TGCTCTATTCCTTGTCCTAA+AGG | - | chr6.1:595521-595540 | None:intergenic | 40.0% | |
| TGGTAAAGCTTTCGTCAATG+CGG | - | chr6.1:596937-596956 | None:intergenic | 40.0% | |
| TTGTCTCCACGGTTAACATA+AGG | - | chr6.1:599152-599171 | None:intergenic | 40.0% | |
| TTGTTTATCTTGCCATCACG+GGG | + | chr6.1:596392-596411 | MS.gene82805:intron | 40.0% | |
| TTTATACGCCTGAAGCTGTT+CGG | - | chr6.1:598156-598175 | None:intergenic | 40.0% | |
| TTTGAATGGATCCTTGTGTC+GGG | + | chr6.1:595613-595632 | MS.gene82805:CDS | 40.0% | |
| TTTGCCTGCAAACAGTTGAA+GGG | - | chr6.1:598044-598063 | None:intergenic | 40.0% | |
| ! | AGAGAGATGAAATGGGTTTG+AGG | - | chr6.1:595232-595251 | None:intergenic | 40.0% |
| ! | CACCGACTACACACAAATAA+AGG | - | chr6.1:597103-597122 | None:intergenic | 40.0% |
| ! | CCTTTGGTGATCTCTTCTTA+TGG | - | chr6.1:600060-600079 | None:intergenic | 40.0% |
| ! | CTTTATTTGTGTGTAGTCGG+TGG | + | chr6.1:597101-597120 | MS.gene82805:intron | 40.0% |
| ! | GAGAGATGAAATGGGTTTGA+GGG | - | chr6.1:595231-595250 | None:intergenic | 40.0% |
| ! | GTCAATGGCATTGAAGAAAG+TGG | - | chr6.1:599114-599133 | None:intergenic | 40.0% |
| ! | TTCAAGAGCTTGCTCAAATC+TGG | - | chr6.1:598991-599010 | None:intergenic | 40.0% |
| ! | TTTAATTGAGAAGCACGGTG+GGG | - | chr6.1:597257-597276 | None:intergenic | 40.0% |
| !! | AATGACTCGGTACATTTGAG+AGG | + | chr6.1:599773-599792 | MS.gene82805:CDS | 40.0% |
| !! | AATGTTGTGCCTTTAGGACA+AGG | + | chr6.1:595509-595528 | MS.gene82805:CDS | 40.0% |
| !! | CTCAAATCTGGCCTTGAATA+GGG | - | chr6.1:598979-598998 | None:intergenic | 40.0% |
| !! | TGGGTTTAACAGGTGTTGAA+TGG | + | chr6.1:596294-596313 | MS.gene82805:intron | 40.0% |
| AAATGGGGCAAGTGTTTCCA+TGG | + | chr6.1:597629-597648 | MS.gene82805:intron | 45.0% | |
| AACTTATGACTGACGAGGAG+CGG | + | chr6.1:595747-595766 | MS.gene82805:CDS | 45.0% | |
| AAGAATGCGTGCATGTGTAC+TGG | + | chr6.1:597736-597755 | MS.gene82805:intron | 45.0% | |
| AATACTCCACGAACACCAAC+TGG | - | chr6.1:598209-598228 | None:intergenic | 45.0% | |
| ACCAAAGAGTTTGAGAGGCA+GGG | + | chr6.1:599883-599902 | MS.gene82805:CDS | 45.0% | |
| ACTTTGATGCCTGTGCGAAA+TGG | + | chr6.1:597612-597631 | MS.gene82805:intron | 45.0% | |
| AGAAAGTGGAAGCCACTCTT+TGG | - | chr6.1:599100-599119 | None:intergenic | 45.0% | |
| AGAATCGAACTTCGTGATCG+AGG | - | chr6.1:597076-597095 | None:intergenic | 45.0% | |
| AGCTGAAGAGGCCAAAGAAA+AGG | + | chr6.1:599283-599302 | MS.gene82805:CDS | 45.0% | |
| AGGTTAGAGGCTCAAGAGTT+CGG | + | chr6.1:599399-599418 | MS.gene82805:CDS | 45.0% | |
| CAAAGGAAGCTGATGAAGCT+TGG | + | chr6.1:600074-600093 | MS.gene82805:CDS | 45.0% | |
| CAAGCTTCATCAGCTTCCTT+TGG | - | chr6.1:600076-600095 | None:intergenic | 45.0% | |
| CTGAACAGGAAGAGCTAGAT+CGG | + | chr6.1:599219-599238 | MS.gene82805:CDS | 45.0% | |
| CTTTCGTCAATGCGGTTTCA+GGG | - | chr6.1:596929-596948 | None:intergenic | 45.0% | |
| CTTTGATGCCTGTGCGAAAT+GGG | + | chr6.1:597613-597632 | MS.gene82805:intron | 45.0% | |
| CTTTGCCTGCAAACAGTTGA+AGG | - | chr6.1:598045-598064 | None:intergenic | 45.0% | |
| GAGGTAGGTTCAAGGAAAGT+AGG | + | chr6.1:599579-599598 | MS.gene82805:CDS | 45.0% | |
| GCAAAGGGGGGTTACATTAA+GGG | + | chr6.1:596720-596739 | MS.gene82805:intron | 45.0% | |
| GCGGCAAAATAAATCCAGGA+AGG | + | chr6.1:597014-597033 | MS.gene82805:intron | 45.0% | |
| GCTGTCAACATCACTGTCAT+CGG | - | chr6.1:599534-599553 | None:intergenic | 45.0% | |
| GGAAGTCCTTATGTTAACCG+TGG | + | chr6.1:599143-599162 | MS.gene82805:CDS | 45.0% | |
| GGATTTGGAGGACAATGACT+CGG | + | chr6.1:599760-599779 | MS.gene82805:CDS | 45.0% | |
| GGCAATGGTCAAGTTAATGG+TGG | + | chr6.1:599635-599654 | MS.gene82805:CDS | 45.0% | |
| GGCCCAAACTTTCATGACTT+TGG | - | chr6.1:597181-597200 | None:intergenic | 45.0% | |
| GGGCCAAAGTCATGAAAGTT+TGG | + | chr6.1:597175-597194 | MS.gene82805:intron | 45.0% | |
| GGTAGGTTCAAGGAAAGTAG+GGG | + | chr6.1:599581-599600 | MS.gene82805:CDS | 45.0% | |
| GTAGGTTCAAGGAAAGTAGG+GGG | + | chr6.1:599582-599601 | MS.gene82805:CDS | 45.0% | |
| GTTGGCGGTAATTTCTACCA+CGG | - | chr6.1:598400-598419 | None:intergenic | 45.0% | |
| TCAATGCTTGCAAGACTGAG+TGG | + | chr6.1:598329-598348 | MS.gene82805:CDS | 45.0% | |
| TCGGTTCATCGCTGATATAG+AGG | + | chr6.1:599238-599257 | MS.gene82805:CDS | 45.0% | |
| TGAAGCTAGAGGTAGGTTCA+AGG | + | chr6.1:599571-599590 | MS.gene82805:CDS | 45.0% | |
| TGCAAAGGGGGGTTACATTA+AGG | + | chr6.1:596719-596738 | MS.gene82805:intron | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | - | chr6.1:596478-596497 | None:intergenic | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | - | chr6.1:596474-596493 | None:intergenic | 45.0% | |
| TGTTTATCTTGCCATCACGG+GGG | + | chr6.1:596393-596412 | MS.gene82805:intron | 45.0% | |
| TTATACGCCTGAAGCTGTTC+GGG | - | chr6.1:598155-598174 | None:intergenic | 45.0% | |
| TTGAATGGATCCTTGTGTCG+GGG | + | chr6.1:595614-595633 | MS.gene82805:CDS | 45.0% | |
| TTGTTGTGACAACTTCCCCA+AGG | + | chr6.1:598286-598305 | MS.gene82805:CDS | 45.0% | |
| TTTGATGCCTGTGCGAAATG+GGG | + | chr6.1:597614-597633 | MS.gene82805:intron | 45.0% | |
| ! | AAAGAGTATGCGAAGCAAGG+TGG | + | chr6.1:595655-595674 | MS.gene82805:CDS | 45.0% |
| ! | AGGAAAGAGTATGCGAAGCA+AGG | + | chr6.1:595652-595671 | MS.gene82805:CDS | 45.0% |
| ! | GACTATGATGGTGAGGTTAG+AGG | + | chr6.1:599386-599405 | MS.gene82805:CDS | 45.0% |
| ! | GGGGCCTAAAGTGTTTAAGA+AGG | - | chr6.1:595973-595992 | None:intergenic | 45.0% |
| ! | GTTGGTGTTCGTGGAGTATT+TGG | + | chr6.1:598209-598228 | MS.gene82805:CDS | 45.0% |
| ! | TATGTTCCAGTTGGTGTTCG+TGG | + | chr6.1:598200-598219 | MS.gene82805:CDS | 45.0% |
| ! | TGGAACAGAGAAGAGTATGG+TGG | + | chr6.1:599329-599348 | MS.gene82805:CDS | 45.0% |
| !! | GCTCAAATCTGGCCTTGAAT+AGG | - | chr6.1:598980-598999 | None:intergenic | 45.0% |
| AAAGTAGGGGGAGAAGAGAG+AGG | + | chr6.1:599594-599613 | MS.gene82805:CDS | 50.0% | |
| AAATAGAACAGGACCTGCGG+CGG | + | chr6.1:599033-599052 | MS.gene82805:CDS | 50.0% | |
| AATGGCCAGCATCCAAAGAG+TGG | + | chr6.1:599085-599104 | MS.gene82805:CDS | 50.0% | |
| AATGGTGGTCAGAGCAGACA+CGG | + | chr6.1:599650-599669 | MS.gene82805:CDS | 50.0% | |
| AATGTGGGAGTCGGATTTGG+AGG | + | chr6.1:599748-599767 | MS.gene82805:CDS | 50.0% | |
| AGGGGGGTTACATTAAGGGA+CGG | + | chr6.1:596724-596743 | MS.gene82805:intron | 50.0% | |
| AGTCCTCCTCACCTTCTGAT+TGG | - | chr6.1:599976-599995 | None:intergenic | 50.0% | |
| ATGCTTGCAAGACTGAGTGG+TGG | + | chr6.1:598332-598351 | MS.gene82805:CDS | 50.0% | |
| CACCAAAGAGTTTGAGAGGC+AGG | + | chr6.1:599882-599901 | MS.gene82805:CDS | 50.0% | |
| CATGGATGCCTTTAGCGGTT+TGG | + | chr6.1:599937-599956 | MS.gene82805:CDS | 50.0% | |
| CCAGTCTTCCAAACCGCTAA+AGG | - | chr6.1:599948-599967 | None:intergenic | 50.0% | |
| CCATGGACACGGATTTAGTG+CGG | - | chr6.1:599922-599941 | None:intergenic | 50.0% | |
| CCTACCCTTCAACTGTTTGC+AGG | + | chr6.1:598037-598056 | MS.gene82805:intron | 50.0% | |
| CCTGCAAACAGTTGAAGGGT+AGG | - | chr6.1:598040-598059 | None:intergenic | 50.0% | |
| CTTAGAGTGACTGATCGACG+AGG | - | chr6.1:597476-597495 | None:intergenic | 50.0% | |
| CTTTACACCCGAACAGCTTC+AGG | + | chr6.1:598145-598164 | MS.gene82805:CDS | 50.0% | |
| GACTGGATGTCCCAATCAGA+AGG | + | chr6.1:599962-599981 | MS.gene82805:CDS | 50.0% | |
| GATGTCCCAATCAGAAGGTG+AGG | + | chr6.1:599967-599986 | MS.gene82805:CDS | 50.0% | |
| GCTCTGATGAAGCTAGAGGT+AGG | + | chr6.1:599564-599583 | MS.gene82805:CDS | 50.0% | |
| GCTTTCGTCAATGCGGTTTC+AGG | - | chr6.1:596930-596949 | None:intergenic | 50.0% | |
| GGAATCAGATCCTGCTGAAC+AGG | + | chr6.1:599205-599224 | MS.gene82805:CDS | 50.0% | |
| GGACTCAAGAGGTGGTGATA+AGG | + | chr6.1:599991-600010 | MS.gene82805:CDS | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | + | chr6.1:596728-596747 | MS.gene82805:intron | 50.0% | |
| GTCCTCCTCACCTTCTGATT+GGG | - | chr6.1:599975-599994 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | - | chr6.1:596475-596494 | None:intergenic | 50.0% | |
| GTGTCCATGGATGCCTTTAG+CGG | + | chr6.1:599932-599951 | MS.gene82805:CDS | 50.0% | |
| GTTCTTACAAACCCCCGTGA+TGG | - | chr6.1:596407-596426 | None:intergenic | 50.0% | |
| GTTTGGGCCCCAAATATCTG+AGG | + | chr6.1:597192-597211 | MS.gene82805:intron | 50.0% | |
| TCCCTGCCTCTCAAACTCTT+TGG | - | chr6.1:599887-599906 | None:intergenic | 50.0% | |
| TCCTGAGGATCCAACTGCAA+TGG | + | chr6.1:599067-599086 | MS.gene82805:CDS | 50.0% | |
| TGAAGCTTGGGACAGTGACT+AGG | + | chr6.1:600087-600106 | MS.gene82805:CDS | 50.0% | |
| TGCAATGTGGGAGTCGGATT+TGG | + | chr6.1:599745-599764 | MS.gene82805:CDS | 50.0% | |
| TGCTTGCAAGACTGAGTGGT+GGG | + | chr6.1:598333-598352 | MS.gene82805:CDS | 50.0% | |
| TGGGATGAGATGTGTGTGGT+GGG | + | chr6.1:597121-597140 | MS.gene82805:intron | 50.0% | |
| TGTTCGGGTGTAAAGAGCTC+TGG | - | chr6.1:598140-598159 | None:intergenic | 50.0% | |
| TTACTGACGGCTTGTCTCCA+CGG | - | chr6.1:599163-599182 | None:intergenic | 50.0% | |
| ! | CCTTTAGCGGTTTGGAAGAC+TGG | + | chr6.1:599945-599964 | MS.gene82805:CDS | 50.0% |
| ! | GGTGTTCGTGGAGTATTTGG+AGG | + | chr6.1:598212-598231 | MS.gene82805:CDS | 50.0% |
| !! | CAAACCGCTAAAGGCATCCA+TGG | - | chr6.1:599939-599958 | None:intergenic | 50.0% |
| !! | GATGGCTCTGATGAAGCTAG+AGG | + | chr6.1:599560-599579 | MS.gene82805:CDS | 50.0% |
| !! | GCTAAAGGCATCCATGGACA+CGG | - | chr6.1:599933-599952 | None:intergenic | 50.0% |
| !! | GTTACTGACTCGACTGGCTT+TGG | - | chr6.1:596957-596976 | None:intergenic | 50.0% |
| !! | TCTAGCTCTTCCTGTTCAGC+AGG | - | chr6.1:599218-599237 | None:intergenic | 50.0% |
| ACACTTGCCCCATTTCGCAC+AGG | - | chr6.1:597624-597643 | None:intergenic | 55.0% | |
| ACGACGATGACGACGATGAG+TGG | + | chr6.1:599492-599511 | MS.gene82805:CDS | 55.0% | |
| AGCAGCAGCAGCGATGATGA+GGG | + | chr6.1:599818-599837 | MS.gene82805:CDS | 55.0% | |
| AGCGCAGGGCCTCAGATATT+TGG | - | chr6.1:597204-597223 | None:intergenic | 55.0% | |
| AGTTTGAGAGGCAGGGAAGC+AGG | + | chr6.1:599890-599909 | MS.gene82805:CDS | 55.0% | |
| CCGCACTAAATCCGTGTCCA+TGG | + | chr6.1:599919-599938 | MS.gene82805:CDS | 55.0% | |
| CGCAGGGCCTCAGATATTTG+GGG | - | chr6.1:597202-597221 | None:intergenic | 55.0% | |
| CGGGGAATGTCAACGATGAG+AGG | + | chr6.1:595632-595651 | MS.gene82805:CDS | 55.0% | |
| CGTTGACATTCCCCGACACA+AGG | - | chr6.1:595627-595646 | None:intergenic | 55.0% | |
| CTATCGGCAGTCCGATGCTT+GGG | - | chr6.1:599437-599456 | None:intergenic | 55.0% | |
| GAAGGTGAGGAGGACTCAAG+AGG | + | chr6.1:599980-599999 | MS.gene82805:CDS | 55.0% | |
| GACGACGATGAGTGGCATCA+TGG | + | chr6.1:599500-599519 | MS.gene82805:CDS | 55.0% | |
| GCCATTGCAGTTGGATCCTC+AGG | - | chr6.1:599071-599090 | None:intergenic | 55.0% | |
| GCGCAGGGCCTCAGATATTT+GGG | - | chr6.1:597203-597222 | None:intergenic | 55.0% | |
| GCGGATGGGAGTAAATCCTG+AGG | + | chr6.1:599052-599071 | MS.gene82805:CDS | 55.0% | |
| GGAAGCCACTCTTTGGATGC+TGG | - | chr6.1:599093-599112 | None:intergenic | 55.0% | |
| GGATGAGATGTGTGTGGTGG+GGG | + | chr6.1:597123-597142 | MS.gene82805:intron | 55.0% | |
| GGGATGAGATGTGTGTGGTG+GGG | + | chr6.1:597122-597141 | MS.gene82805:intron | 55.0% | |
| GGGGTTACATTAAGGGACGG+AGG | + | chr6.1:596727-596746 | MS.gene82805:intron | 55.0% | |
| GTCCCAATCAGAAGGTGAGG+AGG | + | chr6.1:599970-599989 | MS.gene82805:CDS | 55.0% | |
| GTGGGATGAGATGTGTGTGG+TGG | + | chr6.1:597120-597139 | MS.gene82805:intron | 55.0% | |
| TCGGTGGGATGAGATGTGTG+TGG | + | chr6.1:597117-597136 | MS.gene82805:intron | 55.0% | |
| TGGATGCTGGCCATTGCAGT+TGG | - | chr6.1:599080-599099 | None:intergenic | 55.0% | |
| ! | AGATGTGTGTGGTGGGGGAA+GGG | + | chr6.1:597128-597147 | MS.gene82805:intron | 55.0% |
| !! | AAGAGCTCTGGATCATGCCG+TGG | - | chr6.1:598128-598147 | None:intergenic | 55.0% |
| !! | GCATGGGTTACTGACTCGAC+TGG | - | chr6.1:596963-596982 | None:intergenic | 55.0% |
| AGCTCAGCCTACACAGGCAC+AGG | + | chr6.1:597226-597245 | MS.gene82805:intron | 60.0% | |
| CGCTGTAGCTCAGCCTACAC+AGG | + | chr6.1:597220-597239 | MS.gene82805:intron | 60.0% | |
| GAGCAGCAGCAGCGATGATG+AGG | + | chr6.1:599817-599836 | MS.gene82805:CDS | 60.0% | |
| GATTTACTCCCATCCGCCGC+AGG | - | chr6.1:599049-599068 | None:intergenic | 60.0% | |
| GCTATCGGCAGTCCGATGCT+TGG | - | chr6.1:599438-599457 | None:intergenic | 60.0% | |
| GCTCAGCCTACACAGGCACA+GGG | + | chr6.1:597227-597246 | MS.gene82805:intron | 60.0% | |
| GGTGAGGAGGACTCAAGAGG+TGG | + | chr6.1:599983-600002 | MS.gene82805:CDS | 60.0% | |
| GTAGGCTGAGCTACAGCGCA+GGG | - | chr6.1:597218-597237 | None:intergenic | 60.0% | |
| TCTGGATCATGCCGTGGTGG+AGG | - | chr6.1:598122-598141 | None:intergenic | 60.0% | |
| TGTAGGCTGAGCTACAGCGC+AGG | - | chr6.1:597219-597238 | None:intergenic | 60.0% | |
| ! | ATTGAGAAGCACGGTGGGGC+CGG | - | chr6.1:597253-597272 | None:intergenic | 60.0% |
| ! | GAGATGTGTGTGGTGGGGGA+AGG | + | chr6.1:597127-597146 | MS.gene82805:intron | 60.0% |
| !! | AGCTCTGGATCATGCCGTGG+TGG | - | chr6.1:598125-598144 | None:intergenic | 60.0% |
| AGAACAGGACCTGCGGCGGA+TGG | + | chr6.1:599037-599056 | MS.gene82805:CDS | 65.0% | |
| AGCCTACACAGGCACAGGGC+CGG | + | chr6.1:597231-597250 | MS.gene82805:intron | 65.0% | |
| GAACAGGACCTGCGGCGGAT+GGG | + | chr6.1:599038-599057 | MS.gene82805:CDS | 65.0% | |
| TACCGGAGCTGCCTCCACCA+CGG | + | chr6.1:598108-598127 | MS.gene82805:CDS | 65.0% | |
| ! | TGCCGTGGTGGAGGCAGCTC+CGG | - | chr6.1:598113-598132 | None:intergenic | 70.0% |
| GGCCGGCCCTGTGCCTGTGT+AGG | - | chr6.1:597236-597255 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 595194 | 600108 | 595194 | ID=MS.gene82805 |
| chr6.1 | mRNA | 595194 | 600108 | 595194 | ID=MS.gene82805.t1;Parent=MS.gene82805 |
| chr6.1 | exon | 595194 | 595276 | 595194 | ID=MS.gene82805.t1.exon1;Parent=MS.gene82805.t1 |
| chr6.1 | CDS | 595194 | 595276 | 595194 | ID=cds.MS.gene82805.t1;Parent=MS.gene82805.t1 |
| chr6.1 | exon | 595508 | 595790 | 595508 | ID=MS.gene82805.t1.exon2;Parent=MS.gene82805.t1 |
| chr6.1 | CDS | 595508 | 595790 | 595508 | ID=cds.MS.gene82805.t1;Parent=MS.gene82805.t1 |
| chr6.1 | exon | 598059 | 598460 | 598059 | ID=MS.gene82805.t1.exon3;Parent=MS.gene82805.t1 |
| chr6.1 | CDS | 598059 | 598460 | 598059 | ID=cds.MS.gene82805.t1;Parent=MS.gene82805.t1 |
| chr6.1 | exon | 598975 | 600108 | 598975 | ID=MS.gene82805.t1.exon4;Parent=MS.gene82805.t1 |
| chr6.1 | CDS | 598975 | 600108 | 598975 | ID=cds.MS.gene82805.t1;Parent=MS.gene82805.t1 |
| Gene Sequence |
| Protein sequence |