Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83774.t1 | XP_021827285.1 | 50.4 | 760 | 272 | 7 | 27 | 721 | 334 | 1053 | 1.20E-205 | 726.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83774.t1 | Q99315 | 28.0 | 589 | 291 | 9 | 262 | 721 | 839 | 1423 | 5.9e-55 | 217.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83774.t1 | A0A2N9GDV0 | 37.2 | 1114 | 301 | 13 | 7 | 721 | 15 | 1128 | 1.8e-182 | 649.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene83774 | -0.804102 | 2.54E-49 | -1.69E-46 |
MS.gene049217 | MS.gene83774 | -0.818031 | 2.42E-52 | -1.69E-46 |
MS.gene049285 | MS.gene83774 | -0.8096 | 1.75E-50 | -1.69E-46 |
MS.gene049320 | MS.gene83774 | -0.836729 | 7.89E-57 | -1.69E-46 |
MS.gene049402 | MS.gene83774 | 0.801312 | 9.55E-49 | -1.69E-46 |
MS.gene049483 | MS.gene83774 | 0.818585 | 1.82E-52 | -1.69E-46 |
MS.gene049634 | MS.gene83774 | 0.805624 | 1.22E-49 | -1.69E-46 |
MS.gene050163 | MS.gene83774 | -0.832775 | 7.80E-56 | -1.69E-46 |
MS.gene050165 | MS.gene83774 | -0.845248 | 4.57E-59 | -1.69E-46 |
MS.gene050333 | MS.gene83774 | -0.814411 | 1.56E-51 | -1.69E-46 |
MS.gene050381 | MS.gene83774 | 0.814226 | 1.72E-51 | -1.69E-46 |
MS.gene050504 | MS.gene83774 | -0.842939 | 1.90E-58 | -1.69E-46 |
MS.gene050612 | MS.gene83774 | -0.832301 | 1.02E-55 | -1.69E-46 |
MS.gene050675 | MS.gene83774 | -0.810042 | 1.40E-50 | -1.69E-46 |
MS.gene050699 | MS.gene83774 | -0.806486 | 8.04E-50 | -1.69E-46 |
MS.gene05079 | MS.gene83774 | 0.800066 | 1.72E-48 | -1.69E-46 |
MS.gene050986 | MS.gene83774 | -0.832589 | 8.67E-56 | -1.69E-46 |
MS.gene051127 | MS.gene83774 | 0.827032 | 1.96E-54 | -1.69E-46 |
MS.gene051138 | MS.gene83774 | 0.819914 | 9.04E-53 | -1.69E-46 |
MS.gene051810 | MS.gene83774 | -0.821674 | 3.56E-53 | -1.69E-46 |
MS.gene052112 | MS.gene83774 | 0.86197 | 7.05E-64 | -1.69E-46 |
MS.gene052164 | MS.gene83774 | -0.810252 | 1.26E-50 | -1.69E-46 |
MS.gene053420 | MS.gene83774 | 0.807263 | 5.51E-50 | -1.69E-46 |
MS.gene053561 | MS.gene83774 | 0.820516 | 6.58E-53 | -1.69E-46 |
MS.gene054616 | MS.gene83774 | 0.81264 | 3.83E-51 | -1.69E-46 |
MS.gene054642 | MS.gene83774 | -0.819406 | 1.18E-52 | -1.69E-46 |
MS.gene05470 | MS.gene83774 | -0.816251 | 6.09E-52 | -1.69E-46 |
MS.gene054954 | MS.gene83774 | -0.808657 | 2.78E-50 | -1.69E-46 |
MS.gene055154 | MS.gene83774 | 0.834671 | 2.62E-56 | -1.69E-46 |
MS.gene055362 | MS.gene83774 | -0.81369 | 2.25E-51 | -1.69E-46 |
MS.gene055502 | MS.gene83774 | -0.831229 | 1.88E-55 | -1.69E-46 |
MS.gene055577 | MS.gene83774 | -0.82416 | 9.38E-54 | -1.69E-46 |
MS.gene056550 | MS.gene83774 | 0.811315 | 7.44E-51 | -1.69E-46 |
MS.gene056657 | MS.gene83774 | -0.806239 | 9.06E-50 | -1.69E-46 |
MS.gene058068 | MS.gene83774 | 0.818131 | 2.30E-52 | -1.69E-46 |
MS.gene058419 | MS.gene83774 | -0.802336 | 5.89E-49 | -1.69E-46 |
MS.gene058544 | MS.gene83774 | -0.816671 | 4.90E-52 | -1.69E-46 |
MS.gene058773 | MS.gene83774 | -0.819081 | 1.40E-52 | -1.69E-46 |
MS.gene059022 | MS.gene83774 | -0.839461 | 1.56E-57 | -1.69E-46 |
MS.gene059023 | MS.gene83774 | -0.810249 | 1.27E-50 | -1.69E-46 |
MS.gene059677 | MS.gene83774 | -0.830409 | 2.99E-55 | -1.69E-46 |
MS.gene059718 | MS.gene83774 | -0.811368 | 7.25E-51 | -1.69E-46 |
MS.gene059865 | MS.gene83774 | -0.816873 | 4.42E-52 | -1.69E-46 |
MS.gene059916 | MS.gene83774 | 0.809186 | 2.14E-50 | -1.69E-46 |
MS.gene060762 | MS.gene83774 | -0.81955 | 1.10E-52 | -1.69E-46 |
MS.gene06077 | MS.gene83774 | -0.806889 | 6.61E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83774.t1 | MTR_4g102460 | 65.269 | 167 | 55 | 2 | 1 | 166 | 1 | 165 | 1.04e-56 | 202 |
MS.gene83774.t1 | MTR_8g054490 | 94.286 | 105 | 6 | 0 | 1 | 105 | 1 | 105 | 1.29e-51 | 179 |
MS.gene83774.t1 | MTR_7g105270 | 69.799 | 149 | 45 | 0 | 18 | 166 | 1 | 149 | 8.36e-51 | 185 |
MS.gene83774.t1 | MTR_7g034745 | 94.681 | 94 | 5 | 0 | 1 | 94 | 1 | 94 | 1.83e-47 | 163 |
MS.gene83774.t1 | MTR_7g056297 | 67.669 | 133 | 43 | 0 | 18 | 150 | 1 | 133 | 1.65e-42 | 160 |
MS.gene83774.t1 | MTR_1g105095 | 63.107 | 103 | 38 | 0 | 27 | 129 | 76 | 178 | 2.21e-32 | 124 |
MS.gene83774.t1 | MTR_6g045307 | 24.740 | 481 | 310 | 13 | 266 | 721 | 143 | 596 | 5.84e-31 | 130 |
MS.gene83774.t1 | MTR_1g050845 | 29.592 | 294 | 177 | 9 | 433 | 721 | 453 | 721 | 1.45e-23 | 107 |
MS.gene83774.t1 | MTR_0045s0120 | 67.416 | 89 | 29 | 0 | 18 | 106 | 1 | 89 | 6.00e-22 | 91.7 |
MS.gene83774.t1 | MTR_1g052140 | 29.304 | 273 | 124 | 8 | 261 | 500 | 98 | 334 | 1.18e-20 | 97.4 |
MS.gene83774.t1 | MTR_1361s0010 | 72.414 | 58 | 16 | 0 | 93 | 150 | 1 | 58 | 3.31e-20 | 91.3 |
MS.gene83774.t1 | MTR_7g060240 | 56.311 | 103 | 43 | 2 | 1 | 102 | 1 | 102 | 5.75e-20 | 85.9 |
MS.gene83774.t1 | MTR_2g076860 | 24.479 | 192 | 102 | 1 | 42 | 233 | 72 | 220 | 1.35e-13 | 71.2 |
MS.gene83774.t1 | MTR_0003s0410 | 41.935 | 93 | 53 | 1 | 261 | 353 | 672 | 763 | 9.08e-13 | 72.4 |
MS.gene83774.t1 | MTR_6g060120 | 60.000 | 75 | 28 | 2 | 1 | 74 | 1 | 74 | 1.63e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 116 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGCTGTTAACAGGATTT+TGG | 0.128661 | 3.2:+17101863 | MS.gene83774:CDS |
CTCTACGAGAAGCCATTATT+TGG | 0.166385 | 3.2:+17101337 | MS.gene83774:CDS |
AAGGAAATTGTTCGTCTTCA+TGG | 0.230556 | 3.2:+17101711 | MS.gene83774:CDS |
AGACAACAAATCTTTAAAAT+TGG | 0.231722 | 3.2:+17102182 | MS.gene83774:CDS |
GGAGGATTAGCAGGTCATTT+TGG | 0.239147 | 3.2:+17101372 | MS.gene83774:CDS |
AACTTGGCATTTGGTTGTTT+TGG | 0.251939 | 3.2:-17102242 | None:intergenic |
AATCTTTAAAATTGGAGATT+TGG | 0.253491 | 3.2:+17102190 | MS.gene83774:CDS |
AGTTGTGACGCTTCCAATTC+AGG | 0.261063 | 3.2:+17100817 | MS.gene83774:CDS |
CTTCAGTTTGTCCATCTGTC+TGG | 0.267583 | 3.2:-17101845 | None:intergenic |
TAAATGTTTCTCCACTCTTA+TGG | 0.272967 | 3.2:-17098880 | None:intergenic |
TACCCAAGAAGCATTCTTAC+AGG | 0.289115 | 3.2:+17098901 | MS.gene83774:CDS |
AGTGTTTGGTCGTTTCTTCT+TGG | 0.293836 | 3.2:-17098201 | None:intergenic |
CTTGGTGACAACTTGGCATT+TGG | 0.298252 | 3.2:-17102251 | None:intergenic |
GACGCTTCCAATTCAGGAAT+TGG | 0.321227 | 3.2:+17100823 | MS.gene83774:CDS |
TCTCTGAATGATTGTCTTTG+TGG | 0.337173 | 3.2:-17098372 | None:intergenic |
CAAAGACCCGTTCAACAGTT+TGG | 0.339906 | 3.2:-17098464 | None:intergenic |
ATTCCTGTAAGAATGCTTCT+TGG | 0.340428 | 3.2:-17098904 | None:intergenic |
CTCTAGGATTACTATAAATA+AGG | 0.341795 | 3.2:+17102624 | MS.gene83774:intron |
TGTAGCTTTCCTTCAAAATC+AGG | 0.348866 | 3.2:-17098417 | None:intergenic |
TTCAGTTTGTCCATCTGTCT+GGG | 0.358457 | 3.2:-17101844 | None:intergenic |
TTTGAATATCTCTAAGTGTT+TGG | 0.372498 | 3.2:-17098215 | None:intergenic |
ATCATGGGCTTCCCAAATAA+TGG | 0.381536 | 3.2:-17101349 | None:intergenic |
AACCGCGCCAATTCCTGAAT+TGG | 0.382822 | 3.2:-17100830 | None:intergenic |
GACAAACTGAAGCTGTTAAC+AGG | 0.383273 | 3.2:+17101856 | MS.gene83774:CDS |
CAGTTCAACTCCAACAATAC+TGG | 0.388842 | 3.2:+17098832 | MS.gene83774:CDS |
GGCATAAAATTCTTTATCAT+AGG | 0.389535 | 3.2:-17100923 | None:intergenic |
CCGCTTACAGATTGCATAAA+GGG | 0.395776 | 3.2:+17100682 | MS.gene83774:intron |
CCCGCTTACAGATTGCATAA+AGG | 0.395951 | 3.2:+17100681 | MS.gene83774:intron |
TTTGTGCTTGCTCGGTCCAT+TGG | 0.405567 | 3.2:-17100714 | None:intergenic |
AAATGCACAACAAGCACAAT+TGG | 0.413256 | 3.2:+17098281 | MS.gene83774:CDS |
AACCTACTTCGGAGCTTTAT+CGG | 0.415868 | 3.2:+17101888 | MS.gene83774:CDS |
CGTCTAATGTCCAGTATTGT+TGG | 0.417557 | 3.2:-17098842 | None:intergenic |
AATTCAACTAATCAAGCTAC+TGG | 0.420334 | 3.2:+17101966 | MS.gene83774:CDS |
TTACAGTTTCTTGTAACTGT+TGG | 0.421464 | 3.2:-17098260 | None:intergenic |
AGTACCCATCTTCCTCCATA+AGG | 0.423435 | 3.2:-17101793 | None:intergenic |
TTCCTGTAAGAATGCTTCTT+GGG | 0.424057 | 3.2:-17098903 | None:intergenic |
TTAAAATTGGAGATTTGGTA+TGG | 0.425994 | 3.2:+17102195 | MS.gene83774:CDS |
TCCGTTCTTACTAAAACATA+AGG | 0.427155 | 3.2:+17101092 | MS.gene83774:CDS |
CAGTATTGTTGGAGTTGAAC+TGG | 0.432608 | 3.2:-17098831 | None:intergenic |
CACTGATTCGCAATCCTCTC+AGG | 0.433846 | 3.2:+17101254 | MS.gene83774:CDS |
TCTACGAGAAGCCATTATTT+GGG | 0.435089 | 3.2:+17101338 | MS.gene83774:CDS |
AGTTGCTGACTTATACTTCA+AGG | 0.436251 | 3.2:+17101692 | MS.gene83774:CDS |
ACTATGCAAATGAAAGTCAT+TGG | 0.441211 | 3.2:+17101171 | MS.gene83774:CDS |
TGAAGAAGCATGCTTCCATT+TGG | 0.441960 | 3.2:+17098538 | MS.gene83774:CDS |
ATCCAGATGAGTTCGTTGAT+TGG | 0.442139 | 3.2:+17098439 | MS.gene83774:CDS |
GTTTGGTCGTTTCTTCTTGG+AGG | 0.442999 | 3.2:-17098198 | None:intergenic |
AGCCAATCAACGAACTCATC+TGG | 0.446536 | 3.2:-17098441 | None:intergenic |
TTGGCTCCAAACTGTTGAAC+GGG | 0.451354 | 3.2:+17098458 | MS.gene83774:CDS |
AATGACTTTCATTTGCATAG+TGG | 0.452688 | 3.2:-17101169 | None:intergenic |
TTCGAACACCTGGTCAAAGT+TGG | 0.453463 | 3.2:-17100791 | None:intergenic |
AAAACAATGGGATCTCATCT+TGG | 0.455984 | 3.2:+17101920 | MS.gene83774:CDS |
ATCAGCTCTTGGTGACAACT+TGG | 0.464395 | 3.2:-17102258 | None:intergenic |
GAGAACCTTATGGAGGAAGA+TGG | 0.467806 | 3.2:+17101788 | MS.gene83774:CDS |
TTGAAAGGACCATCAGCTCT+TGG | 0.469552 | 3.2:-17102269 | None:intergenic |
TCATTTGCATAGTGGCAAGT+AGG | 0.470951 | 3.2:-17101161 | None:intergenic |
AACGTCTGATTGCATGTGTT+GGG | 0.474342 | 3.2:-17098307 | None:intergenic |
GTTCCGTATGCTACCTCAAA+AGG | 0.478007 | 3.2:-17101996 | None:intergenic |
ACAATCGCTCGTTACCTTGG+TGG | 0.488980 | 3.2:+17098786 | MS.gene83774:CDS |
CATTTGCATAGTGGCAAGTA+GGG | 0.490498 | 3.2:-17101160 | None:intergenic |
TACTGATGTTTATCTGATGA+TGG | 0.491367 | 3.2:-17102047 | None:intergenic |
GCCCATGATGGAGGATTAGC+AGG | 0.491823 | 3.2:+17101363 | MS.gene83774:CDS |
TTGTCCGAGCCTTGCAACAT+TGG | 0.495282 | 3.2:+17100947 | MS.gene83774:CDS |
TCGAACACCTGGTCAAAGTT+GGG | 0.496804 | 3.2:-17100790 | None:intergenic |
TTGTTGCAGATGCTCTTAGC+AGG | 0.500657 | 3.2:+17101130 | MS.gene83774:CDS |
CAACGTCTGATTGCATGTGT+TGG | 0.501216 | 3.2:-17098308 | None:intergenic |
GACCTGCTAATCCTCCATCA+TGG | 0.508910 | 3.2:-17101365 | None:intergenic |
AATCAATGACAATGCTTACA+AGG | 0.509061 | 3.2:+17102304 | MS.gene83774:CDS |
CAAACAATCGCTCGTTACCT+TGG | 0.510512 | 3.2:+17098783 | MS.gene83774:CDS |
AACATCTCTATCAGAAGTGA+TGG | 0.512734 | 3.2:-17101745 | None:intergenic |
GACTCCAATGTTGCAAGGCT+CGG | 0.513210 | 3.2:-17100951 | None:intergenic |
AGAAGCATGCTTCCATTTGG+TGG | 0.517055 | 3.2:+17098541 | MS.gene83774:CDS |
AACACTTAGAGATATTCAAA+TGG | 0.522436 | 3.2:+17098218 | MS.gene83774:CDS |
TCAGTTTGTCCATCTGTCTG+GGG | 0.535123 | 3.2:-17101843 | None:intergenic |
AGCCCTTCCCAACTTTGACC+AGG | 0.535813 | 3.2:+17100783 | MS.gene83774:CDS |
ATGTTGCAAGGCTCGGACAA+TGG | 0.549135 | 3.2:-17100944 | None:intergenic |
ACCTGCTAATCCTCCATCAT+GGG | 0.552793 | 3.2:-17101364 | None:intergenic |
TCAATCGCAGACATGCCGCT+TGG | 0.555509 | 3.2:+17101049 | MS.gene83774:CDS |
CACAACTTACTTCGAACACC+TGG | 0.555960 | 3.2:-17100801 | None:intergenic |
ATTATTTGGGAAGCCCATGA+TGG | 0.557585 | 3.2:+17101351 | MS.gene83774:CDS |
GAAGTGCGACATTCATGAAA+GGG | 0.562630 | 3.2:+17098755 | MS.gene83774:CDS |
CAGTTTGTCCATCTGTCTGG+GGG | 0.573970 | 3.2:-17101842 | None:intergenic |
GAAGCATGCTTCCATTTGGT+GGG | 0.576938 | 3.2:+17098542 | MS.gene83774:CDS |
ACACCTGGTCAAAGTTGGGA+AGG | 0.579818 | 3.2:-17100786 | None:intergenic |
ATTGGCTCCAAACTGTTGAA+CGG | 0.580900 | 3.2:+17098457 | MS.gene83774:CDS |
TACCGATAAAGCTCCGAAGT+AGG | 0.583170 | 3.2:-17101890 | None:intergenic |
AGAGCACTGAGGAATACATA+AGG | 0.585072 | 3.2:-17101316 | None:intergenic |
TGAAGTGCGACATTCATGAA+AGG | 0.588057 | 3.2:+17098754 | MS.gene83774:CDS |
ATTCAGAGACAACGACATCA+AGG | 0.588760 | 3.2:+17098386 | MS.gene83774:CDS |
AAAACAAAGCGAGCCCGTGA+AGG | 0.589611 | 3.2:+17098573 | MS.gene83774:CDS |
TTTAGTGAAAAGCTCAACAA+TGG | 0.590823 | 3.2:+17100883 | MS.gene83774:CDS |
AAGTTGTCACCAAGAGCTGA+TGG | 0.598597 | 3.2:+17102260 | MS.gene83774:CDS |
TATTCGTTTAGCCATAAGAG+TGG | 0.600070 | 3.2:+17098869 | MS.gene83774:CDS |
AGAACCTTATGGAGGAAGAT+GGG | 0.600585 | 3.2:+17101789 | MS.gene83774:CDS |
CTGAGAGGATTGCGAATCAG+TGG | 0.600915 | 3.2:-17101253 | None:intergenic |
ATTTGGGAAGCCCATGATGG+AGG | 0.604783 | 3.2:+17101354 | MS.gene83774:CDS |
CATTGGATTTGAGACAGTCA+AGG | 0.605582 | 3.2:+17101188 | MS.gene83774:CDS |
TTCTTACTAAAACATAAGGC+GGG | 0.617806 | 3.2:+17101096 | MS.gene83774:CDS |
TGCATGAACAAGTTCGCCAA+CGG | 0.617808 | 3.2:+17102111 | MS.gene83774:CDS |
GGCGCGGTTCTATGTCAAGA+AGG | 0.618948 | 3.2:+17100844 | MS.gene83774:CDS |
TTATCTTGATAATAATGAGA+AGG | 0.621198 | 3.2:-17098654 | None:intergenic |
CACCTGGTCAAAGTTGGGAA+GGG | 0.621586 | 3.2:-17100785 | None:intergenic |
TAAAGGGAGATCAATTCCAA+TGG | 0.621858 | 3.2:+17100698 | MS.gene83774:CDS |
GTTCTTACTAAAACATAAGG+CGG | 0.624357 | 3.2:+17101095 | MS.gene83774:CDS |
CAGGACTACTACAGACATGA+GGG | 0.625095 | 3.2:+17101273 | MS.gene83774:CDS |
GATGATGGAGTCAAGTCTAA+CGG | 0.626466 | 3.2:-17102032 | None:intergenic |
TCAGGACTACTACAGACATG+AGG | 0.632763 | 3.2:+17101272 | MS.gene83774:CDS |
GTATAAGTCAGCAACTTGAA+CGG | 0.634263 | 3.2:-17101685 | None:intergenic |
GTAATGACTCCAATGTTGCA+AGG | 0.650624 | 3.2:-17100956 | None:intergenic |
GTCAAGTCTAACGGACTGTG+TGG | 0.657876 | 3.2:-17102023 | None:intergenic |
GTGCGACATTCATGAAAGGG+AGG | 0.658783 | 3.2:+17098758 | MS.gene83774:CDS |
ATAAGAAGAATTCTCAGTGG+AGG | 0.665480 | 3.2:-17098931 | None:intergenic |
TTCCAATTCAGGAATTGGCG+CGG | 0.668895 | 3.2:+17100828 | MS.gene83774:CDS |
CGTCAGTATTTAATCCACCA+AGG | 0.673418 | 3.2:-17098800 | None:intergenic |
ATGTCTGTAGTAGTCCTGAG+AGG | 0.696842 | 3.2:-17101268 | None:intergenic |
GGGATAAGAAGAATTCTCAG+TGG | 0.734712 | 3.2:-17098934 | None:intergenic |
GCTTCTCGTAGAGAGCACTG+AGG | 0.826263 | 3.2:-17101327 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTGTACTATTTTGAA+AGG | - | chr3.2:17102287-17102306 | None:intergenic | 15.0% |
!!! | TTAAATTCTTAAGTCATTTT+TGG | + | chr3.2:17101766-17101785 | MS.gene83774:CDS | 15.0% |
!! | TTAGTGATTAAAGACATTAA+TGG | - | chr3.2:17099701-17099720 | None:intergenic | 20.0% |
!!! | TTATCTTGATAATAATGAGA+AGG | - | chr3.2:17098657-17098676 | None:intergenic | 20.0% |
! | AAATTAGTAAATGGCAAACA+TGG | - | chr3.2:17102575-17102594 | None:intergenic | 25.0% |
! | AACACTTAGAGATATTCAAA+TGG | + | chr3.2:17098218-17098237 | MS.gene83774:CDS | 25.0% |
! | AATGGACACAAATTAGTAAA+TGG | - | chr3.2:17102584-17102603 | None:intergenic | 25.0% |
! | ACATCTTTGAATATGTTTGT+AGG | - | chr3.2:17101460-17101479 | None:intergenic | 25.0% |
! | ACTTATTGTTAATAGTAGAG+TGG | - | chr3.2:17102488-17102507 | None:intergenic | 25.0% |
! | GGCATAAAATTCTTTATCAT+AGG | - | chr3.2:17100926-17100945 | None:intergenic | 25.0% |
! | TCTAATAAATCATCAAGTCT+AGG | - | chr3.2:17100139-17100158 | None:intergenic | 25.0% |
! | TTTGAATATCTCTAAGTGTT+TGG | - | chr3.2:17098218-17098237 | None:intergenic | 25.0% |
!! | ATCCAGATTTTCAAAAGTTT+TGG | + | chr3.2:17101226-17101245 | MS.gene83774:CDS | 25.0% |
!! | CGGTAAAAATCTAAAACAAT+GGG | + | chr3.2:17101908-17101927 | MS.gene83774:CDS | 25.0% |
!! | TCGGTAAAAATCTAAAACAA+TGG | + | chr3.2:17101907-17101926 | MS.gene83774:CDS | 25.0% |
!! | TTAAAATTGGAGATTTGGTA+TGG | + | chr3.2:17102195-17102214 | MS.gene83774:CDS | 25.0% |
!!! | TTCCAAAACTTTTGAAAATC+TGG | - | chr3.2:17101231-17101250 | None:intergenic | 25.0% |
!!! | TTTCAGTCAAAAGTTGTTTT+AGG | - | chr3.2:17100753-17100772 | None:intergenic | 25.0% |
AAAAAGCAAGATCAAGACTT+GGG | + | chr3.2:17098596-17098615 | MS.gene83774:CDS | 30.0% | |
AAATCATCAAGTCTAGGTAT+CGG | - | chr3.2:17100133-17100152 | None:intergenic | 30.0% | |
AATCAATGACAATGCTTACA+AGG | + | chr3.2:17102304-17102323 | MS.gene83774:CDS | 30.0% | |
AATGACTTTCATTTGCATAG+TGG | - | chr3.2:17101172-17101191 | None:intergenic | 30.0% | |
AATTCAACTAATCAAGCTAC+TGG | + | chr3.2:17101966-17101985 | MS.gene83774:CDS | 30.0% | |
ACTATGCAAATGAAAGTCAT+TGG | + | chr3.2:17101171-17101190 | MS.gene83774:CDS | 30.0% | |
AGCATTTGTTCAATTTCTAC+TGG | - | chr3.2:17099806-17099825 | None:intergenic | 30.0% | |
ATGAGCTCTTCATCATAAAT+TGG | - | chr3.2:17099185-17099204 | None:intergenic | 30.0% | |
ATGATGTTAGAAGTTTCCAT+GGG | + | chr3.2:17100608-17100627 | MS.gene83774:intron | 30.0% | |
CATGGTAGTTGAAATAGTAA+TGG | - | chr3.2:17102602-17102621 | None:intergenic | 30.0% | |
CATTACTATTTCAACTACCA+TGG | + | chr3.2:17102600-17102619 | MS.gene83774:intron | 30.0% | |
CCACTCTACTATTAACAATA+AGG | + | chr3.2:17102485-17102504 | MS.gene83774:intron | 30.0% | |
CCTTATTGTTAATAGTAGAG+TGG | - | chr3.2:17102544-17102563 | None:intergenic | 30.0% | |
GATTAAAGACATTAATGGCT+TGG | - | chr3.2:17099696-17099715 | None:intergenic | 30.0% | |
GATTTATTAGATCAGTTGCA+TGG | + | chr3.2:17100148-17100167 | MS.gene83774:intron | 30.0% | |
GTTCTTACTAAAACATAAGG+CGG | + | chr3.2:17101095-17101114 | MS.gene83774:CDS | 30.0% | |
TAAATGTTTCTCCACTCTTA+TGG | - | chr3.2:17098883-17098902 | None:intergenic | 30.0% | |
TACTGATGTTTATCTGATGA+TGG | - | chr3.2:17102050-17102069 | None:intergenic | 30.0% | |
TAGTGAGAGAGAATTTCTAT+TGG | + | chr3.2:17101415-17101434 | MS.gene83774:intron | 30.0% | |
TATTGTTAATAGTAGAGTGG+TGG | - | chr3.2:17102485-17102504 | None:intergenic | 30.0% | |
TCCGTTCTTACTAAAACATA+AGG | + | chr3.2:17101092-17101111 | MS.gene83774:CDS | 30.0% | |
TCTAACTCTTCTTCTTTCTT+AGG | - | chr3.2:17099161-17099180 | None:intergenic | 30.0% | |
TGTGATGTTATAATAGACAG+TGG | + | chr3.2:17099326-17099345 | MS.gene83774:intron | 30.0% | |
TTACAGTTTCTTGTAACTGT+TGG | - | chr3.2:17098263-17098282 | None:intergenic | 30.0% | |
TTCTTACTAAAACATAAGGC+GGG | + | chr3.2:17101096-17101115 | MS.gene83774:CDS | 30.0% | |
TTTAGTGAAAAGCTCAACAA+TGG | + | chr3.2:17100883-17100902 | MS.gene83774:CDS | 30.0% | |
TTTGTTCAATTTCTACTGGA+AGG | - | chr3.2:17099802-17099821 | None:intergenic | 30.0% | |
! | AAGATCGATCTTTGAAAAGA+TGG | - | chr3.2:17100179-17100198 | None:intergenic | 30.0% |
! | AATTTTGCTGAATTATCCGT+TGG | - | chr3.2:17102130-17102149 | None:intergenic | 30.0% |
! | ATTCTATAAGCTGGTCTATT+AGG | - | chr3.2:17099929-17099948 | None:intergenic | 30.0% |
! | GCATATAAAAACCAGTGTTT+TGG | - | chr3.2:17101512-17101531 | None:intergenic | 30.0% |
! | GTAGATATTCCTGATTTTGA+AGG | + | chr3.2:17098408-17098427 | MS.gene83774:CDS | 30.0% |
! | TGTGGATAGATTTTCAAAGA+TGG | + | chr3.2:17101629-17101648 | MS.gene83774:intron | 30.0% |
! | TGTTTCAAATGTCAAGGTTT+TGG | + | chr3.2:17099041-17099060 | MS.gene83774:intron | 30.0% |
! | TTTTACTCCATCTTTGACAA+AGG | - | chr3.2:17099621-17099640 | None:intergenic | 30.0% |
! | TTTTAGATTTTCCCACCAAA+TGG | - | chr3.2:17098556-17098575 | None:intergenic | 30.0% |
! | TTTTCACTAAAGAAGGCTAT+AGG | - | chr3.2:17100874-17100893 | None:intergenic | 30.0% |
!! | AGAAGTATCAAGATCAAGTT+TGG | + | chr3.2:17099498-17099517 | MS.gene83774:intron | 30.0% |
!!! | AAAACTTTTTTGTGCTTGCT+CGG | - | chr3.2:17100725-17100744 | None:intergenic | 30.0% |
!!! | GCCTTATGTTTTAGTAAGAA+CGG | - | chr3.2:17101096-17101115 | None:intergenic | 30.0% |
!!! | TTGTTTTTATCAAGTCCACT+CGG | - | chr3.2:17099665-17099684 | None:intergenic | 30.0% |
AAAACAATGGGATCTCATCT+TGG | + | chr3.2:17101920-17101939 | MS.gene83774:CDS | 35.0% | |
AAACTACAATGGCTCAACAA+AGG | + | chr3.2:17099425-17099444 | MS.gene83774:intron | 35.0% | |
AAATGCACAACAAGCACAAT+TGG | + | chr3.2:17098281-17098300 | MS.gene83774:CDS | 35.0% | |
AACATCTCTATCAGAAGTGA+TGG | - | chr3.2:17101748-17101767 | None:intergenic | 35.0% | |
AAGGAAATTGTTCGTCTTCA+TGG | + | chr3.2:17101711-17101730 | MS.gene83774:CDS | 35.0% | |
ACTACAAACTTGCCAATGAA+TGG | - | chr3.2:17100355-17100374 | None:intergenic | 35.0% | |
ATAAGAAGAATTCTCAGTGG+AGG | - | chr3.2:17098934-17098953 | None:intergenic | 35.0% | |
ATAGGATAAAGCTCATGGTT+TGG | - | chr3.2:17099754-17099773 | None:intergenic | 35.0% | |
ATCTTGATACTTCTGACCAA+TGG | - | chr3.2:17099492-17099511 | None:intergenic | 35.0% | |
ATTCATTGGCAAGTTTGTAG+TGG | + | chr3.2:17100354-17100373 | MS.gene83774:intron | 35.0% | |
ATTCCTGTAAGAATGCTTCT+TGG | - | chr3.2:17098907-17098926 | None:intergenic | 35.0% | |
CATGATGTTAGAAGTTTCCA+TGG | + | chr3.2:17100607-17100626 | MS.gene83774:intron | 35.0% | |
CCAGAGATGGTTTATATGAA+TGG | + | chr3.2:17100260-17100279 | MS.gene83774:intron | 35.0% | |
CCATTCATATAAACCATCTC+TGG | - | chr3.2:17100263-17100282 | None:intergenic | 35.0% | |
CTAACATCATGAATTGACTG+TGG | - | chr3.2:17100598-17100617 | None:intergenic | 35.0% | |
CTCATCCTTACAAACTACAA+TGG | + | chr3.2:17099414-17099433 | MS.gene83774:intron | 35.0% | |
GAAAAAGCAAGATCAAGACT+TGG | + | chr3.2:17098595-17098614 | MS.gene83774:CDS | 35.0% | |
GAACAATAGGATAAAGCTCA+TGG | - | chr3.2:17099759-17099778 | None:intergenic | 35.0% | |
GACCAATGGAAAAATTCACA+AGG | - | chr3.2:17099478-17099497 | None:intergenic | 35.0% | |
GTAATTTCAGCATGTTCTTG+TGG | - | chr3.2:17099956-17099975 | None:intergenic | 35.0% | |
GTATAAGTCAGCAACTTGAA+CGG | - | chr3.2:17101688-17101707 | None:intergenic | 35.0% | |
TAAAGGGAGATCAATTCCAA+TGG | + | chr3.2:17100698-17100717 | MS.gene83774:CDS | 35.0% | |
TATAAAACGAAGCTAACCCA+TGG | - | chr3.2:17100627-17100646 | None:intergenic | 35.0% | |
TATCGGAAATCGATACTTGA+TGG | - | chr3.2:17100116-17100135 | None:intergenic | 35.0% | |
TATTCGTTTAGCCATAAGAG+TGG | + | chr3.2:17098869-17098888 | MS.gene83774:CDS | 35.0% | |
TCATGAATTGACTGTGGAAT+AGG | - | chr3.2:17100592-17100611 | None:intergenic | 35.0% | |
TCTACGAGAAGCCATTATTT+GGG | + | chr3.2:17101338-17101357 | MS.gene83774:CDS | 35.0% | |
TCTCTGAATGATTGTCTTTG+TGG | - | chr3.2:17098375-17098394 | None:intergenic | 35.0% | |
TGTAGCTTTCCTTCAAAATC+AGG | - | chr3.2:17098420-17098439 | None:intergenic | 35.0% | |
TTAATCTGTATCATTCTCCC+CGG | - | chr3.2:17102438-17102457 | None:intergenic | 35.0% | |
TTCCTGTAAGAATGCTTCTT+GGG | - | chr3.2:17098906-17098925 | None:intergenic | 35.0% | |
TTGGGTTTATTTACTGTGGT+GGG | - | chr3.2:17099011-17099030 | None:intergenic | 35.0% | |
TTGTAAAAACTCACTCCAAG+CGG | - | chr3.2:17101067-17101086 | None:intergenic | 35.0% | |
! | AAATGTGGTATCGAACTACA+TGG | + | chr3.2:17099358-17099377 | MS.gene83774:intron | 35.0% |
! | AACCAACAAAGTTACTTTCC+TGG | + | chr3.2:17100501-17100520 | MS.gene83774:intron | 35.0% |
! | AACCTTGACATTTGAAACAC+TGG | - | chr3.2:17099040-17099059 | None:intergenic | 35.0% |
! | AACTTGGCATTTGGTTGTTT+TGG | - | chr3.2:17102245-17102264 | None:intergenic | 35.0% |
! | ACCAACAAAGTTACTTTCCT+GGG | + | chr3.2:17100502-17100521 | MS.gene83774:intron | 35.0% |
! | ACCTTGACATTTGAAACACT+GGG | - | chr3.2:17099039-17099058 | None:intergenic | 35.0% |
! | ACTGCATTTAAAACCAGAGA+TGG | + | chr3.2:17100247-17100266 | MS.gene83774:intron | 35.0% |
! | AGTAACTTTGTTGGTTAGGA+AGG | - | chr3.2:17100497-17100516 | None:intergenic | 35.0% |
! | ATCGATCTTTGAAAAGATGG+TGG | - | chr3.2:17100176-17100195 | None:intergenic | 35.0% |
! | CAGACAAGTTTTTCTGACAA+AGG | - | chr3.2:17098698-17098717 | None:intergenic | 35.0% |
! | CATGAGGGATTTTTGTTCAA+AGG | + | chr3.2:17101288-17101307 | MS.gene83774:CDS | 35.0% |
! | CATTGTAGTTTGTAAGGATG+AGG | - | chr3.2:17099416-17099435 | None:intergenic | 35.0% |
! | CTATCAGAAGTGATGGTTTT+TGG | - | chr3.2:17101741-17101760 | None:intergenic | 35.0% |
! | CTGCATTTTCTTCGAACAAT+AGG | - | chr3.2:17099772-17099791 | None:intergenic | 35.0% |
! | GAAGCTGTTAACAGGATTTT+GGG | + | chr3.2:17101864-17101883 | MS.gene83774:CDS | 35.0% |
! | GGAAAGTAACTTTGTTGGTT+AGG | - | chr3.2:17100501-17100520 | None:intergenic | 35.0% |
! | GTTGAGCTTTTCACTAAAGA+AGG | - | chr3.2:17100881-17100900 | None:intergenic | 35.0% |
! | TACTGGAAAATGTCCTTTTG+AGG | + | chr3.2:17101983-17102002 | MS.gene83774:CDS | 35.0% |
! | TCTGCGATTGATCTTTTGTT+GGG | - | chr3.2:17101040-17101059 | None:intergenic | 35.0% |
! | TGAAGCTGTTAACAGGATTT+TGG | + | chr3.2:17101863-17101882 | MS.gene83774:CDS | 35.0% |
! | TGCCTTGTGAATTTTTCCAT+TGG | + | chr3.2:17099473-17099492 | MS.gene83774:intron | 35.0% |
! | TTGAGCCATTGTAGTTTGTA+AGG | - | chr3.2:17099422-17099441 | None:intergenic | 35.0% |
! | TTTGGGTTTATTTACTGTGG+TGG | - | chr3.2:17099012-17099031 | None:intergenic | 35.0% |
!! | AGAAGGTTTTGTAGAAGTAC+TGG | - | chr3.2:17098982-17099001 | None:intergenic | 35.0% |
!! | AGCTTATGAAGAAGTTGATG+AGG | + | chr3.2:17099118-17099137 | MS.gene83774:intron | 35.0% |
!! | AGCTTTGGGTTTATTTACTG+TGG | - | chr3.2:17099015-17099034 | None:intergenic | 35.0% |
!! | AGTTGCTGACTTATACTTCA+AGG | + | chr3.2:17101692-17101711 | MS.gene83774:CDS | 35.0% |
!! | ATGAACTTGCTATAAACTCG+AGG | + | chr3.2:17102396-17102415 | MS.gene83774:intron | 35.0% |
!! | ATTTTAGTCCCCAAAAAGGA+TGG | + | chr3.2:17100046-17100065 | MS.gene83774:intron | 35.0% |
!! | ATTTTTGGAGAACCTTATGG+AGG | + | chr3.2:17101781-17101800 | MS.gene83774:CDS | 35.0% |
!! | CATGCTATTGACTTTATTCC+TGG | + | chr3.2:17099893-17099912 | MS.gene83774:intron | 35.0% |
!! | TGCAATTTTAGTCCCCAAAA+AGG | + | chr3.2:17100042-17100061 | MS.gene83774:intron | 35.0% |
!! | TTTTTGGGGACTAAAATTGC+AGG | - | chr3.2:17100043-17100062 | None:intergenic | 35.0% |
!!! | CATCATTAGTCTTTTGGCAT+GGG | - | chr3.2:17101665-17101684 | None:intergenic | 35.0% |
!!! | CTGATCGTTATTTGTTTTGC+GGG | - | chr3.2:17098958-17098977 | None:intergenic | 35.0% |
!!! | GAAGGTTTTGTAGAAGTACT+GGG | - | chr3.2:17098981-17099000 | None:intergenic | 35.0% |
!!! | GCTGATCGTTATTTGTTTTG+CGG | - | chr3.2:17098959-17098978 | None:intergenic | 35.0% |
!!! | GGTTAGCTTCGTTTTATAGA+AGG | + | chr3.2:17100629-17100648 | MS.gene83774:intron | 35.0% |
!!! | GTCATTTTTGGAGAACCTTA+TGG | + | chr3.2:17101778-17101797 | MS.gene83774:CDS | 35.0% |
!!! | TGATCGTTATTTGTTTTGCG+GGG | - | chr3.2:17098957-17098976 | None:intergenic | 35.0% |
!!! | TGATCTTGCTTTTTCCTTCA+CGG | - | chr3.2:17098590-17098609 | None:intergenic | 35.0% |
AAAATTGCAGGAACAGCACA+AGG | - | chr3.2:17100031-17100050 | None:intergenic | 40.0% | |
AAATTGCAGGAACAGCACAA+GGG | - | chr3.2:17100030-17100049 | None:intergenic | 40.0% | |
AACGTCTGATTGCATGTGTT+GGG | - | chr3.2:17098310-17098329 | None:intergenic | 40.0% | |
AAGATGTCGAGTATGCCATT+TGG | + | chr3.2:17101473-17101492 | MS.gene83774:intron | 40.0% | |
ACCCAGGAAAGTAACTTTGT+TGG | - | chr3.2:17100506-17100525 | None:intergenic | 40.0% | |
ACCCAGTGTTTCAAATGTCA+AGG | + | chr3.2:17099035-17099054 | MS.gene83774:intron | 40.0% | |
ACCTACTCCTTTGTCAAAGA+TGG | + | chr3.2:17099611-17099630 | MS.gene83774:intron | 40.0% | |
ACTTTGTGCTTGGATTACCT+CGG | + | chr3.2:17101574-17101593 | MS.gene83774:intron | 40.0% | |
AGAACCATCACCATCATCAA+AGG | + | chr3.2:17099092-17099111 | MS.gene83774:intron | 40.0% | |
AGAACCTTATGGAGGAAGAT+GGG | + | chr3.2:17101789-17101808 | MS.gene83774:CDS | 40.0% | |
AGAAGATGACATGCATCCAT+TGG | - | chr3.2:17099536-17099555 | None:intergenic | 40.0% | |
AGTGTTTGGTCGTTTCTTCT+TGG | - | chr3.2:17098204-17098223 | None:intergenic | 40.0% | |
ATAAGCTTCGCCTTTGATGA+TGG | - | chr3.2:17099105-17099124 | None:intergenic | 40.0% | |
ATCATGGGCTTCCCAAATAA+TGG | - | chr3.2:17101352-17101371 | None:intergenic | 40.0% | |
ATCCAGATATGGTGAAAGGT+CGG | - | chr3.2:17102375-17102394 | None:intergenic | 40.0% | |
ATCCAGATGAGTTCGTTGAT+TGG | + | chr3.2:17098439-17098458 | MS.gene83774:CDS | 40.0% | |
ATTATTTGGGAAGCCCATGA+TGG | + | chr3.2:17101351-17101370 | MS.gene83774:CDS | 40.0% | |
ATTCAGAGACAACGACATCA+AGG | + | chr3.2:17098386-17098405 | MS.gene83774:CDS | 40.0% | |
CAACAAAGGTAGTGAAGTGA+AGG | + | chr3.2:17099439-17099458 | MS.gene83774:intron | 40.0% | |
CAAGTACTTCGACCATTCAT+TGG | + | chr3.2:17100340-17100359 | MS.gene83774:intron | 40.0% | |
CAGTATTGTTGGAGTTGAAC+TGG | - | chr3.2:17098834-17098853 | None:intergenic | 40.0% | |
CAGTGGTAGTTGTGAAAATG+TGG | + | chr3.2:17099343-17099362 | MS.gene83774:intron | 40.0% | |
CAGTTCAACTCCAACAATAC+TGG | + | chr3.2:17098832-17098851 | MS.gene83774:CDS | 40.0% | |
CATCATCCAGATATGGTGAA+AGG | - | chr3.2:17102379-17102398 | None:intergenic | 40.0% | |
CATTTGCATAGTGGCAAGTA+GGG | - | chr3.2:17101163-17101182 | None:intergenic | 40.0% | |
CCCTTTATGCAATCTGTAAG+CGG | - | chr3.2:17100685-17100704 | None:intergenic | 40.0% | |
CCGCTTACAGATTGCATAAA+GGG | + | chr3.2:17100682-17100701 | MS.gene83774:intron | 40.0% | |
CCTTTATGCAATCTGTAAGC+GGG | - | chr3.2:17100684-17100703 | None:intergenic | 40.0% | |
CGTCAGTATTTAATCCACCA+AGG | - | chr3.2:17098803-17098822 | None:intergenic | 40.0% | |
CGTCTAATGTCCAGTATTGT+TGG | - | chr3.2:17098845-17098864 | None:intergenic | 40.0% | |
CTCTACGAGAAGCCATTATT+TGG | + | chr3.2:17101337-17101356 | MS.gene83774:CDS | 40.0% | |
CTTGAGCTGACATTGTATGT+AGG | - | chr3.2:17099247-17099266 | None:intergenic | 40.0% | |
CTTGATCTACAGCAAACACA+AGG | + | chr3.2:17100393-17100412 | MS.gene83774:intron | 40.0% | |
CTTTATGCAATCTGTAAGCG+GGG | - | chr3.2:17100683-17100702 | None:intergenic | 40.0% | |
GAAGTGCGACATTCATGAAA+GGG | + | chr3.2:17098755-17098774 | MS.gene83774:CDS | 40.0% | |
GAAGTGGATACCATCAAATC+AGG | + | chr3.2:17100200-17100219 | MS.gene83774:intron | 40.0% | |
GACAAACTGAAGCTGTTAAC+AGG | + | chr3.2:17101856-17101875 | MS.gene83774:CDS | 40.0% | |
GACTCAATTCAAAGAAGCTG+TGG | + | chr3.2:17099721-17099740 | MS.gene83774:intron | 40.0% | |
GATACCATCAAATCAGGCTT+AGG | + | chr3.2:17100206-17100225 | MS.gene83774:intron | 40.0% | |
GCAAGTTCATCATCCAGATA+TGG | - | chr3.2:17102386-17102405 | None:intergenic | 40.0% | |
GGGATAAGAAGAATTCTCAG+TGG | - | chr3.2:17098937-17098956 | None:intergenic | 40.0% | |
GGTTACATAATCACAGCTGA+AGG | + | chr3.2:17100523-17100542 | MS.gene83774:intron | 40.0% | |
GTAATGACTCCAATGTTGCA+AGG | - | chr3.2:17100959-17100978 | None:intergenic | 40.0% | |
TAATCTGTATCATTCTCCCC+GGG | - | chr3.2:17102437-17102456 | None:intergenic | 40.0% | |
TATAGTAATCCTAGAGGCCA+TGG | - | chr3.2:17102620-17102639 | None:intergenic | 40.0% | |
TCAAAGATCGATCTTCGAAG+TGG | + | chr3.2:17100184-17100203 | MS.gene83774:intron | 40.0% | |
TCATTTGCATAGTGGCAAGT+AGG | - | chr3.2:17101164-17101183 | None:intergenic | 40.0% | |
TCCATCTTTGACAAAGGAGT+AGG | - | chr3.2:17099615-17099634 | None:intergenic | 40.0% | |
TGAAGTGCGACATTCATGAA+AGG | + | chr3.2:17098754-17098773 | MS.gene83774:CDS | 40.0% | |
TGTGGACTCATTCTATAAGC+TGG | - | chr3.2:17099938-17099957 | None:intergenic | 40.0% | |
TTCAGTTTGTCCATCTGTCT+GGG | - | chr3.2:17101847-17101866 | None:intergenic | 40.0% | |
TTGAAACACTGGGTAGCTTT+GGG | - | chr3.2:17099029-17099048 | None:intergenic | 40.0% | |
TTGATTCATGAGACGCATGA+AGG | - | chr3.2:17100323-17100342 | None:intergenic | 40.0% | |
TTGGTGTGATGTTGTTCCAA+TGG | + | chr3.2:17099517-17099536 | MS.gene83774:intron | 40.0% | |
TTTGACAAAGGAGTAGGTGT+TGG | - | chr3.2:17099609-17099628 | None:intergenic | 40.0% | |
! | AAATGGCAAACATGGCTTGT+TGG | - | chr3.2:17102567-17102586 | None:intergenic | 40.0% |
! | AACCTACTTCGGAGCTTTAT+CGG | + | chr3.2:17101888-17101907 | MS.gene83774:CDS | 40.0% |
! | AGTGGTGGAATATGAGGTAA+GGG | - | chr3.2:17102470-17102489 | None:intergenic | 40.0% |
! | ATCACAAACTTTTCCAGCAG+TGG | - | chr3.2:17099312-17099331 | None:intergenic | 40.0% |
! | ATTGGCTCCAAACTGTTGAA+CGG | + | chr3.2:17098457-17098476 | MS.gene83774:CDS | 40.0% |
! | CATTGGATTTGAGACAGTCA+AGG | + | chr3.2:17101188-17101207 | MS.gene83774:CDS | 40.0% |
! | GGAGCATTAGATAACCCAAA+GGG | - | chr3.2:17100295-17100314 | None:intergenic | 40.0% |
! | GTCTGCGATTGATCTTTTGT+TGG | - | chr3.2:17101041-17101060 | None:intergenic | 40.0% |
! | TAGTAGAGTGGTGGAATATG+AGG | - | chr3.2:17102476-17102495 | None:intergenic | 40.0% |
! | TGAAGAAGCATGCTTCCATT+TGG | + | chr3.2:17098538-17098557 | MS.gene83774:CDS | 40.0% |
! | TGGAGCATTAGATAACCCAA+AGG | - | chr3.2:17100296-17100315 | None:intergenic | 40.0% |
! | TTTGAAACACTGGGTAGCTT+TGG | - | chr3.2:17099030-17099049 | None:intergenic | 40.0% |
! | TTTTTATCAAGTCCACTCGG+TGG | - | chr3.2:17099662-17099681 | None:intergenic | 40.0% |
!! | AGAGCACTGAGGAATACATA+AGG | - | chr3.2:17101319-17101338 | None:intergenic | 40.0% |
!! | GATGATGGAGTCAAGTCTAA+CGG | - | chr3.2:17102035-17102054 | None:intergenic | 40.0% |
!! | GGATTTTGGGAAACCTACTT+CGG | + | chr3.2:17101877-17101896 | MS.gene83774:CDS | 40.0% |
!! | TACCCAAGAAGCATTCTTAC+AGG | + | chr3.2:17098901-17098920 | MS.gene83774:CDS | 40.0% |
!!! | AAAACCAGTGTTTTGGCCTT+TGG | - | chr3.2:17101505-17101524 | None:intergenic | 40.0% |
!!! | GAACGGCATCATTAGTCTTT+TGG | - | chr3.2:17101671-17101690 | None:intergenic | 40.0% |
!!! | GATCTTGCTTTTTCCTTCAC+GGG | - | chr3.2:17098589-17098608 | None:intergenic | 40.0% |
!!! | GCATCATTAGTCTTTTGGCA+TGG | - | chr3.2:17101666-17101685 | None:intergenic | 40.0% |
!!! | TGTCCTTTTGAGGTAGCATA+CGG | + | chr3.2:17101993-17102012 | MS.gene83774:CDS | 40.0% |
AAGTTGTCACCAAGAGCTGA+TGG | + | chr3.2:17102260-17102279 | MS.gene83774:CDS | 45.0% | |
AATCCTTGTGGAACAGCTTC+TGG | - | chr3.2:17099851-17099870 | None:intergenic | 45.0% | |
AATGGACAGTGATGCCCTTT+GGG | + | chr3.2:17100278-17100297 | MS.gene83774:intron | 45.0% | |
ACAGCTTCTGGTACAACATC+TGG | - | chr3.2:17099839-17099858 | None:intergenic | 45.0% | |
ACCTGCTAATCCTCCATCAT+GGG | - | chr3.2:17101367-17101386 | None:intergenic | 45.0% | |
ACCTTGGGAAGATGTTAGCA+TGG | + | chr3.2:17101551-17101570 | MS.gene83774:intron | 45.0% | |
AGCCAATCAACGAACTCATC+TGG | - | chr3.2:17098444-17098463 | None:intergenic | 45.0% | |
AGGTTGAAGCCATCAACAGT+TGG | + | chr3.2:17100566-17100585 | MS.gene83774:intron | 45.0% | |
AGTACCCATCTTCCTCCATA+AGG | - | chr3.2:17101796-17101815 | None:intergenic | 45.0% | |
AGTTGTGACGCTTCCAATTC+AGG | + | chr3.2:17100817-17100836 | MS.gene83774:CDS | 45.0% | |
ATGAGGTAAGGGATGATGCA+AGG | - | chr3.2:17102459-17102478 | None:intergenic | 45.0% | |
ATGTCTGTAGTAGTCCTGAG+AGG | - | chr3.2:17101271-17101290 | None:intergenic | 45.0% | |
CAAACAATCGCTCGTTACCT+TGG | + | chr3.2:17098783-17098802 | MS.gene83774:CDS | 45.0% | |
CAAAGACCCGTTCAACAGTT+TGG | - | chr3.2:17098467-17098486 | None:intergenic | 45.0% | |
CAACGTCTGATTGCATGTGT+TGG | - | chr3.2:17098311-17098330 | None:intergenic | 45.0% | |
CACAACTTACTTCGAACACC+TGG | - | chr3.2:17100804-17100823 | None:intergenic | 45.0% | |
CAGCTGTGATTATGTAACCC+AGG | - | chr3.2:17100522-17100541 | None:intergenic | 45.0% | |
CAGCTTCTGGTACAACATCT+GGG | - | chr3.2:17099838-17099857 | None:intergenic | 45.0% | |
CAGGACTACTACAGACATGA+GGG | + | chr3.2:17101273-17101292 | MS.gene83774:CDS | 45.0% | |
CCCGCTTACAGATTGCATAA+AGG | + | chr3.2:17100681-17100700 | MS.gene83774:intron | 45.0% | |
CTACCATCACAGAATCCTTC+TGG | - | chr3.2:17101608-17101627 | None:intergenic | 45.0% | |
CTATTAGGAATGACAGCTCC+AGG | - | chr3.2:17099914-17099933 | None:intergenic | 45.0% | |
CTTCAGTTTGTCCATCTGTC+TGG | - | chr3.2:17101848-17101867 | None:intergenic | 45.0% | |
GAAGCATGCTTCCATTTGGT+GGG | + | chr3.2:17098542-17098561 | MS.gene83774:CDS | 45.0% | |
GACGCTTCCAATTCAGGAAT+TGG | + | chr3.2:17100823-17100842 | MS.gene83774:CDS | 45.0% | |
GAGAACCTTATGGAGGAAGA+TGG | + | chr3.2:17101788-17101807 | MS.gene83774:CDS | 45.0% | |
GATCTACAGCAAACACAAGG+AGG | + | chr3.2:17100396-17100415 | MS.gene83774:intron | 45.0% | |
GATGCATGTCATCTTCTCCT+TGG | + | chr3.2:17099539-17099558 | MS.gene83774:intron | 45.0% | |
GCATGTTGAATGTCTCGCAT+TGG | - | chr3.2:17099878-17099897 | None:intergenic | 45.0% | |
GCTTACAAGGTAGAATTGCC+AGG | + | chr3.2:17102317-17102336 | MS.gene83774:intron | 45.0% | |
GGATGAGGATGACTTTGTGT+TGG | - | chr3.2:17099401-17099420 | None:intergenic | 45.0% | |
GGATTCTGTGATGGTAGTTG+TGG | + | chr3.2:17101611-17101630 | MS.gene83774:intron | 45.0% | |
GTAGAATTGCCAGGAACCTA+TGG | + | chr3.2:17102326-17102345 | MS.gene83774:intron | 45.0% | |
GTCAAGTCGAAGAATTGCTG+AGG | + | chr3.2:17099978-17099997 | MS.gene83774:intron | 45.0% | |
GTCGAAGAATTGCTGAGGAA+AGG | + | chr3.2:17099983-17100002 | MS.gene83774:intron | 45.0% | |
GTTAGCATGGACTTTGTGCT+TGG | + | chr3.2:17101564-17101583 | MS.gene83774:intron | 45.0% | |
GTTCCGTATGCTACCTCAAA+AGG | - | chr3.2:17101999-17102018 | None:intergenic | 45.0% | |
GTTTGGTCGTTTCTTCTTGG+AGG | - | chr3.2:17098201-17098220 | None:intergenic | 45.0% | |
TACCGATAAAGCTCCGAAGT+AGG | - | chr3.2:17101893-17101912 | None:intergenic | 45.0% | |
TCAGGACTACTACAGACATG+AGG | + | chr3.2:17101272-17101291 | MS.gene83774:CDS | 45.0% | |
TCAGTTTGTCCATCTGTCTG+GGG | - | chr3.2:17101846-17101865 | None:intergenic | 45.0% | |
TCCATGCTAACATCTTCCCA+AGG | - | chr3.2:17101555-17101574 | None:intergenic | 45.0% | |
TCGAACACCTGGTCAAAGTT+GGG | - | chr3.2:17100793-17100812 | None:intergenic | 45.0% | |
TGAAAGGTCGGCAACATTGA+AGG | - | chr3.2:17102363-17102382 | None:intergenic | 45.0% | |
TGCATGAACAAGTTCGCCAA+CGG | + | chr3.2:17102111-17102130 | MS.gene83774:CDS | 45.0% | |
TGGAATAGGCCAACTGTTGA+TGG | - | chr3.2:17100578-17100597 | None:intergenic | 45.0% | |
TGTTGAATGTCTCGCATTGG+CGG | - | chr3.2:17099875-17099894 | None:intergenic | 45.0% | |
TTAACTCCATTACCACCGAG+TGG | + | chr3.2:17099647-17099666 | MS.gene83774:intron | 45.0% | |
TTCCAATTCAGGAATTGGCG+CGG | + | chr3.2:17100828-17100847 | MS.gene83774:CDS | 45.0% | |
TTCGAACACCTGGTCAAAGT+TGG | - | chr3.2:17100794-17100813 | None:intergenic | 45.0% | |
TTGAAAGGACCATCAGCTCT+TGG | - | chr3.2:17102272-17102291 | None:intergenic | 45.0% | |
TTGGCTCCAAACTGTTGAAC+GGG | + | chr3.2:17098458-17098477 | MS.gene83774:CDS | 45.0% | |
TTGTTGCAGATGCTCTTAGC+AGG | + | chr3.2:17101130-17101149 | MS.gene83774:CDS | 45.0% | |
TTTCAACTACCATGGCCTCT+AGG | + | chr3.2:17102608-17102627 | MS.gene83774:intron | 45.0% | |
! | AGAAGCATGCTTCCATTTGG+TGG | + | chr3.2:17098541-17098560 | MS.gene83774:CDS | 45.0% |
! | ATCAGCTCTTGGTGACAACT+TGG | - | chr3.2:17102261-17102280 | None:intergenic | 45.0% |
! | CTCCAGCTTCCATCCTTTTT+GGG | - | chr3.2:17100058-17100077 | None:intergenic | 45.0% |
! | CTTGGTGACAACTTGGCATT+TGG | - | chr3.2:17102254-17102273 | None:intergenic | 45.0% |
! | GAGTGGTGGAATATGAGGTA+AGG | - | chr3.2:17102471-17102490 | None:intergenic | 45.0% |
! | TAGGCGTCTCTTTCAAGTCT+TGG | - | chr3.2:17101441-17101460 | None:intergenic | 45.0% |
! | TCCAGCTTCCATCCTTTTTG+GGG | - | chr3.2:17100057-17100076 | None:intergenic | 45.0% |
! | TCGAGTATGCCATTTGGCAA+AGG | + | chr3.2:17101479-17101498 | MS.gene83774:intron | 45.0% |
! | TCTCCAGCTTCCATCCTTTT+TGG | - | chr3.2:17100059-17100078 | None:intergenic | 45.0% |
! | TGTCAGCTCAAGAAGAGCAT+TGG | + | chr3.2:17099255-17099274 | MS.gene83774:intron | 45.0% |
!! | ACTGTGGTGGGTTTAAGAGA+AGG | - | chr3.2:17098999-17099018 | None:intergenic | 45.0% |
!! | ATGAGACGCATGAAGGTACT+TGG | - | chr3.2:17100316-17100335 | None:intergenic | 45.0% |
!! | ATGGTGATGGTTCTTCGTGT+TGG | - | chr3.2:17099086-17099105 | None:intergenic | 45.0% |
!! | CTCAAGAAGAGCATTGGTTG+AGG | + | chr3.2:17099261-17099280 | MS.gene83774:intron | 45.0% |
!! | GGAGGATTAGCAGGTCATTT+TGG | + | chr3.2:17101372-17101391 | MS.gene83774:CDS | 45.0% |
!! | TATTCGAGTTGACTCCAGCA+AGG | + | chr3.2:17100546-17100565 | MS.gene83774:intron | 45.0% |
!! | TTCGCCTTTGATGATGGTGA+TGG | - | chr3.2:17099099-17099118 | None:intergenic | 45.0% |
AAAACAAAGCGAGCCCGTGA+AGG | + | chr3.2:17098573-17098592 | MS.gene83774:CDS | 50.0% | |
AACCGCGCCAATTCCTGAAT+TGG | - | chr3.2:17100833-17100852 | None:intergenic | 50.0% | |
AAGGCCAAAGGCCAAAACAC+TGG | + | chr3.2:17101498-17101517 | MS.gene83774:intron | 50.0% | |
ACAATCGCTCGTTACCTTGG+TGG | + | chr3.2:17098786-17098805 | MS.gene83774:CDS | 50.0% | |
ACACCTGGTCAAAGTTGGGA+AGG | - | chr3.2:17100789-17100808 | None:intergenic | 50.0% | |
ACGCCAGAAGGATTCTGTGA+TGG | + | chr3.2:17101602-17101621 | MS.gene83774:intron | 50.0% | |
AGGACGAGTTCTGTTCAACC+CGG | + | chr3.2:17102416-17102435 | MS.gene83774:intron | 50.0% | |
ATCTTCTCCTTGGAAGACCC+TGG | + | chr3.2:17099549-17099568 | MS.gene83774:intron | 50.0% | |
ATGTTGCAAGGCTCGGACAA+TGG | - | chr3.2:17100947-17100966 | None:intergenic | 50.0% | |
ATTTGGGAAGCCCATGATGG+AGG | + | chr3.2:17101354-17101373 | MS.gene83774:CDS | 50.0% | |
CACCTGGTCAAAGTTGGGAA+GGG | - | chr3.2:17100788-17100807 | None:intergenic | 50.0% | |
CAGTTTGTCCATCTGTCTGG+GGG | - | chr3.2:17101845-17101864 | None:intergenic | 50.0% | |
CATCAAATCAGGCTTAGGCC+AGG | + | chr3.2:17100211-17100230 | MS.gene83774:intron | 50.0% | |
CTGAGAGGATTGCGAATCAG+TGG | - | chr3.2:17101256-17101275 | None:intergenic | 50.0% | |
GAAGGTTGCTGAGACACCAT+AGG | - | chr3.2:17102345-17102364 | None:intergenic | 50.0% | |
GAATGGACAGTGATGCCCTT+TGG | + | chr3.2:17100277-17100296 | MS.gene83774:intron | 50.0% | |
GACCTGCTAATCCTCCATCA+TGG | - | chr3.2:17101368-17101387 | None:intergenic | 50.0% | |
GACTCCAATGTTGCAAGGCT+CGG | - | chr3.2:17100954-17100973 | None:intergenic | 50.0% | |
GAGCTCATTGTTGCTGACCA+TGG | + | chr3.2:17099197-17099216 | MS.gene83774:intron | 50.0% | |
GCAGTCTTCCATTCATCTCC+TGG | - | chr3.2:17100232-17100251 | None:intergenic | 50.0% | |
GGTAAGGGATGATGCAAGGT+AGG | - | chr3.2:17102511-17102530 | None:intergenic | 50.0% | |
GTACCAGAAGCTGTTCCACA+AGG | + | chr3.2:17099845-17099864 | MS.gene83774:intron | 50.0% | |
GTGCGACATTCATGAAAGGG+AGG | + | chr3.2:17098758-17098777 | MS.gene83774:CDS | 50.0% | |
TCCCCAAAAAGGATGGAAGC+TGG | + | chr3.2:17100053-17100072 | MS.gene83774:intron | 50.0% | |
TGCCGACCTTTCACCATATC+TGG | + | chr3.2:17102370-17102389 | MS.gene83774:intron | 50.0% | |
TTGTCCGAGCCTTGCAACAT+TGG | + | chr3.2:17100947-17100966 | MS.gene83774:CDS | 50.0% | |
TTTGTGCTTGCTCGGTCCAT+TGG | - | chr3.2:17100717-17100736 | None:intergenic | 50.0% | |
! | ACATCTTCCCAAGGTGCTTC+TGG | - | chr3.2:17101546-17101565 | None:intergenic | 50.0% |
! | CTGGCCTAAGCCTGATTTGA+TGG | - | chr3.2:17100213-17100232 | None:intergenic | 50.0% |
! | TCAAGTCCACTCGGTGGTAA+TGG | - | chr3.2:17099656-17099675 | None:intergenic | 50.0% |
! | TGCCATTTGGCAAAGGCCAA+AGG | + | chr3.2:17101486-17101505 | MS.gene83774:intron | 50.0% |
!! | CACTGATTCGCAATCCTCTC+AGG | + | chr3.2:17101254-17101273 | MS.gene83774:CDS | 50.0% |
!! | GTCAAGTCTAACGGACTGTG+TGG | - | chr3.2:17102026-17102045 | None:intergenic | 50.0% |
!! | GTTGATGGCTTCAACCTTGC+TGG | - | chr3.2:17100563-17100582 | None:intergenic | 50.0% |
AGCACGACGATCGTATTGCC+AGG | - | chr3.2:17099570-17099589 | None:intergenic | 55.0% | |
AGCCCTTCCCAACTTTGACC+AGG | + | chr3.2:17100783-17100802 | MS.gene83774:CDS | 55.0% | |
CAGCAGTGGTGCAACGAGTA+TGG | - | chr3.2:17099298-17099317 | None:intergenic | 55.0% | |
CATACTCGTTGCACCACTGC+TGG | + | chr3.2:17099296-17099315 | MS.gene83774:intron | 55.0% | |
CGTATTGCCAGGGTCTTCCA+AGG | - | chr3.2:17099559-17099578 | None:intergenic | 55.0% | |
GACGAGTTCTGTTCAACCCG+GGG | + | chr3.2:17102418-17102437 | MS.gene83774:intron | 55.0% | |
GCACGACGATCGTATTGCCA+GGG | - | chr3.2:17099569-17099588 | None:intergenic | 55.0% | |
GCTGAGACACCATAGGTTCC+TGG | - | chr3.2:17102338-17102357 | None:intergenic | 55.0% | |
GGACGAGTTCTGTTCAACCC+GGG | + | chr3.2:17102417-17102436 | MS.gene83774:intron | 55.0% | |
GGCGCGGTTCTATGTCAAGA+AGG | + | chr3.2:17100844-17100863 | MS.gene83774:CDS | 55.0% | |
GGCTTAGGCCAGGAGATGAA+TGG | + | chr3.2:17100221-17100240 | MS.gene83774:intron | 55.0% | |
TCAATCGCAGACATGCCGCT+TGG | + | chr3.2:17101049-17101068 | MS.gene83774:CDS | 55.0% | |
TGATCACCAGAGACTCGCCA+TGG | - | chr3.2:17099217-17099236 | None:intergenic | 55.0% | |
! | GCCCATGATGGAGGATTAGC+AGG | + | chr3.2:17101363-17101382 | MS.gene83774:CDS | 55.0% |
! | GGCCTTTGGCCTTTGCCAAA+TGG | - | chr3.2:17101491-17101510 | None:intergenic | 55.0% |
!! | CCCAAGGTGCTTCTGGAACA+GGG | - | chr3.2:17101539-17101558 | None:intergenic | 55.0% |
!! | CCCTGTTCCAGAAGCACCTT+GGG | + | chr3.2:17101536-17101555 | MS.gene83774:intron | 55.0% |
!! | GCTTCTCGTAGAGAGCACTG+AGG | - | chr3.2:17101330-17101349 | None:intergenic | 55.0% |
!! | TCCCAAGGTGCTTCTGGAAC+AGG | - | chr3.2:17101540-17101559 | None:intergenic | 55.0% |
!! | TCCCTGTTCCAGAAGCACCT+TGG | + | chr3.2:17101535-17101554 | MS.gene83774:intron | 55.0% |
ACCTCGGACTCAACGCCAGA+AGG | + | chr3.2:17101590-17101609 | MS.gene83774:intron | 60.0% | |
GCTAGTCACCCCCAGACAGA+TGG | + | chr3.2:17101834-17101853 | MS.gene83774:CDS | 60.0% | |
TGCTGACCATGGCGAGTCTC+TGG | + | chr3.2:17099208-17099227 | MS.gene83774:intron | 60.0% | |
! | CGCATTGGCGGCAATCCTTG+TGG | - | chr3.2:17099863-17099882 | None:intergenic | 60.0% |
! | TCCTTCTGGCGTTGAGTCCG+AGG | - | chr3.2:17101594-17101613 | None:intergenic | 60.0% |
!! | GGTGCTTCTGGAACAGGGAG+TGG | - | chr3.2:17101534-17101553 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 17098195 | 17102644 | 17098195 | ID=MS.gene83774 |
chr3.2 | mRNA | 17098195 | 17102644 | 17098195 | ID=MS.gene83774.t1;Parent=MS.gene83774 |
chr3.2 | exon | 17098195 | 17098981 | 17098195 | ID=MS.gene83774.t1.exon1;Parent=MS.gene83774.t1 |
chr3.2 | CDS | 17098195 | 17098981 | 17098195 | ID=cds.MS.gene83774.t1;Parent=MS.gene83774.t1 |
chr3.2 | exon | 17100692 | 17101416 | 17100692 | ID=MS.gene83774.t1.exon2;Parent=MS.gene83774.t1 |
chr3.2 | CDS | 17100692 | 17101416 | 17100692 | ID=cds.MS.gene83774.t1;Parent=MS.gene83774.t1 |
chr3.2 | exon | 17101675 | 17102325 | 17101675 | ID=MS.gene83774.t1.exon3;Parent=MS.gene83774.t1 |
chr3.2 | CDS | 17101675 | 17102325 | 17101675 | ID=cds.MS.gene83774.t1;Parent=MS.gene83774.t1 |
chr3.2 | exon | 17102630 | 17102644 | 17102630 | ID=MS.gene83774.t1.exon4;Parent=MS.gene83774.t1 |
chr3.2 | CDS | 17102630 | 17102644 | 17102630 | ID=cds.MS.gene83774.t1;Parent=MS.gene83774.t1 |
Gene Sequence |
Protein sequence |