AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059916


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059916.t1 MTR_4g107970 87.522 577 16 5 1 526 42 613 0.0 994
MS.gene059916.t1 MTR_4g107970 91.132 530 14 4 25 526 12 536 0.0 961
MS.gene059916.t1 MTR_7g009730 39.736 531 243 18 25 509 59 558 2.16e-87 281
MS.gene059916.t1 MTR_3g053330 41.786 280 87 6 170 435 226 443 1.92e-56 196
MS.gene059916.t1 MTR_2g088000 38.147 367 167 11 74 437 247 556 3.61e-52 187
MS.gene059916.t1 MTR_4g132430 43.299 291 122 8 135 424 76 324 1.60e-50 177
MS.gene059916.t1 MTR_7g110720 41.912 272 96 4 169 437 163 375 1.17e-49 176
MS.gene059916.t1 MTR_4g132430 44.330 291 119 9 135 424 210 458 1.23e-49 178
MS.gene059916.t1 MTR_7g110720 41.912 272 96 4 169 437 190 402 1.38e-49 176
MS.gene059916.t1 MTR_4g094412 47.170 265 117 7 177 435 225 472 1.46e-49 177
MS.gene059916.t1 MTR_4g094412 47.170 265 117 7 177 435 216 463 1.68e-49 177
MS.gene059916.t1 MTR_2g023930 42.508 327 164 9 116 437 223 530 6.24e-45 166
MS.gene059916.t1 MTR_2g045360 38.194 288 130 9 161 447 181 421 1.45e-43 160
MS.gene059916.t1 MTR_4g049790 51.948 154 61 3 180 333 297 437 1.89e-42 159
MS.gene059916.t1 MTR_4g049760 63.810 105 38 0 180 284 275 379 2.89e-41 156
MS.gene059916.t1 MTR_4g047580 30.805 435 220 17 25 437 117 492 1.43e-34 137
MS.gene059916.t1 MTR_4g007060 57.500 80 32 2 178 255 109 188 2.60e-25 105
MS.gene059916.t1 MTR_4g007060 48.214 112 53 3 178 287 143 251 3.25e-25 106
MS.gene059916.t1 MTR_1g013760 51.087 92 45 0 178 269 123 214 6.16e-25 105
MS.gene059916.t1 MTR_5g074400 45.946 111 52 3 149 255 373 479 6.37e-25 108
MS.gene059916.t1 MTR_5g074400 52.459 61 27 2 195 255 243 301 1.30e-13 73.9
MS.gene059916.t1 MTR_1g013790 45.918 98 51 1 176 271 80 177 1.29e-24 103
MS.gene059916.t1 MTR_3g106060 63.333 60 22 0 194 253 137 196 1.72e-24 103
MS.gene059916.t1 MTR_5g094430 34.637 179 99 3 93 271 145 305 3.94e-24 105
MS.gene059916.t1 MTR_5g094430 39.252 107 53 4 195 291 66 170 3.31e-12 68.9
MS.gene059916.t1 MTR_5g094430 34.637 179 99 3 93 271 167 327 4.39e-24 105
MS.gene059916.t1 MTR_5g094430 39.252 107 53 4 195 291 88 192 2.91e-12 68.9
MS.gene059916.t1 MTR_3g031220 52.564 78 36 1 178 255 348 424 8.38e-24 105
MS.gene059916.t1 MTR_3g031220 49.206 63 30 2 195 257 198 258 2.34e-13 72.8
MS.gene059916.t1 MTR_5g094430 34.637 179 99 3 93 271 279 439 1.51e-23 104
MS.gene059916.t1 MTR_5g094430 50.820 61 28 2 195 255 200 258 7.29e-12 68.2
MS.gene059916.t1 MTR_3g056100 45.794 107 53 2 149 255 373 474 3.07e-23 103
MS.gene059916.t1 MTR_3g056100 49.180 61 29 2 195 255 243 301 1.29e-11 67.4
MS.gene059916.t1 MTR_3g056100 45.794 107 53 2 149 255 360 461 3.37e-23 103
MS.gene059916.t1 MTR_3g056100 49.180 61 29 2 195 255 243 301 1.41e-11 67.4
MS.gene059916.t1 MTR_3g056100 40.625 128 68 3 149 273 229 351 3.39e-23 102
MS.gene059916.t1 MTR_3g056100 49.180 61 29 2 195 255 99 157 1.52e-11 67.0
MS.gene059916.t1 MTR_3g056100 45.794 107 53 2 149 255 216 317 3.97e-23 102
MS.gene059916.t1 MTR_3g056100 49.180 61 29 2 195 255 99 157 1.64e-11 66.6
MS.gene059916.t1 MTR_4g013260 50.633 79 38 1 178 256 319 396 4.99e-23 102
MS.gene059916.t1 MTR_4g013260 48.333 60 30 1 196 255 185 243 4.90e-13 71.6
MS.gene059916.t1 MTR_7g071120 52.564 78 36 1 178 255 307 383 7.69e-23 102
MS.gene059916.t1 MTR_7g071120 51.613 62 28 2 196 257 167 226 2.36e-12 69.7
MS.gene059916.t1 MTR_2g105060 59.677 62 25 0 194 255 93 154 2.50e-22 96.3
MS.gene059916.t1 MTR_2g105060 43.478 92 41 1 175 255 138 229 2.76e-22 98.2
MS.gene059916.t1 MTR_7g011820 42.478 113 60 2 162 270 373 484 3.72e-22 100
MS.gene059916.t1 MTR_7g011820 42.222 90 49 3 166 255 200 286 2.12e-12 69.7
MS.gene059916.t1 MTR_3g009470 51.948 77 36 1 179 255 479 554 5.35e-22 100
MS.gene059916.t1 MTR_3g009470 40.000 100 55 4 156 255 244 338 3.57e-13 72.8
MS.gene059916.t1 MTR_5g042920 36.257 171 102 3 118 286 245 410 6.30e-22 98.6
MS.gene059916.t1 MTR_5g042920 50.746 67 30 3 189 255 146 209 9.08e-14 73.9
MS.gene059916.t1 MTR_7g080020 38.406 138 65 3 120 255 433 552 1.38e-21 99.4
MS.gene059916.t1 MTR_7g080020 48.485 66 32 2 193 258 278 341 1.49e-11 67.4
MS.gene059916.t1 MTR_7g100510 46.667 90 46 2 183 271 349 437 1.65e-21 97.4
MS.gene059916.t1 MTR_7g100510 45.679 81 41 3 190 270 185 262 7.69e-14 73.9
MS.gene059916.t1 MTR_4g082580 50.000 80 39 1 180 259 263 341 1.66e-21 97.1
MS.gene059916.t1 MTR_4g082580 34.286 140 79 5 195 332 145 273 3.15e-12 68.6
MS.gene059916.t1 MTR_7g080000 50.000 78 38 1 178 255 415 491 1.98e-21 98.6
MS.gene059916.t1 MTR_7g080000 49.206 63 30 2 193 255 232 292 1.25e-11 67.8
MS.gene059916.t1 MTR_7g109800 39.167 120 60 3 162 273 104 218 8.80e-21 93.2
MS.gene059916.t1 MTR_1g086790 40.000 125 69 4 162 284 128 248 1.04e-20 93.6
MS.gene059916.t1 MTR_5g044695 50.562 89 35 2 135 223 26 105 1.58e-20 87.0
MS.gene059916.t1 MTR_4g130900 46.392 97 48 2 163 256 324 419 2.07e-20 94.7
MS.gene059916.t1 MTR_6g038890 50.562 89 35 2 135 223 137 216 3.53e-20 89.7
MS.gene059916.t1 MTR_8g007270 46.988 83 43 1 171 253 130 211 4.07e-20 89.7
MS.gene059916.t1 MTR_4g094588 42.857 91 51 1 182 272 165 254 6.80e-20 91.3
MS.gene059916.t1 MTR_5g097490 45.882 85 45 1 180 264 237 320 9.32e-20 91.7
MS.gene059916.t1 MTR_3g104750 43.750 80 44 1 173 252 82 160 1.36e-19 86.3
MS.gene059916.t1 MTR_3g095080 47.368 76 39 1 178 253 151 225 2.27e-19 87.8
MS.gene059916.t1 MTR_2g033820 48.052 77 39 1 179 255 187 262 2.70e-19 90.1
MS.gene059916.t1 MTR_3g095080 47.368 76 39 1 178 253 127 201 2.82e-19 87.0
MS.gene059916.t1 MTR_4g122530 47.436 78 40 1 179 256 192 268 4.79e-19 89.7
MS.gene059916.t1 MTR_1g015140 49.315 73 36 1 180 252 87 158 6.85e-19 84.3
MS.gene059916.t1 MTR_7g079010 51.351 74 35 1 179 252 125 197 9.63e-19 85.5
MS.gene059916.t1 MTR_5g016610 55.224 67 28 1 190 256 196 260 1.42e-18 86.3
MS.gene059916.t1 MTR_5g091390 48.649 74 37 1 182 255 144 216 1.66e-18 86.7
MS.gene059916.t1 MTR_4g094908 57.627 59 25 0 196 254 267 325 1.66e-18 87.4
MS.gene059916.t1 MTR_7g028415 48.649 74 35 2 186 259 84 154 3.30e-18 82.8
MS.gene059916.t1 MTR_7g028710 48.649 74 35 2 186 259 84 154 3.30e-18 82.8
MS.gene059916.t1 MTR_8g087000 55.385 65 29 0 195 259 77 141 3.77e-18 84.3
MS.gene059916.t1 MTR_8g087000 55.385 65 29 0 195 259 76 140 3.77e-18 84.3
MS.gene059916.t1 MTR_7g109600 45.263 95 49 1 196 290 54 145 5.71e-18 84.3
MS.gene059916.t1 MTR_8g092140 46.753 77 39 2 178 253 142 217 6.03e-18 83.6
MS.gene059916.t1 MTR_5g043880 42.105 95 53 2 179 272 108 201 8.66e-18 84.0
MS.gene059916.t1 MTR_8g092010 42.857 77 43 1 182 258 95 170 1.01e-17 81.6
MS.gene059916.t1 MTR_2g083870 49.367 79 40 0 186 264 71 149 1.22e-17 83.2
MS.gene059916.t1 MTR_3g095040 46.753 77 40 1 182 258 105 180 2.08e-17 81.3
MS.gene059916.t1 MTR_2g024350 44.330 97 45 2 196 283 9 105 2.62e-17 81.6
MS.gene059916.t1 MTR_1g009613 52.542 59 28 0 196 254 263 321 6.71e-17 82.4
MS.gene059916.t1 MTR_1g070455 53.448 58 27 0 196 253 294 351 6.93e-17 82.8
MS.gene059916.t1 MTR_2g016770 53.333 60 28 0 196 255 36 95 1.54e-16 79.0
MS.gene059916.t1 MTR_2g016770 53.333 60 28 0 196 255 28 87 2.00e-16 78.6
MS.gene059916.t1 MTR_3g108960 48.684 76 35 3 179 252 298 371 4.10e-16 80.9
MS.gene059916.t1 MTR_2g024380 45.455 77 40 1 179 255 237 311 4.93e-16 80.9
MS.gene059916.t1 MTR_2g032030 46.667 75 40 0 196 270 268 342 5.13e-16 80.9
MS.gene059916.t1 MTR_2g032030 46.667 75 40 0 196 270 268 342 1.25e-15 79.3
MS.gene059916.t1 MTR_6g086555 47.368 76 38 2 182 256 193 267 1.37e-15 79.3
MS.gene059916.t1 MTR_7g062220 58.621 58 23 1 195 252 124 180 3.27e-15 77.0
MS.gene059916.t1 MTR_1g099600 36.036 111 66 2 160 265 145 255 5.38e-15 76.3
MS.gene059916.t1 MTR_0117s0040 38.776 98 51 3 157 252 41 131 5.46e-15 75.1
MS.gene059916.t1 MTR_1g077780 44.304 79 43 1 179 257 46 123 6.18e-15 72.4
MS.gene059916.t1 MTR_4g127040 50.000 64 30 1 190 253 242 303 6.23e-15 76.3
MS.gene059916.t1 MTR_8g028565 47.887 71 37 0 195 265 155 225 7.54e-15 76.3
MS.gene059916.t1 MTR_4g007060 52.459 61 27 2 174 232 139 199 1.11e-14 74.3
MS.gene059916.t1 MTR_7g079040 39.560 91 52 1 178 265 134 224 1.22e-14 75.5
MS.gene059916.t1 MTR_8g096730 36.364 99 59 2 165 260 37 134 5.23e-14 70.1
MS.gene059916.t1 MTR_8g098945 42.466 73 42 0 193 265 127 199 5.74e-14 72.8
MS.gene059916.t1 MTR_3g031220 49.206 63 30 2 195 257 198 258 9.25e-14 73.6
MS.gene059916.t1 MTR_8g099350 37.333 150 63 7 115 250 57 189 1.29e-13 72.8
MS.gene059916.t1 MTR_3g009470 40.385 104 49 5 156 255 244 338 2.53e-13 72.8
MS.gene059916.t1 MTR_5g074200 42.308 78 43 2 195 272 220 295 3.18e-13 71.2
MS.gene059916.t1 MTR_1g078260 41.096 73 41 2 182 253 234 305 4.08e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059916.t1 AT5G15130 44.719 445 180 18 25 437 12 422 4.42e-82 265
MS.gene059916.t1 AT5G15130 44.719 445 180 18 25 437 54 464 7.71e-82 265
MS.gene059916.t1 AT1G18860 38.306 496 204 15 25 450 60 523 2.58e-68 229
MS.gene059916.t1 AT1G68150 81.633 98 18 0 179 276 219 316 1.21e-53 186
MS.gene059916.t1 AT4G04450 45.556 270 109 8 170 435 173 408 3.97e-52 183
MS.gene059916.t1 AT4G04450 45.556 270 109 8 170 435 267 502 1.39e-51 184
MS.gene059916.t1 AT1G62300 46.014 276 125 10 170 441 288 543 5.58e-49 177
MS.gene059916.t1 AT1G69810 36.826 334 171 12 5 330 20 321 6.18e-49 174
MS.gene059916.t1 AT1G69810 39.322 295 143 11 40 330 1 263 2.77e-45 162
MS.gene059916.t1 AT4G01720 49.242 264 90 9 175 433 219 443 9.83e-42 156
MS.gene059916.t1 AT4G22070 44.561 285 109 9 170 441 272 520 6.40e-37 144
MS.gene059916.t1 AT4G22070 44.561 285 109 9 170 441 272 520 6.40e-37 144
MS.gene059916.t1 AT4G22070 44.561 285 109 9 170 441 272 520 6.40e-37 144
MS.gene059916.t1 AT4G22070 44.561 285 109 9 170 441 272 520 6.40e-37 144
MS.gene059916.t1 AT4G31800 54.321 81 37 0 193 273 109 189 1.95e-26 108
MS.gene059916.t1 AT4G31800 54.321 81 37 0 193 273 174 254 3.19e-26 109
MS.gene059916.t1 AT2G25000 65.079 63 22 0 193 255 101 163 7.11e-25 103
MS.gene059916.t1 AT2G25000 65.079 63 22 0 193 255 101 163 7.11e-25 103
MS.gene059916.t1 AT2G25000 65.079 63 22 0 193 255 123 185 1.17e-24 103
MS.gene059916.t1 AT2G25000 65.079 63 22 0 193 255 144 206 1.42e-24 103
MS.gene059916.t1 AT1G80840 61.538 65 25 0 191 255 142 206 1.71e-24 104
MS.gene059916.t1 AT2G38470 38.843 121 73 1 147 267 314 433 5.12e-24 105
MS.gene059916.t1 AT2G38470 51.667 60 27 2 196 255 185 242 5.22e-13 71.6
MS.gene059916.t1 AT1G29860 35.593 177 79 5 179 355 120 261 6.49e-24 102
MS.gene059916.t1 AT5G56270 54.545 77 34 1 179 255 471 546 1.61e-23 105
MS.gene059916.t1 AT5G56270 51.667 60 27 2 196 255 274 331 4.19e-12 69.3
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 187 269 5.51e-23 101
MS.gene059916.t1 AT4G26640 37.069 116 60 5 187 291 25 138 4.31e-12 68.2
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 187 269 5.51e-23 101
MS.gene059916.t1 AT4G26640 37.069 116 60 5 187 291 25 138 4.31e-12 68.2
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 187 269 5.51e-23 101
MS.gene059916.t1 AT4G26640 37.069 116 60 5 187 291 25 138 4.31e-12 68.2
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 187 269 5.51e-23 101
MS.gene059916.t1 AT4G26640 37.069 116 60 5 187 291 25 138 4.31e-12 68.2
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 291 373 1.31e-22 101
MS.gene059916.t1 AT4G26640 39.773 88 49 3 187 272 129 214 8.07e-12 67.8
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 323 405 1.41e-22 101
MS.gene059916.t1 AT4G26640 46.479 71 34 3 187 255 161 229 8.35e-12 68.2
MS.gene059916.t1 AT2G03340 41.441 111 64 1 150 260 370 479 1.58e-22 101
MS.gene059916.t1 AT2G03340 50.746 67 30 3 189 255 245 308 2.04e-14 76.3
MS.gene059916.t1 AT4G30935 44.954 109 57 2 148 256 286 391 1.66e-22 100
MS.gene059916.t1 AT4G26640 48.810 84 42 1 177 260 363 445 2.00e-22 101
MS.gene059916.t1 AT4G26640 46.479 71 34 3 187 255 201 269 1.00e-11 67.8
MS.gene059916.t1 AT1G13960 44.792 96 46 2 166 255 374 468 5.37e-22 99.8
MS.gene059916.t1 AT1G13960 49.254 67 31 3 189 255 224 287 3.27e-13 72.4
MS.gene059916.t1 AT1G13960 52.703 74 34 1 182 255 243 315 7.97e-22 97.4
MS.gene059916.t1 AT1G13960 49.254 67 31 3 189 255 71 134 4.41e-13 71.2
MS.gene059916.t1 AT5G07100 51.282 78 37 1 178 255 217 293 1.06e-21 96.3
MS.gene059916.t1 AT5G07100 42.105 76 43 1 193 268 115 189 5.01e-12 67.4
MS.gene059916.t1 AT5G07100 51.282 78 37 1 178 255 124 200 1.07e-21 94.0
MS.gene059916.t1 AT5G07100 42.105 76 43 1 193 268 22 96 3.16e-12 66.6
MS.gene059916.t1 AT5G07100 51.282 78 37 1 178 255 124 200 1.07e-21 94.0
MS.gene059916.t1 AT5G07100 42.105 76 43 1 193 268 22 96 3.16e-12 66.6
MS.gene059916.t1 AT5G07100 51.282 78 37 1 178 255 124 200 1.07e-21 94.0
MS.gene059916.t1 AT5G07100 42.105 76 43 1 193 268 22 96 3.16e-12 66.6
MS.gene059916.t1 AT5G07100 51.282 78 37 1 178 255 124 200 1.07e-21 94.0
MS.gene059916.t1 AT5G07100 42.105 76 43 1 193 268 22 96 3.16e-12 66.6
MS.gene059916.t1 AT5G26170 50.685 73 35 1 181 253 99 170 1.48e-21 92.4
MS.gene059916.t1 AT2G04880 52.000 75 35 1 181 255 269 342 1.53e-21 97.8
MS.gene059916.t1 AT2G04880 41.237 97 52 4 193 289 109 200 5.15e-13 71.6
MS.gene059916.t1 AT5G41570 43.299 97 54 1 156 252 59 154 2.46e-21 92.0
MS.gene059916.t1 AT2G04880 52.000 75 35 1 181 255 293 366 2.49e-21 97.4
MS.gene059916.t1 AT2G04880 45.588 68 35 2 193 260 109 174 9.71e-13 70.9
MS.gene059916.t1 AT4G26440 37.241 145 77 4 178 322 355 485 4.10e-21 97.4
MS.gene059916.t1 AT4G26440 49.254 67 31 3 189 255 173 236 8.06e-12 68.2
MS.gene059916.t1 AT2G30250 44.792 96 49 2 163 255 293 387 4.51e-21 95.9
MS.gene059916.t1 AT2G44745 44.186 86 47 1 167 252 117 201 6.91e-21 91.7
MS.gene059916.t1 AT3G01080 51.351 74 35 1 182 255 331 403 9.04e-21 95.5
MS.gene059916.t1 AT3G01080 51.351 74 35 1 182 255 293 365 1.07e-20 95.1
MS.gene059916.t1 AT2G47260 43.137 102 52 2 175 271 154 254 1.20e-20 93.6
MS.gene059916.t1 AT5G49520 46.835 79 41 1 179 257 205 282 2.24e-20 93.6
MS.gene059916.t1 AT5G46350 46.591 88 45 2 182 268 170 256 4.42e-20 91.7
MS.gene059916.t1 AT4G18170 35.156 128 79 2 163 290 143 266 5.55e-20 91.3
MS.gene059916.t1 AT1G64000 52.113 71 33 1 182 252 101 170 1.64e-19 87.0
MS.gene059916.t1 AT5G28650 62.712 59 22 0 200 258 267 325 2.19e-19 89.7
MS.gene059916.t1 AT5G64810 45.000 80 43 1 173 252 88 166 4.15e-19 85.9
MS.gene059916.t1 AT1G55600 44.872 78 42 1 178 255 290 366 6.50e-19 90.1
MS.gene059916.t1 AT4G24240 52.778 72 32 1 190 261 278 347 7.24e-19 88.6
MS.gene059916.t1 AT3G04670 59.322 59 24 0 200 258 267 325 8.54e-19 88.2
MS.gene059916.t1 AT2G23320 59.322 59 24 0 196 254 241 299 1.61e-18 87.0
MS.gene059916.t1 AT1G69310 39.669 121 65 3 133 252 90 203 2.33e-18 85.9
MS.gene059916.t1 AT1G69310 39.669 121 65 3 133 252 90 203 2.33e-18 85.9
MS.gene059916.t1 AT1G69310 39.669 121 65 3 133 252 90 203 2.33e-18 85.9
MS.gene059916.t1 AT4G39410 40.964 83 48 1 171 253 199 280 3.68e-18 85.9
MS.gene059916.t1 AT2G46130 51.351 74 35 1 179 252 14 86 3.68e-18 80.5
MS.gene059916.t1 AT1G29280 47.297 74 39 0 186 259 65 138 4.51e-18 84.7
MS.gene059916.t1 AT3G62340 48.193 83 42 1 174 256 97 178 6.24e-18 84.7
MS.gene059916.t1 AT2G30590 46.988 83 36 1 178 252 288 370 1.32e-17 85.1
MS.gene059916.t1 AT2G37260 54.412 68 30 1 190 257 262 328 1.74e-17 84.3
MS.gene059916.t1 AT2G37260 44.444 99 52 3 196 294 84 179 5.18e-17 82.8
MS.gene059916.t1 AT2G37260 54.412 68 30 1 190 257 264 330 1.81e-17 84.3
MS.gene059916.t1 AT2G37260 44.444 99 52 3 196 294 86 181 5.19e-17 83.2
MS.gene059916.t1 AT4G31550 35.088 171 81 7 105 252 140 303 2.58e-17 83.6
MS.gene059916.t1 AT2G37260 54.412 68 30 1 190 257 344 410 3.42e-17 84.3
MS.gene059916.t1 AT2G37260 44.444 99 52 3 196 294 166 261 1.07e-16 82.8
MS.gene059916.t1 AT3G01970 47.297 74 38 1 181 254 51 123 4.82e-17 78.6
MS.gene059916.t1 AT4G31550 35.294 170 81 8 105 252 140 302 6.04e-17 82.4
MS.gene059916.t1 AT5G13080 47.368 76 39 1 182 257 54 128 6.19e-17 78.2
MS.gene059916.t1 AT2G24570 39.806 103 51 3 175 277 230 321 2.28e-16 80.9
MS.gene059916.t1 AT4G23550 44.156 77 43 0 194 270 139 215 1.97e-15 77.8
MS.gene059916.t1 AT1G30650 50.794 63 31 0 200 262 222 284 2.14e-15 79.0
MS.gene059916.t1 AT4G01250 46.479 71 38 0 195 265 128 198 3.25e-15 77.0
MS.gene059916.t1 AT3G58710 53.125 64 30 0 195 258 71 134 4.15e-15 76.3
MS.gene059916.t1 AT3G58710 53.125 64 30 0 195 258 70 133 4.62e-15 75.9
MS.gene059916.t1 AT2G34830 49.254 67 34 0 196 262 216 282 5.91e-15 77.4
MS.gene059916.t1 AT2G34830 49.254 67 34 0 196 262 225 291 7.57e-15 77.0
MS.gene059916.t1 AT4G31800 67.500 40 13 0 193 232 174 213 1.38e-14 73.9
MS.gene059916.t1 AT5G52830 48.571 70 36 0 196 265 166 235 2.19e-14 75.1
MS.gene059916.t1 AT2G21900 45.161 62 33 1 194 255 108 168 6.03e-14 71.2
MS.gene059916.t1 AT1G69310 37.190 121 64 4 133 252 90 199 1.95e-13 71.2
MS.gene059916.t1 AT2G46130 47.297 74 34 2 179 252 14 82 2.82e-13 66.6
MS.gene059916.t1 AT5G43290 51.724 58 27 1 195 252 114 170 3.92e-13 70.5
MS.gene059916.t1 AT5G24110 46.575 73 36 2 180 250 99 170 9.61e-13 69.7
MS.gene059916.t1 AT5G45050 35.780 109 68 1 147 255 995 1101 6.20e-12 68.9
MS.gene059916.t1 AT5G45050 35.780 109 68 1 147 255 1134 1240 7.01e-12 68.9
MS.gene059916.t1 AT5G45050 35.780 109 68 1 147 255 1106 1212 7.53e-12 68.9
MS.gene059916.t1 AT3G01080 49.180 61 29 2 195 255 205 263 2.79e-11 65.5
MS.gene059916.t1 AT2G40740 45.333 75 36 2 195 264 173 247 9.14e-11 63.5

Find 103 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACTTCATCATCCTTTAT+TGG 0.121885 8.1:-19369074 None:intergenic
TTCACTGGACTTGGACTATT+TGG 0.150093 8.1:-19369035 None:intergenic
GCAGCACTTTCTTCACTTAA+TGG 0.193251 8.1:+19370533 MS.gene059916:CDS
CAATGCATGGGATTTGATTC+AGG 0.243163 8.1:-19370269 None:intergenic
ATAAATAATCACCAATTAAT+TGG 0.256352 8.1:-19370819 None:intergenic
TCATCAAGTTCTAAAGTAAA+TGG 0.266329 8.1:+19370656 MS.gene059916:CDS
GGAAATGCAATTTAACAATA+TGG 0.281542 8.1:+19368755 MS.gene059916:CDS
ATTCTGCATTTATTTCTTCA+TGG 0.288137 8.1:-19368824 None:intergenic
TTCTGAAGTTGTTCCAATAA+AGG 0.289315 8.1:+19369061 MS.gene059916:CDS
TTGTTCCTATTATTACTATA+TGG 0.291383 8.1:-19370329 None:intergenic
GAAATGGGTTGAGATGTTTC+AGG 0.326007 8.1:+19370613 MS.gene059916:CDS
CAAACCCTAGCTTTCTTTGC+AGG 0.346131 8.1:-19369170 None:intergenic
ATCAACCATATAGTAATAAT+AGG 0.373148 8.1:+19370324 MS.gene059916:CDS
GATGATGTTGAAGAATTTGA+TGG 0.381044 8.1:-19370161 None:intergenic
GCTAAAGCTGATTGAAAAGT+TGG 0.388661 8.1:-19370509 None:intergenic
AATCTAAGCACTTTAAACTT+TGG 0.395690 8.1:+19370356 MS.gene059916:CDS
GTCTTATTGAATGCCTTACT+TGG 0.397648 8.1:-19369110 None:intergenic
CATCCGGTAGATAAAAGTTT+AGG 0.408231 8.1:-19370049 None:intergenic
GGATGCCAATGGAGGAAGTA+TGG 0.408955 8.1:+19369506 MS.gene059916:CDS
TAATGATGAAGAATTCAATA+AGG 0.410747 8.1:+19368944 MS.gene059916:CDS
CCATTCTGTGTATTGTTCAC+TGG 0.411705 8.1:-19370710 None:intergenic
ATTTGAGTCAGAAAATGAAA+TGG 0.412330 8.1:+19370597 MS.gene059916:CDS
CAAACCAACAACAATCTTCA+TGG 0.413700 8.1:+19370026 MS.gene059916:CDS
TTTGTCCATACTTCCTCCAT+TGG 0.414359 8.1:-19369511 None:intergenic
TTTGAGTCAGAAAATGAAAT+GGG 0.416298 8.1:+19370598 MS.gene059916:CDS
GGTTCATCAACCTCCAACTC+TGG 0.424998 8.1:+19369987 MS.gene059916:CDS
GCCGCATCGATGCTATTATC+AGG 0.425843 8.1:+19369966 MS.gene059916:CDS
GGAAGAGTTGTCACTTGGAT+TGG 0.428474 8.1:+19368965 MS.gene059916:CDS
GATCTTGTTTCCCTCAGTCT+TGG 0.450377 8.1:+19368849 MS.gene059916:CDS
TTTGAGTAGTAGCATAATTG+AGG 0.451637 8.1:-19370301 None:intergenic
TTGTTGTTGGTTTGTGCTGA+TGG 0.452268 8.1:-19370017 None:intergenic
GGAGACTTGGCCACCAAGTA+AGG 0.452359 8.1:+19369097 MS.gene059916:CDS
ATGATAGTGCAGGGTTGGAT+AGG 0.467366 8.1:-19370094 None:intergenic
AAACTCCTGCAAAGAAAGCT+AGG 0.468281 8.1:+19369165 MS.gene059916:CDS
GATCTTTCAGTATTAGCAAT+GGG 0.471781 8.1:-19367714 None:intergenic
CGATAGTATGCTCGAGGGCA+AGG 0.473221 8.1:-19369551 None:intergenic
TTGGGCGAAGATATTGTGCT+TGG 0.486362 8.1:-19367750 None:intergenic
GTGAGGTCAAGAGTGATAGT+TGG 0.491969 8.1:-19370131 None:intergenic
AGAGTGGAAGAAGGGTATCT+TGG 0.493398 8.1:-19370233 None:intergenic
TTCTCAAAACAGATGAATGA+TGG 0.497069 8.1:+19369485 MS.gene059916:intron
TAAATTGCATTTCCAGTGCT+CGG 0.498132 8.1:-19368746 None:intergenic
TCAGAACTATTCACTGGACT+TGG 0.498507 8.1:-19369044 None:intergenic
AAATTTGACACATCAAAATC+AGG 0.501966 8.1:+19368993 MS.gene059916:CDS
CTAAAGCTAAGAGTGGAAGA+AGG 0.503500 8.1:-19370242 None:intergenic
TTATTGAATGCCTTACTTGG+TGG 0.504957 8.1:-19369107 None:intergenic
AGTTCTAAAGTAAATGGTTG+TGG 0.510261 8.1:+19370662 MS.gene059916:CDS
TTTACTTTAGAACTTGATGA+AGG 0.512151 8.1:-19370653 None:intergenic
TAGGCCATGAAGATTGTTGT+TGG 0.513416 8.1:-19370030 None:intergenic
CGATGCGGCTGCGGAAGTTG+TGG 0.514002 8.1:-19369952 None:intergenic
TTGAGATGATAGTGCAGGGT+TGG 0.519761 8.1:-19370099 None:intergenic
AATAAGGAAGAGTTGTCACT+TGG 0.522430 8.1:+19368960 MS.gene059916:CDS
CTGAATCAAATCCCATGCAT+TGG 0.522577 8.1:+19370270 MS.gene059916:CDS
GCCATGGCTGTTGCTGAAAG+TGG 0.522889 8.1:-19369927 None:intergenic
AAAAGTGCTTCTGCATCTCC+TGG 0.524615 8.1:+19370776 MS.gene059916:CDS
AATTTGATGGGTTTGAAGTG+AGG 0.528347 8.1:-19370148 None:intergenic
GGTGCAGAAAATGGCAAAGA+AGG 0.529278 8.1:-19370752 None:intergenic
ACAACTTCAGAACTATTCAC+TGG 0.533241 8.1:-19369050 None:intergenic
GCGAATCAAAATCAAAGTGC+AGG 0.538019 8.1:+19370569 MS.gene059916:CDS
TCCACTTTCAGCAACAGCCA+TGG 0.540367 8.1:+19369926 MS.gene059916:CDS
CTTGAGTTGAATCTAACAAA+GGG 0.541322 8.1:-19370185 None:intergenic
TAATAGCATCGATGCGGCTG+CGG 0.547291 8.1:-19369961 None:intergenic
ATGATGAAGTTGTGGAGACT+TGG 0.550945 8.1:+19369084 MS.gene059916:CDS
AATGACTGAATACCGAGCAC+TGG 0.553755 8.1:+19368734 MS.gene059916:CDS
CCAGTGAACAATACACAGAA+TGG 0.554001 8.1:+19370710 MS.gene059916:CDS
ACTGAAAGATCAATTGAGGC+TGG 0.554571 8.1:+19367726 MS.gene059916:CDS
AAATCAGGTAGCACAACTGA+AGG 0.555466 8.1:+19369008 MS.gene059916:CDS
TGATCTTTCAGTATTAGCAA+TGG 0.559239 8.1:-19367715 None:intergenic
AATAAAGGATGATGAAGTTG+TGG 0.561066 8.1:+19369076 MS.gene059916:CDS
GAGGAAGCTATTCCAATGCA+TGG 0.564369 8.1:-19370282 None:intergenic
ATGATGTTGAAGAATTTGAT+GGG 0.574839 8.1:-19370160 None:intergenic
AGGAAGCTATTCCAATGCAT+GGG 0.575316 8.1:-19370281 None:intergenic
AGAAGTATTATTTACCGTTG+GGG 0.579707 8.1:-19369213 None:intergenic
AGGAGAACTAAAGCTAAGAG+TGG 0.580510 8.1:-19370249 None:intergenic
TAAAGCTAAGAGTGGAAGAA+GGG 0.581456 8.1:-19370241 None:intergenic
TGCGGAAGTTGTGGAAGCCA+TGG 0.588791 8.1:-19369943 None:intergenic
TAATACTGAAAGATCAATTG+AGG 0.589489 8.1:+19367722 MS.gene059916:CDS
AACTCCTGCAAAGAAAGCTA+GGG 0.594594 8.1:+19369166 MS.gene059916:CDS
GAATGTTGAGATGATAGTGC+AGG 0.594784 8.1:-19370104 None:intergenic
AGGAACTCTTCCAAGACTGA+GGG 0.598245 8.1:-19368859 None:intergenic
GCTTGAGTTGAATCTAACAA+AGG 0.603483 8.1:-19370186 None:intergenic
TCAGGTACAAAGATGTGTTG+AGG 0.608124 8.1:+19369854 MS.gene059916:intron
TGGCTGTTGCTGAAAGTGGA+AGG 0.613751 8.1:-19369923 None:intergenic
AGGCATTCAATAAGACAATG+AGG 0.620849 8.1:+19369117 MS.gene059916:CDS
TTGCTGAAAGTGGAAGGCTA+TGG 0.623282 8.1:-19369917 None:intergenic
TGGCATTGATCCAGAGTTGG+AGG 0.624131 8.1:-19369997 None:intergenic
TTCTAATCACAACATACGAA+GGG 0.629312 8.1:+19369886 MS.gene059916:CDS
TTCAAGTTTCTTGAACAAGA+CGG 0.630325 8.1:+19370685 MS.gene059916:CDS
TAGGAACTCTTCCAAGACTG+AGG 0.635629 8.1:-19368860 None:intergenic
GGCATTCAATAAGACAATGA+GGG 0.636144 8.1:+19369118 MS.gene059916:CDS
ATTCTAATCACAACATACGA+AGG 0.641504 8.1:+19369885 MS.gene059916:CDS
GTGCAACGATAGTATGCTCG+AGG 0.642506 8.1:-19369557 None:intergenic
AATCAGGTAGCACAACTGAA+GGG 0.644837 8.1:+19369009 MS.gene059916:CDS
AGATGAATGATGGATGCCAA+TGG 0.647635 8.1:+19369495 MS.gene059916:intron
TGATGGCATTGATCCAGAGT+TGG 0.661299 8.1:-19370000 None:intergenic
AGCAAGATGTGACACCCCAA+CGG 0.667652 8.1:+19369199 MS.gene059916:CDS
TGAATGATGGATGCCAATGG+AGG 0.675108 8.1:+19369498 MS.gene059916:CDS
TAAGACAATGAGGGACGCTG+AGG 0.682684 8.1:+19369127 MS.gene059916:CDS
TTGTCACTATTATCACCACC+AGG 0.684962 8.1:-19370794 None:intergenic
ACCTGATAATAGCATCGATG+CGG 0.688754 8.1:-19369967 None:intergenic
TGCAACGATAGTATGCTCGA+GGG 0.694519 8.1:-19369556 None:intergenic
AGTGCTTCTGCATCTCCTGG+TGG 0.699273 8.1:+19370779 MS.gene059916:CDS
TCGAGCATACTATCGTTGCA+CGG 0.699494 8.1:+19369559 MS.gene059916:CDS
AATGTTGAGATGATAGTGCA+GGG 0.717220 8.1:-19370103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr8.1:19368590-19368609 MS.gene059916:intron 0.0%
!! ATATATATATATATATATAT+AGG - chr8.1:19368609-19368590 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr8.1:19368608-19368589 None:intergenic 0.0%
!! AATTGCATATATATATATAT+GGG + chr8.1:19368380-19368399 MS.gene059916:intron 10.0%
!! ATTGAATTATTTAAATTTCT+CGG + chr8.1:19368086-19368105 MS.gene059916:intron 10.0%
!! AATCTAATAAAACTTGATAA+TGG - chr8.1:19367803-19367822 None:intergenic 15.0%
!! CAATTGCATATATATATATA+TGG + chr8.1:19368379-19368398 MS.gene059916:intron 15.0%
!! TTGAATTATTTAAATTTCTC+GGG + chr8.1:19368087-19368106 MS.gene059916:intron 15.0%
!!! AAAATTAACCTTATCATTTT+TGG - chr8.1:19367772-19367791 None:intergenic 15.0%
!!! AAATTAACCTTATCATTTTT+GGG - chr8.1:19367771-19367790 None:intergenic 15.0%
!!! AATTATTTAAATTTTTTGGG+TGG + chr8.1:19368204-19368223 MS.gene059916:intron 15.0%
!!! ATCAAGTTTTATTAGATTAT+TGG + chr8.1:19367805-19367824 MS.gene059916:intron 15.0%
!!! ATTATTTAAATTTTTTGGGT+GGG + chr8.1:19368205-19368224 MS.gene059916:intron 15.0%
!!! TTATTTTAATGTACTTGAAA+AGG - chr8.1:19369348-19369367 None:intergenic 15.0%
!! ATATCAAATTCGATGTTATA+TGG + chr8.1:19369256-19369275 MS.gene059916:intron 20.0%
!! ATCAACCATATAGTAATAAT+AGG + chr8.1:19370324-19370343 MS.gene059916:CDS 20.0%
!! ATCGAATTTGATATAAAATG+AGG - chr8.1:19369250-19369269 None:intergenic 20.0%
!! TAATGATGAAGAATTCAATA+AGG + chr8.1:19368944-19368963 MS.gene059916:CDS 20.0%
!! TCAAAAAAATCAACGATTAT+AGG - chr8.1:19368311-19368330 None:intergenic 20.0%
!! TTGTTCCTATTATTACTATA+TGG - chr8.1:19370332-19370351 None:intergenic 20.0%
!!! AAGTTTTTCTCTTAATCTAA+TGG + chr8.1:19369366-19369385 MS.gene059916:intron 20.0%
!!! AGCTTTAAACAATTTTTCAA+CGG - chr8.1:19368048-19368067 None:intergenic 20.0%
!!! CGTTGATTTTTTTGAATTTT+GGG + chr8.1:19368316-19368335 MS.gene059916:intron 20.0%
!!! GATTTTATACAATTTTGTGT+CGG - chr8.1:19368276-19368295 None:intergenic 20.0%
!!! GCTTTTATACAATTTTATGT+CGG - chr8.1:19368162-19368181 None:intergenic 20.0%
!!! GTTGATTTTTTTGAATTTTG+GGG + chr8.1:19368317-19368336 MS.gene059916:intron 20.0%
!!! TCGTTGATTTTTTTGAATTT+TGG + chr8.1:19368315-19368334 MS.gene059916:intron 20.0%
!!! TCTTCTCTATTTTAATCTAA+CGG - chr8.1:19369299-19369318 None:intergenic 20.0%
!!! TTGATTTTTTTGAATTTTGG+GGG + chr8.1:19368318-19368337 MS.gene059916:intron 20.0%
!!! TTTTCAACGGTTAATTTTAA+TGG - chr8.1:19368035-19368054 None:intergenic 20.0%
!!! TTTTTTGGAATATTGTTACT+AGG - chr8.1:19368882-19368901 None:intergenic 20.0%
! AAATTTGACACATCAAAATC+AGG + chr8.1:19368993-19369012 MS.gene059916:CDS 25.0%
! AATCTAAGCACTTTAAACTT+TGG + chr8.1:19370356-19370375 MS.gene059916:CDS 25.0%
! AATTATTTAAATTTCTCGGG+TGG + chr8.1:19368090-19368109 MS.gene059916:intron 25.0%
! ACCACATAATTATGAATTTC+AGG + chr8.1:19369836-19369855 MS.gene059916:intron 25.0%
! ACCTGAAATTCATAATTATG+TGG - chr8.1:19369840-19369859 None:intergenic 25.0%
! ATGATGTTGAAGAATTTGAT+GGG - chr8.1:19370163-19370182 None:intergenic 25.0%
! ATTATTTAAATTTCTCGGGT+GGG + chr8.1:19368091-19368110 MS.gene059916:intron 25.0%
! ATTTGAGTCAGAAAATGAAA+TGG + chr8.1:19370597-19370616 MS.gene059916:CDS 25.0%
! CTTTGGTATACAAAATACAA+TGG + chr8.1:19370373-19370392 MS.gene059916:intron 25.0%
! GGAAATGCAATTTAACAATA+TGG + chr8.1:19368755-19368774 MS.gene059916:CDS 25.0%
! TAATACTGAAAGATCAATTG+AGG + chr8.1:19367722-19367741 MS.gene059916:CDS 25.0%
! TATGGACAAAAAATTGCAAA+GGG + chr8.1:19369524-19369543 MS.gene059916:CDS 25.0%
! TTTGAGTCAGAAAATGAAAT+GGG + chr8.1:19370598-19370617 MS.gene059916:CDS 25.0%
!! ATTCTGCATTTATTTCTTCA+TGG - chr8.1:19368827-19368846 None:intergenic 25.0%
!!! AAAACAAATAGAAGCACTAA+AGG - chr8.1:19367855-19367874 None:intergenic 25.0%
!!! AATGTTGTTTTTTTGCATGT+AGG - chr8.1:19370414-19370433 None:intergenic 25.0%
!!! ACTTTGTCTTGATCATTTTT+TGG - chr8.1:19368897-19368916 None:intergenic 25.0%
!!! ATATGTACTTGTTTTCTAAC+TGG - chr8.1:19369599-19369618 None:intergenic 25.0%
!!! TACAATTTTATGTCGGTTTT+AGG - chr8.1:19368155-19368174 None:intergenic 25.0%
!!! TATTTTAATCTAACGGTCTA+CGG - chr8.1:19369292-19369311 None:intergenic 25.0%
!!! TCATCAAGTTCTAAAGTAAA+TGG + chr8.1:19370656-19370675 MS.gene059916:CDS 25.0%
!!! TTTACTTTAGAACTTGATGA+AGG - chr8.1:19370656-19370675 None:intergenic 25.0%
!!! TTTGTGTCGGTTTTAAATTT+CGG - chr8.1:19368263-19368282 None:intergenic 25.0%
AATAAAGGATGATGAAGTTG+TGG + chr8.1:19369076-19369095 MS.gene059916:CDS 30.0%
ACAACTTCATCATCCTTTAT+TGG - chr8.1:19369077-19369096 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG - chr8.1:19368476-19368495 None:intergenic 30.0%
AGGTGAGAGAAGAAAATTAA+CGG + chr8.1:19368688-19368707 MS.gene059916:intron 30.0%
ATTCTAATCACAACATACGA+AGG + chr8.1:19369885-19369904 MS.gene059916:CDS 30.0%
GAAATCAAAGTGTGAACAAA+TGG - chr8.1:19369468-19369487 None:intergenic 30.0%
GAGCTAGAAAAAAAAAGCTA+GGG + chr8.1:19368005-19368024 MS.gene059916:intron 30.0%
GATCTTTCAGTATTAGCAAT+GGG - chr8.1:19367717-19367736 None:intergenic 30.0%
GATGATGTTGAAGAATTTGA+TGG - chr8.1:19370164-19370183 None:intergenic 30.0%
GTATGGACAAAAAATTGCAA+AGG + chr8.1:19369523-19369542 MS.gene059916:CDS 30.0%
TAGAAAAAAAAAGCTAGGGT+GGG + chr8.1:19368009-19368028 MS.gene059916:intron 30.0%
TCAAACATTTCACAACATGT+AGG + chr8.1:19370437-19370456 MS.gene059916:intron 30.0%
TCTCTTAATCTAATGGTGTA+GGG + chr8.1:19369373-19369392 MS.gene059916:intron 30.0%
TGATCTTTCAGTATTAGCAA+TGG - chr8.1:19367718-19367737 None:intergenic 30.0%
TTCTAATCACAACATACGAA+GGG + chr8.1:19369886-19369905 MS.gene059916:CDS 30.0%
TTCTCAAAACAGATGAATGA+TGG + chr8.1:19369485-19369504 MS.gene059916:intron 30.0%
TTCTCTTAATCTAATGGTGT+AGG + chr8.1:19369372-19369391 MS.gene059916:intron 30.0%
TTTGAGTAGTAGCATAATTG+AGG - chr8.1:19370304-19370323 None:intergenic 30.0%
! GATATATGTGTGCATTTTCT+AGG - chr8.1:19369750-19369769 None:intergenic 30.0%
! TTCAAGTTTCTTGAACAAGA+CGG + chr8.1:19370685-19370704 MS.gene059916:CDS 30.0%
!! ACACCAACTTACTTTTATGA+AGG + chr8.1:19368470-19368489 MS.gene059916:intron 30.0%
!! AGAAGTATTATTTACCGTTG+GGG - chr8.1:19369216-19369235 None:intergenic 30.0%
!! AGAGAAGTATTATTTACCGT+TGG - chr8.1:19369218-19369237 None:intergenic 30.0%
!! AGTTCTAAAGTAAATGGTTG+TGG + chr8.1:19370662-19370681 MS.gene059916:CDS 30.0%
!! CTTGAGTTGAATCTAACAAA+GGG - chr8.1:19370188-19370207 None:intergenic 30.0%
!! GAGAAGTATTATTTACCGTT+GGG - chr8.1:19369217-19369236 None:intergenic 30.0%
!! TGATTTGATTTTGAACCATC+CGG - chr8.1:19370068-19370087 None:intergenic 30.0%
!! TTCTGAAGTTGTTCCAATAA+AGG + chr8.1:19369061-19369080 MS.gene059916:CDS 30.0%
!!! ATTTTTTTGAATTTTGGGGG+TGG + chr8.1:19368321-19368340 MS.gene059916:intron 30.0%
!!! TGTTTTTTTGCATGTAGGTT+TGG - chr8.1:19370409-19370428 None:intergenic 30.0%
!!! TTTATGTCGGTTTTAGGTTT+CGG - chr8.1:19368149-19368168 None:intergenic 30.0%
!!! TTTTTTTGAATTTTGGGGGT+GGG + chr8.1:19368322-19368341 MS.gene059916:intron 30.0%
AAAGTGAAAATCACACCTTG+AGG + chr8.1:19368518-19368537 MS.gene059916:intron 35.0%
AATAAGGAAGAGTTGTCACT+TGG + chr8.1:19368960-19368979 MS.gene059916:CDS 35.0%
ACAACTTCAGAACTATTCAC+TGG - chr8.1:19369053-19369072 None:intergenic 35.0%
ACATGAGTACTCATTGGAAT+TGG - chr8.1:19367964-19367983 None:intergenic 35.0%
AGGCATTCAATAAGACAATG+AGG + chr8.1:19369117-19369136 MS.gene059916:CDS 35.0%
ATATATGCAATTGCAACCAG+TGG - chr8.1:19368372-19368391 None:intergenic 35.0%
ATCTTCGCCCAAAAATGATA+AGG + chr8.1:19367761-19367780 MS.gene059916:CDS 35.0%
CAAACCAACAACAATCTTCA+TGG + chr8.1:19370026-19370045 MS.gene059916:CDS 35.0%
CATCCGGTAGATAAAAGTTT+AGG - chr8.1:19370052-19370071 None:intergenic 35.0%
CCTCAAGCACAAAATATGAT+TGG - chr8.1:19369772-19369791 None:intergenic 35.0%
CTAAAAGACACCTTCACAAA+AGG - chr8.1:19368421-19368440 None:intergenic 35.0%
CTAGAAAAAAAAAGCTAGGG+TGG + chr8.1:19368008-19368027 MS.gene059916:intron 35.0%
GAGACAACAAAAGCTCAAAT+GGG + chr8.1:19368663-19368682 MS.gene059916:intron 35.0%
GCTAAAGCTGATTGAAAAGT+TGG - chr8.1:19370512-19370531 None:intergenic 35.0%
GGAGCTAGAAAAAAAAAGCT+AGG + chr8.1:19368004-19368023 MS.gene059916:intron 35.0%
GGCATTCAATAAGACAATGA+GGG + chr8.1:19369118-19369137 MS.gene059916:CDS 35.0%
TAAAGCTAAGAGTGGAAGAA+GGG - chr8.1:19370244-19370263 None:intergenic 35.0%
TAAATTGCATTTCCAGTGCT+CGG - chr8.1:19368749-19368768 None:intergenic 35.0%
TGAGACAACAAAAGCTCAAA+TGG + chr8.1:19368662-19368681 MS.gene059916:intron 35.0%
TTATTGAATGCCTTACTTGG+TGG - chr8.1:19369110-19369129 None:intergenic 35.0%
! AATGTTGAGATGATAGTGCA+GGG - chr8.1:19370106-19370125 None:intergenic 35.0%
! CCAATCATATTTTGTGCTTG+AGG + chr8.1:19369769-19369788 MS.gene059916:intron 35.0%
! CTAAACTTTTATCTACCGGA+TGG + chr8.1:19370050-19370069 MS.gene059916:CDS 35.0%
! GTCTTATTGAATGCCTTACT+TGG - chr8.1:19369113-19369132 None:intergenic 35.0%
! TGGCCTAAACTTTTATCTAC+CGG + chr8.1:19370046-19370065 MS.gene059916:CDS 35.0%
! TGTTTTCTAACTGGACATGA+TGG - chr8.1:19369590-19369609 None:intergenic 35.0%
!! AATTTGATGGGTTTGAAGTG+AGG - chr8.1:19370151-19370170 None:intergenic 35.0%
!! CAAATAGAAGCACTAAAGGT+CGG - chr8.1:19367851-19367870 None:intergenic 35.0%
!! GCTTGAGTTGAATCTAACAA+AGG - chr8.1:19370189-19370208 None:intergenic 35.0%
AAACTCCTGCAAAGAAAGCT+AGG + chr8.1:19369165-19369184 MS.gene059916:CDS 40.0%
AAATCAGGTAGCACAACTGA+AGG + chr8.1:19369008-19369027 MS.gene059916:CDS 40.0%
AACAAAAGCTCAAATGGGTG+AGG + chr8.1:19368668-19368687 MS.gene059916:intron 40.0%
AACTCCTGCAAAGAAAGCTA+GGG + chr8.1:19369166-19369185 MS.gene059916:CDS 40.0%
AATCAGGTAGCACAACTGAA+GGG + chr8.1:19369009-19369028 MS.gene059916:CDS 40.0%
ACTGAAAGATCAATTGAGGC+TGG + chr8.1:19367726-19367745 MS.gene059916:CDS 40.0%
AGGAAGCTATTCCAATGCAT+GGG - chr8.1:19370284-19370303 None:intergenic 40.0%
AGGAGAACTAAAGCTAAGAG+TGG - chr8.1:19370252-19370271 None:intergenic 40.0%
ATGATGAAGTTGTGGAGACT+TGG + chr8.1:19369084-19369103 MS.gene059916:CDS 40.0%
ATGTCACATGTTGCAATCAG+TGG + chr8.1:19367980-19367999 MS.gene059916:intron 40.0%
CAATGCATGGGATTTGATTC+AGG - chr8.1:19370272-19370291 None:intergenic 40.0%
CATGTGACATGAGTACTCAT+TGG - chr8.1:19367970-19367989 None:intergenic 40.0%
CCAGTGAACAATACACAGAA+TGG + chr8.1:19370710-19370729 MS.gene059916:CDS 40.0%
CCATTCTGTGTATTGTTCAC+TGG - chr8.1:19370713-19370732 None:intergenic 40.0%
CTAAAGCTAAGAGTGGAAGA+AGG - chr8.1:19370245-19370264 None:intergenic 40.0%
CTGAATCAAATCCCATGCAT+TGG + chr8.1:19370270-19370289 MS.gene059916:CDS 40.0%
GCAGCACTTTCTTCACTTAA+TGG + chr8.1:19370533-19370552 MS.gene059916:CDS 40.0%
GCGAATCAAAATCAAAGTGC+AGG + chr8.1:19370569-19370588 MS.gene059916:CDS 40.0%
TACATCACTTTGCGGGAATT+TGG + chr8.1:19368118-19368137 MS.gene059916:intron 40.0%
TAGGCCATGAAGATTGTTGT+TGG - chr8.1:19370033-19370052 None:intergenic 40.0%
TCAGAACTATTCACTGGACT+TGG - chr8.1:19369047-19369066 None:intergenic 40.0%
TCAGGTACAAAGATGTGTTG+AGG + chr8.1:19369854-19369873 MS.gene059916:intron 40.0%
TGCTAAAAGACACCACCAAA+GGG + chr8.1:19368548-19368567 MS.gene059916:intron 40.0%
TTCACTGGACTTGGACTATT+TGG - chr8.1:19369038-19369057 None:intergenic 40.0%
TTGCTAAAAGACACCACCAA+AGG + chr8.1:19368547-19368566 MS.gene059916:intron 40.0%
TTGTCACTATTATCACCACC+AGG - chr8.1:19370797-19370816 None:intergenic 40.0%
TTTGTCCATACTTCCTCCAT+TGG - chr8.1:19369514-19369533 None:intergenic 40.0%
! CTACAAGACACCTTTTGTGA+AGG + chr8.1:19368408-19368427 MS.gene059916:intron 40.0%
! GAATGTTGAGATGATAGTGC+AGG - chr8.1:19370107-19370126 None:intergenic 40.0%
! TTTTAGCAAGTCACACCTCA+AGG - chr8.1:19368536-19368555 None:intergenic 40.0%
!! ACCTGATAATAGCATCGATG+CGG - chr8.1:19369970-19369989 None:intergenic 40.0%
!! AGATGAATGATGGATGCCAA+TGG + chr8.1:19369495-19369514 MS.gene059916:intron 40.0%
!! GAAATGGGTTGAGATGTTTC+AGG + chr8.1:19370613-19370632 MS.gene059916:CDS 40.0%
!! GCACTTTTAGGTGCAGAAAA+TGG - chr8.1:19370764-19370783 None:intergenic 40.0%
!! TTGTTGTTGGTTTGTGCTGA+TGG - chr8.1:19370020-19370039 None:intergenic 40.0%
AATGACTGAATACCGAGCAC+TGG + chr8.1:19368734-19368753 MS.gene059916:CDS 45.0%
AGGAACTCTTCCAAGACTGA+GGG - chr8.1:19368862-19368881 None:intergenic 45.0%
ATTCCCGCAAAGTGATGTAG+TGG - chr8.1:19368117-19368136 None:intergenic 45.0%
GAGGAAGCTATTCCAATGCA+TGG - chr8.1:19370285-19370304 None:intergenic 45.0%
GGTGCAGAAAATGGCAAAGA+AGG - chr8.1:19370755-19370774 None:intergenic 45.0%
GTGAGGTCAAGAGTGATAGT+TGG - chr8.1:19370134-19370153 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG + chr8.1:19368551-19368570 MS.gene059916:intron 45.0%
TAGGAACTCTTCCAAGACTG+AGG - chr8.1:19368863-19368882 None:intergenic 45.0%
TATGCAATTGCAACCAGTGG+CGG - chr8.1:19368369-19368388 None:intergenic 45.0%
TCACATGTTGCAATCAGTGG+CGG + chr8.1:19367983-19368002 MS.gene059916:intron 45.0%
TCGAGCATACTATCGTTGCA+CGG + chr8.1:19369559-19369578 MS.gene059916:CDS 45.0%
TGCAACGATAGTATGCTCGA+GGG - chr8.1:19369559-19369578 None:intergenic 45.0%
TTGCTGAAAGTGGAAGGCTA+TGG - chr8.1:19369920-19369939 None:intergenic 45.0%
TTGGGCGAAGATATTGTGCT+TGG - chr8.1:19367753-19367772 None:intergenic 45.0%
! ATGATAGTGCAGGGTTGGAT+AGG - chr8.1:19370097-19370116 None:intergenic 45.0%
! CAAACCCTAGCTTTCTTTGC+AGG - chr8.1:19369173-19369192 None:intergenic 45.0%
! GATCTTGTTTCCCTCAGTCT+TGG + chr8.1:19368849-19368868 MS.gene059916:CDS 45.0%
! GGAAGAGTTGTCACTTGGAT+TGG + chr8.1:19368965-19368984 MS.gene059916:CDS 45.0%
! TTGAGATGATAGTGCAGGGT+TGG - chr8.1:19370102-19370121 None:intergenic 45.0%
! TTTTGCTACAAGCCACCCTT+TGG - chr8.1:19368566-19368585 None:intergenic 45.0%
!! AAAAGTGCTTCTGCATCTCC+TGG + chr8.1:19370776-19370795 MS.gene059916:CDS 45.0%
!! AGAGTGGAAGAAGGGTATCT+TGG - chr8.1:19370236-19370255 None:intergenic 45.0%
!! TGAATGATGGATGCCAATGG+AGG + chr8.1:19369498-19369517 MS.gene059916:CDS 45.0%
!! TGATGGCATTGATCCAGAGT+TGG - chr8.1:19370003-19370022 None:intergenic 45.0%
!!! GGAGATGCAGAAGCACTTTT+AGG - chr8.1:19370776-19370795 None:intergenic 45.0%
!! AATTTAAATAATTCAATTAT+AGG - chr8.1:19368083-19368102 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+TGG + chr8.1:19368200-19368219 MS.gene059916:intron 5.0%
!!! TTGAATTATTTAAATTTTTT+GGG + chr8.1:19368201-19368220 MS.gene059916:intron 5.0%
AGCAAGATGTGACACCCCAA+CGG + chr8.1:19369199-19369218 MS.gene059916:CDS 50.0%
GGATGCCAATGGAGGAAGTA+TGG + chr8.1:19369506-19369525 MS.gene059916:CDS 50.0%
GGTTCATCAACCTCCAACTC+TGG + chr8.1:19369987-19370006 MS.gene059916:CDS 50.0%
GTGCAACGATAGTATGCTCG+AGG - chr8.1:19369560-19369579 None:intergenic 50.0%
TAAGACAATGAGGGACGCTG+AGG + chr8.1:19369127-19369146 MS.gene059916:CDS 50.0%
TCCACTTTCAGCAACAGCCA+TGG + chr8.1:19369926-19369945 MS.gene059916:CDS 50.0%
TGGCTGTTGCTGAAAGTGGA+AGG - chr8.1:19369926-19369945 None:intergenic 50.0%
TGGGCCACTACATCACTTTG+CGG + chr8.1:19368110-19368129 MS.gene059916:intron 50.0%
! GCCGCATCGATGCTATTATC+AGG + chr8.1:19369966-19369985 MS.gene059916:CDS 50.0%
!! TAATAGCATCGATGCGGCTG+CGG - chr8.1:19369964-19369983 None:intergenic 50.0%
!! TGGCATTGATCCAGAGTTGG+AGG - chr8.1:19370000-19370019 None:intergenic 50.0%
AGTGCTTCTGCATCTCCTGG+TGG + chr8.1:19370779-19370798 MS.gene059916:CDS 55.0%
CGATAGTATGCTCGAGGGCA+AGG - chr8.1:19369554-19369573 None:intergenic 55.0%
GCCATGGCTGTTGCTGAAAG+TGG - chr8.1:19369930-19369949 None:intergenic 55.0%
GGAGACTTGGCCACCAAGTA+AGG + chr8.1:19369097-19369116 MS.gene059916:CDS 55.0%
GGGCCACTACATCACTTTGC+GGG + chr8.1:19368111-19368130 MS.gene059916:intron 55.0%
TGCGGAAGTTGTGGAAGCCA+TGG - chr8.1:19369946-19369965 None:intergenic 55.0%
TGCTACAAGCCACCCTTTGG+TGG - chr8.1:19368563-19368582 None:intergenic 55.0%
TGGGCACCTCAGCCCATGAA+GGG + chr8.1:19368341-19368360 MS.gene059916:intron 60.0%
CGATGCGGCTGCGGAAGTTG+TGG - chr8.1:19369955-19369974 None:intergenic 65.0%
GTGGGCACCTCAGCCCATGA+AGG + chr8.1:19368340-19368359 MS.gene059916:intron 65.0%
! ACCAGTGGCGGAGCCCTTCA+TGG - chr8.1:19368357-19368376 None:intergenic 65.0%
! CCAGTGGCGGAGCCCTTCAT+GGG - chr8.1:19368356-19368375 None:intergenic 65.0%
CCCATGAAGGGCTCCGCCAC+TGG + chr8.1:19368353-19368372 MS.gene059916:intron 70.0%
! GCGGAGCCCTTCATGGGCTG+AGG - chr8.1:19368350-19368369 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 19367708 19370826 19367708 ID=MS.gene059916
chr8.1 mRNA 19367708 19370826 19367708 ID=MS.gene059916.t1;Parent=MS.gene059916
chr8.1 exon 19367708 19367782 19367708 ID=MS.gene059916.t1.exon1;Parent=MS.gene059916.t1
chr8.1 CDS 19367708 19367782 19367708 ID=cds.MS.gene059916.t1;Parent=MS.gene059916.t1
chr8.1 exon 19368717 19369220 19368717 ID=MS.gene059916.t1.exon2;Parent=MS.gene059916.t1
chr8.1 CDS 19368717 19369220 19368717 ID=cds.MS.gene059916.t1;Parent=MS.gene059916.t1
chr8.1 exon 19369497 19369610 19369497 ID=MS.gene059916.t1.exon3;Parent=MS.gene059916.t1
chr8.1 CDS 19369497 19369610 19369497 ID=cds.MS.gene059916.t1;Parent=MS.gene059916.t1
chr8.1 exon 19369858 19370377 19369858 ID=MS.gene059916.t1.exon4;Parent=MS.gene059916.t1
chr8.1 CDS 19369858 19370377 19369858 ID=cds.MS.gene059916.t1;Parent=MS.gene059916.t1
chr8.1 exon 19370459 19370826 19370459 ID=MS.gene059916.t1.exon5;Parent=MS.gene059916.t1
chr8.1 CDS 19370459 19370826 19370459 ID=cds.MS.gene059916.t1;Parent=MS.gene059916.t1
Gene Sequence

>MS.gene059916

GAAGAACCCATTGCTAATACTGAAAGATCAATTGAGGCTGGTCCAAGCACAATATCTTCGCCCAAAAATGATAAGGTTAATTTTATATAACACCATTATCAAGTTTTATTAGATTATTGGTGTGAACGTAGTTGAGATGACCGACCTTTAGTGCTTCTATTTGTTTTTCGATTAAAAAAATATTGAGTTTAATTTTATACAGTTGCGATATAAAAAATATTTTATATACGAGTCACATTAAAAACAAATTATACCAATTCCAATGAGTACTCATGTCACATGTTGCAATCAGTGGCGGAGCTAGAAAAAAAAAGCTAGGGTGGGCCATTAAAATTAACCGTTGAAAAATTGTTTAAAGCTTCGCAAAATTGACCTATAATTGAATTATTTAAATTTCTCGGGTGGGCCACTACATCACTTTGCGGGAATTTGGATCAACCGAAACCTAAAACCGACATAAAATTGTATAAAAGCTCGCAAAATAGACCTATAATTGAATTATTTAAATTTTTTGGGTGGGCCACTACATCACTTTGCGGGAATTTGGATCAACCGAAATTTAAAACCGACACAAAATTGTATAAAATCTCGTAAAATAGACCTATAATCGTTGATTTTTTTGAATTTTGGGGGTGGGCACCTCAGCCCATGAAGGGCTCCGCCACTGGTTGCAATTGCATATATATATATATGGGTTTTGCTACAAGACACCTTTTGTGAAGGTGTCTTTTAGCAAGTTACTCTATGAGCATTTGCGAAAAGACACCAACTTACTTTTATGAAGGTGTCTTTTAGCAAAGTTATAACTAAAAAGTGAAAATCACACCTTGAGGTGTGACTTGCTAAAAGACACCACCAAAGGGTGGCTTGTAGCAAAACCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGTTGATGATCAGCTTGAGACAACAAAAGCTCAAATGGGTGAGGTGAGAGAAGAAAATTAACGGCTAAAGATGTGCTTGAACAAAATAATGACTGAATACCGAGCACTGGAAATGCAATTTAACAATATGGTTAAGCAAGAAACAAAAAAGAATAATGTTGATCACAATGATAATAACCATGAAGAAATAAATGCAGAATCAGATCTTGTTTCCCTCAGTCTTGGAAGAGTTCCTAGTAACAATATTCCAAAAAATGATCAAGACAAAGTTAACAAAGTGTCTAAACTAGCATTGAATAATGATGAAGAATTCAATAAGGAAGAGTTGTCACTTGGATTGGAGTGTAAATTTGACACATCAAAATCAGGTAGCACAACTGAAGGGTTACCAAATAGTCCAAGTCCAGTGAATAGTTCTGAAGTTGTTCCAATAAAGGATGATGAAGTTGTGGAGACTTGGCCACCAAGTAAGGCATTCAATAAGACAATGAGGGACGCTGAGGATGAAGTTGCTCAACAAACTCCTGCAAAGAAAGCTAGGGTTTGTGTTAGAGCAAGATGTGACACCCCAACGGTAAATAATACTTCTCTATCTCGTCACCTCATTTTATATCAAATTCGATGTTATATGGTGCAGTTTGACCGTAGACCGTTAGATTAAAATAGAGAAGATGTGCGTTAAGATATTATTTACAATACCTTTTCAAGTACATTAAAATAAGTTTTTCTCTTAATCTAATGGTGTAGGGTAAACTGTACTAATTACTAATTTTTTAACTTCAACACACAAGTGTAGTACTTACTAAAAATAATGAAAACCATTTGTTCACACTTTGATTTCTCAAAACAGATGAATGATGGATGCCAATGGAGGAAGTATGGACAAAAAATTGCAAAGGGAAATCCTTGCCCTCGAGCATACTATCGTTGCACGGTTGCACCATCATGTCCAGTTAGAAAACAAGTACATATATATTTACATTACGCTCATGTTTTCATTGAGTTTCAACTGATAATGATCATTTACACGAGATATAATCTAAACTATTCTTCGTCAAAAAAGAAGAAAAAATTATTCTAAACTATTCATCTATTTAGCACCTAGAAAATGCACACATATATCCAATCATATTTTGTGCTTGAGGCTACAATGACATTTAATTAAACTATTTTCACGTATCTAAAATGCACCACATAATTATGAATTTCAGGTACAAAGATGTGTTGAGGACATGTCTATTCTAATCACAACATACGAAGGGACACACAACCATAGCCTTCCACTTTCAGCAACAGCCATGGCTTCCACAACTTCCGCAGCCGCATCGATGCTATTATCAGGTTCATCAACCTCCAACTCTGGATCAATGCCATCAGCACAAACCAACAACAATCTTCATGGCCTAAACTTTTATCTACCGGATGGTTCAAAATCAAATCAATTATACCTATCCAACCCTGCACTATCATCTCAACATTCACATCCAACTATCACTCTTGACCTCACTTCAAACCCATCAAATTCTTCAACATCATCACCCTTTGTTAGATTCAACTCAAGCTACAATAACAACAATAATCAATTACCAAGATACCCTTCTTCCACTCTTAGCTTTAGTTCTCCTGAATCAAATCCCATGCATTGGAATAGCTTCCTCAATTATGCTACTACTCAAAATCAACCATATAGTAATAATAGGAACAATAATAATCTAAGCACTTTAAACTTTGGTATACAAAATACAATGGAAAGTATATACCAAACCTACATGCAAAAAAACAACATTAGTTCAAACATTTCACAACATGTAGGTTTACAAGATAGTACTATATCTGCAGCAACAAAAGCTATCACAGCAGATCCAACTTTTCAATCAGCTTTAGCTGCAGCACTTTCTTCACTTAATGGAAACACTAATCAAGCGAATCAAAATCAAAGTGCAGGAGAAAATTTGAGTCAGAAAATGAAATGGGTTGAGATGTTTCAGGTTTCTTCTACTTCATTGCCTTCATCAAGTTCTAAAGTAAATGGTTGTGGTTCAAGTTTCTTGAACAAGACGGCACCAGTGAACAATACACAGAATGGAAGTTTGATGTTGCTGTCTCCTTCTTTGCCATTTTCTGCACCTAAAAGTGCTTCTGCATCTCCTGGTGGTGATAATAGTGACAATACCAATTAA

Protein sequence

>MS.gene059916.t1

EEPIANTERSIEAGPSTISSPKNDKMCLNKIMTEYRALEMQFNNMVKQETKKNNVDHNDNNHEEINAESDLVSLSLGRVPSNNIPKNDQDKVNKVSKLALNNDEEFNKEELSLGLECKFDTSKSGSTTEGLPNSPSPVNSSEVVPIKDDEVVETWPPSKAFNKTMRDAEDEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSNSGSMPSAQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNNNQLPRYPSSTLSFSSPESNPMHWNSFLNYATTQNQPYSNNRNNNNLSTLNFGLQDSTISAATKAITADPTFQSALAAALSSLNGNTNQANQNQSAGENLSQKMKWVEMFQVSSTSLPSSSSKVNGCGSSFLNKTAPVNNTQNGSLMLLSPSLPFSAPKSASASPGGDNSDNTN