AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94275

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94275.t1 MTR_3g009190 95.016 321 16 0 1 321 17 337 0.0 617
MS.gene94275.t1 MTR_3g009190 95.597 318 14 0 4 321 2 319 0.0 615
MS.gene94275.t1 MTR_6g453040 93.939 297 18 0 25 321 1 297 0.0 569
MS.gene94275.t1 MTR_3g091070 88.552 297 16 1 25 321 1 279 0.0 532
MS.gene94275.t1 MTR_6g453040 89.437 284 26 1 4 287 2 281 0.0 508
MS.gene94275.t1 MTR_3g009190 93.359 256 17 0 66 321 63 318 6.94e-171 479
MS.gene94275.t1 MTR_6g453040 93.361 241 16 0 4 244 2 242 1.18e-163 456
MS.gene94275.t1 MTR_3g009200 79.775 178 24 3 104 278 2 170 3.25e-95 280
MS.gene94275.t1 MTR_6g453030 88.312 77 9 0 94 170 1 77 1.90e-42 141
MS.gene94275.t1 MTR_3g077410 31.579 266 163 8 59 320 32 282 3.55e-26 106
MS.gene94275.t1 MTR_8g099995 31.381 239 147 6 67 300 38 264 8.04e-26 105
MS.gene94275.t1 MTR_4g105310 29.918 244 152 6 62 300 46 275 5.33e-24 100
MS.gene94275.t1 MTR_4g105310 31.140 228 138 7 61 283 45 258 2.36e-23 97.4
MS.gene94275.t1 MTR_7g099850 30.769 221 137 5 67 283 37 245 6.00e-22 94.7
MS.gene94275.t1 MTR_8g098415 31.727 249 150 6 67 308 32 267 3.18e-21 92.4
MS.gene94275.t1 MTR_8g098415 32.129 249 149 6 67 308 32 267 3.98e-21 92.0
MS.gene94275.t1 MTR_1g068970 29.614 233 147 6 67 295 37 256 4.87e-20 89.4
MS.gene94275.t1 MTR_1g100305 30.588 255 145 9 67 308 32 267 5.03e-19 86.3
MS.gene94275.t1 MTR_6g041980 29.648 199 125 6 15 207 14 203 1.07e-18 84.7
MS.gene94275.t1 MTR_1g100395 28.916 249 157 6 67 308 32 267 1.11e-18 85.5
MS.gene94275.t1 MTR_6g041980 29.648 199 125 6 15 207 14 203 6.02e-18 83.6
MS.gene94275.t1 MTR_1g100335 30.493 223 138 5 67 285 32 241 1.22e-17 81.6
MS.gene94275.t1 MTR_1g100335 30.493 223 138 5 67 285 32 241 1.25e-17 81.6
MS.gene94275.t1 MTR_1g100335 28.514 249 158 6 67 308 32 267 2.04e-17 81.6
MS.gene94275.t1 MTR_1g100315 29.778 225 141 5 67 287 32 243 2.08e-17 81.6
MS.gene94275.t1 MTR_6g053550 30.802 237 130 9 66 289 39 254 1.79e-16 79.3
MS.gene94275.t1 MTR_6g081020 29.924 264 155 11 38 289 34 279 2.27e-16 79.3
MS.gene94275.t1 MTR_8g098415 31.343 201 118 6 115 308 23 210 5.69e-16 76.6
MS.gene94275.t1 MTR_8g098415 32.143 196 118 4 67 258 32 216 1.05e-15 75.5
MS.gene94275.t1 MTR_6g053600 29.644 253 139 10 67 301 26 257 3.47e-15 75.1
MS.gene94275.t1 MTR_1g068970 28.421 190 119 6 112 297 15 191 1.40e-13 70.1
MS.gene94275.t1 MTR_2g079710 30.000 240 140 7 64 284 86 316 2.26e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94275.t1 AT5G04070 56.190 315 138 0 7 321 1 315 1.42e-115 338
MS.gene94275.t1 AT5G15940 54.259 317 144 1 6 321 1 317 2.03e-110 323
MS.gene94275.t1 AT5G15940 54.259 317 144 1 6 321 1 317 1.82e-109 323
MS.gene94275.t1 AT5G15940 54.259 317 144 1 6 321 1 317 1.82e-109 323
MS.gene94275.t1 AT5G15940 54.430 316 143 1 7 321 1 316 5.76e-109 322
MS.gene94275.t1 AT2G37540 34.211 228 133 6 67 290 36 250 2.48e-26 105
MS.gene94275.t1 AT2G37540 34.389 221 128 6 67 283 36 243 1.03e-25 105
MS.gene94275.t1 AT4G24050 30.962 239 148 5 67 300 37 263 1.28e-24 100
MS.gene94275.t1 AT4G24050 30.962 239 148 5 67 300 37 263 3.60e-24 100
MS.gene94275.t1 AT4G23430 32.000 250 149 6 67 308 32 268 1.06e-23 99.4
MS.gene94275.t1 AT1G64590 29.536 237 152 4 68 300 38 263 2.73e-23 98.6
MS.gene94275.t1 AT4G23430 31.600 250 148 6 67 308 32 266 8.13e-23 97.1
MS.gene94275.t1 AT5G50130 29.864 221 139 5 67 283 39 247 3.69e-22 94.0
MS.gene94275.t1 AT5G50130 28.692 237 153 5 68 300 40 264 6.00e-22 94.7
MS.gene94275.t1 AT5G50130 30.317 221 137 6 67 283 39 246 7.22e-22 93.2
MS.gene94275.t1 AT5G50130 28.692 237 153 5 68 300 40 264 7.42e-22 94.7
MS.gene94275.t1 AT5G50130 29.114 237 151 6 68 300 40 263 1.22e-21 94.0
MS.gene94275.t1 AT5G50130 29.680 219 138 5 69 283 8 214 1.99e-21 92.8
MS.gene94275.t1 AT4G23420 31.390 223 128 7 67 281 32 237 2.21e-21 92.0
MS.gene94275.t1 AT5G50130 28.390 236 153 5 69 300 8 231 2.53e-21 92.8
MS.gene94275.t1 AT4G09750 29.231 260 148 9 67 320 46 275 3.74e-21 92.4
MS.gene94275.t1 AT4G23420 31.390 223 128 7 67 281 32 237 3.81e-21 91.3
MS.gene94275.t1 AT5G50130 30.137 219 136 6 69 283 8 213 4.63e-21 91.7
MS.gene94275.t1 AT5G50130 28.814 236 151 6 69 300 8 230 5.01e-21 91.7
MS.gene94275.t1 AT4G23420 31.390 223 128 7 67 281 32 237 7.05e-21 91.7
MS.gene94275.t1 AT4G23420 31.390 223 128 7 67 281 32 237 7.05e-21 91.7
MS.gene94275.t1 AT4G23420 31.390 223 128 7 67 281 49 254 7.26e-21 91.7
MS.gene94275.t1 AT5G02540 32.301 226 136 6 74 295 43 255 1.96e-19 87.8
MS.gene94275.t1 AT4G11410 30.769 221 136 5 67 283 32 239 1.10e-18 84.3
MS.gene94275.t1 AT4G11410 30.631 222 137 5 66 283 31 239 5.12e-18 83.6
MS.gene94275.t1 AT4G23430 29.675 246 150 6 67 308 32 258 1.19e-17 82.4
MS.gene94275.t1 AT4G23430 29.268 246 149 6 67 308 32 256 1.09e-16 79.7
MS.gene94275.t1 AT5G53090 31.518 257 149 11 37 286 33 269 8.03e-16 77.8
MS.gene94275.t1 AT4G27760 30.859 256 149 13 40 285 32 269 2.00e-15 76.6
MS.gene94275.t1 AT5G53100 32.189 233 133 9 63 286 43 259 2.77e-14 73.2
MS.gene94275.t1 AT5G54190 29.439 214 125 6 64 258 92 298 3.06e-14 73.2
MS.gene94275.t1 AT5G61830 26.210 248 137 6 66 279 38 273 4.55e-14 72.0
MS.gene94275.t1 AT5G61830 26.210 248 137 6 66 279 38 273 4.55e-14 72.0
MS.gene94275.t1 AT1G03630 27.615 239 146 7 64 284 89 318 5.19e-12 66.6
MS.gene94275.t1 AT1G03630 27.615 239 146 7 64 284 87 316 5.36e-12 66.6
MS.gene94275.t1 AT4G27440 27.917 240 145 7 64 284 88 318 3.68e-11 63.9
MS.gene94275.t1 AT4G27440 27.917 240 145 7 64 284 88 318 3.68e-11 63.9

Find 74 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCATTACCAACTGTTTA+AGG 0.080814 6.1:+29104553 MS.gene94275:CDS
TGATGTTACATTAACAATTT+TGG 0.129013 6.1:-29107161 None:intergenic
AAAGGATATGTTGTTGTTAT+TGG 0.179954 6.1:+29104788 MS.gene94275:CDS
AGAAGCATGGTCATAATAAA+TGG 0.181349 6.1:-29107106 None:intergenic
TTCCCTGCAGCAATGGCTTT+TGG 0.194468 6.1:+29106544 MS.gene94275:CDS
ATGACGCAAACGGGCTTATT+AGG 0.251000 6.1:-29104632 None:intergenic
TAGACCATAACAAAGATTAA+AGG 0.274006 6.1:+29106446 MS.gene94275:intron
GGGAAAGATTAATTTGATAA+AGG 0.295568 6.1:+29104451 MS.gene94275:CDS
CCAACCTTTAATCTTTGTTA+TGG 0.305478 6.1:-29106450 None:intergenic
GTTGATGAGGGAACAACATT+TGG 0.330001 6.1:+29107360 MS.gene94275:CDS
ACTGAAGCGTCTACGCCTAT+TGG 0.358663 6.1:+29108429 MS.gene94275:CDS
GCCACCCAAGACAGGCTTGC+TGG 0.372458 6.1:-29108397 None:intergenic
AGTAAGAGCGGCATCAATAA+TGG 0.377243 6.1:-29108476 None:intergenic
AGGAGATGTTGCAAGTATTC+CGG 0.389746 6.1:-29106609 None:intergenic
TGCATCAGTGTTGCAGATCC+TGG 0.392661 6.1:+29108343 MS.gene94275:intron
GTGTAGGCAACATCTGGCTT+GGG 0.397099 6.1:+29104737 MS.gene94275:intron
TCTTGAGAATGGCGTTGCTT+TGG 0.397354 6.1:+29104513 MS.gene94275:CDS
CTCGATTCAATTCTTGAGAA+TGG 0.397675 6.1:+29104502 MS.gene94275:CDS
TGTGTAGGCAACATCTGGCT+TGG 0.405184 6.1:+29104736 MS.gene94275:intron
TACTCATAGATCTGAGCATA+TGG 0.415666 6.1:-29107411 None:intergenic
TTGATGAGGGAACAACATTT+GGG 0.432599 6.1:+29107361 MS.gene94275:CDS
TTCTTCAGTTACTAATATGC+AGG 0.447497 6.1:+29107338 MS.gene94275:intron
AATCCAAAAGCCATTGCTGC+AGG 0.464036 6.1:-29106547 None:intergenic
ATGATCGGCACAAATTATAT+CGG 0.464816 6.1:+29107082 MS.gene94275:CDS
ACACCGGTGATGACGCAAAC+GGG 0.472541 6.1:-29104641 None:intergenic
CGCACTCAGAGGATTCCAAT+AGG 0.477071 6.1:-29108444 None:intergenic
GAAGCATGGTCATAATAAAT+GGG 0.477779 6.1:-29107105 None:intergenic
AAGTTCCAGCAAGCCTGTCT+TGG 0.478894 6.1:+29108392 MS.gene94275:CDS
ATGTTTGTTTGTACAACTCC+AGG 0.484002 6.1:-29108361 None:intergenic
AGTTCCAGCAAGCCTGTCTT+GGG 0.486423 6.1:+29108393 MS.gene94275:CDS
CACCGACAGCTTTGCCAGAT+GGG 0.488097 6.1:+29107556 MS.gene94275:CDS
TCTGATGAGATTTACCCATC+TGG 0.490381 6.1:-29107570 None:intergenic
ATGAGAAAATGCAACAGAAA+AGG 0.493406 6.1:-29104537 None:intergenic
GCATGCAAGCTTTCTAAGAA+AGG 0.493952 6.1:+29104770 MS.gene94275:CDS
AACGGGCTTATTAGGAAAAG+TGG 0.495799 6.1:-29104624 None:intergenic
ACTCTTTCTCCCAGGATGAT+CGG 0.513630 6.1:+29107067 MS.gene94275:intron
GGATTCCGATTTGCACTGCT+CGG 0.516338 6.1:+29106565 MS.gene94275:CDS
TACTAATATGCAGGTTGATG+AGG 0.517745 6.1:+29107347 MS.gene94275:CDS
TACACCGGTGATGACGCAAA+CGG 0.519389 6.1:-29104642 None:intergenic
AAGTGGAAGGTGAAGACCTT+GGG 0.521811 6.1:-29104607 None:intergenic
CAAAGAATGCCACCCAAGAC+AGG 0.524956 6.1:-29108405 None:intergenic
TAGCCCTCAGCTGTGACTCT+AGG 0.533229 6.1:-29106629 None:intergenic
GGTCAGCCTGAAAAGCTTTG+AGG 0.537092 6.1:-29106487 None:intergenic
CCACCGACAGCTTTGCCAGA+TGG 0.542711 6.1:+29107555 MS.gene94275:CDS
TTGTACCGAGCAGTGCAAAT+CGG 0.544351 6.1:-29106570 None:intergenic
AGAGCGAATCCTTAAACAGT+TGG 0.549305 6.1:-29104562 None:intergenic
TATTGGAATCCTCTGAGTGC+GGG 0.558043 6.1:+29108446 MS.gene94275:CDS
AAGCCCGTTTGCGTCATCAC+CGG 0.558096 6.1:+29104638 MS.gene94275:CDS
ACAGGACTGCTTTCAAGAAG+TGG 0.566270 6.1:-29107133 None:intergenic
ACTAATATGCAGGTTGATGA+GGG 0.578265 6.1:+29107348 MS.gene94275:CDS
CAAATACTAATAAACAATGC+CGG 0.578986 6.1:+29106590 MS.gene94275:CDS
TACCCATCTGGCAAAGCTGT+CGG 0.582388 6.1:-29107558 None:intergenic
TCAGTACTTCCCTGCAGCAA+TGG 0.583822 6.1:+29106537 MS.gene94275:CDS
CAGCCTGAAAAGCTTTGAGG+TGG 0.586814 6.1:-29106484 None:intergenic
ATCCAAAAGCCATTGCTGCA+GGG 0.600315 6.1:-29106546 None:intergenic
TCTCCTAGAGTCACAGCTGA+GGG 0.603093 6.1:+29106626 MS.gene94275:CDS
ACATCATTTACTCACCGAGC+TGG 0.604721 6.1:+29107178 MS.gene94275:CDS
TCCAGCAAGCCTGTCTTGGG+TGG 0.609392 6.1:+29108396 MS.gene94275:CDS
CCATAACAAAGATTAAAGGT+TGG 0.609730 6.1:+29106450 MS.gene94275:CDS
ATCTCCTAGAGTCACAGCTG+AGG 0.610478 6.1:+29106625 MS.gene94275:CDS
TAATTGACTCAACCGACGAA+AGG 0.612541 6.1:-29106508 None:intergenic
CCATCTGGCAAAGCTGTCGG+TGG 0.613785 6.1:-29107555 None:intergenic
ATCAGAGCAATTGTTGTCAG+AGG 0.617021 6.1:+29106338 MS.gene94275:CDS
AAGAAGTGGTAATAGAAGCA+TGG 0.625943 6.1:-29107119 None:intergenic
ACAAAATCATATCCTACCCA+AGG 0.631603 6.1:+29104591 MS.gene94275:CDS
CTATTGGAATCCTCTGAGTG+CGG 0.632369 6.1:+29108445 MS.gene94275:CDS
AAAGTGGAAGGTGAAGACCT+TGG 0.635841 6.1:-29104608 None:intergenic
AGCCTGAAAAGCTTTGAGGT+GGG 0.643587 6.1:-29106483 None:intergenic
AAATGATTATCCTACCAGCT+CGG 0.644742 6.1:-29107192 None:intergenic
ACTCACAGGCGGAGTAAGAG+CGG 0.648573 6.1:-29108488 None:intergenic
TCAAGAATTGAATCGAGCAG+AGG 0.649298 6.1:-29104496 None:intergenic
GGAAGGTGAAGACCTTGGGT+AGG 0.649927 6.1:-29104603 None:intergenic
GGAATCGTTCCCGCACTCAG+AGG 0.677353 6.1:-29108455 None:intergenic
GGCTTATTAGGAAAAGTGGA+AGG 0.680051 6.1:-29104620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTTATTATATTTC+TGG + chr6.1:29108268-29108287 MS.gene94275:intron 10.0%
!! AAAATTTCCCTAATTATTAT+TGG + chr6.1:29105758-29105777 MS.gene94275:intron 15.0%
!! AAATTTCCCTAATTATTATT+GGG + chr6.1:29105759-29105778 MS.gene94275:intron 15.0%
!! CTTAATCATAATTATCTTAA+CGG + chr6.1:29105492-29105511 MS.gene94275:intron 15.0%
!! TATATTAATTATTAGCAACA+TGG + chr6.1:29106368-29106387 MS.gene94275:intron 15.0%
!!! AAAGAAAATAAAAGTTGATT+TGG - chr6.1:29107615-29107634 None:intergenic 15.0%
!!! ATAAAAGGATTTAAAACATA+AGG - chr6.1:29104860-29104879 None:intergenic 15.0%
!!! ATTAAGTTTTAATGTTGTTA+TGG - chr6.1:29105478-29105497 None:intergenic 15.0%
!!! TAATTAAGATAATTGGTAAT+TGG + chr6.1:29105516-29105535 MS.gene94275:intron 15.0%
!!! TATGAATTTTTAAATTTGGT+AGG - chr6.1:29105323-29105342 None:intergenic 15.0%
!!! TTTTTTGAAAATAAGAATGA+AGG + chr6.1:29105615-29105634 MS.gene94275:intron 15.0%
!! AACATGAATAAAAATTAGAC+GGG + chr6.1:29108190-29108209 MS.gene94275:intron 20.0%
!! ATATCTTCCCAATAATAATT+AGG - chr6.1:29105769-29105788 None:intergenic 20.0%
!! CAGAAAATGAATATTAAAAG+TGG - chr6.1:29108315-29108334 None:intergenic 20.0%
!! CATAATTTATTTATGCTTTG+GGG + chr6.1:29106808-29106827 MS.gene94275:intron 20.0%
!! GAACATGAATAAAAATTAGA+CGG + chr6.1:29108189-29108208 MS.gene94275:intron 20.0%
!! GAAGATATTCAATAATCAAT+GGG + chr6.1:29105781-29105800 MS.gene94275:intron 20.0%
!! GCATAATTTATTTATGCTTT+GGG + chr6.1:29106807-29106826 MS.gene94275:intron 20.0%
!! TAACGGTTAATTAAGATAAT+TGG + chr6.1:29105509-29105528 MS.gene94275:intron 20.0%
!! TATCTTCCCAATAATAATTA+GGG - chr6.1:29105768-29105787 None:intergenic 20.0%
!! TGCATAATTTATTTATGCTT+TGG + chr6.1:29106806-29106825 MS.gene94275:intron 20.0%
!! TTCCAAAAATACAAATATAC+CGG - chr6.1:29105918-29105937 None:intergenic 20.0%
!! TTTAATGATAGGATTTGAAA+CGG + chr6.1:29105804-29105823 MS.gene94275:intron 20.0%
!!! ATCATTTTTTTTTTCTGTGT+AGG + chr6.1:29104721-29104740 MS.gene94275:intron 20.0%
!!! CATTTTTTCAAATAGTCTTT+TGG - chr6.1:29106259-29106278 None:intergenic 20.0%
!!! TAGGTTATTTGTTTTTGTAT+AGG + chr6.1:29107672-29107691 MS.gene94275:intron 20.0%
!!! TCTATTTTGTCAAATTTCTA+TGG + chr6.1:29105176-29105195 MS.gene94275:intron 20.0%
!!! TGATGTTACATTAACAATTT+TGG - chr6.1:29107164-29107183 None:intergenic 20.0%
!!! TGTTGTGTTTTTATAACTAT+AGG + chr6.1:29107653-29107672 MS.gene94275:intron 20.0%
!!! TTGATCAATTTTATTGTGAA+TGG - chr6.1:29104953-29104972 None:intergenic 20.0%
!!! TTTTTTTTGACTTTCTGATT+GGG + chr6.1:29105855-29105874 MS.gene94275:intron 20.0%
! AAAATAGAGGCTAATAATGA+AGG + chr6.1:29105580-29105599 MS.gene94275:intron 25.0%
! AAAGAAAAAAGAACTTACAC+CGG - chr6.1:29104660-29104679 None:intergenic 25.0%
! AAATAGTGTTGTAGAAATAG+TGG - chr6.1:29104894-29104913 None:intergenic 25.0%
! AACAAAAATACATGCTAGTT+AGG - chr6.1:29107503-29107522 None:intergenic 25.0%
! AAGGGTTGAATATAAAATAG+AGG + chr6.1:29105567-29105586 MS.gene94275:intron 25.0%
! AATAATGAAATTTGCAAGAG+AGG - chr6.1:29104687-29104706 None:intergenic 25.0%
! AGTTATAAAAACACAACACT+TGG - chr6.1:29107651-29107670 None:intergenic 25.0%
! ATAATGAAATTTGCAAGAGA+GGG - chr6.1:29104686-29104705 None:intergenic 25.0%
! ATCACAGTAATACTTTCATT+AGG - chr6.1:29107701-29107720 None:intergenic 25.0%
! ATTAAGTGATCTTACTCTTT+GGG + chr6.1:29107240-29107259 MS.gene94275:intron 25.0%
! CAAATACTAATAAACAATGC+CGG + chr6.1:29106590-29106609 MS.gene94275:CDS 25.0%
! GATAAATAATCTTGCATCAA+AGG - chr6.1:29106967-29106986 None:intergenic 25.0%
! GGAAGATATTCAATAATCAA+TGG + chr6.1:29105780-29105799 MS.gene94275:intron 25.0%
! GTTATAAAAACACAACACTT+GGG - chr6.1:29107650-29107669 None:intergenic 25.0%
! TAGACCATAACAAAGATTAA+AGG + chr6.1:29106446-29106465 MS.gene94275:intron 25.0%
! TATTAAGTGATCTTACTCTT+TGG + chr6.1:29107239-29107258 MS.gene94275:intron 25.0%
! TCCAAAAATACAAATATACC+GGG - chr6.1:29105917-29105936 None:intergenic 25.0%
!! AAAGCTTAAATCATTTTGCA+AGG - chr6.1:29108244-29108263 None:intergenic 25.0%
!! AAAGCTTTATATAATCACAG+TGG - chr6.1:29104985-29105004 None:intergenic 25.0%
!! AAAGGATATGTTGTTGTTAT+TGG + chr6.1:29104788-29104807 MS.gene94275:CDS 25.0%
!! GGGAAAGATTAATTTGATAA+AGG + chr6.1:29104451-29104470 MS.gene94275:CDS 25.0%
!! TAATCAATGGGTTTAATGAT+AGG + chr6.1:29105793-29105812 MS.gene94275:intron 25.0%
!!! AGTTCTGAACTTTGAATTAA+AGG + chr6.1:29107894-29107913 MS.gene94275:intron 25.0%
!!! ATATTTCTGGTTAATAACCA+TGG + chr6.1:29108281-29108300 MS.gene94275:intron 25.0%
!!! CTTATTGATTTTCTCTACAA+TGG + chr6.1:29107285-29107304 MS.gene94275:intron 25.0%
!!! GTTTTTTTTGACTTTCTGAT+TGG + chr6.1:29105854-29105873 MS.gene94275:intron 25.0%
!!! TTAAATGTCAACTTTTGAGA+TGG + chr6.1:29106853-29106872 MS.gene94275:intron 25.0%
!!! TTAACAATTTTGGAAGATAC+AGG - chr6.1:29107154-29107173 None:intergenic 25.0%
AAAATACAAATATACCGGGT+CGG - chr6.1:29105913-29105932 None:intergenic 30.0%
AAACCAAAAGTCACTCTTAT+TGG - chr6.1:29108140-29108159 None:intergenic 30.0%
AACAATTTGTAGGAAAGTCA+TGG - chr6.1:29107758-29107777 None:intergenic 30.0%
AACGGTTTAAGAGATTAAGA+AGG + chr6.1:29105822-29105841 MS.gene94275:intron 30.0%
ACGGTTTAAGAGATTAAGAA+GGG + chr6.1:29105823-29105842 MS.gene94275:intron 30.0%
ACTAAGACAATAGACAAACA+TGG - chr6.1:29107005-29107024 None:intergenic 30.0%
ATACATGCTAGTTAGGAATT+AGG - chr6.1:29107496-29107515 None:intergenic 30.0%
ATGAGAAAATGCAACAGAAA+AGG - chr6.1:29104540-29104559 None:intergenic 30.0%
ATGATCGGCACAAATTATAT+CGG + chr6.1:29107082-29107101 MS.gene94275:CDS 30.0%
ATTAAGATCTTCACAATGCA+TGG - chr6.1:29106405-29106424 None:intergenic 30.0%
ATTGACATAATCACGAGATT+TGG - chr6.1:29105030-29105049 None:intergenic 30.0%
ATTGTATCCTTAACAAGAGA+GGG - chr6.1:29107938-29107957 None:intergenic 30.0%
CAGAACTATATGAGAATTAC+TGG - chr6.1:29107881-29107900 None:intergenic 30.0%
CCAACCTTTAATCTTTGTTA+TGG - chr6.1:29106453-29106472 None:intergenic 30.0%
CCATAACAAAGATTAAAGGT+TGG + chr6.1:29106450-29106469 MS.gene94275:CDS 30.0%
CTATGAATATGGAATTGCAT+TGG + chr6.1:29105706-29105725 MS.gene94275:intron 30.0%
GAAAGAGTGGAAAATATAGT+TGG - chr6.1:29107055-29107074 None:intergenic 30.0%
GAAGCATGGTCATAATAAAT+GGG - chr6.1:29107108-29107127 None:intergenic 30.0%
GGTAGAAGACTGATTAAATA+AGG + chr6.1:29105660-29105679 MS.gene94275:intron 30.0%
TAATTAGCCAATGAGTTTGA+TGG + chr6.1:29108024-29108043 MS.gene94275:intron 30.0%
TACATGCTAGTTAGGAATTA+GGG - chr6.1:29107495-29107514 None:intergenic 30.0%
TGGTGTATGTGTCTATATAT+TGG + chr6.1:29106177-29106196 MS.gene94275:intron 30.0%
TGTTATGGTCTATCAAACAA+CGG - chr6.1:29106438-29106457 None:intergenic 30.0%
TTAAATAAGGAACGTAAGAG+AGG + chr6.1:29105673-29105692 MS.gene94275:intron 30.0%
TTCAATAAACCCATGAATCA+TGG - chr6.1:29105739-29105758 None:intergenic 30.0%
TTCTCATTACCAACTGTTTA+AGG + chr6.1:29104553-29104572 MS.gene94275:CDS 30.0%
TTCTTCAGTTACTAATATGC+AGG + chr6.1:29107338-29107357 MS.gene94275:intron 30.0%
! AATATGGAATTGCATTGGTA+AGG + chr6.1:29105711-29105730 MS.gene94275:intron 30.0%
! ACAATTTTTGTCTCCCAAAA+AGG + chr6.1:29107970-29107989 MS.gene94275:intron 30.0%
! ACCCGGTATATTTGTATTTT+TGG + chr6.1:29105913-29105932 MS.gene94275:intron 30.0%
! ACCTTTTATTGTGTTATGCA+AGG - chr6.1:29106747-29106766 None:intergenic 30.0%
! AGAAGCATGGTCATAATAAA+TGG - chr6.1:29107109-29107128 None:intergenic 30.0%
! ATCAAACTCATTGGCTAATT+AGG - chr6.1:29108025-29108044 None:intergenic 30.0%
! CATTTTTCCATCAAACTCAT+TGG - chr6.1:29108034-29108053 None:intergenic 30.0%
! CTATATGAGAATTACTGGTT+TGG - chr6.1:29107876-29107895 None:intergenic 30.0%
! GATAATTGGTAATTGGTACT+TGG + chr6.1:29105523-29105542 MS.gene94275:intron 30.0%
! GTACAATGGATGCATTTTTA+TGG + chr6.1:29106939-29106958 MS.gene94275:intron 30.0%
! GTGGATTGTTAGCATATAAA+AGG - chr6.1:29104875-29104894 None:intergenic 30.0%
! TTGGAAAATGAAGCACTAAT+CGG + chr6.1:29105932-29105951 MS.gene94275:intron 30.0%
!! AGAAGCATTTGTATGTACAA+TGG + chr6.1:29106925-29106944 MS.gene94275:intron 30.0%
!! GGTGTTATTTATGCAACAAT+AGG - chr6.1:29108119-29108138 None:intergenic 30.0%
!! TTATTTATGCTTTGGGGATA+TGG + chr6.1:29106814-29106833 MS.gene94275:intron 30.0%
!!! AAAATTCGTTTTTTGCGATC+CGG + chr6.1:29105878-29105897 MS.gene94275:intron 30.0%
AAATACAAATATACCGGGTC+GGG - chr6.1:29105912-29105931 None:intergenic 35.0%
AAATGATTATCCTACCAGCT+CGG - chr6.1:29107195-29107214 None:intergenic 35.0%
AACCACTAACACAGAAGATT+AGG - chr6.1:29106678-29106697 None:intergenic 35.0%
AAGAAGTGGTAATAGAAGCA+TGG - chr6.1:29107122-29107141 None:intergenic 35.0%
AATTAGGTAGTTGTAGCTTC+AGG - chr6.1:29108009-29108028 None:intergenic 35.0%
ACAAAATCATATCCTACCCA+AGG + chr6.1:29104591-29104610 MS.gene94275:CDS 35.0%
ACAAGACACTATGTTCTGAT+TGG - chr6.1:29107839-29107858 None:intergenic 35.0%
ACTTTCTATTAGTGCATGTC+TGG - chr6.1:29105064-29105083 None:intergenic 35.0%
AGACATGCACTAATAGAAAG+TGG + chr6.1:29105063-29105082 MS.gene94275:intron 35.0%
AGCATTCTTACCTAAATTCC+TGG + chr6.1:29106293-29106312 MS.gene94275:intron 35.0%
AGTTGTGCAGAAAAGAACTT+GGG - chr6.1:29107785-29107804 None:intergenic 35.0%
ATGTTTGTTTGTACAACTCC+AGG - chr6.1:29108364-29108383 None:intergenic 35.0%
ATTAGGTAGTTGTAGCTTCA+GGG - chr6.1:29108008-29108027 None:intergenic 35.0%
CACAACACTTGGGAAAAAAA+TGG - chr6.1:29107640-29107659 None:intergenic 35.0%
CATTGTATCCTTAACAAGAG+AGG - chr6.1:29107939-29107958 None:intergenic 35.0%
CTCGATTCAATTCTTGAGAA+TGG + chr6.1:29104502-29104521 MS.gene94275:CDS 35.0%
GAAGTTGAGTGCTATGAATA+TGG + chr6.1:29105695-29105714 MS.gene94275:intron 35.0%
GAATCGGAAAATGGTAAGAA+CGG - chr6.1:29106057-29106076 None:intergenic 35.0%
GCCTTGCATAACACAATAAA+AGG + chr6.1:29106743-29106762 MS.gene94275:intron 35.0%
GCTTTATATAATCACAGTGG+CGG - chr6.1:29104982-29105001 None:intergenic 35.0%
GGTAGAACAGAACAAGAAAA+GGG + chr6.1:29105549-29105568 MS.gene94275:intron 35.0%
TAAAAGTGGAGTAGAAACCA+TGG - chr6.1:29108301-29108320 None:intergenic 35.0%
TACTCATAGATCTGAGCATA+TGG - chr6.1:29107414-29107433 None:intergenic 35.0%
TATCAGTTCCATAAAGTTCC+TGG - chr6.1:29106902-29106921 None:intergenic 35.0%
TCAATCCATACCAGGAATTT+AGG - chr6.1:29106306-29106325 None:intergenic 35.0%
TCTTACCTAAATTCCTGGTA+TGG + chr6.1:29106298-29106317 MS.gene94275:intron 35.0%
TGGTAGAACAGAACAAGAAA+AGG + chr6.1:29105548-29105567 MS.gene94275:intron 35.0%
TTCCTAATCTTCTGTGTTAG+TGG + chr6.1:29106673-29106692 MS.gene94275:intron 35.0%
TTGATGAGGGAACAACATTT+GGG + chr6.1:29107361-29107380 MS.gene94275:CDS 35.0%
TTGTATCCTTAACAAGAGAG+GGG - chr6.1:29107937-29107956 None:intergenic 35.0%
TTGTTGTCTGCAGAAGTAAT+TGG + chr6.1:29105639-29105658 MS.gene94275:intron 35.0%
! ACACCAATAAGAGTGACTTT+TGG + chr6.1:29108134-29108153 MS.gene94275:intron 35.0%
! TGGAAAATGAAGCACTAATC+GGG + chr6.1:29105933-29105952 MS.gene94275:intron 35.0%
! TTCTTACCATTTTCCGATTC+CGG + chr6.1:29106057-29106076 MS.gene94275:intron 35.0%
! TTCTTTTCTGCACAACTCAT+TGG + chr6.1:29107788-29107807 MS.gene94275:intron 35.0%
! TTGGTAATTGGTACTTGGTA+TGG + chr6.1:29105528-29105547 MS.gene94275:intron 35.0%
!! ACTAATATGCAGGTTGATGA+GGG + chr6.1:29107348-29107367 MS.gene94275:CDS 35.0%
!! TACTAATATGCAGGTTGATG+AGG + chr6.1:29107347-29107366 MS.gene94275:CDS 35.0%
!!! AAATTCGTTTTTTGCGATCC+GGG + chr6.1:29105879-29105898 MS.gene94275:intron 35.0%
!!! AACTCATTGGCTCTTTCTTT+TGG + chr6.1:29107801-29107820 MS.gene94275:intron 35.0%
AGAGCGAATCCTTAAACAGT+TGG - chr6.1:29104565-29104584 None:intergenic 40.0%
AGAGCTTGAGAAGGTTCTAT+AGG - chr6.1:29107317-29107336 None:intergenic 40.0%
AGGAGATGTTGCAAGTATTC+CGG - chr6.1:29106612-29106631 None:intergenic 40.0%
AGTAAGAGCGGCATCAATAA+TGG - chr6.1:29108479-29108498 None:intergenic 40.0%
ATCAGAGCAATTGTTGTCAG+AGG + chr6.1:29106338-29106357 MS.gene94275:CDS 40.0%
ATTTGCATGACATGATCACC+AGG + chr6.1:29106881-29106900 MS.gene94275:intron 40.0%
CATGATCACCAGGAACTTTA+TGG + chr6.1:29106891-29106910 MS.gene94275:intron 40.0%
CGTGGTCTAGGTTATTTAGT+GGG + chr6.1:29106210-29106229 MS.gene94275:intron 40.0%
CTCGAGATCCTAAGTAAGAT+CGG + chr6.1:29105246-29105265 MS.gene94275:intron 40.0%
CTGAAGAAAAGAGCTTGAGA+AGG - chr6.1:29107326-29107345 None:intergenic 40.0%
CTTGGGAAGCAACAATTTGT+AGG - chr6.1:29107768-29107787 None:intergenic 40.0%
GAGTTGTGCAGAAAAGAACT+TGG - chr6.1:29107786-29107805 None:intergenic 40.0%
GGCTTATTAGGAAAAGTGGA+AGG - chr6.1:29104623-29104642 None:intergenic 40.0%
GGTAAGGTTCCATGATTCAT+GGG + chr6.1:29105727-29105746 MS.gene94275:intron 40.0%
TAGTCACAACTCACAAGTGT+CGG - chr6.1:29105143-29105162 None:intergenic 40.0%
TCAAGAATTGAATCGAGCAG+AGG - chr6.1:29104499-29104518 None:intergenic 40.0%
TCGAGATCCTAAGTAAGATC+GGG + chr6.1:29105247-29105266 MS.gene94275:intron 40.0%
TCTGATGAGATTTACCCATC+TGG - chr6.1:29107573-29107592 None:intergenic 40.0%
TGGTAAGGTTCCATGATTCA+TGG + chr6.1:29105726-29105745 MS.gene94275:intron 40.0%
TTAGGTAGTTGTAGCTTCAG+GGG - chr6.1:29108007-29108026 None:intergenic 40.0%
TTTCTATGGTGTCTATGCGT+CGG + chr6.1:29105190-29105209 MS.gene94275:intron 40.0%
! AACGGGCTTATTAGGAAAAG+TGG - chr6.1:29104627-29104646 None:intergenic 40.0%
! ATAATTTGTGCCGATCATCC+TGG - chr6.1:29107080-29107099 None:intergenic 40.0%
! GCATGCAAGCTTTCTAAGAA+AGG + chr6.1:29104770-29104789 MS.gene94275:CDS 40.0%
! GTTGATGAGGGAACAACATT+TGG + chr6.1:29107360-29107379 MS.gene94275:CDS 40.0%
! TAATTGACTCAACCGACGAA+AGG - chr6.1:29106511-29106530 None:intergenic 40.0%
! TAATTTGTGCCGATCATCCT+GGG - chr6.1:29107079-29107098 None:intergenic 40.0%
! TATATTGGTGCTTCATTGCG+TGG + chr6.1:29106192-29106211 MS.gene94275:intron 40.0%
! TATTTTCCACTCTTTCTCCC+AGG + chr6.1:29107059-29107078 MS.gene94275:intron 40.0%
! TTTTCTGTGTAGGCAACATC+TGG + chr6.1:29104731-29104750 MS.gene94275:intron 40.0%
AAAGTGGAAGGTGAAGACCT+TGG - chr6.1:29104611-29104630 None:intergenic 45.0%
AAGTGGAAGGTGAAGACCTT+GGG - chr6.1:29104610-29104629 None:intergenic 45.0%
AATCCAAAAGCCATTGCTGC+AGG - chr6.1:29106550-29106569 None:intergenic 45.0%
ACAGGACTGCTTTCAAGAAG+TGG - chr6.1:29107136-29107155 None:intergenic 45.0%
ACATCATTTACTCACCGAGC+TGG + chr6.1:29107178-29107197 MS.gene94275:CDS 45.0%
ACTCTTTCTCCCAGGATGAT+CGG + chr6.1:29107067-29107086 MS.gene94275:intron 45.0%
AGGTTGGAAACCCAGAAAAC+CGG - chr6.1:29105979-29105998 None:intergenic 45.0%
AGTGCGTGTTTGACATGTGT+TGG + chr6.1:29105114-29105133 MS.gene94275:intron 45.0%
ATCCAAAAGCCATTGCTGCA+GGG - chr6.1:29106549-29106568 None:intergenic 45.0%
ATCTGGACCGTAGAATCGTA+CGG - chr6.1:29106122-29106141 None:intergenic 45.0%
CAATACACCAGACACAACCA+TGG - chr6.1:29106159-29106178 None:intergenic 45.0%
CATGGTTGTGTCTGGTGTAT+TGG + chr6.1:29106157-29106176 MS.gene94275:intron 45.0%
GAAACTCACTTGTGCACTTG+TGG + chr6.1:29108083-29108102 MS.gene94275:intron 45.0%
GATCCTAAGTAAGATCGGGA+AGG + chr6.1:29105251-29105270 MS.gene94275:intron 45.0%
GATCGAGAGTTTGTCTACCA+TGG + chr6.1:29106139-29106158 MS.gene94275:intron 45.0%
GATCTCGAGTTTGTCTACCA+TGG - chr6.1:29105235-29105254 None:intergenic 45.0%
GCGTGGTCTAGGTTATTTAG+TGG + chr6.1:29106209-29106228 MS.gene94275:intron 45.0%
GGAAAATGGTAAGAACGGCT+TGG - chr6.1:29106052-29106071 None:intergenic 45.0%
TCACTTGTGCACTTGTGGTT+GGG + chr6.1:29108088-29108107 MS.gene94275:intron 45.0%
TCAGTGTTGTGTTGTGTCCA+TGG + chr6.1:29105215-29105234 MS.gene94275:intron 45.0%
TCTGGGTTTCCAACCTAACT+CGG + chr6.1:29105983-29106002 MS.gene94275:intron 45.0%
TCTTGAGAATGGCGTTGCTT+TGG + chr6.1:29104513-29104532 MS.gene94275:CDS 45.0%
TGCGAGCAGATACACTCTTA+TGG + chr6.1:29108061-29108080 MS.gene94275:intron 45.0%
TGGTAGACAAACTCTCGATC+TGG - chr6.1:29106139-29106158 None:intergenic 45.0%
TTGTACCGAGCAGTGCAAAT+CGG - chr6.1:29106573-29106592 None:intergenic 45.0%
TTGTCTACCATGGTTGTGTC+TGG + chr6.1:29106149-29106168 MS.gene94275:intron 45.0%
! ATGACGCAAACGGGCTTATT+AGG - chr6.1:29104635-29104654 None:intergenic 45.0%
! CTGGTATGGATTGATGCAGT+GGG + chr6.1:29106312-29106331 MS.gene94275:intron 45.0%
! GGAAGCATGCACTTAGAAAG+TGG - chr6.1:29104932-29104951 None:intergenic 45.0%
!! AGCCTGAAAAGCTTTGAGGT+GGG - chr6.1:29106486-29106505 None:intergenic 45.0%
!! GGAGGAGTATGCTCCTTTTT+GGG - chr6.1:29107986-29108005 None:intergenic 45.0%
!! TTTTCAGGCTGACCTTTCGT+CGG + chr6.1:29106496-29106515 MS.gene94275:CDS 45.0%
!!! TATATATGAATTTTTAAATT+TGG - chr6.1:29105327-29105346 None:intergenic 5.0%
AACGTAGATCCAGCCGAGTT+AGG - chr6.1:29105999-29106018 None:intergenic 50.0%
AAGTTCCAGCAAGCCTGTCT+TGG + chr6.1:29108392-29108411 MS.gene94275:CDS 50.0%
ACCCATGAGATCGTGAATCG+GGG + chr6.1:29105274-29105293 MS.gene94275:intron 50.0%
AGTTCCAGCAAGCCTGTCTT+GGG + chr6.1:29108393-29108412 MS.gene94275:CDS 50.0%
ATCTCCTAGAGTCACAGCTG+AGG + chr6.1:29106625-29106644 MS.gene94275:CDS 50.0%
CAAAGAATGCCACCCAAGAC+AGG - chr6.1:29108408-29108427 None:intergenic 50.0%
CATTTACTCACCGAGCTGGT+AGG + chr6.1:29107182-29107201 MS.gene94275:intron 50.0%
CCACTGCATCAATCCATACC+AGG - chr6.1:29106314-29106333 None:intergenic 50.0%
CGTGGAACCGTACGATTCTA+CGG + chr6.1:29106112-29106131 MS.gene94275:intron 50.0%
CTCACTTGTGCACTTGTGGT+TGG + chr6.1:29108087-29108106 MS.gene94275:intron 50.0%
GACCCATGAGATCGTGAATC+GGG + chr6.1:29105273-29105292 MS.gene94275:intron 50.0%
GATCATCCTGGGAGAAAGAG+TGG - chr6.1:29107068-29107087 None:intergenic 50.0%
GGACCCATGAGATCGTGAAT+CGG + chr6.1:29105272-29105291 MS.gene94275:intron 50.0%
GGTCAGCCTGAAAAGCTTTG+AGG - chr6.1:29106490-29106509 None:intergenic 50.0%
GGTCCTTCCCGATCTTACTT+AGG - chr6.1:29105257-29105276 None:intergenic 50.0%
GGTTGGAAACCCAGAAAACC+GGG - chr6.1:29105978-29105997 None:intergenic 50.0%
TACCCATCTGGCAAAGCTGT+CGG - chr6.1:29107561-29107580 None:intergenic 50.0%
TACGCACCCCTCTCTTGTTA+AGG + chr6.1:29107928-29107947 MS.gene94275:intron 50.0%
TAGATCCAGCCGAGTTAGGT+TGG - chr6.1:29105995-29106014 None:intergenic 50.0%
TCAGTACTTCCCTGCAGCAA+TGG + chr6.1:29106537-29106556 MS.gene94275:CDS 50.0%
TCTCCTAGAGTCACAGCTGA+GGG + chr6.1:29106626-29106645 MS.gene94275:CDS 50.0%
TGAATCGGGGGATCGTAACA+CGG + chr6.1:29105287-29105306 MS.gene94275:intron 50.0%
TGCAAGGCAAAGCATGAGCA+TGG - chr6.1:29106731-29106750 None:intergenic 50.0%
TGCATCAGTGTTGCAGATCC+TGG + chr6.1:29108343-29108362 MS.gene94275:intron 50.0%
TGTGTAGGCAACATCTGGCT+TGG + chr6.1:29104736-29104755 MS.gene94275:intron 50.0%
! CCTGGTATGGATTGATGCAG+TGG + chr6.1:29106311-29106330 MS.gene94275:intron 50.0%
! GGATTCCGATTTGCACTGCT+CGG + chr6.1:29106565-29106584 MS.gene94275:CDS 50.0%
! GTGTAGGCAACATCTGGCTT+GGG + chr6.1:29104737-29104756 MS.gene94275:intron 50.0%
! TACACCGGTGATGACGCAAA+CGG - chr6.1:29104645-29104664 None:intergenic 50.0%
! TGCCCACCTCAAAGCTTTTC+AGG + chr6.1:29106481-29106500 MS.gene94275:CDS 50.0%
! TTCCCTGCAGCAATGGCTTT+TGG + chr6.1:29106544-29106563 MS.gene94275:CDS 50.0%
!! CAGCCTGAAAAGCTTTGAGG+TGG - chr6.1:29106487-29106506 None:intergenic 50.0%
!! GGGAGGAGTATGCTCCTTTT+TGG - chr6.1:29107987-29108006 None:intergenic 50.0%
AACCCAGAAAACCGGGTTCG+CGG - chr6.1:29105971-29105990 None:intergenic 55.0%
AAGCCCGTTTGCGTCATCAC+CGG + chr6.1:29104638-29104657 MS.gene94275:CDS 55.0%
AGGTGGCCGGAATCGGAAAA+TGG - chr6.1:29106066-29106085 None:intergenic 55.0%
CACCGACAGCTTTGCCAGAT+GGG + chr6.1:29107556-29107575 MS.gene94275:CDS 55.0%
CCCATGAGATCGTGAATCGG+GGG + chr6.1:29105275-29105294 MS.gene94275:intron 55.0%
CCCCCGATTCACGATCTCAT+GGG - chr6.1:29105278-29105297 None:intergenic 55.0%
CCTATGAGCACGAAGAGGTC+AGG + chr6.1:29106083-29106102 MS.gene94275:intron 55.0%
CCTGACCTCTTCGTGCTCAT+AGG - chr6.1:29106086-29106105 None:intergenic 55.0%
GAAGAGGTCAGGCAAGATCG+TGG + chr6.1:29106094-29106113 MS.gene94275:intron 55.0%
GACCTCTTCGTGCTCATAGG+TGG - chr6.1:29106083-29106102 None:intergenic 55.0%
GGAAGGTGAAGACCTTGGGT+AGG - chr6.1:29104606-29104625 None:intergenic 55.0%
GGTAGTTGTAGCTTCAGGGG+AGG - chr6.1:29108004-29108023 None:intergenic 55.0%
GGTGCTTCATTGCGTGGTCT+AGG + chr6.1:29106198-29106217 MS.gene94275:intron 55.0%
GGTTTCCAACCTAACTCGGC+TGG + chr6.1:29105987-29106006 MS.gene94275:intron 55.0%
TAGCCCTCAGCTGTGACTCT+AGG - chr6.1:29106632-29106651 None:intergenic 55.0%
TCCCCCGATTCACGATCTCA+TGG - chr6.1:29105279-29105298 None:intergenic 55.0%
TCTTCGTGCTCATAGGTGGC+CGG - chr6.1:29106079-29106098 None:intergenic 55.0%
TGCTCATAGGTGGCCGGAAT+CGG - chr6.1:29106073-29106092 None:intergenic 55.0%
! ACACCGGTGATGACGCAAAC+GGG - chr6.1:29104644-29104663 None:intergenic 55.0%
! AGCGAGTGTTGCGATTCGCA+AGG + chr6.1:29108161-29108180 MS.gene94275:intron 55.0%
ACCCAGAAAACCGGGTTCGC+GGG - chr6.1:29105970-29105989 None:intergenic 60.0%
ATGCCGCTCTTACTCCGCCT+TGG + chr6.1:29108485-29108504 MS.gene94275:CDS 60.0%
CCACCGACAGCTTTGCCAGA+TGG + chr6.1:29107555-29107574 MS.gene94275:CDS 60.0%
CCATCTGGCAAAGCTGTCGG+TGG - chr6.1:29107558-29107577 None:intergenic 60.0%
CCCGCACTCAGAGGATTCCA+AGG - chr6.1:29108449-29108468 None:intergenic 60.0%
GGAATCGTTCCCGCACTCAG+AGG - chr6.1:29108458-29108477 None:intergenic 60.0%
GGCCACCTATGAGCACGAAG+AGG + chr6.1:29106078-29106097 MS.gene94275:intron 60.0%
TCCAGCAAGCCTGTCTTGGG+TGG + chr6.1:29108396-29108415 MS.gene94275:CDS 60.0%
! ACCCGCGAACCCGGTTTTCT+GGG + chr6.1:29105966-29105985 MS.gene94275:intron 60.0%
ACCGCGTCCACGACTTTGCG+CGG + chr6.1:29106022-29106041 MS.gene94275:intron 65.0%
CACGAAACGACCCGCGAACC+CGG + chr6.1:29105957-29105976 MS.gene94275:intron 65.0%
GCCACCCAAGACAGGCTTGC+TGG - chr6.1:29108400-29108419 None:intergenic 65.0%
TGGATCGCCGCGCAAAGTCG+TGG - chr6.1:29106032-29106051 None:intergenic 65.0%
! GACCCGCGAACCCGGTTTTC+TGG + chr6.1:29105965-29105984 MS.gene94275:intron 65.0%
ACCGGGTCGGGTTCGTGACC+CGG - chr6.1:29105900-29105919 None:intergenic 70.0%
GCCGCGCAAAGTCGTGGACG+CGG - chr6.1:29106026-29106045 None:intergenic 70.0%
GCGCAAAGTCGTGGACGCGG+TGG - chr6.1:29106023-29106042 None:intergenic 70.0%
TCCGGGTCACGAACCCGACC+CGG + chr6.1:29105896-29105915 MS.gene94275:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 29104449 29108504 29104449 ID=MS.gene94275
chr6.1 mRNA 29104449 29108504 29104449 ID=MS.gene94275.t1;Parent=MS.gene94275
chr6.1 exon 29104449 29104661 29104449 ID=MS.gene94275.t1.exon1;Parent=MS.gene94275.t1
chr6.1 CDS 29104449 29104661 29104449 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29104743 29104809 29104743 ID=MS.gene94275.t1.exon2;Parent=MS.gene94275.t1
chr6.1 CDS 29104743 29104809 29104743 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29106331 29106359 29106331 ID=MS.gene94275.t1.exon3;Parent=MS.gene94275.t1
chr6.1 CDS 29106331 29106359 29106331 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29106449 29106657 29106449 ID=MS.gene94275.t1.exon4;Parent=MS.gene94275.t1
chr6.1 CDS 29106449 29106657 29106449 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29107081 29107199 29107081 ID=MS.gene94275.t1.exon5;Parent=MS.gene94275.t1
chr6.1 CDS 29107081 29107199 29107081 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29107346 29107441 29107346 ID=MS.gene94275.t1.exon6;Parent=MS.gene94275.t1
chr6.1 CDS 29107346 29107441 29107346 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29107527 29107602 29107527 ID=MS.gene94275.t1.exon7;Parent=MS.gene94275.t1
chr6.1 CDS 29107527 29107602 29107527 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
chr6.1 exon 29108351 29108504 29108351 ID=MS.gene94275.t1.exon8;Parent=MS.gene94275.t1
chr6.1 CDS 29108351 29108504 29108351 ID=cds.MS.gene94275.t1;Parent=MS.gene94275.t1
Gene Sequence

>MS.gene94275

ATGGGAAAGATTAATTTGATAAAGGATTTATTACAATCTATCTATTTCCTCTGCTCGATTCAATTCTTGAGAATGGCGTTGCTTTGGACCTTTTCTGTTGCATTTTCTCATTACCAACTGTTTAAGGATTCGCTCTTTTCTCACAAAATCATATCCTACCCAAGGTCTTCACCTTCCACTTTTCCTAATAAGCCCGTTTGCGTCATCACCGGTGTAAGTTCTTTTTTCTTTCTTCCCTCTCTTGCAAATTTCATTATTACTATGTGAATTCTATCATTTTTTTTTTCTGTGTAGGCAACATCTGGCTTGGGATTATCTACTGCATGCAAGCTTTCTAAGAAAGGATATGTTGTTGTTATTGGTAATTCTTTATTCTTTTTGCTAATCACGTTACAAATGCTTACAATACCTTATGTTTTAAATCCTTTTATATGCTAACAATCCACTATTTCTACAACACTATTTAATTCTAAGTGAAATCCACTTTCTAAGTGCATGCTTCCATTCACAATAAAATTGATCAAATTACACCGCCACTGTGATTATATAAAGCTTTATATCTAAACTGTAGTTTTTGTCCAAATCTCGTGATTATGTCAATCTCACATCAATCCAGACATGCACTAATAGAAAGTGGATCTATGTATCATCGAAGCTTCAGACTAAGTGCGTGTTTGACATGTGTTGGTGTCCGACACTTGTGAGTTGTGACTAAAATACAATCATTTCTATTTTGTCAAATTTCTATGGTGTCTATGCGTCGGTGTCAGTGTTGTGTTGTGTCCATGGTAGACAAACTCGAGATCCTAAGTAAGATCGGGAAGGACCCATGAGATCGTGAATCGGGGGATCGTAACACGGATCGTAAGATCCTACCAAATTTAAAAATTCATATATATTGCATATAAATTCATACATACTCATATGAAGCAACATAATTTGATAGAAAAAAAAACTTTAAATAAAACTCAAATTCATTAATAGAAAAAGAAAAAAAAAACACTTAAAAACAGTACTCATACAACTCCATAACAACATTAAAACTTAATCATAATTATCTTAACGGTTAATTAAGATAATTGGTAATTGGTACTTGGTATGGTAGAACAGAACAAGAAAAGGGTTGAATATAAAATAGAGGCTAATAATGAAGGATTTTTTTTTATTTTTTTGAAAATAAGAATGAAGGATTGTTGTCTGCAGAAGTAATTGGTAGAAGACTGATTAAATAAGGAACGTAAGAGAGGAAGTTGAGTGCTATGAATATGGAATTGCATTGGTAAGGTTCCATGATTCATGGGTTTATTGAAAAATTTCCCTAATTATTATTGGGAAGATATTCAATAATCAATGGGTTTAATGATAGGATTTGAAACGGTTTAAGAGATTAAGAAGGGTGAAAAACGTTTTTTTTGACTTTCTGATTGGGAAAATTCGTTTTTTGCGATCCGGGTCACGAACCCGACCCGGTATATTTGTATTTTTGGAAAATGAAGCACTAATCGGGTCACGAAACGACCCGCGAACCCGGTTTTCTGGGTTTCCAACCTAACTCGGCTGGATCTACGTTACCACCGCGTCCACGACTTTGCGCGGCGATCCAAGCCGTTCTTACCATTTTCCGATTCCGGCCACCTATGAGCACGAAGAGGTCAGGCAAGATCGTGGAACCGTACGATTCTACGGTCCAGATCGAGAGTTTGTCTACCATGGTTGTGTCTGGTGTATTGGTGTATGTGTCTATATATTGGTGCTTCATTGCGTGGTCTAGGTTATTTAGTGGGATTTATTCAATAATAGAGTGTGTCCAAAAGACTATTTGAAAAAATGTGCTGCTACTTGCTAGCATTCTTACCTAAATTCCTGGTATGGATTGATGCAGTGGGAAGATCAGAGCAATTGTTGTCAGAGGTATTTTCTATATTAATTATTAGCAACATGGTAATGTTGATTCCATGCATTGTGAAGATCTTAATTGTGTTCTTTCCGTTGTTTGATAGACCATAACAAAGATTAAAGGTTGGAATGAAGATGCCCACCTCAAAGCTTTTCAGGCTGACCTTTCGTCGGTTGAGTCAATTATAAAGTTCAGTACTTCCCTGCAGCAATGGCTTTTGGATTCCGATTTGCACTGCTCGGTACAAATACTAATAAACAATGCCGGAATACTTGCAACATCTCCTAGAGTCACAGCTGAGGGCTACGATCAGTAATTACTTTTTTTTTCCTAATCTTCTGTGTTAGTGGTTAACAAAATTCTATCTTTATCATTGAAACTGCCATGCTCATGCTTTGCCTTGCATAACACAATAAAAGGTGCATTAGACACACTTTCAAATAATATTATTTTCGTAATCTGCATAATTTATTTATGCTTTGGGGATATGGTAATACTTATTATTAATTAAATGTCAACTTTTGAGATGGTGTTGATTTGCATGACATGATCACCAGGAACTTTATGGAACTGATAGTTAGAAGCATTTGTATGTACAATGGATGCATTTTTATGGAGCCTTTGATGCAAGATTATTTATCTGTTTTATATCTGCTCCATGTTTGTCTATTGTCTTAGTTTCAAAATTAGTAGTTACTCTTAAAATCCAACTATATTTTCCACTCTTTCTCCCAGGATGATCGGCACAAATTATATCGGCCCATTTATTATGACCATGCTTCTATTACCACTTCTTGAAAGCAGTCCTGTATCTTCCAAAATTGTTAATGTAACATCATTTACTCACCGAGCTGGTAGGATAATCATTTTAGTACTCATTTTTTGATTTATATTATTAAGTGATCTTACTCTTTGGGTTTTACTGTCTTTCATAAAATACTTATTGATTTTCTCTACAATGGCGCACTCCTATAGAACCTTCTCAAGCTCTTTTCTTCAGTTACTAATATGCAGGTTGATGAGGGAACAACATTTGGGAAGAGATTTTTAAAATCAAAACAATATCCATATGCTCAGATCTATGAGTATTCAAAATGTAAGCTGCATATTCTGAATGAACTTATATAGATTACACTGTATCTTTAGCCCTAATTCCTAACTAGCATGTATTTTTGTTGAAGTATGTCTACTTCTCTTCTCATATGAGCTCCACCGACAGCTTTGCCAGATGGGTAAATCTCATCAGATATTTGTCAAGTATGTTTACCAAATCAACTTTTATTTTCTTTTGCCATTTTTTTCCCAAGTGTTGTGTTTTTATAACTATAGGTTATTTGTTTTTGTATAGGTTACCTAATGAAAGTATTACTGTGATCTTCGTTGCTCGAATATGTTTTTTTTGATTGCTTCCATGACTTTCCTACAAATTGTTGCTTCCCAAGTTCTTTTCTGCACAACTCATTGGCTCTTTCTTTTGGCAAATGTATATGCCAATCAGAACATAGTGTCTTGTCTGTCGATCTCATGCCAAACCAGTAATTCTCATATAGTTCTGAACTTTGAATTAAAGGTTGAGATCTGTTACGCACCCCTCTCTTGTTAAGGATACAATGAAGCTACTATCACAATTTTTGTCTCCCAAAAAGGAGCATACTCCTCCCCTGAAGCTACAACTACCTAATTAGCCAATGAGTTTGATGGAAAAATGTTTTAAGTGCGAGCAGATACACTCTTATGGAAACTCACTTGTGCACTTGTGGTTGGGTTTAACCTATTGTTGCATAAATAACACCAATAAGAGTGACTTTTGGTTTGAGCGAGTGTTGCGATTCGCAAGGAAAACGAACATGAATAAAAATTAGACGGGAAAATAAAAAATTGCTAGAAAAAGAGAGCCTTGCAAAATGATTTAAGCTTTGTAGAAAAAACTTTATTATATTTCTGGTTAATAACCATGGTTTCTACTCCACTTTTAATATTCATTTTCTGTATTGCTATGCATCAGTGTTGCAGATCCTGGAGTTGTACAAACAAACATCATGCGAGAAGTTCCAGCAAGCCTGTCTTGGGTGGCATTCTTTGTACTGAAGCGTCTACGCCTATTGGAATCCTCTGAGTGCGGGAACGATTCCATTATTGATGCCGCTCTTACTCCGCCT
Protein sequence

>MS.gene94275.t1

MGKINLIKDLLQSIYFLCSIQFLRMALLWTFSVAFSHYQLFKDSLFSHKIISYPRSSPSTFPNKPVCVITGATSGLGLSTACKLSKKGYVVVIVGRSEQLLSETITKIKGWNEDAHLKAFQADLSSVESIIKFSTSLQQWLLDSDLHCSVQILINNAGILATSPRVTAEGYDQMIGTNYIGPFIMTMLLLPLLESSPVSSKIVNVTSFTHRAVTNMQVDEGTTFGKRFLKSKQYPYAQIYEYSKLCLLLFSYELHRQLCQMGKSHQIFVNVADPGVVQTNIMREVPASLSWVAFFVLKRLRLLESSECGNDSIIDAALTPP