Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95476.t1 | XP_003614127.2 | 96.2 | 185 | 7 | 0 | 1 | 185 | 480 | 664 | 2.40E-97 | 364.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95476.t1 | Q5UNY4 | 38.9 | 162 | 95 | 2 | 1 | 160 | 330 | 489 | 1.4e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95476.t1 | G7JY31 | 96.2 | 185 | 7 | 0 | 1 | 185 | 480 | 664 | 1.7e-97 | 364.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene95476 | -0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene049281 | MS.gene95476 | 0.813159 | 2.95E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene95476 | -0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene049483 | MS.gene95476 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene95476 | -0.828702 | 7.76E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene95476 | -0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene95476 | -0.8198 | 9.60E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene95476 | 0.831632 | 1.50E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene95476 | -0.827561 | 1.46E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene95476 | -0.824664 | 7.14E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene95476 | 0.82856 | 8.40E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene95476 | -0.801228 | 9.94E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene95476 | 0.833609 | 4.83E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene95476 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene95476 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene051564 | MS.gene95476 | -0.802648 | 5.08E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene95476 | 0.805583 | 1.24E-49 | -1.69E-46 |
| MS.gene053069 | MS.gene95476 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene95476 | 0.846727 | 1.81E-59 | -1.69E-46 |
| MS.gene053549 | MS.gene95476 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene95476 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene054616 | MS.gene95476 | 0.811023 | 8.62E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene95476 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene95476 | 0.829687 | 4.48E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene95476 | 0.934608 | 3.10E-96 | -1.69E-46 |
| MS.gene054954 | MS.gene95476 | -0.800731 | 1.26E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene95476 | 0.825154 | 5.47E-54 | -1.69E-46 |
| MS.gene055202 | MS.gene95476 | 0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene95476 | -0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene95476 | -0.800259 | 1.57E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene95476 | -0.801912 | 7.20E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene95476 | -0.82739 | 1.61E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene95476 | 0.813184 | 2.91E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene95476 | 0.802659 | 5.05E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene95476 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene95476 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene058268 | MS.gene95476 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene058493 | MS.gene95476 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene95476 | -0.83517 | 1.96E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene95476 | -0.80852 | 2.98E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene95476 | -0.812957 | 3.26E-51 | -1.69E-46 |
| MS.gene059916 | MS.gene95476 | 0.811615 | 6.41E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene95476 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene060602 | MS.gene95476 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene95476 | -0.805099 | 1.57E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene95476 | -0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene06077 | MS.gene95476 | -0.826033 | 3.39E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95476.t1 | MTR_5g045160 | 96.216 | 185 | 7 | 0 | 1 | 185 | 480 | 664 | 1.39e-127 | 373 |
| MS.gene95476.t1 | MTR_5g045130 | 88.108 | 185 | 22 | 0 | 1 | 185 | 315 | 499 | 2.98e-117 | 342 |
| MS.gene95476.t1 | MTR_3g103410 | 86.224 | 196 | 16 | 1 | 1 | 185 | 512 | 707 | 1.25e-114 | 341 |
| MS.gene95476.t1 | MTR_6g445440 | 87.027 | 185 | 24 | 0 | 1 | 185 | 452 | 636 | 1.39e-113 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95476.t1 | AT5G13210 | 63.415 | 205 | 55 | 1 | 1 | 185 | 469 | 673 | 4.11e-88 | 272 |
| MS.gene95476.t1 | AT5G43400 | 62.201 | 209 | 54 | 2 | 1 | 185 | 448 | 655 | 2.44e-84 | 261 |
| MS.gene95476.t1 | AT5G43390 | 62.679 | 209 | 53 | 2 | 1 | 185 | 436 | 643 | 2.91e-84 | 261 |
| MS.gene95476.t1 | AT3G24780 | 59.016 | 183 | 42 | 1 | 1 | 150 | 521 | 703 | 4.64e-67 | 218 |
Find 66 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCTGCTGACATTGTTCT+TGG | 0.284328 | 5.2:-35432665 | MS.gene95476:CDS |
| ATATGCGATCAAACACCTTC+TGG | 0.312936 | 5.2:+35432941 | None:intergenic |
| ATCAAGCGTCTGCAAACTCT+TGG | 0.365158 | 5.2:-35432840 | MS.gene95476:CDS |
| GCAGCTTCCATGGCTTCTAC+AGG | 0.387857 | 5.2:+35432622 | None:intergenic |
| CCTAGTGATTGCTTGGTAAT+CGG | 0.388642 | 5.2:+35432813 | None:intergenic |
| GCCATGGAAGCTGCCATCGC+TGG | 0.399741 | 5.2:-35432613 | MS.gene95476:CDS |
| GTGTGTAGCATTGGGGTTGT+TGG | 0.401844 | 5.2:-35433106 | MS.gene95476:CDS |
| GTTTGTGAGGAACATGGATT+GGG | 0.401906 | 5.2:-35432980 | MS.gene95476:CDS |
| GAAGGTGTTTGATCGCATAT+TGG | 0.405938 | 5.2:-35432938 | MS.gene95476:CDS |
| CTTTCTGAGTGGATGGCACC+GGG | 0.421088 | 5.2:+35432716 | None:intergenic |
| CACAACTAGTTTCTGATACT+CGG | 0.428515 | 5.2:+35432588 | None:intergenic |
| TATACTTCCTAGTGATTGCT+TGG | 0.431774 | 5.2:+35432806 | None:intergenic |
| AGTTTGTGAGGAACATGGAT+TGG | 0.432352 | 5.2:-35432981 | MS.gene95476:CDS |
| ATGGAGGTGTGTGTAGCATT+GGG | 0.432777 | 5.2:-35433114 | MS.gene95476:CDS |
| ACTAGGAAGTATAGAAAGAA+AGG | 0.441720 | 5.2:-35432796 | MS.gene95476:CDS |
| GCCAGCGATGGCAGCTTCCA+TGG | 0.443302 | 5.2:+35432612 | None:intergenic |
| GTTCCTCACAAACTTTGTCT+TGG | 0.445968 | 5.2:+35432990 | None:intergenic |
| ACAACTAGTTTCTGATACTC+GGG | 0.457651 | 5.2:+35432589 | None:intergenic |
| CCTTTCTGAGTGGATGGCAC+CGG | 0.470831 | 5.2:+35432715 | None:intergenic |
| GCCACTCCTTTCTGAGTGGA+TGG | 0.483109 | 5.2:+35432709 | None:intergenic |
| GCCTCAGCTTCATGTGATTG+AGG | 0.484160 | 5.2:-35433028 | MS.gene95476:CDS |
| TATGGAGGTGTGTGTAGCAT+TGG | 0.484283 | 5.2:-35433115 | MS.gene95476:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 5.2:-35432891 | MS.gene95476:CDS |
| AAGTATAGAAAGAAAGGGTA+TGG | 0.487906 | 5.2:-35432790 | MS.gene95476:CDS |
| GTAATAACCTTCCCTTTCCA+TGG | 0.491644 | 5.2:+35433063 | None:intergenic |
| GTATCAGAAACTAGTTGTGC+TGG | 0.495109 | 5.2:-35432584 | MS.gene95476:CDS |
| AATGCTACACACACCTCCAT+AGG | 0.501130 | 5.2:+35433117 | None:intergenic |
| GGAAGGTTATTACTTTCAGC+AGG | 0.508350 | 5.2:-35433053 | MS.gene95476:CDS |
| CCTCAGCTTCATGTGATTGA+GGG | 0.511737 | 5.2:-35433027 | MS.gene95476:CDS |
| CTGATACTCGGGGCCAGCGA+TGG | 0.513732 | 5.2:+35432600 | None:intergenic |
| CACTCAGAAAGGAGTGGCAC+TGG | 0.513905 | 5.2:-35432704 | MS.gene95476:CDS |
| TCAAGCGTCTGCAAACTCTT+GGG | 0.514244 | 5.2:-35432839 | MS.gene95476:CDS |
| CAGCTTCCATGGCTTCTACA+GGG | 0.521562 | 5.2:+35432623 | None:intergenic |
| ATATTGGATGTGGCTGTCAA+TGG | 0.529469 | 5.2:-35432922 | MS.gene95476:CDS |
| AAAGGAGTGGCACTGGTAAG+TGG | 0.549583 | 5.2:-35432697 | MS.gene95476:CDS |
| GACAAAGTTTGTGAGGAACA+TGG | 0.551414 | 5.2:-35432986 | MS.gene95476:CDS |
| TGAACGAGGAACCATGGAAA+GGG | 0.554458 | 5.2:-35433074 | MS.gene95476:CDS |
| TATTGGATGTGGCTGTCAAT+GGG | 0.560043 | 5.2:-35432921 | MS.gene95476:CDS |
| CCGATTACCAAGCAATCACT+AGG | 0.565104 | 5.2:-35432813 | MS.gene95476:CDS |
| CCCTCAATCACATGAAGCTG+AGG | 0.568852 | 5.2:+35433027 | None:intergenic |
| CCGGTGCCATCCACTCAGAA+AGG | 0.571959 | 5.2:-35432715 | MS.gene95476:CDS |
| GTTTGATCGCATATTGGATG+TGG | 0.574432 | 5.2:-35432932 | MS.gene95476:CDS |
| CTAGGAAGTATAGAAAGAAA+GGG | 0.575902 | 5.2:-35432795 | MS.gene95476:CDS |
| CAGTGCCACTCCTTTCTGAG+TGG | 0.580391 | 5.2:+35432705 | None:intergenic |
| GAGAGACTCGAAGGCCACCC+CGG | 0.584902 | 5.2:-35432734 | MS.gene95476:CDS |
| TTGGAATCTGAGAGACTCGA+AGG | 0.585593 | 5.2:-35432743 | MS.gene95476:CDS |
| GATCTTTGTCTTTAGTGACA+TGG | 0.587705 | 5.2:-35432869 | MS.gene95476:CDS |
| TTGAACGAGGAACCATGGAA+AGG | 0.588133 | 5.2:-35433075 | MS.gene95476:CDS |
| TATAAGCCCTGTAGAAGCCA+TGG | 0.596604 | 5.2:-35432629 | MS.gene95476:CDS |
| CTCAGCTTCATGTGATTGAG+GGG | 0.599232 | 5.2:-35433026 | MS.gene95476:CDS |
| ACATTGTTCTTGGATAATGA+AGG | 0.599605 | 5.2:-35432655 | MS.gene95476:CDS |
| TTTGTGAGGAACATGGATTG+GGG | 0.600633 | 5.2:-35432979 | MS.gene95476:CDS |
| CTGAATTGAACGAGGAACCA+TGG | 0.603342 | 5.2:-35433080 | MS.gene95476:CDS |
| CTGAGTGGATGGCACCGGGG+TGG | 0.616153 | 5.2:+35432720 | None:intergenic |
| GGCTGTCAATGGGAATCTCA+AGG | 0.621591 | 5.2:-35432911 | MS.gene95476:CDS |
| TTGTGAGGAACATGGATTGG+GGG | 0.639683 | 5.2:-35432978 | MS.gene95476:CDS |
| AGTCCAAGACAAAGTTTGTG+AGG | 0.642724 | 5.2:-35432993 | MS.gene95476:CDS |
| TGGAGGTGTGTGTAGCATTG+GGG | 0.646940 | 5.2:-35433113 | MS.gene95476:CDS |
| CGAGGAACCATGGAAAGGGA+AGG | 0.654288 | 5.2:-35433070 | MS.gene95476:CDS |
| GATGAACACTGATTTCCAGA+AGG | 0.669878 | 5.2:-35432956 | MS.gene95476:CDS |
| TCAGCTTCATGTGATTGAGG+GGG | 0.673206 | 5.2:-35433025 | MS.gene95476:CDS |
| GCCATCCACTCAGAAAGGAG+TGG | 0.675952 | 5.2:-35432710 | MS.gene95476:CDS |
| TTTCTGAGTGGATGGCACCG+GGG | 0.698885 | 5.2:+35432717 | None:intergenic |
| CAACTAGTTTCTGATACTCG+GGG | 0.701259 | 5.2:+35432590 | None:intergenic |
| GTTGGTGTCTGAATTGAACG+AGG | 0.758083 | 5.2:-35433088 | MS.gene95476:CDS |
| TGTCAATGGGAATCTCAAGG+AGG | 0.758838 | 5.2:-35432908 | MS.gene95476:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGTATAGAAAGAAAGGGTA+TGG | - | chr5.2:35432903-35432922 | MS.gene95476:CDS | 30.0% | |
| ACATTGTTCTTGGATAATGA+AGG | - | chr5.2:35433038-35433057 | MS.gene95476:CDS | 30.0% | |
| AGATTCCAAAAAACTATCTG+AGG | + | chr5.2:35432939-35432958 | None:intergenic | 30.0% | |
| ! | ACTAGGAAGTATAGAAAGAA+AGG | - | chr5.2:35432897-35432916 | MS.gene95476:CDS | 30.0% |
| ! | CTAGGAAGTATAGAAAGAAA+GGG | - | chr5.2:35432898-35432917 | MS.gene95476:CDS | 30.0% |
| GATCTTTGTCTTTAGTGACA+TGG | - | chr5.2:35432824-35432843 | MS.gene95476:CDS | 35.0% | |
| TATACTTCCTAGTGATTGCT+TGG | + | chr5.2:35432890-35432909 | None:intergenic | 35.0% | |
| ! | ACAACTAGTTTCTGATACTC+GGG | + | chr5.2:35433107-35433126 | None:intergenic | 35.0% |
| ! | CACAACTAGTTTCTGATACT+CGG | + | chr5.2:35433108-35433127 | None:intergenic | 35.0% |
| AGGAGGATCAGATGATTAAG+AGG | - | chr5.2:35432802-35432821 | MS.gene95476:CDS | 40.0% | |
| AGTCCAAGACAAAGTTTGTG+AGG | - | chr5.2:35432700-35432719 | MS.gene95476:CDS | 40.0% | |
| AGTTTGTGAGGAACATGGAT+TGG | - | chr5.2:35432712-35432731 | MS.gene95476:CDS | 40.0% | |
| ATATGCGATCAAACACCTTC+TGG | + | chr5.2:35432755-35432774 | None:intergenic | 40.0% | |
| ATATTGGATGTGGCTGTCAA+TGG | - | chr5.2:35432771-35432790 | MS.gene95476:CDS | 40.0% | |
| GAATCTGCTGACATTGTTCT+TGG | - | chr5.2:35433028-35433047 | MS.gene95476:CDS | 40.0% | |
| GACAAAGTTTGTGAGGAACA+TGG | - | chr5.2:35432707-35432726 | MS.gene95476:CDS | 40.0% | |
| GGAAGGTTATTACTTTCAGC+AGG | - | chr5.2:35432640-35432659 | MS.gene95476:CDS | 40.0% | |
| GTAATAACCTTCCCTTTCCA+TGG | + | chr5.2:35432633-35432652 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | chr5.2:35433109-35433128 | MS.gene95476:CDS | 40.0% | |
| GTTCCTCACAAACTTTGTCT+TGG | + | chr5.2:35432706-35432725 | None:intergenic | 40.0% | |
| GTTTGATCGCATATTGGATG+TGG | - | chr5.2:35432761-35432780 | MS.gene95476:CDS | 40.0% | |
| GTTTGTGAGGAACATGGATT+GGG | - | chr5.2:35432713-35432732 | MS.gene95476:CDS | 40.0% | |
| TATTGGATGTGGCTGTCAAT+GGG | - | chr5.2:35432772-35432791 | MS.gene95476:CDS | 40.0% | |
| ! | CAACTAGTTTCTGATACTCG+GGG | + | chr5.2:35433106-35433125 | None:intergenic | 40.0% |
| ! | CCTAGTGATTGCTTGGTAAT+CGG | + | chr5.2:35432883-35432902 | None:intergenic | 40.0% |
| ! | TTTGTGAGGAACATGGATTG+GGG | - | chr5.2:35432714-35432733 | MS.gene95476:CDS | 40.0% |
| !! | GAAGGTGTTTGATCGCATAT+TGG | - | chr5.2:35432755-35432774 | MS.gene95476:CDS | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | chr5.2:35432737-35432756 | MS.gene95476:CDS | 40.0% |
| !!! | CTGTGCCTCAGATAGTTTTT+TGG | - | chr5.2:35432931-35432950 | MS.gene95476:CDS | 40.0% |
| ATCAAGCGTCTGCAAACTCT+TGG | - | chr5.2:35432853-35432872 | MS.gene95476:CDS | 45.0% | |
| CCGATTACCAAGCAATCACT+AGG | - | chr5.2:35432880-35432899 | MS.gene95476:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTGA+GGG | - | chr5.2:35432666-35432685 | MS.gene95476:CDS | 45.0% | |
| CTCAGCTTCATGTGATTGAG+GGG | - | chr5.2:35432667-35432686 | MS.gene95476:CDS | 45.0% | |
| CTGAATTGAACGAGGAACCA+TGG | - | chr5.2:35432613-35432632 | MS.gene95476:CDS | 45.0% | |
| TATAAGCCCTGTAGAAGCCA+TGG | - | chr5.2:35433064-35433083 | MS.gene95476:CDS | 45.0% | |
| TCAAGCGTCTGCAAACTCTT+GGG | - | chr5.2:35432854-35432873 | MS.gene95476:CDS | 45.0% | |
| TCAGCTTCATGTGATTGAGG+GGG | - | chr5.2:35432668-35432687 | MS.gene95476:CDS | 45.0% | |
| TGAACGAGGAACCATGGAAA+GGG | - | chr5.2:35432619-35432638 | MS.gene95476:CDS | 45.0% | |
| TGTCAATGGGAATCTCAAGG+AGG | - | chr5.2:35432785-35432804 | MS.gene95476:CDS | 45.0% | |
| TTGAACGAGGAACCATGGAA+AGG | - | chr5.2:35432618-35432637 | MS.gene95476:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+AGG | - | chr5.2:35432950-35432969 | MS.gene95476:CDS | 45.0% | |
| ! | ATGGAGGTGTGTGTAGCATT+GGG | - | chr5.2:35432579-35432598 | MS.gene95476:CDS | 45.0% |
| ! | GTTGGTGTCTGAATTGAACG+AGG | - | chr5.2:35432605-35432624 | MS.gene95476:CDS | 45.0% |
| !! | TTGTGAGGAACATGGATTGG+GGG | - | chr5.2:35432715-35432734 | MS.gene95476:CDS | 45.0% |
| CAGCTTCCATGGCTTCTACA+GGG | + | chr5.2:35433073-35433092 | None:intergenic | 50.0% | |
| CCCTCAATCACATGAAGCTG+AGG | + | chr5.2:35432669-35432688 | None:intergenic | 50.0% | |
| GCCTCAGCTTCATGTGATTG+AGG | - | chr5.2:35432665-35432684 | MS.gene95476:CDS | 50.0% | |
| GGCTGTCAATGGGAATCTCA+AGG | - | chr5.2:35432782-35432801 | MS.gene95476:CDS | 50.0% | |
| ! | GTGTGTAGCATTGGGGTTGT+TGG | - | chr5.2:35432587-35432606 | MS.gene95476:CDS | 50.0% |
| ! | TGGAGGTGTGTGTAGCATTG+GGG | - | chr5.2:35432580-35432599 | MS.gene95476:CDS | 50.0% |
| !! | AAAGGAGTGGCACTGGTAAG+TGG | - | chr5.2:35432996-35433015 | MS.gene95476:CDS | 50.0% |
| CACTCAGAAAGGAGTGGCAC+TGG | - | chr5.2:35432989-35433008 | MS.gene95476:CDS | 55.0% | |
| CCTTTCTGAGTGGATGGCAC+CGG | + | chr5.2:35432981-35433000 | None:intergenic | 55.0% | |
| CGAGGAACCATGGAAAGGGA+AGG | - | chr5.2:35432623-35432642 | MS.gene95476:CDS | 55.0% | |
| CTTTCTGAGTGGATGGCACC+GGG | + | chr5.2:35432980-35432999 | None:intergenic | 55.0% | |
| GCAGCTTCCATGGCTTCTAC+AGG | + | chr5.2:35433074-35433093 | None:intergenic | 55.0% | |
| GCCACTCCTTTCTGAGTGGA+TGG | + | chr5.2:35432987-35433006 | None:intergenic | 55.0% | |
| GCCATCCACTCAGAAAGGAG+TGG | - | chr5.2:35432983-35433002 | MS.gene95476:CDS | 55.0% | |
| TTTCTGAGTGGATGGCACCG+GGG | + | chr5.2:35432979-35432998 | None:intergenic | 55.0% | |
| ! | CAGTGCCACTCCTTTCTGAG+TGG | + | chr5.2:35432991-35433010 | None:intergenic | 55.0% |
| !! | CCGGTGCCATCCACTCAGAA+AGG | - | chr5.2:35432978-35432997 | MS.gene95476:CDS | 60.0% |
| CTGATACTCGGGGCCAGCGA+TGG | + | chr5.2:35433096-35433115 | None:intergenic | 65.0% | |
| GAGAGACTCGAAGGCCACCC+CGG | - | chr5.2:35432959-35432978 | MS.gene95476:CDS | 65.0% | |
| GCCAGCGATGGCAGCTTCCA+TGG | + | chr5.2:35433084-35433103 | None:intergenic | 65.0% | |
| GCCATGGAAGCTGCCATCGC+TGG | - | chr5.2:35433080-35433099 | MS.gene95476:CDS | 65.0% | |
| ! | CTGAGTGGATGGCACCGGGG+TGG | + | chr5.2:35432976-35432995 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 35432579 | 35433136 | 35432579 | ID=MS.gene95476 |
| chr5.2 | mRNA | 35432579 | 35433136 | 35432579 | ID=MS.gene95476.t1;Parent=MS.gene95476 |
| chr5.2 | exon | 35432579 | 35433136 | 35432579 | ID=MS.gene95476.t1.exon1;Parent=MS.gene95476.t1 |
| chr5.2 | CDS | 35432579 | 35433136 | 35432579 | ID=cds.MS.gene95476.t1;Parent=MS.gene95476.t1 |
| Gene Sequence |
| Protein sequence |
