Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013940.01.T03 | ANS11034.1 | 100 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 1.87E-19 | 82 |
| MsG0380013940.01.T02 | QRG30656.1 | 97.872 | 47 | 1 | 0 | 1 | 47 | 1 | 47 | 2.50E-24 | 94.7 |
| MsG0380013940.01.T01 | QBS31917.1 | 98.795 | 83 | 1 | 0 | 1 | 83 | 11 | 93 | 3.60E-52 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013940.01.T01 | A0ZZ52 | 98.795 | 83 | 1 | 0 | 1 | 83 | 1 | 83 | 1.03E-54 | 166 |
| MsG0380013940.01.T03 | A0A351 | 100 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 3.70E-22 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013940.01.T01 | A0A822IN45 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 2.74e-52 | 167 |
| MsG0380013940.01.T02 | A0A890CFG9 | 97.872 | 47 | 1 | 0 | 1 | 47 | 1 | 47 | 1.19e-24 | 94.7 |
| MsG0380013940.01.T03 | A0A059PT55 | 100.000 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 1.42e-19 | 81.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380013940.01 | 0.871914 | 4.751659e-67 | 1.949657e-63 |
| MsG0080048059.01 | MsG0380013940.01 | 0.833482 | 5.200513e-56 | 5.996733e-53 |
| MsG0080048302.01 | MsG0380013940.01 | -0.822356 | 2.475294e-53 | 2.067068e-50 |
| MsG0080048313.01 | MsG0380013940.01 | 0.810223 | 1.282337e-50 | 7.685759e-48 |
| MsG0080048560.01 | MsG0380013940.01 | 0.844731 | 6.306021e-59 | 1.027515e-55 |
| MsG0080048690.01 | MsG0380013940.01 | 0.867333 | 1.478836e-65 | 5.144340e-62 |
| MsG0080048691.01 | MsG0380013940.01 | 0.866460 | 2.804838e-65 | 9.460567e-62 |
| MsG0080048692.01 | MsG0380013940.01 | 0.945866 | 1.365392e-104 | 2.154167e-99 |
| MsG0080048693.01 | MsG0380013940.01 | 0.913706 | 4.507852e-84 | 1.080136e-79 |
| MsG0080048694.01 | MsG0380013940.01 | 0.916414 | 1.834254e-85 | 5.037270e-81 |
| MsG0080048695.01 | MsG0380013940.01 | 0.915813 | 3.764376e-85 | 1.002753e-80 |
| MsG0080048697.01 | MsG0380013940.01 | 0.920427 | 1.298353e-87 | 4.400520e-83 |
| MsG0080048698.01 | MsG0380013940.01 | 0.878300 | 3.138601e-69 | 1.630240e-65 |
| MsG0080048699.01 | MsG0380013940.01 | 0.901019 | 4.088202e-78 | 5.417896e-74 |
| MsG0080048754.01 | MsG0380013940.01 | 0.800112 | 1.678724e-48 | 7.752153e-46 |
| MsG0080048800.01 | MsG0380013940.01 | 0.870196 | 1.752136e-66 | 6.756690e-63 |
| MsG0080048813.01 | MsG0380013940.01 | 0.815839 | 7.524735e-52 | 5.245043e-49 |
| MsG0080048948.01 | MsG0380013940.01 | 0.828111 | 1.077697e-54 | 1.061100e-51 |
| MsG0080048978.01 | MsG0380013940.01 | 0.802870 | 4.569138e-49 | 2.262986e-46 |
| MsG0080048986.01 | MsG0380013940.01 | 0.811093 | 8.317592e-51 | 5.102080e-48 |
| MsG0080049019.01 | MsG0380013940.01 | 0.814342 | 1.617407e-51 | 1.082494e-48 |
| MsG0080049023.01 | MsG0380013940.01 | 0.806483 | 8.046323e-50 | 4.372427e-47 |
| MsG0080049038.01 | MsG0380013940.01 | 0.828082 | 1.095532e-54 | 1.077708e-51 |
| MsG0080049066.01 | MsG0380013940.01 | 0.818026 | 2.429911e-52 | 1.798280e-49 |
| MsG0080049076.01 | MsG0380013940.01 | 0.949356 | 1.502174e-107 | 2.970388e-102 |
| MsG0080049133.01 | MsG0380013940.01 | 0.809467 | 1.865157e-50 | 1.095936e-47 |
| MsG0180000337.01 | MsG0380013940.01 | -0.806566 | 7.731672e-50 | 4.210257e-47 |
| MsG0180000467.01 | MsG0380013940.01 | 0.814431 | 1.545895e-51 | 1.037116e-48 |
| MsG0180000719.01 | MsG0380013940.01 | 0.820462 | 6.774319e-53 | 5.363812e-50 |
| MsG0180001072.01 | MsG0380013940.01 | 0.855175 | 7.523182e-62 | 1.721550e-58 |
| MsG0180001507.01 | MsG0380013940.01 | 0.850080 | 2.139443e-60 | 4.142039e-57 |
| MsG0180001919.01 | MsG0380013940.01 | 0.802343 | 5.867460e-49 | 2.867357e-46 |
| MsG0180001925.01 | MsG0380013940.01 | 0.910785 | 1.270022e-82 | 2.637370e-78 |
| MsG0180002099.01 | MsG0380013940.01 | 0.858130 | 1.017488e-62 | 2.570069e-59 |
| MsG0180002214.01 | MsG0380013940.01 | 0.889751 | 1.830192e-73 | 1.495810e-69 |
| MsG0180002425.01 | MsG0380013940.01 | 0.820373 | 7.099609e-53 | 5.607643e-50 |
| MsG0180002426.01 | MsG0380013940.01 | 0.850582 | 1.546690e-60 | 3.043998e-57 |
| MsG0180002439.01 | MsG0380013940.01 | 0.901081 | 3.840532e-78 | 5.105894e-74 |
| MsG0180002546.01 | MsG0380013940.01 | 0.900140 | 9.867338e-78 | 1.258789e-73 |
| MsG0180003757.01 | MsG0380013940.01 | 0.857719 | 1.347222e-62 | 3.356686e-59 |
| MsG0180003779.01 | MsG0380013940.01 | 0.826359 | 2.833360e-54 | 2.651271e-51 |
| MsG0180003898.01 | MsG0380013940.01 | -0.813881 | 2.044349e-51 | 1.351214e-48 |
| MsG0180003985.01 | MsG0380013940.01 | 0.827754 | 1.313869e-54 | 1.280053e-51 |
| MsG0180004124.01 | MsG0380013940.01 | 0.836858 | 7.314628e-57 | 9.335242e-54 |
| MsG0180004125.01 | MsG0380013940.01 | 0.833050 | 6.663018e-56 | 7.585358e-53 |
| MsG0180004177.01 | MsG0380013940.01 | 0.805071 | 1.593353e-49 | 8.350763e-47 |
| MsG0180004226.01 | MsG0380013940.01 | 0.838618 | 2.584156e-57 | 3.480399e-54 |
| MsG0180004300.01 | MsG0380013940.01 | -0.825511 | 4.505322e-54 | 4.114855e-51 |
| MsG0180004301.01 | MsG0380013940.01 | 0.828025 | 1.130638e-54 | 1.110444e-51 |
| MsG0180004322.01 | MsG0380013940.01 | 0.810128 | 1.344796e-50 | 8.040385e-48 |
| MsG0180004435.01 | MsG0380013940.01 | 0.805809 | 1.115780e-49 | 5.959741e-47 |
| MsG0180004502.01 | MsG0380013940.01 | 0.820256 | 7.552429e-53 | 5.945768e-50 |
| MsG0180004506.01 | MsG0380013940.01 | 0.827263 | 1.722870e-54 | 1.654926e-51 |
| MsG0180004507.01 | MsG0380013940.01 | 0.823845 | 1.112232e-53 | 9.688049e-51 |
| MsG0180004553.01 | MsG0380013940.01 | 0.836739 | 7.841395e-57 | 9.971989e-54 |
| MsG0180004586.01 | MsG0380013940.01 | 0.856516 | 3.051398e-62 | 7.303205e-59 |
| MsG0180004761.01 | MsG0380013940.01 | 0.876130 | 1.782877e-68 | 8.545246e-65 |
| MsG0180004957.01 | MsG0380013940.01 | 0.806614 | 7.550198e-50 | 4.116465e-47 |
| MsG0180005369.01 | MsG0380013940.01 | 0.816245 | 6.108462e-52 | 4.305695e-49 |
| MsG0180005791.01 | MsG0380013940.01 | 0.864382 | 1.265863e-64 | 3.966758e-61 |
| MsG0180005817.01 | MsG0380013940.01 | 0.858697 | 6.893329e-63 | 1.774741e-59 |
| MsG0180005848.01 | MsG0380013940.01 | 0.803674 | 3.114143e-49 | 1.574393e-46 |
| MsG0180006212.01 | MsG0380013940.01 | 0.858398 | 8.465820e-63 | 2.157731e-59 |
| MsG0180006226.01 | MsG0380013940.01 | 0.813154 | 2.955593e-51 | 1.915110e-48 |
| MsG0180006227.01 | MsG0380013940.01 | 0.843848 | 1.088308e-58 | 1.724952e-55 |
| MsG0280006336.01 | MsG0380013940.01 | 0.815326 | 9.789861e-52 | 6.728923e-49 |
| MsG0280006381.01 | MsG0380013940.01 | 0.804053 | 2.598439e-49 | 1.326618e-46 |
| MsG0280006452.01 | MsG0380013940.01 | 0.829153 | 6.036282e-55 | 6.126511e-52 |
| MsG0280010695.01 | MsG0380013940.01 | 0.871604 | 6.023223e-67 | 2.444599e-63 |
| MsG0280010780.01 | MsG0380013940.01 | 0.873944 | 9.928811e-68 | 4.387540e-64 |
| MsG0280011299.01 | MsG0380013940.01 | 0.825628 | 4.224941e-54 | 3.872017e-51 |
| MsG0280011301.01 | MsG0380013940.01 | 0.858862 | 6.153444e-63 | 1.593345e-59 |
| MsG0280011475.01 | MsG0380013940.01 | 0.808128 | 3.606668e-50 | 2.045457e-47 |
| MsG0380012065.01 | MsG0380013940.01 | 0.808512 | 2.985858e-50 | 1.710569e-47 |
| MsG0380012281.01 | MsG0380013940.01 | 0.843000 | 1.834043e-58 | 2.829653e-55 |
| MsG0380013114.01 | MsG0380013940.01 | 0.836015 | 1.198422e-56 | 1.491101e-53 |
| MsG0380013448.01 | MsG0380013940.01 | 0.907015 | 7.992373e-81 | 1.389981e-76 |
| MsG0380013473.01 | MsG0380013940.01 | 0.862298 | 5.597335e-64 | 1.631078e-60 |
| MsG0380013506.01 | MsG0380013940.01 | 0.814007 | 1.917725e-51 | 1.271838e-48 |
| MsG0380013888.01 | MsG0380013940.01 | 0.885071 | 1.114724e-71 | 7.542897e-68 |
| MsG0380013890.01 | MsG0380013940.01 | 0.874594 | 5.978711e-68 | 2.706919e-64 |
| MsG0380013891.01 | MsG0380013940.01 | 0.800655 | 1.301467e-48 | 6.093541e-46 |
| MsG0380013892.01 | MsG0380013940.01 | 0.904749 | 8.865082e-80 | 1.390697e-75 |
| MsG0380013914.01 | MsG0380013940.01 | 0.801496 | 8.760891e-49 | 4.190105e-46 |
| MsG0380013917.01 | MsG0380013940.01 | 0.844951 | 5.499711e-59 | 9.023988e-56 |
| MsG0380013918.01 | MsG0380013940.01 | 0.831295 | 1.809726e-55 | 1.955470e-52 |
| MsG0380013921.01 | MsG0380013940.01 | 0.905263 | 5.161530e-80 | 8.279927e-76 |
| MsG0380013923.01 | MsG0380013940.01 | 0.816825 | 4.528309e-52 | 3.242832e-49 |
| MsG0380013925.01 | MsG0380013940.01 | 0.850973 | 1.200928e-60 | 2.394143e-57 |
| MsG0380013926.01 | MsG0380013940.01 | 0.905162 | 5.741761e-80 | 9.171108e-76 |
| MsG0380013928.01 | MsG0380013940.01 | 0.914695 | 1.417573e-84 | 3.569806e-80 |
| MsG0380013929.01 | MsG0380013940.01 | 0.869745 | 2.459873e-66 | 9.331087e-63 |
| MsG0380013931.01 | MsG0380013940.01 | 0.876071 | 1.868745e-68 | 8.935872e-65 |
| MsG0380013934.01 | MsG0380013940.01 | 0.841834 | 3.737289e-58 | 5.559484e-55 |
| MsG0380013935.01 | MsG0380013940.01 | 0.841674 | 4.118637e-58 | 6.096032e-55 |
| MsG0380013940.01 | MsG0380013941.01 | 0.897861 | 9.319013e-77 | 1.073456e-72 |
| MsG0380013940.01 | MsG0380013942.01 | 0.903953 | 2.033302e-79 | 3.075457e-75 |
| MsG0380013940.01 | MsG0380013943.01 | 0.976069 | 3.993486e-141 | 6.479432e-135 |
| MsG0380013940.01 | MsG0380013944.01 | 0.850762 | 1.376983e-60 | 2.726105e-57 |
| MsG0380013940.01 | MsG0380013945.01 | 0.959494 | 1.668917e-117 | 6.713466e-112 |
| MsG0380013940.01 | MsG0380013951.01 | 0.903855 | 2.251713e-79 | 3.393355e-75 |
| MsG0380013940.01 | MsG0380013952.01 | 0.866352 | 3.036121e-65 | 1.020216e-61 |
| MsG0380013940.01 | MsG0380013953.01 | 0.964036 | 7.999146e-123 | 4.581331e-117 |
| MsG0380013940.01 | MsG0380013954.01 | 0.915042 | 9.408048e-85 | 2.410929e-80 |
| MsG0380013940.01 | MsG0380013956.01 | 0.920993 | 6.323655e-88 | 2.206536e-83 |
| MsG0380013940.01 | MsG0380013957.01 | 0.962212 | 1.312026e-120 | 6.435436e-115 |
| MsG0380013940.01 | MsG0380013961.01 | 0.876517 | 1.311204e-68 | 6.375833e-65 |
| MsG0380013940.01 | MsG0380013962.01 | 0.879195 | 1.518814e-69 | 8.160175e-66 |
| MsG0380013940.01 | MsG0380013966.01 | 0.949856 | 5.438066e-108 | 1.112533e-102 |
| MsG0380013940.01 | MsG0380013967.01 | 0.962414 | 7.536235e-121 | 3.764394e-115 |
| MsG0380013940.01 | MsG0380013968.01 | 0.901384 | 2.830997e-78 | 3.814771e-74 |
| MsG0380013940.01 | MsG0380013969.01 | 0.866597 | 2.537837e-65 | 8.602242e-62 |
| MsG0380013940.01 | MsG0380013971.01 | 0.947519 | 5.748079e-106 | 1.008700e-100 |
| MsG0380013940.01 | MsG0380013972.01 | 0.825326 | 4.981328e-54 | 4.526212e-51 |
| MsG0380013940.01 | MsG0380013975.01 | 0.924658 | 5.245971e-90 | 2.241581e-85 |
| MsG0380013940.01 | MsG0380013977.01 | 0.960614 | 9.326837e-119 | 4.046356e-113 |
| MsG0380013940.01 | MsG0380013981.01 | 0.833695 | 4.601555e-56 | 5.339628e-53 |
| MsG0380013940.01 | MsG0380013983.01 | 0.817479 | 3.227992e-52 | 2.353514e-49 |
| MsG0380013940.01 | MsG0380013984.01 | 0.838573 | 2.653394e-57 | 3.568744e-54 |
| MsG0380013940.01 | MsG0380013985.01 | 0.838175 | 3.361119e-57 | 4.465505e-54 |
| MsG0380013940.01 | MsG0380013986.01 | 0.891991 | 2.394241e-74 | 2.146785e-70 |
| MsG0380013940.01 | MsG0380013995.01 | 0.803215 | 3.878024e-49 | 1.937619e-46 |
| MsG0380013940.01 | MsG0380013997.01 | 0.898510 | 4.943767e-77 | 5.860858e-73 |
| MsG0380013940.01 | MsG0380013999.01 | 0.885888 | 5.510608e-72 | 3.848518e-68 |
| MsG0380013940.01 | MsG0380014004.01 | 0.851951 | 6.348472e-61 | 1.305950e-57 |
| MsG0380013940.01 | MsG0380014005.01 | 0.955483 | 2.734618e-113 | 8.303121e-108 |
| MsG0380013940.01 | MsG0380014006.01 | 0.960541 | 1.128664e-118 | 4.868636e-113 |
| MsG0380013940.01 | MsG0380014008.01 | 0.813182 | 2.913919e-51 | 1.889555e-48 |
| MsG0380013940.01 | MsG0380014016.01 | 0.880448 | 5.445954e-70 | 3.070188e-66 |
| MsG0380013940.01 | MsG0380014017.01 | 0.911176 | 8.172923e-83 | 1.729765e-78 |
| MsG0380013940.01 | MsG0380014018.01 | 0.888225 | 7.129363e-73 | 5.474622e-69 |
| MsG0380013940.01 | MsG0380014020.01 | 0.912232 | 2.465632e-83 | 5.492692e-79 |
| MsG0380013940.01 | MsG0380014021.01 | 0.890882 | 6.590740e-74 | 5.644725e-70 |
| MsG0380013940.01 | MsG0380014023.01 | 0.927847 | 6.636721e-92 | 3.390056e-87 |
| MsG0380013940.01 | MsG0380014024.01 | 0.883899 | 3.035499e-71 | 1.960867e-67 |
| MsG0380013940.01 | MsG0380014026.01 | 0.914461 | 1.864929e-84 | 4.640327e-80 |
| MsG0380013940.01 | MsG0380014029.01 | 0.910074 | 2.810792e-82 | 5.640897e-78 |
| MsG0380013940.01 | MsG0380014031.01 | 0.840794 | 7.015412e-58 | 1.010426e-54 |
| MsG0380013940.01 | MsG0380014032.01 | 0.955695 | 1.674290e-113 | 5.169067e-108 |
| MsG0380013940.01 | MsG0380014033.01 | 0.941492 | 3.783601e-101 | 4.452477e-96 |
| MsG0380013940.01 | MsG0380014034.01 | 0.806154 | 9.440483e-50 | 5.087156e-47 |
| MsG0380013940.01 | MsG0380014039.01 | 0.853326 | 2.572370e-61 | 5.537685e-58 |
| MsG0380013940.01 | MsG0380014040.01 | 0.842117 | 3.145235e-58 | 4.721117e-55 |
| MsG0380013940.01 | MsG0380014050.01 | 0.807911 | 4.010091e-50 | 2.261130e-47 |
| MsG0380013940.01 | MsG0380014051.01 | 0.871969 | 4.556630e-67 | 1.873490e-63 |
| MsG0380013940.01 | MsG0380014054.01 | 0.827690 | 1.360786e-54 | 1.323294e-51 |
| MsG0380013940.01 | MsG0380014057.01 | 0.809645 | 1.707811e-50 | 1.008302e-47 |
| MsG0380013940.01 | MsG0380014129.01 | 0.825179 | 5.396843e-54 | 4.883419e-51 |
| MsG0380013940.01 | MsG0380014410.01 | -0.815655 | 8.270386e-52 | 5.736319e-49 |
| MsG0380013940.01 | MsG0380014642.01 | 0.803376 | 3.591306e-49 | 1.801770e-46 |
| MsG0380013940.01 | MsG0380014735.01 | 0.835632 | 1.498767e-56 | 1.843334e-53 |
| MsG0380013940.01 | MsG0380015115.01 | -0.826596 | 2.486995e-54 | 2.342731e-51 |
| MsG0380013940.01 | MsG0380015200.01 | 0.827643 | 1.397110e-54 | 1.356705e-51 |
| MsG0380013940.01 | MsG0380015201.01 | 0.846819 | 1.709512e-59 | 2.978877e-56 |
| MsG0380013940.01 | MsG0380015271.01 | 0.825145 | 5.497222e-54 | 4.969486e-51 |
| MsG0380013940.01 | MsG0380015348.01 | 0.876460 | 1.371958e-68 | 6.657969e-65 |
| MsG0380013940.01 | MsG0380015439.01 | 0.840501 | 8.372716e-58 | 1.195003e-54 |
| MsG0380013940.01 | MsG0380015619.01 | 0.809031 | 2.312802e-50 | 1.343221e-47 |
| MsG0380013940.01 | MsG0380015752.01 | 0.836442 | 9.338375e-57 | 1.176986e-53 |
| MsG0380013940.01 | MsG0380016008.01 | -0.823788 | 1.146772e-53 | 9.973366e-51 |
| MsG0380013940.01 | MsG0380016018.01 | -0.824904 | 6.269705e-54 | 5.628858e-51 |
| MsG0380013940.01 | MsG0380016241.01 | 0.820672 | 6.059359e-53 | 4.825394e-50 |
| MsG0380013940.01 | MsG0380016270.01 | -0.824543 | 7.625465e-54 | 6.775055e-51 |
| MsG0380013940.01 | MsG0380016424.01 | 0.823960 | 1.045141e-53 | 9.133157e-51 |
| MsG0380013940.01 | MsG0380016790.01 | 0.840974 | 6.291659e-58 | 9.112265e-55 |
| MsG0380013940.01 | MsG0380016835.01 | 0.832191 | 1.088141e-55 | 1.207316e-52 |
| MsG0380013940.01 | MsG0380016881.01 | 0.818775 | 1.643677e-52 | 1.241885e-49 |
| MsG0380013940.01 | MsG0380016889.01 | 0.826394 | 2.779713e-54 | 2.603631e-51 |
| MsG0380013940.01 | MsG0380016931.01 | 0.854673 | 1.052580e-61 | 2.369008e-58 |
| MsG0380013940.01 | MsG0380016934.01 | 0.829851 | 4.083490e-55 | 4.230845e-52 |
| MsG0380013940.01 | MsG0380016935.01 | 0.848881 | 4.621094e-60 | 8.603724e-57 |
| MsG0380013940.01 | MsG0380017007.01 | 0.883177 | 5.594988e-71 | 3.509215e-67 |
| MsG0380013940.01 | MsG0380017405.01 | 0.870611 | 1.280734e-66 | 5.012685e-63 |
| MsG0380013940.01 | MsG0380017406.01 | 0.862258 | 5.756594e-64 | 1.675274e-60 |
| MsG0380013940.01 | MsG0380017804.01 | 0.804603 | 1.995556e-49 | 1.033302e-46 |
| MsG0380013940.01 | MsG0380017812.01 | 0.819198 | 1.317034e-52 | 1.006729e-49 |
| MsG0380013940.01 | MsG0380017895.01 | 0.820323 | 7.288561e-53 | 5.748438e-50 |
| MsG0380013940.01 | MsG0380017904.01 | 0.808498 | 3.007050e-50 | 1.722079e-47 |
| MsG0380013940.01 | MsG0380017928.01 | 0.804592 | 2.006452e-49 | 1.038640e-46 |
| MsG0380013940.01 | MsG0380017935.01 | 0.821739 | 3.439583e-53 | 2.822055e-50 |
| MsG0380013940.01 | MsG0380017962.01 | 0.853584 | 2.169677e-61 | 4.711396e-58 |
| MsG0380013940.01 | MsG0380018026.01 | -0.819543 | 1.099232e-52 | 8.483841e-50 |
| MsG0380013940.01 | MsG0380018047.01 | 0.833930 | 4.018049e-56 | 4.696584e-53 |
| MsG0380013940.01 | MsG0380018072.01 | 0.809434 | 1.896178e-50 | 1.113181e-47 |
| MsG0380013940.01 | MsG0480018296.01 | 0.918656 | 1.189673e-86 | 3.664081e-82 |
| MsG0380013940.01 | MsG0480018494.01 | 0.801141 | 1.035779e-48 | 4.909749e-46 |
| MsG0380013940.01 | MsG0480018626.01 | 0.807604 | 4.661420e-50 | 2.607414e-47 |
| MsG0380013940.01 | MsG0480018628.01 | 0.841861 | 3.675433e-58 | 5.472342e-55 |
| MsG0380013940.01 | MsG0480018788.01 | 0.816616 | 5.043932e-52 | 3.591497e-49 |
| MsG0380013940.01 | MsG0480019028.01 | 0.865130 | 7.380646e-65 | 2.375101e-61 |
| MsG0380013940.01 | MsG0480019038.01 | -0.804809 | 1.807497e-49 | 9.409822e-47 |
| MsG0380013940.01 | MsG0480019668.01 | 0.805201 | 1.496797e-49 | 7.870725e-47 |
| MsG0380013940.01 | MsG0480019726.01 | -0.806476 | 8.075013e-50 | 4.387200e-47 |
| MsG0380013940.01 | MsG0480019861.01 | 0.832058 | 1.173834e-55 | 1.297406e-52 |
| MsG0380013940.01 | MsG0480019975.01 | 0.858423 | 8.320741e-63 | 2.122665e-59 |
| MsG0380013940.01 | MsG0480020051.01 | 0.809982 | 1.445794e-50 | 8.611771e-48 |
| MsG0380013940.01 | MsG0480020052.01 | 0.915573 | 5.012084e-85 | 1.318890e-80 |
| MsG0380013940.01 | MsG0480020957.01 | -0.824897 | 6.292597e-54 | 5.648321e-51 |
| MsG0380013940.01 | MsG0480020958.01 | -0.806943 | 6.434305e-50 | 3.537975e-47 |
| MsG0380013940.01 | MsG0480021054.01 | 0.849360 | 3.398663e-60 | 6.427548e-57 |
| MsG0380013940.01 | MsG0480021205.01 | 0.845460 | 4.006144e-59 | 6.680830e-56 |
| MsG0380013940.01 | MsG0480021327.01 | 0.878032 | 3.898061e-69 | 2.003909e-65 |
| MsG0380013940.01 | MsG0480021331.01 | 0.891679 | 3.187646e-74 | 2.823112e-70 |
| MsG0380013940.01 | MsG0480021476.01 | 0.859605 | 3.683433e-63 | 9.783166e-60 |
| MsG0380013940.01 | MsG0480021553.01 | -0.801056 | 1.078174e-48 | 5.099877e-46 |
| MsG0380013940.01 | MsG0480021912.01 | 0.886109 | 4.552245e-72 | 3.208249e-68 |
| MsG0380013940.01 | MsG0480022125.01 | -0.830392 | 3.014150e-55 | 3.171445e-52 |
| MsG0380013940.01 | MsG0480022459.01 | 0.818294 | 2.113188e-52 | 1.575489e-49 |
| MsG0380013940.01 | MsG0480022591.01 | 0.860433 | 2.072845e-63 | 5.665238e-60 |
| MsG0380013940.01 | MsG0480022765.01 | 0.828904 | 6.937337e-55 | 6.988909e-52 |
| MsG0380013940.01 | MsG0480022974.01 | -0.808431 | 3.107456e-50 | 1.776508e-47 |
| MsG0380013940.01 | MsG0480023152.01 | 0.828003 | 1.144797e-54 | 1.123594e-51 |
| MsG0380013940.01 | MsG0480023187.01 | 0.826945 | 2.052842e-54 | 1.953536e-51 |
| MsG0380013940.01 | MsG0480023217.01 | 0.826132 | 3.207626e-54 | 2.982135e-51 |
| MsG0380013940.01 | MsG0480023480.01 | 0.814996 | 1.159096e-51 | 7.895597e-49 |
| MsG0380013940.01 | MsG0480023481.01 | 0.826509 | 2.609380e-54 | 2.452057e-51 |
| MsG0380013940.01 | MsG0480023695.01 | 0.805417 | 1.348692e-49 | 7.131357e-47 |
| MsG0380013940.01 | MsG0580024278.01 | 0.818425 | 1.973499e-52 | 1.476815e-49 |
| MsG0380013940.01 | MsG0580024309.01 | 0.850333 | 1.817614e-60 | 3.548097e-57 |
| MsG0380013940.01 | MsG0580024442.01 | 0.808755 | 2.650209e-50 | 1.527885e-47 |
| MsG0380013940.01 | MsG0580024493.01 | 0.843986 | 9.997582e-59 | 1.591355e-55 |
| MsG0380013940.01 | MsG0580024570.01 | 0.888552 | 5.335070e-73 | 4.152368e-69 |
| MsG0380013940.01 | MsG0580024678.01 | 0.824657 | 7.168860e-54 | 6.390744e-51 |
| MsG0380013940.01 | MsG0580024999.01 | -0.819917 | 9.030196e-53 | 7.042751e-50 |
| MsG0380013940.01 | MsG0580025105.01 | 0.822402 | 2.414408e-53 | 2.018934e-50 |
| MsG0380013940.01 | MsG0580025486.01 | 0.812552 | 4.002865e-51 | 2.552815e-48 |
| MsG0380013940.01 | MsG0580025572.01 | -0.819367 | 1.205348e-52 | 9.256466e-50 |
| MsG0380013940.01 | MsG0580025573.01 | -0.811774 | 5.916917e-51 | 3.695230e-48 |
| MsG0380013940.01 | MsG0580026162.01 | -0.802047 | 6.753657e-49 | 3.275431e-46 |
| MsG0380013940.01 | MsG0580026362.01 | 0.812623 | 3.862114e-51 | 2.467627e-48 |
| MsG0380013940.01 | MsG0580026606.01 | -0.804670 | 1.931981e-49 | 1.002126e-46 |
| MsG0380013940.01 | MsG0580027095.01 | 0.809694 | 1.667319e-50 | 9.856333e-48 |
| MsG0380013940.01 | MsG0580027677.01 | 0.955868 | 1.119954e-113 | 3.505411e-108 |
| MsG0380013940.01 | MsG0580029583.01 | -0.838160 | 3.392201e-57 | 4.504635e-54 |
| MsG0380013940.01 | MsG0580029623.01 | -0.809316 | 2.009758e-50 | 1.176150e-47 |
| MsG0380013940.01 | MsG0580029792.01 | 0.827914 | 1.202106e-54 | 1.176726e-51 |
| MsG0380013940.01 | MsG0580030197.01 | 0.855347 | 6.704674e-62 | 1.543517e-58 |
| MsG0380013940.01 | MsG0580030237.01 | 0.832562 | 8.806910e-56 | 9.880372e-53 |
| MsG0380013940.01 | MsG0680030439.01 | 0.897444 | 1.397931e-76 | 1.579524e-72 |
| MsG0380013940.01 | MsG0680030635.01 | 0.807800 | 4.234273e-50 | 2.380775e-47 |
| MsG0380013940.01 | MsG0680030756.01 | 0.838430 | 2.888635e-57 | 3.868247e-54 |
| MsG0380013940.01 | MsG0680030961.01 | -0.810122 | 1.348266e-50 | 8.060175e-48 |
| MsG0380013940.01 | MsG0680031813.01 | 0.874339 | 7.298824e-68 | 3.273091e-64 |
| MsG0380013940.01 | MsG0680031866.01 | 0.806766 | 7.014272e-50 | 3.839248e-47 |
| MsG0380013940.01 | MsG0680032197.01 | 0.804184 | 2.439662e-49 | 1.249689e-46 |
| MsG0380013940.01 | MsG0680034229.01 | 0.859294 | 4.569815e-63 | 1.200837e-59 |
| MsG0380013940.01 | MsG0680035741.01 | -0.811482 | 6.849795e-51 | 4.245042e-48 |
| MsG0380013940.01 | MsG0680035841.01 | -0.833163 | 6.244980e-56 | 7.133032e-53 |
| MsG0380013940.01 | MsG0680035842.01 | -0.834859 | 2.348969e-56 | 2.822918e-53 |
| MsG0380013940.01 | MsG0680035870.01 | 0.814683 | 1.360149e-51 | 9.186925e-49 |
| MsG0380013940.01 | MsG0780036064.01 | 0.826686 | 2.367175e-54 | 2.235722e-51 |
| MsG0380013940.01 | MsG0780036068.01 | 0.856087 | 4.078699e-62 | 9.621739e-59 |
| MsG0380013940.01 | MsG0780037458.01 | 0.803716 | 3.052899e-49 | 1.545096e-46 |
| MsG0380013940.01 | MsG0780038047.01 | 0.879075 | 1.674943e-69 | 8.957458e-66 |
| MsG0380013940.01 | MsG0780038197.01 | 0.899012 | 3.017532e-77 | 3.660602e-73 |
| MsG0380013940.01 | MsG0780038198.01 | 0.850141 | 2.056666e-60 | 3.989472e-57 |
| MsG0380013940.01 | MsG0780038573.01 | 0.803382 | 3.580911e-49 | 1.796819e-46 |
| MsG0380013940.01 | MsG0780039816.01 | 0.804168 | 2.458880e-49 | 1.259022e-46 |
| MsG0380013940.01 | MsG0780039821.01 | 0.854726 | 1.015654e-61 | 2.289962e-58 |
| MsG0380013940.01 | MsG0780039836.01 | 0.838499 | 2.773386e-57 | 3.721523e-54 |
| MsG0380013940.01 | MsG0780039838.01 | 0.867314 | 1.499457e-65 | 5.212499e-62 |
| MsG0380013940.01 | MsG0780039839.01 | 0.845639 | 3.581636e-59 | 6.007754e-56 |
| MsG0380013940.01 | MsG0780039860.01 | 0.805805 | 1.117704e-49 | 5.969446e-47 |
| MsG0380013940.01 | MsG0780040060.01 | -0.805607 | 1.230212e-49 | 6.536715e-47 |
| MsG0380013940.01 | MsG0780040121.01 | 0.870826 | 1.088021e-66 | 4.292152e-63 |
| MsG0380013940.01 | MsG0780040144.01 | -0.817138 | 3.851842e-52 | 2.782186e-49 |
| MsG0380013940.01 | MsG0780040316.01 | 0.844300 | 8.234565e-59 | 1.323624e-55 |
| MsG0380013940.01 | MsG0780040321.01 | 0.806310 | 8.751997e-50 | 4.734874e-47 |
| MsG0380013940.01 | MsG0780040480.01 | -0.814458 | 1.525294e-51 | 1.024006e-48 |
| MsG0380013940.01 | MsG0780041007.01 | 0.808551 | 2.929100e-50 | 1.679782e-47 |
| MsG0380013940.01 | MsG0780041014.01 | 0.810557 | 1.086678e-50 | 6.571015e-48 |
| MsG0380013940.01 | MsG0780041121.01 | 0.833272 | 5.864838e-56 | 6.720558e-53 |
| MsG0380013940.01 | MsG0780041173.01 | 0.835598 | 1.528997e-56 | 1.878628e-53 |
| MsG0380013940.01 | MsG0780041254.01 | 0.820450 | 6.816348e-53 | 5.395424e-50 |
| MsG0380013940.01 | MsG0780041296.01 | 0.815960 | 7.071565e-52 | 4.945691e-49 |
| MsG0380013940.01 | MsG0780041478.01 | 0.813690 | 2.253227e-51 | 1.481541e-48 |
| MsG0380013940.01 | MsG0780041531.01 | 0.819234 | 1.292306e-52 | 9.888345e-50 |
| MsG0380013940.01 | MsG0780041620.01 | 0.826779 | 2.249460e-54 | 2.130113e-51 |
| MsG0380013940.01 | MsG0780041637.01 | 0.868717 | 5.305601e-66 | 1.939107e-62 |
| MsG0380013940.01 | MsG0780041720.01 | 0.866784 | 2.213656e-65 | 7.553414e-62 |
| MsG0380013940.01 | MsG0780041783.01 | 0.866963 | 1.940776e-65 | 6.663299e-62 |
| MsG0380013940.01 | MsG0780041809.01 | 0.817799 | 2.733986e-52 | 2.010883e-49 |
| MsG0380013940.01 | MsG0880041855.01 | 0.832615 | 8.546121e-56 | 9.602724e-53 |
| MsG0380013940.01 | MsG0880042291.01 | 0.840697 | 7.437498e-58 | 1.067978e-54 |
| MsG0380013940.01 | MsG0880042810.01 | -0.813564 | 2.401302e-51 | 1.573530e-48 |
| MsG0380013940.01 | MsG0880042858.01 | 0.846229 | 2.476756e-59 | 4.233921e-56 |
| MsG0380013940.01 | MsG0880043069.01 | 0.835427 | 1.688750e-56 | 2.064405e-53 |
| MsG0380013940.01 | MsG0880043109.01 | -0.806778 | 6.971383e-50 | 3.816995e-47 |
| MsG0380013940.01 | MsG0880043364.01 | -0.805301 | 1.425811e-49 | 7.516749e-47 |
| MsG0380013940.01 | MsG0880043715.01 | -0.807694 | 4.459231e-50 | 2.500235e-47 |
| MsG0380013940.01 | MsG0880043824.01 | -0.806418 | 8.305716e-50 | 4.505726e-47 |
| MsG0380013940.01 | MsG0880045097.01 | 0.877461 | 6.168944e-69 | 3.104508e-65 |
| MsG0380013940.01 | MsG0880045188.01 | 0.864441 | 1.213739e-64 | 3.811484e-61 |
| MsG0380013940.01 | MsG0880045273.01 | 0.807515 | 4.869035e-50 | 2.717445e-47 |
| MsG0380013940.01 | MsG0880045274.01 | 0.827489 | 1.521328e-54 | 1.470869e-51 |
| MsG0380013940.01 | MsG0880045321.01 | 0.826827 | 2.190301e-54 | 2.077073e-51 |
| MsG0380013940.01 | MsG0880045369.01 | 0.843523 | 1.329969e-58 | 2.086405e-55 |
| MsG0380013940.01 | MsG0880045385.01 | 0.858367 | 8.646955e-63 | 2.201596e-59 |
| MsG0380013940.01 | MsG0880045413.01 | 0.853355 | 2.523624e-61 | 5.437810e-58 |
| MsG0380013940.01 | MsG0880045414.01 | 0.821783 | 3.360889e-53 | 2.761071e-50 |
| MsG0380013940.01 | MsG0880045630.01 | 0.892329 | 1.755614e-74 | 1.597209e-70 |
| MsG0380013940.01 | MsG0880045778.01 | 0.800999 | 1.107223e-48 | 5.229878e-46 |
| MsG0380013940.01 | MsG0880045861.01 | -0.809804 | 1.578842e-50 | 9.360547e-48 |
| MsG0380013940.01 | MsG0880045968.01 | 0.805232 | 1.474694e-49 | 7.760613e-47 |
| MsG0380013940.01 | MsG0880046099.01 | 0.873960 | 9.803120e-68 | 4.334646e-64 |
| MsG0380013940.01 | MsG0880046167.01 | 0.819541 | 1.099959e-52 | 8.489138e-50 |
| MsG0380013940.01 | MsG0880046219.01 | 0.860014 | 2.775366e-63 | 7.477153e-60 |
| MsG0380013940.01 | MsG0880046251.01 | 0.806604 | 7.587264e-50 | 4.135645e-47 |
| MsG0380013940.01 | MsG0880046331.01 | 0.821494 | 3.919838e-53 | 3.193953e-50 |
| MsG0380013940.01 | MsG0880046341.01 | 0.814256 | 1.690301e-51 | 1.128596e-48 |
| MsG0380013940.01 | MsG0880046469.01 | 0.873159 | 1.824525e-67 | 7.839281e-64 |
| MsG0380013940.01 | MsG0880046630.01 | 0.822693 | 2.066214e-53 | 1.742064e-50 |
| MsG0380013940.01 | MsG0880047256.01 | -0.806812 | 6.858463e-50 | 3.758581e-47 |
| MsG0380013940.01 | MsG0880047318.01 | 0.861285 | 1.142477e-63 | 3.216270e-60 |
| MsG0380013940.01 | MsG0880047465.01 | -0.815932 | 7.173489e-52 | 5.013122e-49 |
| MsG0380013940.01 | MsG0880047628.01 | 0.800164 | 1.638588e-48 | 7.576490e-46 |
| MsG0280006475.01 | MsG0380013940.01 | 0.872737 | 2.526492e-67 | 1.068977e-63 |
| MsG0280007233.01 | MsG0380013940.01 | 0.824861 | 6.418041e-54 | 5.754843e-51 |
| MsG0280007247.01 | MsG0380013940.01 | 0.803257 | 3.799676e-49 | 1.900558e-46 |
| MsG0280007649.01 | MsG0380013940.01 | 0.826370 | 2.816436e-54 | 2.636306e-51 |
| MsG0280007650.01 | MsG0380013940.01 | 0.831147 | 1.967828e-55 | 2.117085e-52 |
| MsG0280007759.01 | MsG0380013940.01 | -0.817529 | 3.146102e-52 | 2.296836e-49 |
| MsG0280007760.01 | MsG0380013940.01 | -0.816286 | 5.980229e-52 | 4.220203e-49 |
| MsG0280007786.01 | MsG0380013940.01 | -0.810481 | 1.128304e-50 | 6.808977e-48 |
| MsG0280007840.01 | MsG0380013940.01 | -0.806500 | 7.980835e-50 | 4.338640e-47 |
| MsG0280008820.01 | MsG0380013940.01 | 0.860397 | 2.125354e-63 | 5.801448e-60 |
| MsG0280008912.01 | MsG0380013940.01 | 0.827024 | 1.965770e-54 | 1.874917e-51 |
| MsG0280009008.01 | MsG0380013940.01 | 0.811164 | 8.027329e-51 | 4.933084e-48 |
| MsG0280009094.01 | MsG0380013940.01 | 0.800346 | 1.504623e-48 | 6.989841e-46 |
| MsG0280009541.01 | MsG0380013940.01 | 0.863691 | 2.077563e-64 | 6.354792e-61 |
| MsG0280009742.01 | MsG0380013940.01 | 0.856309 | 3.509053e-62 | 8.338784e-59 |
| MsG0280009776.01 | MsG0380013940.01 | 0.837690 | 4.480195e-57 | 5.865699e-54 |
| MsG0280009864.01 | MsG0380013940.01 | 0.846844 | 1.682474e-59 | 2.934049e-56 |
| MsG0280009971.01 | MsG0380013940.01 | -0.859981 | 2.838689e-63 | 7.638884e-60 |
| MsG0280010137.01 | MsG0380013940.01 | 0.830967 | 2.178986e-55 | 2.331837e-52 |
| MsG0280010140.01 | MsG0380013940.01 | 0.830665 | 2.584695e-55 | 2.741348e-52 |
| MsG0280010142.01 | MsG0380013940.01 | 0.906174 | 1.967294e-80 | 3.292518e-76 |
| MsG0280010143.01 | MsG0380013940.01 | 0.909056 | 8.678662e-82 | 1.657814e-77 |
| MsG0280010144.01 | MsG0380013940.01 | 0.897936 | 8.665597e-77 | 1.001839e-72 |
| MsG0280010145.01 | MsG0380013940.01 | 0.900375 | 7.804238e-78 | 1.006762e-73 |
| MsG0280010227.01 | MsG0380013940.01 | 0.824251 | 8.933455e-54 | 7.870184e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013940.01.T03 | MTR_2g076050 | 92.593 | 27 | 2 | 0 | 1 | 27 | 1 | 27 | 1.34e-12 | 55.1 |
| MsG0380013940.01.T02 | MTR_2g076050 | 69.231 | 52 | 10 | 1 | 2 | 47 | 9 | 60 | 1.17e-17 | 68.6 |
| MsG0380013940.01.T01 | MTR_0002s0700 | 97.590 | 83 | 2 | 0 | 1 | 83 | 1 | 83 | 7.54e-55 | 164 |
| MsG0380013940.01.T01 | MTR_4g050850 | 98.765 | 81 | 1 | 0 | 1 | 81 | 1 | 81 | 1.29e-53 | 163 |
| MsG0380013940.01.T01 | MTR_5g055290 | 98.684 | 76 | 1 | 0 | 1 | 76 | 1 | 76 | 1.50e-49 | 151 |
| MsG0380013940.01.T01 | MTR_6g007780 | 94.737 | 38 | 2 | 0 | 24 | 61 | 75 | 112 | 5.05e-20 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013940.01.T03 | ATCG00570 | 97.436 | 39 | 1 | 0 | 1 | 39 | 1 | 39 | 4.57e-22 | 78.6 |
| MsG0380013940.01.T01 | ATCG00580 | 97.590 | 83 | 2 | 0 | 1 | 83 | 1 | 83 | 6.84e-55 | 164 |
Find 28 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTAGCTTACGATGTATT+TGG | 0.244623 | 3:-48471286 | MsG0380013940.01.T01:CDS |
| TCAAAACGGCCAGTTATTAA+TGG | 0.307608 | 3:+48471217 | None:intergenic |
| GTAGCTCTATAATTCGGATT+AGG | 0.338134 | 3:+48471024 | None:intergenic |
| ATAACCAACCCGCAATGAAT+AGG | 0.348030 | 3:+48471320 | None:intergenic |
| TTATTACCAGTATTCGATAC+TGG | 0.348418 | 3:-48471369 | MsG0380013940.01.T01:CDS |
| TATGTGGAGCTCGGCATGTC+TGG | 0.349487 | 3:-48471421 | None:intergenic |
| ATACCCTCCCTATTCATTGC+GGG | 0.391873 | 3:-48471328 | MsG0380013940.01.T01:CDS |
| TAACCAACCCGCAATGAATA+GGG | 0.406851 | 3:+48471321 | None:intergenic |
| CTTTCTGTAAAATACTCGTT+TGG | 0.412027 | 3:+48471253 | None:intergenic |
| CAAGGAATTCCATTAATAAC+TGG | 0.412082 | 3:-48471226 | MsG0380013940.01.T01:CDS |
| TGTGTCGTAGCTCTATAATT+CGG | 0.415726 | 3:+48471018 | None:intergenic |
| AATAATCCAGTATCGAATAC+TGG | 0.423687 | 3:+48471363 | None:intergenic |
| TTATTAATGGAATTCCTTGT+CGG | 0.434610 | 3:+48471230 | None:intergenic |
| AATGGGATAGGTCCTATCTA+TGG | 0.452739 | 3:+48471141 | None:intergenic |
| TAGGTCCTATCTATGGTCAT+TGG | 0.484830 | 3:+48471148 | None:intergenic |
| AGGCTCCAATGACCATAGAT+AGG | 0.506879 | 3:-48471153 | None:intergenic |
| CTCGGCATGTCTGGAAGCAC+AGG | 0.508926 | 3:-48471412 | None:intergenic |
| ATTCGGATTAGGTTTATCGT+TGG | 0.512045 | 3:+48471035 | None:intergenic |
| GTACGATGGTTGGCTGTTCA+CGG | 0.514822 | 3:-48471112 | MsG0380013940.01.T03:CDS |
| GGTTGGTTATTTGTCAGCAC+GGG | 0.523918 | 3:-48471307 | MsG0380013940.01.T01:CDS |
| GGGTTGGTTATTTGTCAGCA+CGG | 0.532372 | 3:-48471308 | MsG0380013940.01.T01:CDS |
| CCTCCCTATTCATTGCGGGT+TGG | 0.536548 | 3:-48471324 | MsG0380013940.01.T01:CDS |
| GTAAAATACTCGTTTGGACG+AGG | 0.550593 | 3:+48471259 | None:intergenic |
| GTTGTTCCAAAGAATCAAAA+CGG | 0.551629 | 3:+48471203 | None:intergenic |
| TATACCCTCCCTATTCATTG+CGG | 0.586067 | 3:-48471329 | MsG0380013940.01.T01:CDS |
| GTTGGCTGTTCACGGACTAG+CGG | 0.657866 | 3:-48471104 | MsG0380013940.01.T02:CDS |
| CAACCCGCAATGAATAGGGA+GGG | 0.665638 | 3:+48471325 | None:intergenic |
| CCAACCCGCAATGAATAGGG+AGG | 0.678708 | 3:+48471324 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCAACATTTTGTTCATT+TGG | + | Chr3:48471407-48471426 | None:intergenic | 20.0% |
| !!! | ATTCAACATTTTGTTCATTT+GGG | + | Chr3:48471406-48471425 | None:intergenic | 20.0% |
| !!! | TGAATTTAGTAGATCTTTTT+AGG | - | Chr3:48471216-48471235 | MsG0380013940.01.T01:CDS | 20.0% |
| ! | TATTGATCCCAAAAAAAAGA+CGG | + | Chr3:48471320-48471339 | None:intergenic | 25.0% |
| ! | TTATTAATGGAATTCCTTGT+CGG | + | Chr3:48471165-48471184 | None:intergenic | 25.0% |
| !!! | ATTTAGTAGATCTTTTTAGG+AGG | - | Chr3:48471219-48471238 | MsG0380013940.01.T01:CDS | 25.0% |
| AACCATCGTACTGTAAAAAT+GGG | + | Chr3:48471271-48471290 | None:intergenic | 30.0% | |
| CAAGGAATTCCATTAATAAC+TGG | - | Chr3:48471166-48471185 | MsG0380013940.01.T05:CDS | 30.0% | |
| CTTTCTGTAAAATACTCGTT+TGG | + | Chr3:48471142-48471161 | None:intergenic | 30.0% | |
| GTTGTTCCAAAGAATCAAAA+CGG | + | Chr3:48471192-48471211 | None:intergenic | 30.0% | |
| TTATTACCAGTATTCGATAC+TGG | - | Chr3:48471023-48471042 | MsG0380013940.01.T02:CDS | 30.0% | |
| ! | AATAATCCAGTATCGAATAC+TGG | + | Chr3:48471032-48471051 | None:intergenic | 30.0% |
| CAACCATCGTACTGTAAAAA+TGG | + | Chr3:48471272-48471291 | None:intergenic | 35.0% | |
| TCAAAACGGCCAGTTATTAA+TGG | + | Chr3:48471178-48471197 | None:intergenic | 35.0% | |
| TCGTACTGTAAAAATGGGAT+AGG | + | Chr3:48471266-48471285 | None:intergenic | 35.0% | |
| ! | ATTCGGATTAGGTTTATCGT+TGG | + | Chr3:48471360-48471379 | None:intergenic | 35.0% |
| ! | CATTTTTACAGTACGATGGT+TGG | - | Chr3:48471270-48471289 | MsG0380013940.01.T01:CDS | 35.0% |
| ! | GGTTTAGCTTACGATGTATT+TGG | - | Chr3:48471106-48471125 | MsG0380013940.01.T02:CDS | 35.0% |
| ! | GTAGCTCTATAATTCGGATT+AGG | + | Chr3:48471371-48471390 | None:intergenic | 35.0% |
| ! | TATTTTACAGAAAGCCGACA+AGG | - | Chr3:48471148-48471167 | MsG0380013940.01.T03:CDS | 35.0% |
| ! | TGTGTCGTAGCTCTATAATT+CGG | + | Chr3:48471377-48471396 | None:intergenic | 35.0% |
| !! | ATCCCATTTTTACAGTACGA+TGG | - | Chr3:48471266-48471285 | MsG0380013940.01.T01:CDS | 35.0% |
| AATGGGATAGGTCCTATCTA+TGG | + | Chr3:48471254-48471273 | None:intergenic | 40.0% | |
| ATAACCAACCCGCAATGAAT+AGG | + | Chr3:48471075-48471094 | None:intergenic | 40.0% | |
| GATCCCAAAAAAAAGACGGT+GGG | + | Chr3:48471316-48471335 | None:intergenic | 40.0% | |
| GTAAAATACTCGTTTGGACG+AGG | + | Chr3:48471136-48471155 | None:intergenic | 40.0% | |
| TAACCAACCCGCAATGAATA+GGG | + | Chr3:48471074-48471093 | None:intergenic | 40.0% | |
| TAGGTCCTATCTATGGTCAT+TGG | + | Chr3:48471247-48471266 | None:intergenic | 40.0% | |
| TATACCCTCCCTATTCATTG+CGG | - | Chr3:48471063-48471082 | MsG0380013940.01.T02:CDS | 40.0% | |
| TGATCCCAAAAAAAAGACGG+TGG | + | Chr3:48471317-48471336 | None:intergenic | 40.0% | |
| !!! | AACTGGCCGTTTTGATTCTT+TGG | - | Chr3:48471183-48471202 | MsG0380013940.01.T01:CDS | 40.0% |
| !!! | GTACCCACCGTCTTTTTTTT+GGG | - | Chr3:48471310-48471329 | MsG0380013940.01.T01:CDS | 40.0% |
| AGGCTCCAATGACCATAGAT+AGG | - | Chr3:48471239-48471258 | MsG0380013940.01.T01:CDS | 45.0% | |
| ATACCCTCCCTATTCATTGC+GGG | - | Chr3:48471064-48471083 | MsG0380013940.01.T02:CDS | 45.0% | |
| ! | GGTTGGTTATTTGTCAGCAC+GGG | - | Chr3:48471085-48471104 | MsG0380013940.01.T02:CDS | 45.0% |
| !! | GGGTTGGTTATTTGTCAGCA+CGG | - | Chr3:48471084-48471103 | MsG0380013940.01.T02:CDS | 45.0% |
| !!! | GGTACCCACCGTCTTTTTTT+TGG | - | Chr3:48471309-48471328 | MsG0380013940.01.T01:CDS | 45.0% |
| CAACCCGCAATGAATAGGGA+GGG | + | Chr3:48471070-48471089 | None:intergenic | 50.0% | |
| ! | GTACGATGGTTGGCTGTTCA+CGG | - | Chr3:48471280-48471299 | MsG0380013940.01.T01:CDS | 50.0% |
| CCAACCCGCAATGAATAGGG+AGG | + | Chr3:48471071-48471090 | None:intergenic | 55.0% | |
| CCTCCCTATTCATTGCGGGT+TGG | - | Chr3:48471068-48471087 | MsG0380013940.01.T02:CDS | 55.0% | |
| !! | GTTGGCTGTTCACGGACTAG+CGG | - | Chr3:48471288-48471307 | MsG0380013940.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48470986 | 48471428 | 48470986 | ID=MsG0380013940.01;Name=MsG0380013940.01 |
| Chr3 | mRNA | 48471177 | 48471428 | 48471177 | ID=MsG0380013940.01.T01;Parent=MsG0380013940.01;Name=MsG0380013940.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|0|1|0|83 |
| Chr3 | exon | 48471177 | 48471428 | 48471177 | ID=MsG0380013940.01.T01:exon:4183;Parent=MsG0380013940.01.T01 |
| Chr3 | CDS | 48471177 | 48471428 | 48471177 | ID=MsG0380013940.01.T01:cds;Parent=MsG0380013940.01.T01 |
| Chr3 | mRNA | 48470986 | 48471129 | 48470986 | ID=MsG0380013940.01.T02;Parent=MsG0380013940.01;Name=MsG0380013940.01.T02;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|0|1|0|47 |
| Chr3 | exon | 48470986 | 48471129 | 48470986 | ID=MsG0380013940.01.T02:exon:4184;Parent=MsG0380013940.01.T02 |
| Chr3 | CDS | 48470986 | 48471129 | 48470986 | ID=MsG0380013940.01.T02:cds;Parent=MsG0380013940.01.T02 |
| Chr3 | mRNA | 48471048 | 48471167 | 48471048 | ID=MsG0380013940.01.T03;Parent=MsG0380013940.01;Name=MsG0380013940.01.T03;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|39 |
| Chr3 | exon | 48471048 | 48471167 | 48471048 | ID=MsG0380013940.01.T03:exon:4185;Parent=MsG0380013940.01.T03 |
| Chr3 | CDS | 48471048 | 48471167 | 48471048 | ID=MsG0380013940.01.T03:cds;Parent=MsG0380013940.01.T03 |
| Chr3 | mRNA | 48471233 | 48471295 | 48471233 | ID=MsG0380013940.01.T04;Parent=MsG0380013940.01;Name=MsG0380013940.01.T04;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|20 |
| Chr3 | exon | 48471233 | 48471295 | 48471233 | ID=MsG0380013940.01.T04:exon:4186;Parent=MsG0380013940.01.T04 |
| Chr3 | CDS | 48471233 | 48471295 | 48471233 | ID=MsG0380013940.01.T04:cds;Parent=MsG0380013940.01.T04 |
| Chr3 | mRNA | 48471164 | 48471199 | 48471164 | ID=MsG0380013940.01.T05;Parent=MsG0380013940.01;Name=MsG0380013940.01.T05;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|11 |
| Chr3 | exon | 48471164 | 48471199 | 48471164 | ID=MsG0380013940.01.T05:exon:4187;Parent=MsG0380013940.01.T05 |
| Chr3 | CDS | 48471164 | 48471199 | 48471164 | ID=MsG0380013940.01.T05:cds;Parent=MsG0380013940.01.T05 |
| Chr3 | mRNA | 48470986 | 48471006 | 48470986 | ID=MsG0380013940.01.T06;Parent=MsG0380013940.01;Name=MsG0380013940.01.T06;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|6 |
| Chr3 | exon | 48470986 | 48471006 | 48470986 | ID=MsG0380013940.01.T06:exon:4188;Parent=MsG0380013940.01.T06 |
| Chr3 | CDS | 48470986 | 48471006 | 48470986 | ID=MsG0380013940.01.T06:cds;Parent=MsG0380013940.01.T06 |
| Chr3 | mRNA | 48471048 | 48471068 | 48471048 | ID=MsG0380013940.01.T07;Parent=MsG0380013940.01;Name=MsG0380013940.01.T07;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|6 |
| Chr3 | exon | 48471048 | 48471068 | 48471048 | ID=MsG0380013940.01.T07:exon:4189;Parent=MsG0380013940.01.T07 |
| Chr3 | CDS | 48471048 | 48471068 | 48471048 | ID=MsG0380013940.01.T07:cds;Parent=MsG0380013940.01.T07 |
| Gene Sequence |
| Protein sequence |
