AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004130.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004130.01.T01 MTR_1g075720 99.242 132 1 0 89 220 2 133 5.17e-89 258
MsG0180004130.01.T01 MTR_4g120770 95.455 132 6 0 89 220 2 133 2.39e-87 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004130.01.T01 AT2G20450 85.496 131 19 0 90 220 3 133 2.70e-75 224
MsG0180004130.01.T01 AT4G27090 85.938 128 18 0 90 217 3 130 3.07e-74 221

Find 63 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTAAATTGTGGGTGTATT+TGG 0.208884 1:-73750657 None:intergenic
TGAACCTATCAAAATCATTA+AGG 0.237759 1:-73751866 None:intergenic
TATGCAATCAAAAGCATAAA+TGG 0.243731 1:-73752759 None:intergenic
GATTATGTTGGCCAAGATTA+AGG 0.263288 1:+73751890 MsG0180004130.01.T01:CDS
AGGTTTCTGCTAAGATTTCT+AGG 0.276491 1:+73750239 MsG0180004130.01.T01:CDS
GTCAACTATGGTCCAGATTA+TGG 0.285686 1:+73751393 MsG0180004130.01.T01:CDS
ACTGATTTGGACAGGCATTT+AGG 0.292325 1:+73750210 MsG0180004130.01.T01:intron
ATCCATGAAGGCTTCTTTGC+TGG 0.309411 1:-73750281 None:intergenic
TGCCAGCAAAGAAGCCTTCA+TGG 0.323868 1:+73750279 MsG0180004130.01.T01:CDS
GAAAATGGGTTACCCTAGTT+TGG 0.329740 1:-73751446 None:intergenic
TTTGACGAGATCCTTCTTCT+TGG 0.330249 1:-73751642 None:intergenic
TGCTCTATGTGCATTTGATT+TGG 0.338287 1:-73750629 None:intergenic
GAAAGCCTCTTGAAATTGAT+TGG 0.348542 1:-73751584 None:intergenic
TTGACGAGATCCTTCTTCTT+GGG 0.370770 1:-73751641 None:intergenic
ACAACGAGCTTGCCATAATC+TGG 0.375981 1:-73751405 None:intergenic
CTAAAATTATACCTTAATCT+TGG 0.381940 1:-73751901 None:intergenic
CAGCTAATGCCAACAGAGTT+GGG 0.420991 1:-73750679 None:intergenic
TGCAGAGGGCTGGTGTTGTT+AGG 0.431787 1:+73752618 MsG0180004130.01.T01:intron
TTGATGTTATCGACCAAACT+AGG 0.433748 1:+73751433 MsG0180004130.01.T01:CDS
AAATAAATCTCATAAATAGA+AGG 0.437678 1:-73752722 None:intergenic
GAACCTATCAAAATCATTAA+GGG 0.440003 1:-73751865 None:intergenic
AACAATCAATTTCCTTCCCC+AGG 0.448020 1:-73751826 None:intergenic
ATTGGAGCTCTCTCCATGTC+AGG 0.463357 1:-73751566 None:intergenic
AGAGTTGCACTTGTCAACTA+TGG 0.467898 1:+73751381 MsG0180004130.01.T01:CDS
CAGAGTTGGGATTAAATTGT+GGG 0.472021 1:-73750666 None:intergenic
AATTCTACCTGCAGCTTCCA+TGG 0.474519 1:-73751666 None:intergenic
GCTGAGGAAGACCGCAGCTT+AGG 0.479614 1:+73752655 MsG0180004130.01.T01:CDS
TTTCAATTTGTGCAGAGGGC+TGG 0.483986 1:+73752608 MsG0180004130.01.T01:intron
TTTCGTGCAGAGCAAGAACT+TGG 0.484039 1:+73746827 MsG0180004130.01.T01:CDS
CAATTTAATCCCAACTCTGT+TGG 0.487766 1:+73750670 MsG0180004130.01.T01:CDS
TCAGCTAATGCCAACAGAGT+TGG 0.490805 1:-73750680 None:intergenic
GGAAATTGATTGTTAAGAAG+AGG 0.493248 1:+73751835 MsG0180004130.01.T01:CDS
AATCTGTTAGAAGTTTCAAA+TGG 0.493350 1:+73752890 MsG0180004130.01.T01:three_prime_UTR
TTCAAGAGGTTTGTTGAGAT+CGG 0.494020 1:+73751357 MsG0180004130.01.T01:CDS
CAAGAGAGTTCCCAAGAAGA+AGG 0.508677 1:+73751631 MsG0180004130.01.T01:CDS
TATGATACCAAGTCATGAAT+CGG 0.522601 1:-73752959 None:intergenic
ACAGAGTTGGGATTAAATTG+TGG 0.524716 1:-73750667 None:intergenic
TTCTGCTAAGATTTCTAGGA+AGG 0.531817 1:+73750243 MsG0180004130.01.T01:CDS
GACAGGCATTTAGGTTGAGA+AGG 0.532327 1:+73750219 MsG0180004130.01.T01:intron
TACAACTCCGATTCATGACT+TGG 0.533448 1:+73752952 MsG0180004130.01.T01:three_prime_UTR
ACAAGTGGGAGAAGAGCTCC+TGG 0.539704 1:+73751808 MsG0180004130.01.T01:CDS
AATTGATTGTTAAGAAGAGG+AGG 0.539799 1:+73751838 MsG0180004130.01.T01:CDS
TGATAGGTTCAAGATTATGT+TGG 0.542816 1:+73751878 MsG0180004130.01.T01:CDS
TGATAGATGTGAAGAACAAG+TGG 0.562094 1:+73751793 MsG0180004130.01.T01:intron
GTCAAAGCCATGGAAGCTGC+AGG 0.563654 1:+73751659 MsG0180004130.01.T01:CDS
TCTGTTGGCATTAGCTGAGA+AGG 0.567817 1:+73750685 MsG0180004130.01.T01:CDS
ATCTCAACAAACCTCTTGAA+CGG 0.571035 1:-73751354 None:intergenic
GATTTCTAGGAAGGAAGAGA+AGG 0.572846 1:+73750252 MsG0180004130.01.T01:CDS
GAAGGATCTCGTCAAAGCCA+TGG 0.572972 1:+73751649 MsG0180004130.01.T01:CDS
GAGCTCCAATCAATTTCAAG+AGG 0.584468 1:+73751579 MsG0180004130.01.T01:CDS
ATCAAGCAAGAAAGAGCTAG+AGG 0.585153 1:+73752813 MsG0180004130.01.T01:three_prime_UTR
GGGAGAAGAGCTCCTGGGGA+AGG 0.586483 1:+73751814 MsG0180004130.01.T01:CDS
TCTTTGTTCAGCCGTTCAAG+AGG 0.591089 1:+73751343 MsG0180004130.01.T01:intron
TCTTGTTGATGCACCTGACA+TGG 0.596389 1:+73751553 MsG0180004130.01.T01:CDS
ATTGATTGTTAAGAAGAGGA+GGG 0.602431 1:+73751839 MsG0180004130.01.T01:CDS
TGATGTTATCGACCAAACTA+GGG 0.607546 1:+73751434 MsG0180004130.01.T01:CDS
ACAAAATGTGAACTTGCAAG+AGG 0.612685 1:+73746877 MsG0180004130.01.T01:CDS
GGCAAGAACTTGCTAAGCTG+AGG 0.613930 1:+73752639 MsG0180004130.01.T01:CDS
AAGTGGGAGAAGAGCTCCTG+GGG 0.619297 1:+73751810 MsG0180004130.01.T01:CDS
GATAGATGTGAAGAACAAGT+GGG 0.623335 1:+73751794 MsG0180004130.01.T01:intron
GTTACTGGTGTCATCCATGA+AGG 0.634278 1:-73750293 None:intergenic
CAAGTGGGAGAAGAGCTCCT+GGG 0.641380 1:+73751809 MsG0180004130.01.T01:CDS
ATGAAGTAATGCCTAAGCTG+CGG 0.676586 1:-73752666 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTAAAATATTACTAATT+TGG - Chr1:73748701-73748720 None:intergenic 10.0%
!! TATTCAATATATATAGATAT+AGG - Chr1:73749750-73749769 None:intergenic 10.0%
!! TATTTAGAAAATAGTATATT+TGG - Chr1:73747313-73747332 None:intergenic 10.0%
!!! AAATTAGAAAGTATATTTTA+CGG - Chr1:73748431-73748450 None:intergenic 10.0%
!!! AATATACTTTCTAATTTTTA+TGG + Chr1:73748434-73748453 MsG0180004130.01.T01:intron 10.0%
!!! ATTGTATTTTTTTTTTTTTG+TGG + Chr1:73751750-73751769 MsG0180004130.01.T01:intron 10.0%
!!! ATTTTTACTTTTTTAAATTG+AGG - Chr1:73748321-73748340 None:intergenic 10.0%
!! AAAGTAAAAATAAAGGATAA+AGG + Chr1:73748330-73748349 MsG0180004130.01.T01:intron 15.0%
!! AAATAAATCTCATAAATAGA+AGG - Chr1:73752725-73752744 None:intergenic 15.0%
!! AATACAAAAAAGTTGAAAAT+GGG - Chr1:73748848-73748867 None:intergenic 15.0%
!! ACAAAAATAAATACATAGAT+AGG - Chr1:73751703-73751722 None:intergenic 15.0%
!! CGTAATTATAAAAGTAAAAA+CGG - Chr1:73747155-73747174 None:intergenic 15.0%
!! GTAATTATAAAAGTAAAAAC+GGG - Chr1:73747154-73747173 None:intergenic 15.0%
!! TAATCTTTGATCATAAAATT+TGG + Chr1:73752376-73752395 MsG0180004130.01.T01:intron 15.0%
!! TACAACTAGATAATTAAAAA+GGG - Chr1:73750534-73750553 None:intergenic 15.0%
!! TGCAATAATATAAATAGATT+TGG + Chr1:73749318-73749337 MsG0180004130.01.T01:intron 15.0%
!!! AATTTTATGATCAAAGATTA+AGG - Chr1:73752376-73752395 None:intergenic 15.0%
!!! ATAATAGCTTTTCTTTATTT+TGG + Chr1:73751126-73751145 MsG0180004130.01.T01:intron 15.0%
!!! ATTTTAGAGTAATTTTTACT+CGG + Chr1:73748183-73748202 MsG0180004130.01.T01:intron 15.0%
!!! ATTTTATGATCAAAGATTAA+GGG - Chr1:73752375-73752394 None:intergenic 15.0%
!!! CGTTTTTACTTTTATAATTA+CGG + Chr1:73747153-73747172 MsG0180004130.01.T01:intron 15.0%
!!! TAATAGCTTTTCTTTATTTT+GGG + Chr1:73751127-73751146 MsG0180004130.01.T01:intron 15.0%
!!! TGTTTTAAACTAAGAAAATT+TGG + Chr1:73749080-73749099 MsG0180004130.01.T01:intron 15.0%
!!! TTTATTCTAAAGTTAAACTA+AGG - Chr1:73748015-73748034 None:intergenic 15.0%
!!! TTTTTTTTTTTTGTGGTAAT+TGG + Chr1:73751757-73751776 MsG0180004130.01.T01:intron 15.0%
!! AAAGATTGGAAATTTGAAAA+TGG - Chr1:73751464-73751483 None:intergenic 20.0%
!! AACTAAAAATAACAAAACAC+AGG - Chr1:73747655-73747674 None:intergenic 20.0%
!! AAGATTGGAAATTTGAAAAT+GGG - Chr1:73751463-73751482 None:intergenic 20.0%
!! AAGTTCAATGTAATGTTATA+TGG - Chr1:73749963-73749982 None:intergenic 20.0%
!! AATTAAGGTTCATAAATTTG+TGG + Chr1:73746960-73746979 MsG0180004130.01.T01:intron 20.0%
!! ATTAGAGAAAGATTAAGAAA+TGG - Chr1:73751311-73751330 None:intergenic 20.0%
!! CAATACAAAAAAGTTGAAAA+TGG - Chr1:73748849-73748868 None:intergenic 20.0%
!! CTAAAATTATACCTTAATCT+TGG - Chr1:73751904-73751923 None:intergenic 20.0%
!! CTACAACTAGATAATTAAAA+AGG - Chr1:73750535-73750554 None:intergenic 20.0%
!! GAAGAATAAATAATTGTGAA+CGG - Chr1:73748818-73748837 None:intergenic 20.0%
!! GTAATGTTATATGGAAATAA+TGG - Chr1:73749954-73749973 None:intergenic 20.0%
!! GTACATATAGAAATTTATGA+AGG - Chr1:73747984-73748003 None:intergenic 20.0%
!! TAATAATTAAACCTACATCA+TGG + Chr1:73749267-73749286 MsG0180004130.01.T01:intron 20.0%
!! TAATACGAAAATGATTAGAA+TGG - Chr1:73748268-73748287 None:intergenic 20.0%
!! TATCACTTAGTAATTAGTAT+TGG + Chr1:73747214-73747233 MsG0180004130.01.T01:intron 20.0%
!! TATTACGAAAAATCAAGAAT+AGG + Chr1:73747044-73747063 MsG0180004130.01.T01:intron 20.0%
!! TGAATCAAAGTTATAAATCT+TGG + Chr1:73748888-73748907 MsG0180004130.01.T01:intron 20.0%
!! TGATATTCAATAGAAAGAAA+GGG - Chr1:73749481-73749500 None:intergenic 20.0%
!! TTAAGTTATTTATCCAAACA+AGG - Chr1:73752055-73752074 None:intergenic 20.0%
!! TTAATTCAATTTAGTAGCTT+GGG + Chr1:73749583-73749602 MsG0180004130.01.T01:intron 20.0%
!!! AACAAACAGTTTTTTCTTAA+TGG - Chr1:73749436-73749455 None:intergenic 20.0%
!!! ATTGTATTTCTATAAGCTTT+AGG + Chr1:73752158-73752177 MsG0180004130.01.T01:intron 20.0%
!!! CTTTTTAATTATCTAGTTGT+AGG + Chr1:73750533-73750552 MsG0180004130.01.T01:intron 20.0%
!!! GATTGCATATTTTTTAATGT+CGG + Chr1:73752773-73752792 MsG0180004130.01.T01:three_prime_UTR 20.0%
!!! GTTTGCATATTTTTTAATGT+TGG + Chr1:73752851-73752870 MsG0180004130.01.T01:three_prime_UTR 20.0%
!!! TATATTTGGAGTGTAAATAT+TGG - Chr1:73747299-73747318 None:intergenic 20.0%
!!! TCTTACATTATTTTGACATT+TGG + Chr1:73747902-73747921 MsG0180004130.01.T01:intron 20.0%
!!! TGTAAATATTTTCTTTTACG+TGG + Chr1:73747855-73747874 MsG0180004130.01.T01:intron 20.0%
!!! TGTGAAATGATTTTAAGTTA+GGG + Chr1:73751945-73751964 MsG0180004130.01.T01:intron 20.0%
!!! TTGAATATCAGTTTTTCTTT+TGG + Chr1:73749491-73749510 MsG0180004130.01.T01:intron 20.0%
!!! TTGTATTTCTATAAGCTTTA+GGG + Chr1:73752159-73752178 MsG0180004130.01.T01:intron 20.0%
!!! TTGTGAAATGATTTTAAGTT+AGG + Chr1:73751944-73751963 MsG0180004130.01.T01:intron 20.0%
!!! TTTGTGATGTTTTATAAAGA+GGG - Chr1:73751184-73751203 None:intergenic 20.0%
!!! TTTTCAGAAATTAAGCAAAT+GGG - Chr1:73751504-73751523 None:intergenic 20.0%
!!! TTTTGTGATGTTTTATAAAG+AGG - Chr1:73751185-73751204 None:intergenic 20.0%
!!! TTTTTCAGAAATTAAGCAAA+TGG - Chr1:73751505-73751524 None:intergenic 20.0%
! AAAAAGGATAACCCTTAAAA+GGG + Chr1:73749038-73749057 MsG0180004130.01.T01:intron 25.0%
! AAATGGCACATAAATATTCA+CGG - Chr1:73748763-73748782 None:intergenic 25.0%
! AAGACATAATATCTTGAACT+GGG - Chr1:73747594-73747613 None:intergenic 25.0%
! AATAGCTAGATCGTATAAAT+AGG - Chr1:73748114-73748133 None:intergenic 25.0%
! AATCTGTTAGAAGTTTCAAA+TGG + Chr1:73752890-73752909 MsG0180004130.01.T01:three_prime_UTR 25.0%
! ATAAAATCCGTCAAACAAAA+AGG + Chr1:73749022-73749041 MsG0180004130.01.T01:intron 25.0%
! ATATGTAGAAGAAATTAGTC+TGG + Chr1:73747927-73747946 MsG0180004130.01.T01:intron 25.0%
! ATATTATTGCATATGATCTG+AGG - Chr1:73749309-73749328 None:intergenic 25.0%
! ATTGTTTGATCAAAACTTGA+AGG - Chr1:73749875-73749894 None:intergenic 25.0%
! ATTTCTTGAACAAATCAACT+TGG - Chr1:73747117-73747136 None:intergenic 25.0%
! CAAGTTTGTCTATGAAAAAA+CGG - Chr1:73752282-73752301 None:intergenic 25.0%
! CCAAATGAATTCGAATTAAA+AGG + Chr1:73749129-73749148 MsG0180004130.01.T01:intron 25.0%
! CTGATATTCAATAGAAAGAA+AGG - Chr1:73749482-73749501 None:intergenic 25.0%
! CTTGAAATCCATTTCAAAAT+TGG + Chr1:73750582-73750601 MsG0180004130.01.T01:intron 25.0%
! GAACCTATCAAAATCATTAA+GGG - Chr1:73751868-73751887 None:intergenic 25.0%
! GGTTATTATATAAGCTGTTA+TGG + Chr1:73752098-73752117 MsG0180004130.01.T01:intron 25.0%
! GTAAAAATAAAGGATAAAGG+TGG + Chr1:73748333-73748352 MsG0180004130.01.T01:intron 25.0%
! GTAATTTAGTGTCAACTATT+TGG - Chr1:73748985-73749004 None:intergenic 25.0%
! GTACAAATTTCCTAACAAAA+GGG + Chr1:73749340-73749359 MsG0180004130.01.T01:intron 25.0%
! GTTAATTCAATTTAGTAGCT+TGG + Chr1:73749582-73749601 MsG0180004130.01.T01:intron 25.0%
! TAAAATAAGCTAATCCAAAC+AGG + Chr1:73752492-73752511 MsG0180004130.01.T01:intron 25.0%
! TAAATATTGGAGTAGAAGAA+GGG - Chr1:73747286-73747305 None:intergenic 25.0%
! TAAATTTCAATTTGTGCAGA+GGG + Chr1:73752604-73752623 MsG0180004130.01.T01:intron 25.0%
! TGAACCTATCAAAATCATTA+AGG - Chr1:73751869-73751888 None:intergenic 25.0%
! TTAAATTTCAATTTGTGCAG+AGG + Chr1:73752603-73752622 MsG0180004130.01.T01:intron 25.0%
! TTGTTGTATAAGTAAAGATG+AGG + Chr1:73751076-73751095 MsG0180004130.01.T01:intron 25.0%
! TTGTTTGATCAAAACTTGAA+GGG - Chr1:73749874-73749893 None:intergenic 25.0%
! TTTAATTATCTAGTTGTAGG+TGG + Chr1:73750536-73750555 MsG0180004130.01.T01:intron 25.0%
! TTTCTTGAACAAATCAACTT+GGG - Chr1:73747116-73747135 None:intergenic 25.0%
!! AATATTTTCTTTTACGTGGT+TGG + Chr1:73747859-73747878 MsG0180004130.01.T01:intron 25.0%
!! AGCTGAAATTTAAAGCTAAA+TGG + Chr1:73749560-73749579 MsG0180004130.01.T01:intron 25.0%
!! ATTAGAATGGTGATTAGTTA+TGG - Chr1:73748255-73748274 None:intergenic 25.0%
!! GAAGCACTAAAAAAAGAAAA+AGG - Chr1:73746909-73746928 None:intergenic 25.0%
!! TATGCAATCAAAAGCATAAA+TGG - Chr1:73752762-73752781 None:intergenic 25.0%
!! TGAGTCTAAGTTTTTCTTTT+TGG + Chr1:73749626-73749645 MsG0180004130.01.T01:intron 25.0%
!! TTGCATTTTATAGTGTAAGT+GGG + Chr1:73752076-73752095 MsG0180004130.01.T01:intron 25.0%
!! TTGTGATGTTTTATAAAGAG+GGG - Chr1:73751183-73751202 None:intergenic 25.0%
!! TTTGAATGTGTATGTCTTTT+AGG - Chr1:73750870-73750889 None:intergenic 25.0%
!! TTTGCATTTTATAGTGTAAG+TGG + Chr1:73752075-73752094 MsG0180004130.01.T01:intron 25.0%
!!! CCTTTTAATTCGAATTCATT+TGG - Chr1:73749132-73749151 None:intergenic 25.0%
!!! TACTCTAAAATGTTGTCAAA+TGG - Chr1:73748174-73748193 None:intergenic 25.0%
!!! TATAGGTGTTGAGTAAAAAA+TGG - Chr1:73749733-73749752 None:intergenic 25.0%
!!! TTGTTTTTCAAATTGTGTCT+AGG + Chr1:73752543-73752562 MsG0180004130.01.T01:intron 25.0%
!!! TTTTGTTTGACGGATTTTAT+GGG - Chr1:73749022-73749041 None:intergenic 25.0%
!!! TTTTTGTTTGACGGATTTTA+TGG - Chr1:73749023-73749042 None:intergenic 25.0%
AAAAGGATAACCCTTAAAAG+GGG + Chr1:73749039-73749058 MsG0180004130.01.T01:intron 30.0%
AAATATTGGAGTAGAAGAAG+GGG - Chr1:73747285-73747304 None:intergenic 30.0%
AAATCCATTTCAAAATTGGC+AGG + Chr1:73750586-73750605 MsG0180004130.01.T01:intron 30.0%
AACATGTCATGTGGTTAAAT+TGG + Chr1:73747796-73747815 MsG0180004130.01.T01:intron 30.0%
AATCCATTTCAAAATTGGCA+GGG + Chr1:73750587-73750606 MsG0180004130.01.T01:intron 30.0%
AATTGATTGTTAAGAAGAGG+AGG + Chr1:73751838-73751857 MsG0180004130.01.T01:CDS 30.0%
ACGAAAAATCAAGAATAGGA+AGG + Chr1:73747048-73747067 MsG0180004130.01.T01:intron 30.0%
AGAGTTCTCAGTACTATTAT+TGG - Chr1:73747449-73747468 None:intergenic 30.0%
AGGGGATAAAAATACTTTGT+AGG - Chr1:73748067-73748086 None:intergenic 30.0%
AGGTATATTCTTCATGTAGT+TGG + Chr1:73747498-73747517 MsG0180004130.01.T01:intron 30.0%
ATATTCTTCATGTAGTTGGA+AGG + Chr1:73747502-73747521 MsG0180004130.01.T01:intron 30.0%
ATGGAGATACAATGTTTGTT+AGG - Chr1:73752256-73752275 None:intergenic 30.0%
ATTGATTGTTAAGAAGAGGA+GGG + Chr1:73751839-73751858 MsG0180004130.01.T01:CDS 30.0%
CAAAAAGGATAACCCTTAAA+AGG + Chr1:73749037-73749056 MsG0180004130.01.T01:intron 30.0%
GAAGACATAATATCTTGAAC+TGG - Chr1:73747595-73747614 None:intergenic 30.0%
GAGGGGTTTATATATAAGAA+CGG + Chr1:73748582-73748601 MsG0180004130.01.T01:intron 30.0%
GATAATTAAAAAGGGCAACT+CGG - Chr1:73750526-73750545 None:intergenic 30.0%
GATTAAATTGTGGGTGTATT+TGG - Chr1:73750660-73750679 None:intergenic 30.0%
GGAAATTGATTGTTAAGAAG+AGG + Chr1:73751835-73751854 MsG0180004130.01.T01:CDS 30.0%
GGACTTTGAATAACAAGTTA+AGG - Chr1:73749536-73749555 None:intergenic 30.0%
GGATGAAAATGGAAAAAGAT+TGG - Chr1:73751478-73751497 None:intergenic 30.0%
GGTACAAATTTCCTAACAAA+AGG + Chr1:73749339-73749358 MsG0180004130.01.T01:intron 30.0%
GTAAATATTGGAGTAGAAGA+AGG - Chr1:73747287-73747306 None:intergenic 30.0%
GTCTAACGAGATGAATAAAT+CGG - Chr1:73747559-73747578 None:intergenic 30.0%
GTGTTGAGTAAAAAATGGAT+TGG - Chr1:73749728-73749747 None:intergenic 30.0%
TAAGGTTCATAAATTTGTGG+AGG + Chr1:73746963-73746982 MsG0180004130.01.T01:intron 30.0%
TAAGTGCTAACATTCTCTAT+AGG + Chr1:73747240-73747259 MsG0180004130.01.T01:intron 30.0%
TATTCTTCATGTAGTTGGAA+GGG + Chr1:73747503-73747522 MsG0180004130.01.T01:intron 30.0%
TCATTTGTGAAGTTTGGTAT+TGG - Chr1:73747770-73747789 None:intergenic 30.0%
TGAAGAGAACTCAATTCATT+TGG - Chr1:73749787-73749806 None:intergenic 30.0%
TGATAGGTTCAAGATTATGT+TGG + Chr1:73751878-73751897 MsG0180004130.01.T01:CDS 30.0%
TGTATAAGTAAAGATGAGGT+GGG + Chr1:73751080-73751099 MsG0180004130.01.T01:intron 30.0%
TTATATTTGCCGAAGATGAA+TGG - Chr1:73749843-73749862 None:intergenic 30.0%
TTGTATAAGTAAAGATGAGG+TGG + Chr1:73751079-73751098 MsG0180004130.01.T01:intron 30.0%
TTGTGAAATGCTCTTAAGTT+GGG + Chr1:73752029-73752048 MsG0180004130.01.T01:intron 30.0%
TTTAGCCAATCAAAAGTCAA+CGG - Chr1:73748405-73748424 None:intergenic 30.0%
! AACACCAAAAGTGCAAATTA+AGG + Chr1:73746945-73746964 MsG0180004130.01.T01:intron 30.0%
! AGCTAATCTAACTACTGATT+TGG + Chr1:73750197-73750216 MsG0180004130.01.T01:intron 30.0%
! ATATGGAAATAATGGAGAGA+GGG - Chr1:73749946-73749965 None:intergenic 30.0%
! ATTTCTCCACCATCTTTTTA+TGG + Chr1:73748786-73748805 MsG0180004130.01.T01:intron 30.0%
! CTAACTTTTCCATTCATCTT+CGG + Chr1:73749831-73749850 MsG0180004130.01.T01:intron 30.0%
! TATATGGAAATAATGGAGAG+AGG - Chr1:73749947-73749966 None:intergenic 30.0%
! TGCATTTTATAGTGTAAGTG+GGG + Chr1:73752077-73752096 MsG0180004130.01.T01:intron 30.0%
! TGGAGATACAATGTTTGTTA+GGG - Chr1:73752255-73752274 None:intergenic 30.0%
! TTGCAAGTTCACATTTTGTT+TGG - Chr1:73746876-73746895 None:intergenic 30.0%
!! ACTTTTATTTAGCGTCTGTT+TGG + Chr1:73749979-73749998 MsG0180004130.01.T01:intron 30.0%
!! AGAAGAGTGTTGTCAAAATT+AGG - Chr1:73751210-73751229 None:intergenic 30.0%
!! AGCTTTAAATTTCAGCTAAG+AGG - Chr1:73749557-73749576 None:intergenic 30.0%
!! ATATGATCTGAGGTGAATTT+TGG - Chr1:73749299-73749318 None:intergenic 30.0%
!! ATTGATGATGAAGTGAACTT+AGG + Chr1:73747478-73747497 MsG0180004130.01.T01:intron 30.0%
!! CTAAACACACCATTGATTTA+CGG - Chr1:73750077-73750096 None:intergenic 30.0%
!! GAAGAGTGTTGTCAAAATTA+GGG - Chr1:73751209-73751228 None:intergenic 30.0%
!!! CTAGAGGTTTTATTCGTATT+AGG + Chr1:73752829-73752848 MsG0180004130.01.T01:three_prime_UTR 30.0%
!!! CTTTTTTAAATTGAGGCTCA+AGG - Chr1:73748314-73748333 None:intergenic 30.0%
!!! TGAACCTTAATTTGCACTTT+TGG - Chr1:73746952-73746971 None:intergenic 30.0%
!!! TTGTGATTTGTTTGTTTTGC+AGG + Chr1:73751529-73751548 MsG0180004130.01.T01:intron 30.0%
AAACCCTACATACTCAACTA+AGG - Chr1:73752519-73752538 None:intergenic 35.0%
AAAGGATAACCCTTAAAAGG+GGG + Chr1:73749040-73749059 MsG0180004130.01.T01:intron 35.0%
AACAAGTTAAGGTCAAGTTC+TGG - Chr1:73749525-73749544 None:intergenic 35.0%
AACCCTACATACTCAACTAA+GGG - Chr1:73752518-73752537 None:intergenic 35.0%
AATCAGACATCTTCATCTCA+AGG + Chr1:73749910-73749929 MsG0180004130.01.T01:intron 35.0%
ACAAAATGTGAACTTGCAAG+AGG + Chr1:73746877-73746896 MsG0180004130.01.T01:CDS 35.0%
ACAGAGTTGGGATTAAATTG+TGG - Chr1:73750670-73750689 None:intergenic 35.0%
AGACTCAAAGATATACCCTT+GGG - Chr1:73749613-73749632 None:intergenic 35.0%
AGCTTCTCTAACACGTTTAT+GGG - Chr1:73748228-73748247 None:intergenic 35.0%
AGGTTTCTGCTAAGATTTCT+AGG + Chr1:73750239-73750258 MsG0180004130.01.T01:CDS 35.0%
ATCAAGTGTGCTAAGATGTT+TGG - Chr1:73750905-73750924 None:intergenic 35.0%
ATCTCAACAAACCTCTTGAA+CGG - Chr1:73751357-73751376 None:intergenic 35.0%
ATTAAACCTACATCATGGAC+TGG + Chr1:73749272-73749291 MsG0180004130.01.T01:intron 35.0%
CAAGTCTTTCAAGAAACACA+TGG - Chr1:73747694-73747713 None:intergenic 35.0%
CAATTTAATCCCAACTCTGT+TGG + Chr1:73750670-73750689 MsG0180004130.01.T01:CDS 35.0%
CAGAGTTGGGATTAAATTGT+GGG - Chr1:73750669-73750688 None:intergenic 35.0%
CGTACAATACACTAAATGGT+GGG + Chr1:73750460-73750479 MsG0180004130.01.T01:intron 35.0%
CTCTTGTGTAAAACAGAGTA+AGG + Chr1:73750434-73750453 MsG0180004130.01.T01:intron 35.0%
GAAAGCCTCTTGAAATTGAT+TGG - Chr1:73751587-73751606 None:intergenic 35.0%
GACAAGTCATTTGTGAAGTT+TGG - Chr1:73747776-73747795 None:intergenic 35.0%
GATAGATGTGAAGAACAAGT+GGG + Chr1:73751794-73751813 MsG0180004130.01.T01:intron 35.0%
GATTATGTTGGCCAAGATTA+AGG + Chr1:73751890-73751909 MsG0180004130.01.T01:CDS 35.0%
GATTGATTGTTTGTGTTGCA+GGG - Chr1:73750829-73750848 None:intergenic 35.0%
GGGTTTATATATAAGAACGG+AGG + Chr1:73748585-73748604 MsG0180004130.01.T01:intron 35.0%
GTATAAGTAAAGATGAGGTG+GGG + Chr1:73751081-73751100 MsG0180004130.01.T01:intron 35.0%
GTCTATGAAAAAACGGCTTA+TGG - Chr1:73752275-73752294 None:intergenic 35.0%
GTTGTGAAATGCTCTTAAGT+TGG + Chr1:73752028-73752047 MsG0180004130.01.T01:intron 35.0%
TAAAAGTAAAAACGGGTCAG+TGG - Chr1:73747147-73747166 None:intergenic 35.0%
TAAATAATTGTGAACGGCAG+AGG - Chr1:73748812-73748831 None:intergenic 35.0%
TAACGAGATGAATAAATCGG+AGG - Chr1:73747556-73747575 None:intergenic 35.0%
TACTTGAGTTATCTTGAGAG+AGG + Chr1:73750009-73750028 MsG0180004130.01.T01:intron 35.0%
TAGACTCAAAGATATACCCT+TGG - Chr1:73749614-73749633 None:intergenic 35.0%
TATCTTGAACTGGGTAATGA+TGG - Chr1:73747585-73747604 None:intergenic 35.0%
TCAAAGATTAAGGGTCTGTT+TGG - Chr1:73752366-73752385 None:intergenic 35.0%
TCAACTATTTGGAGATGACT+TGG - Chr1:73748974-73748993 None:intergenic 35.0%
TGATAGATGTGAAGAACAAG+TGG + Chr1:73751793-73751812 MsG0180004130.01.T01:intron 35.0%
TGATGTTATCGACCAAACTA+GGG + Chr1:73751434-73751453 MsG0180004130.01.T01:CDS 35.0%
TGCCAAGGAAGAAGAAAAAA+AGG + Chr1:73749702-73749721 MsG0180004130.01.T01:intron 35.0%
TGCTCTATGTGCATTTGATT+TGG - Chr1:73750632-73750651 None:intergenic 35.0%
TGTCTTCGTTGATGTATGTA+TGG + Chr1:73747608-73747627 MsG0180004130.01.T01:intron 35.0%
TTAGCCAATCAAAAGTCAAC+GGG - Chr1:73748404-73748423 None:intergenic 35.0%
TTCTCATAACCCAATTCAAG+CGG - Chr1:73752186-73752205 None:intergenic 35.0%
TTGATGTTATCGACCAAACT+AGG + Chr1:73751433-73751452 MsG0180004130.01.T01:CDS 35.0%
! AGAAATTAAGCAAATGGGCT+AGG - Chr1:73751499-73751518 None:intergenic 35.0%
! ATTAAGTTGTCTATCCAAGC+AGG - Chr1:73751972-73751991 None:intergenic 35.0%
! ATTCATTCTTCCCCCTTTTA+AGG - Chr1:73749053-73749072 None:intergenic 35.0%
! CATAAATATTCACGGCCTTT+TGG - Chr1:73748755-73748774 None:intergenic 35.0%
! CTTACTCTGTTTTACACAAG+AGG - Chr1:73750436-73750455 None:intergenic 35.0%
! GGCTACAAAGTTGGTTTAAT+GGG - Chr1:73749680-73749699 None:intergenic 35.0%
! TCACCATTTTCGATTTTCTG+AGG - Chr1:73751256-73751275 None:intergenic 35.0%
! TGGCTACAAAGTTGGTTTAA+TGG - Chr1:73749681-73749700 None:intergenic 35.0%
! TTAAGTTGTCTATCCAAGCA+GGG - Chr1:73751971-73751990 None:intergenic 35.0%
! TTCATTCTTCCCCCTTTTAA+GGG - Chr1:73749052-73749071 None:intergenic 35.0%
! TTCTGCTAAGATTTCTAGGA+AGG + Chr1:73750243-73750262 MsG0180004130.01.T01:CDS 35.0%
! TTTTCTTTTACGTGGTTGGA+TGG + Chr1:73747863-73747882 MsG0180004130.01.T01:intron 35.0%
!! ATCTAACTACTGATTTGGAC+AGG + Chr1:73750202-73750221 MsG0180004130.01.T01:intron 35.0%
!! CTGCCCTTAATGATTTTGAT+AGG + Chr1:73751862-73751881 MsG0180004130.01.T01:CDS 35.0%
!! GGGTTATCCTTTTTGTTTGA+CGG - Chr1:73749032-73749051 None:intergenic 35.0%
!! TGTTTTATAAAGAGGGGCAT+TGG - Chr1:73751177-73751196 None:intergenic 35.0%
!! TTCAAGAGGTTTGTTGAGAT+CGG + Chr1:73751357-73751376 MsG0180004130.01.T01:CDS 35.0%
!! TTGTATTTTGAGTACGTACG+AGG + Chr1:73747734-73747753 MsG0180004130.01.T01:intron 35.0%
!! TTTTGACTAGTAAATCGGAG+AGG + Chr1:73746986-73747005 MsG0180004130.01.T01:intron 35.0%
!!! AAATCCCGTTGACTTTTGAT+TGG + Chr1:73748397-73748416 MsG0180004130.01.T01:intron 35.0%
!!! GGAGGTTTTGACTAGTAAAT+CGG + Chr1:73746981-73747000 MsG0180004130.01.T01:intron 35.0%
!!! TTTGGATTGGCTTCTTTTTG+AGG - Chr1:73752348-73752367 None:intergenic 35.0%
AAAGAAAGGGAAATCGCACA+AGG - Chr1:73749468-73749487 None:intergenic 40.0%
AACAATCAATTTCCTTCCCC+AGG - Chr1:73751829-73751848 None:intergenic 40.0%
AACATTCTCTATAGGAGGAG+AGG + Chr1:73747248-73747267 MsG0180004130.01.T01:intron 40.0%
ACATTCTCTATAGGAGGAGA+GGG + Chr1:73747249-73747268 MsG0180004130.01.T01:intron 40.0%
AGAGTTGCACTTGTCAACTA+TGG + Chr1:73751381-73751400 MsG0180004130.01.T01:CDS 40.0%
ATATAGCAGCTTGCAAGTAG+GGG - Chr1:73748085-73748104 None:intergenic 40.0%
ATCAAGCAAGAAAGAGCTAG+AGG + Chr1:73752813-73752832 MsG0180004130.01.T01:three_prime_UTR 40.0%
ATGAAGTAATGCCTAAGCTG+CGG - Chr1:73752669-73752688 None:intergenic 40.0%
CACTATGAAGCGTAACCAAA+AGG + Chr1:73748737-73748756 MsG0180004130.01.T01:intron 40.0%
CATATAGCAGCTTGCAAGTA+GGG - Chr1:73748086-73748105 None:intergenic 40.0%
CGTCTAAACATGCAAGTTAC+TGG - Chr1:73747401-73747420 None:intergenic 40.0%
CTAAACATGCAAGTTACTGG+TGG - Chr1:73747398-73747417 None:intergenic 40.0%
GACATGTCCATAAACTCTTC+AGG + Chr1:73750049-73750068 MsG0180004130.01.T01:intron 40.0%
GAGCTCCAATCAATTTCAAG+AGG + Chr1:73751579-73751598 MsG0180004130.01.T01:CDS 40.0%
GAGCTTCTCTAACACGTTTA+TGG - Chr1:73748229-73748248 None:intergenic 40.0%
GATTAAGGGTCTGTTTGGAT+TGG - Chr1:73752361-73752380 None:intergenic 40.0%
GCGTACAATACACTAAATGG+TGG + Chr1:73750459-73750478 MsG0180004130.01.T01:intron 40.0%
GCTGCGTACAATACACTAAA+TGG + Chr1:73750456-73750475 MsG0180004130.01.T01:intron 40.0%
GGATTGATTGTTTGTGTTGC+AGG - Chr1:73750830-73750849 None:intergenic 40.0%
GTCAACTATGGTCCAGATTA+TGG + Chr1:73751393-73751412 MsG0180004130.01.T01:CDS 40.0%
GTGCCTCAGAAAATCGAAAA+TGG + Chr1:73751250-73751269 MsG0180004130.01.T01:intron 40.0%
GTGCTAACATTCTCTATAGG+AGG + Chr1:73747243-73747262 MsG0180004130.01.T01:intron 40.0%
GTGTAAAACAGAAGCTACTG+AGG - Chr1:73748485-73748504 None:intergenic 40.0%
TACAACTCCGATTCATGACT+TGG + Chr1:73752952-73752971 MsG0180004130.01.T01:three_prime_UTR 40.0%
TATTGGCACATCATCTGCAA+TGG - Chr1:73747432-73747451 None:intergenic 40.0%
TCATATAGCAGCTTGCAAGT+AGG - Chr1:73748087-73748106 None:intergenic 40.0%
TCTCATAACCCAATTCAAGC+GGG - Chr1:73752185-73752204 None:intergenic 40.0%
TGTCTGTGAGTACTTATGTG+TGG - Chr1:73752443-73752462 None:intergenic 40.0%
TGTGGTTAAATTGGTCAGCT+TGG + Chr1:73747805-73747824 MsG0180004130.01.T01:intron 40.0%
TTGACGAGATCCTTCTTCTT+GGG - Chr1:73751644-73751663 None:intergenic 40.0%
TTGGATGGAGTTAAAGATCG+TGG + Chr1:73747878-73747897 MsG0180004130.01.T01:intron 40.0%
TTTGACGAGATCCTTCTTCT+TGG - Chr1:73751645-73751664 None:intergenic 40.0%
TTTGCAGCTTGTAGTTCAAG+TGG + Chr1:73751991-73752010 MsG0180004130.01.T01:intron 40.0%
! CAGACAGTCTTACATGCTTT+TGG + Chr1:73752457-73752476 MsG0180004130.01.T01:intron 40.0%
! CTACATGTACTGACACATGT+TGG - Chr1:73750103-73750122 None:intergenic 40.0%
! GATTTCTAGGAAGGAAGAGA+AGG + Chr1:73750252-73750271 MsG0180004130.01.T01:CDS 40.0%
! TGACTTGTCAACATGTCATG+TGG + Chr1:73747787-73747806 MsG0180004130.01.T01:intron 40.0%
! TTTTTCTTCTTCCTTGGCAC+TGG - Chr1:73749701-73749720 None:intergenic 40.0%
!! ACTGATTTGGACAGGCATTT+AGG + Chr1:73750210-73750229 MsG0180004130.01.T01:intron 40.0%
!! ATAAAGAGGGGCATTGGAAT+GGG - Chr1:73751171-73751190 None:intergenic 40.0%
!! CAAATGGGCTAGGATGAAAA+TGG - Chr1:73751489-73751508 None:intergenic 40.0%
!! CACATTTTGCGTCGATAATC+TGG - Chr1:73750735-73750754 None:intergenic 40.0%
!! GAAAATGGGTTACCCTAGTT+TGG - Chr1:73751449-73751468 None:intergenic 40.0%
!! GATGGTGGAGAAATGACAAA+TGG - Chr1:73748780-73748799 None:intergenic 40.0%
!! TAGGTTTGACTTGACACTCA+GGG - Chr1:73750851-73750870 None:intergenic 40.0%
!! TATAAAGAGGGGCATTGGAA+TGG - Chr1:73751172-73751191 None:intergenic 40.0%
!! TGACCCTGCCAATTTTGAAA+TGG - Chr1:73750593-73750612 None:intergenic 40.0%
!! TTAGGTTTGACTTGACACTC+AGG - Chr1:73750852-73750871 None:intergenic 40.0%
!! TTGGAGATGACTTGGTCAAT+CGG - Chr1:73748966-73748985 None:intergenic 40.0%
!!! GGCCTTTTTTTCTTCTTCCT+TGG - Chr1:73749707-73749726 None:intergenic 40.0%
AAAGGGAAATCGCACAAGGT+TGG - Chr1:73749464-73749483 None:intergenic 45.0%
AATTCTACCTGCAGCTTCCA+TGG - Chr1:73751669-73751688 None:intergenic 45.0%
ACAACGAGCTTGCCATAATC+TGG - Chr1:73751408-73751427 None:intergenic 45.0%
ACATCATCTGCAATGGAGCA+TGG - Chr1:73747425-73747444 None:intergenic 45.0%
AGGCCCTTAGTTGAGTATGT+AGG + Chr1:73752512-73752531 MsG0180004130.01.T01:intron 45.0%
AGTAGCTTGGGAATTCCCAA+GGG + Chr1:73749595-73749614 MsG0180004130.01.T01:intron 45.0%
ATCCATGAAGGCTTCTTTGC+TGG - Chr1:73750284-73750303 None:intergenic 45.0%
ATTGGAATGGGCCTTTGTTC+GGG - Chr1:73751159-73751178 None:intergenic 45.0%
CAAGAGAGTTCCCAAGAAGA+AGG + Chr1:73751631-73751650 MsG0180004130.01.T01:CDS 45.0%
CACAGTGGAGAAGATGACAA+AGG - Chr1:73747340-73747359 None:intergenic 45.0%
CAGAGGCCATAAAAAGATGG+TGG - Chr1:73748795-73748814 None:intergenic 45.0%
CAGCTAATGCCAACAGAGTT+GGG - Chr1:73750682-73750701 None:intergenic 45.0%
CATTGGAATGGGCCTTTGTT+CGG - Chr1:73751160-73751179 None:intergenic 45.0%
CGACGTATCAGTGTTGTGTT+TGG + Chr1:73750157-73750176 MsG0180004130.01.T01:intron 45.0%
GGCCCTTAGTTGAGTATGTA+GGG + Chr1:73752513-73752532 MsG0180004130.01.T01:intron 45.0%
GTAACACATGCCAGCAAAGA+AGG + Chr1:73750311-73750330 MsG0180004130.01.T01:intron 45.0%
TACGGTGCCTGAAGAGTTTA+TGG - Chr1:73750059-73750078 None:intergenic 45.0%
TACTCAACTAAGGGCCTGTT+TGG - Chr1:73752509-73752528 None:intergenic 45.0%
TAGTAGCTTGGGAATTCCCA+AGG + Chr1:73749594-73749613 MsG0180004130.01.T01:intron 45.0%
TCAGCTAATGCCAACAGAGT+TGG - Chr1:73750683-73750702 None:intergenic 45.0%
TCTGTTGGCATTAGCTGAGA+AGG + Chr1:73750685-73750704 MsG0180004130.01.T01:CDS 45.0%
TCTTGTTGATGCACCTGACA+TGG + Chr1:73751553-73751572 MsG0180004130.01.T01:CDS 45.0%
TCTTTGCTGGCATGTGTTAC+TGG - Chr1:73750311-73750330 None:intergenic 45.0%
TCTTTGTTCAGCCGTTCAAG+AGG + Chr1:73751343-73751362 MsG0180004130.01.T01:intron 45.0%
TGATGTTGCTCCTTCTTTGC+TGG - Chr1:73750324-73750343 None:intergenic 45.0%
TTTCAATTTGTGCAGAGGGC+TGG + Chr1:73752608-73752627 MsG0180004130.01.T01:intron 45.0%
TTTCGTGCAGAGCAAGAACT+TGG + Chr1:73746827-73746846 MsG0180004130.01.T01:CDS 45.0%
TTTGGTCCAGTCCATGATGT+AGG - Chr1:73749281-73749300 None:intergenic 45.0%
! AGAGTCGCAACCCTTTTGTT+AGG - Chr1:73749353-73749372 None:intergenic 45.0%
! CGTCGATAATCTGGAGCATT+TGG - Chr1:73750726-73750745 None:intergenic 45.0%
! CTTCAGGCACCGTAAATCAA+TGG + Chr1:73750065-73750084 MsG0180004130.01.T01:intron 45.0%
! TGTGAACTTGCAAGAGGTAC+TGG + Chr1:73746883-73746902 MsG0180004130.01.T01:intron 45.0%
!! ACATACAACCTGCGTTGACT+TGG - Chr1:73750789-73750808 None:intergenic 45.0%
!! CTCTTAAGTTGGGCCTTGTT+TGG + Chr1:73752039-73752058 MsG0180004130.01.T01:intron 45.0%
!! GACAGGCATTTAGGTTGAGA+AGG + Chr1:73750219-73750238 MsG0180004130.01.T01:intron 45.0%
!! GTTACTGGTGTCATCCATGA+AGG - Chr1:73750296-73750315 None:intergenic 45.0%
!! TGGAAGGGTGTTGATTCACT+TGG + Chr1:73747518-73747537 MsG0180004130.01.T01:intron 45.0%
!!! TTTTAAGTTAGGGCCCTGCT+TGG + Chr1:73751955-73751974 MsG0180004130.01.T01:intron 45.0%
!! AAATAAAAATAGAATAAAAA+TGG + Chr1:73749396-73749415 MsG0180004130.01.T01:intron 5.0%
!! ATTTAAAAAAGTAAAAATAA+AGG + Chr1:73748323-73748342 MsG0180004130.01.T01:intron 5.0%
!!! AATTAAATTTTAAATGATTT+TGG - Chr1:73751016-73751035 None:intergenic 5.0%
AATGGGCCTTTGTTCGGGTA+TGG - Chr1:73751154-73751173 None:intergenic 50.0%
ATGGGCCTTTGTTCGGGTAT+GGG - Chr1:73751153-73751172 None:intergenic 50.0%
ATGTCTTGCCAAGTCAACGC+AGG + Chr1:73750778-73750797 MsG0180004130.01.T01:intron 50.0%
ATTGGAGCTCTCTCCATGTC+AGG - Chr1:73751569-73751588 None:intergenic 50.0%
CAACTTTGTAGCCAGTGCCA+AGG + Chr1:73749687-73749706 MsG0180004130.01.T01:intron 50.0%
CATATGCAAGGTCCAGGAAG+GGG - Chr1:73750487-73750506 None:intergenic 50.0%
CGGCAGAGGCCATAAAAAGA+TGG - Chr1:73748798-73748817 None:intergenic 50.0%
CTTCCTGGACCTTGCATATG+CGG + Chr1:73750487-73750506 MsG0180004130.01.T01:intron 50.0%
CTTCTCCACTGTGAGAAGCA+TGG + Chr1:73747347-73747366 MsG0180004130.01.T01:intron 50.0%
GAAGGATCTCGTCAAAGCCA+TGG + Chr1:73751649-73751668 MsG0180004130.01.T01:CDS 50.0%
GCATATGCAAGGTCCAGGAA+GGG - Chr1:73750488-73750507 None:intergenic 50.0%
GTCTCAAATCAAACCGCCTG+TGG + Chr1:73748555-73748574 MsG0180004130.01.T01:intron 50.0%
TGCCAGCAAAGAAGCCTTCA+TGG + Chr1:73750279-73750298 MsG0180004130.01.T01:CDS 50.0%
TTCCTGGACCTTGCATATGC+GGG + Chr1:73750488-73750507 MsG0180004130.01.T01:intron 50.0%
!! CTTGGCACTGGCTACAAAGT+TGG - Chr1:73749689-73749708 None:intergenic 50.0%
!! CTTTAGGGCCCGCTTGAATT+GGG + Chr1:73752174-73752193 MsG0180004130.01.T01:intron 50.0%
!! GGCAAGAACTTGCTAAGCTG+AGG + Chr1:73752639-73752658 MsG0180004130.01.T01:CDS 50.0%
AAATCAAACCGCCTGTGGCG+TGG + Chr1:73748560-73748579 MsG0180004130.01.T01:intron 55.0%
AAGTGGGAGAAGAGCTCCTG+GGG + Chr1:73751810-73751829 MsG0180004130.01.T01:CDS 55.0%
ACAAGTGGGAGAAGAGCTCC+TGG + Chr1:73751808-73751827 MsG0180004130.01.T01:CDS 55.0%
CAAGTGGGAGAAGAGCTCCT+GGG + Chr1:73751809-73751828 MsG0180004130.01.T01:CDS 55.0%
CACTGCCATGCTTCTCACAG+TGG - Chr1:73747355-73747374 None:intergenic 55.0%
CGCATATGCAAGGTCCAGGA+AGG - Chr1:73750489-73750508 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+AGG - Chr1:73750499-73750518 None:intergenic 55.0%
GGCACTCGCAGCTGAAACAA+AGG - Chr1:73751235-73751254 None:intergenic 55.0%
GTCAAAGCCATGGAAGCTGC+AGG + Chr1:73751659-73751678 MsG0180004130.01.T01:CDS 55.0%
TATAAACCCCTCCACGCCAC+AGG - Chr1:73748574-73748593 None:intergenic 55.0%
TTGGGCCCATACCCGAACAA+AGG + Chr1:73751145-73751164 MsG0180004130.01.T01:intron 55.0%
! TAAATGGTGGGACCCCTTCC+TGG + Chr1:73750472-73750491 MsG0180004130.01.T01:intron 55.0%
!! GCTTTAGGGCCCGCTTGAAT+TGG + Chr1:73752173-73752192 MsG0180004130.01.T01:intron 55.0%
!! TGCAGAGGGCTGGTGTTGTT+AGG + Chr1:73752618-73752637 MsG0180004130.01.T01:intron 55.0%
CTCCCGCATATGCAAGGTCC+AGG - Chr1:73750493-73750512 None:intergenic 60.0%
GCTGAGGAAGACCGCAGCTT+AGG + Chr1:73752655-73752674 MsG0180004130.01.T01:CDS 60.0%
AAACCCCTCCACGCCACAGG+CGG - Chr1:73748571-73748590 None:intergenic 65.0%
AAACCGCCTGTGGCGTGGAG+GGG + Chr1:73748565-73748584 MsG0180004130.01.T01:intron 65.0%
CAAACCGCCTGTGGCGTGGA+GGG + Chr1:73748564-73748583 MsG0180004130.01.T01:intron 65.0%
GGGAGAAGAGCTCCTGGGGA+AGG + Chr1:73751814-73751833 MsG0180004130.01.T01:CDS 65.0%
TCAAACCGCCTGTGGCGTGG+AGG + Chr1:73748563-73748582 MsG0180004130.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 73746821 73752975 73746821 ID=MsG0180004130.01;Name=MsG0180004130.01
Chr1 mRNA 73746821 73752975 73746821 ID=MsG0180004130.01.T01;Parent=MsG0180004130.01;Name=MsG0180004130.01.T01;_AED=0.46;_eAED=0.56;_QI=0|0.5|0.57|1|0.66|0.71|7|299|220
Chr1 exon 73746821 73746898 73746821 ID=MsG0180004130.01.T01:exon:5361;Parent=MsG0180004130.01.T01
Chr1 exon 73750224 73750310 73750224 ID=MsG0180004130.01.T01:exon:5362;Parent=MsG0180004130.01.T01
Chr1 exon 73750608 73750706 73750608 ID=MsG0180004130.01.T01:exon:5363;Parent=MsG0180004130.01.T01
Chr1 exon 73751354 73751455 73751354 ID=MsG0180004130.01.T01:exon:5364;Parent=MsG0180004130.01.T01
Chr1 exon 73751551 73751680 73751551 ID=MsG0180004130.01.T01:exon:5365;Parent=MsG0180004130.01.T01
Chr1 exon 73751799 73751911 73751799 ID=MsG0180004130.01.T01:exon:5366;Parent=MsG0180004130.01.T01
Chr1 exon 73752623 73752975 73752623 ID=MsG0180004130.01.T01:exon:5367;Parent=MsG0180004130.01.T01
Chr1 CDS 73746821 73746898 73746821 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73750224 73750310 73750224 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73750608 73750706 73750608 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73751354 73751455 73751354 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73751551 73751680 73751551 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73751799 73751911 73751799 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 CDS 73752623 73752676 73752623 ID=MsG0180004130.01.T01:cds;Parent=MsG0180004130.01.T01
Chr1 three_prime_UTR 73752677 73752975 73752677 ID=MsG0180004130.01.T01:three_prime_utr;Parent=MsG0180004130.01.T01
Gene Sequence

>MsG0180004130.01.T01

ATGATGTTTCGTGCAGAGCAAGAACTTGGTGTGCTCAAAATATTTATTATATCCAAACAAAATGTGAACTTGCAAGAGGCATTTAGGTTGAGAAGGTTTCTGCTAAGATTTCTAGGAAGGAAGAGAAGGCTCATGCCAGCAAAGAAGCCTTCATGGATGACACCAGGTCAAGCTGTAGCTAGTGTACCAAATCAAATGCACATAGAGCAAAATTCCAAATACACCCACAATTTAATCCCAACTCTGTTGGCATTAGCTGAGAAGCCGTTCAAGAGGTTTGTTGAGATCGGAAGAGTTGCACTTGTCAACTATGGTCCAGATTATGGCAAGCTCGTTGTTATCGTTGATGTTATCGACCAAACTAGGGCTCTTGTTGATGCACCTGACATGGAGAGAGCTCCAATCAATTTCAAGAGGCTTTCTCTAACTGATATCAAGATTGATATCAAGAGAGTTCCCAAGAAGAAGGATCTCGTCAAAGCCATGGAAGCTGCAGATGTGAAGAACAAGTGGGAGAAGAGCTCCTGGGGAAGGAAATTGATTGTTAAGAAGAGGAGGGCTGCCCTTAATGATTTTGATAGGTTCAAGATTATGTTGGCCAAGATTAAGAGGGCTGGTGTTGTTAGGCAAGAACTTGCTAAGCTGAGGAAGACCGCAGCTTAG

Protein sequence

>MsG0180004130.01.T01

MMFRAEQELGVLKIFIISKQNVNLQEAFRLRRFLLRFLGRKRRLMPAKKPSWMTPGQAVASVPNQMHIEQNSKYTHNLIPTLLALAEKPFKRFVEIGRVALVNYGPDYGKLVVIVDVIDQTRALVDAPDMERAPINFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWEKSSWGRKLIVKKRRAALNDFDRFKIMLAKIKRAGVVRQELAKLRKTAA*