Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027319.01.T01 | XP_003614502.1 | 97.701 | 87 | 2 | 0 | 3 | 89 | 70 | 156 | 1.77E-56 | 181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027319.01.T01 | Q9SX29 | 86.207 | 87 | 12 | 0 | 3 | 89 | 73 | 159 | 1.43E-52 | 164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027319.01.T01 | G7JYE1 | 97.701 | 87 | 2 | 0 | 3 | 89 | 70 | 156 | 8.43e-57 | 181 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0580027319.01 | -0.819713 | 1.005391e-52 | 7.796346e-50 |
MsG0080048058.01 | MsG0580027319.01 | -0.804599 | 1.999425e-49 | 1.035182e-46 |
MsG0080048765.01 | MsG0580027319.01 | -0.802948 | 4.403045e-49 | 2.184953e-46 |
MsG0080048968.01 | MsG0580027319.01 | -0.822059 | 2.900670e-53 | 2.401561e-50 |
MsG0180000197.01 | MsG0580027319.01 | -0.841857 | 3.684859e-58 | 5.485631e-55 |
MsG0180000235.01 | MsG0580027319.01 | -0.801032 | 1.090097e-48 | 5.153193e-46 |
MsG0180000295.01 | MsG0580027319.01 | -0.806789 | 6.934869e-50 | 3.798037e-47 |
MsG0180000555.01 | MsG0580027319.01 | -0.828754 | 7.540004e-55 | 7.562938e-52 |
MsG0180000882.01 | MsG0580027319.01 | -0.872038 | 4.322248e-67 | 1.781702e-63 |
MsG0180001237.01 | MsG0580027319.01 | -0.813031 | 3.144114e-51 | 2.030655e-48 |
MsG0180001294.01 | MsG0580027319.01 | -0.838263 | 3.190390e-57 | 4.250016e-54 |
MsG0180001566.01 | MsG0580027319.01 | -0.803823 | 2.900053e-49 | 1.471849e-46 |
MsG0180001922.01 | MsG0580027319.01 | -0.800022 | 1.751203e-48 | 8.068341e-46 |
MsG0180002075.01 | MsG0580027319.01 | -0.821287 | 4.374814e-53 | 3.544166e-50 |
MsG0180002283.01 | MsG0580027319.01 | -0.802050 | 6.742973e-49 | 3.270538e-46 |
MsG0180003073.01 | MsG0580027319.01 | -0.830757 | 2.453852e-55 | 2.609724e-52 |
MsG0180003097.01 | MsG0580027319.01 | -0.813944 | 1.980295e-51 | 1.311019e-48 |
MsG0180003190.01 | MsG0580027319.01 | -0.834698 | 2.578943e-56 | 3.083904e-53 |
MsG0180003303.01 | MsG0580027319.01 | -0.843442 | 1.397796e-58 | 2.187286e-55 |
MsG0180003744.01 | MsG0580027319.01 | -0.810380 | 1.186400e-50 | 7.140159e-48 |
MsG0180003860.01 | MsG0580027319.01 | -0.816069 | 6.687284e-52 | 4.691074e-49 |
MsG0180003984.01 | MsG0580027319.01 | -0.817705 | 2.870960e-52 | 2.106128e-49 |
MsG0180004016.01 | MsG0580027319.01 | -0.805146 | 1.537037e-49 | 8.070974e-47 |
MsG0180004598.01 | MsG0580027319.01 | -0.831364 | 1.740980e-55 | 1.885085e-52 |
MsG0180004645.01 | MsG0580027319.01 | -0.822492 | 2.301174e-53 | 1.929068e-50 |
MsG0180004689.01 | MsG0580027319.01 | -0.839842 | 1.244254e-57 | 1.739742e-54 |
MsG0180004915.01 | MsG0580027319.01 | -0.833866 | 4.168629e-56 | 4.863078e-53 |
MsG0180004991.01 | MsG0580027319.01 | -0.865161 | 7.215843e-65 | 2.324708e-61 |
MsG0180005049.01 | MsG0580027319.01 | -0.810403 | 1.173074e-50 | 7.064204e-48 |
MsG0180005125.01 | MsG0580027319.01 | -0.848130 | 7.458083e-60 | 1.354947e-56 |
MsG0180005443.01 | MsG0580027319.01 | -0.802901 | 4.501737e-49 | 2.231390e-46 |
MsG0180005451.01 | MsG0580027319.01 | -0.805665 | 1.196139e-49 | 6.365281e-47 |
MsG0180005765.01 | MsG0580027319.01 | -0.810780 | 9.720498e-51 | 5.913301e-48 |
MsG0180005944.01 | MsG0580027319.01 | -0.828446 | 8.952211e-55 | 8.900425e-52 |
MsG0180006023.01 | MsG0580027319.01 | -0.805683 | 1.185637e-49 | 6.312612e-47 |
MsG0180006143.01 | MsG0580027319.01 | -0.804128 | 2.506372e-49 | 1.282031e-46 |
MsG0180006155.01 | MsG0580027319.01 | -0.802337 | 5.885253e-49 | 2.875567e-46 |
MsG0280006305.01 | MsG0580027319.01 | -0.848143 | 7.392682e-60 | 1.343589e-56 |
MsG0280006367.01 | MsG0580027319.01 | -0.800948 | 1.134099e-48 | 5.349711e-46 |
MsG0280006368.01 | MsG0580027319.01 | -0.826982 | 2.011731e-54 | 1.916442e-51 |
MsG0280006406.01 | MsG0580027319.01 | -0.825226 | 5.261974e-54 | 4.767497e-51 |
MsG0280010816.01 | MsG0580027319.01 | -0.808598 | 2.863109e-50 | 1.643849e-47 |
MsG0280011423.01 | MsG0580027319.01 | -0.826197 | 3.095185e-54 | 2.882972e-51 |
MsG0380011729.01 | MsG0580027319.01 | -0.812743 | 3.636509e-51 | 2.330803e-48 |
MsG0380012458.01 | MsG0580027319.01 | -0.804089 | 2.553690e-49 | 1.304950e-46 |
MsG0380014162.01 | MsG0580027319.01 | 0.819741 | 9.901894e-53 | 7.684759e-50 |
MsG0380014908.01 | MsG0580027319.01 | -0.817375 | 3.407920e-52 | 2.477591e-49 |
MsG0480018460.01 | MsG0580027319.01 | -0.802245 | 6.147432e-49 | 2.996604e-46 |
MsG0480018846.01 | MsG0580027319.01 | -0.850666 | 1.464975e-60 | 2.891020e-57 |
MsG0480019170.01 | MsG0580027319.01 | -0.807668 | 4.516461e-50 | 2.530633e-47 |
MsG0480019404.01 | MsG0580027319.01 | -0.837812 | 4.166827e-57 | 5.475767e-54 |
MsG0480020242.01 | MsG0580027319.01 | -0.826273 | 2.970243e-54 | 2.772518e-51 |
MsG0480020410.01 | MsG0580027319.01 | 0.824599 | 7.396216e-54 | 6.582564e-51 |
MsG0480020445.01 | MsG0580027319.01 | -0.808814 | 2.574337e-50 | 1.486446e-47 |
MsG0480020530.01 | MsG0580027319.01 | -0.845870 | 3.100424e-59 | 5.239936e-56 |
MsG0480021034.01 | MsG0580027319.01 | -0.802915 | 4.472184e-49 | 2.217514e-46 |
MsG0480021139.01 | MsG0580027319.01 | -0.806425 | 8.276930e-50 | 4.490991e-47 |
MsG0480021432.01 | MsG0580027319.01 | -0.829796 | 4.213007e-55 | 4.357896e-52 |
MsG0480021900.01 | MsG0580027319.01 | -0.813282 | 2.770133e-51 | 1.801290e-48 |
MsG0480021904.01 | MsG0580027319.01 | -0.864554 | 1.118364e-64 | 3.525498e-61 |
MsG0480022228.01 | MsG0580027319.01 | -0.839719 | 1.339217e-57 | 1.865358e-54 |
MsG0480022318.01 | MsG0580027319.01 | -0.831404 | 1.701676e-55 | 1.844671e-52 |
MsG0480022597.01 | MsG0580027319.01 | -0.803715 | 3.054187e-49 | 1.545710e-46 |
MsG0480022678.01 | MsG0580027319.01 | -0.811817 | 5.790970e-51 | 3.620671e-48 |
MsG0480022719.01 | MsG0580027319.01 | -0.808387 | 3.174890e-50 | 1.812993e-47 |
MsG0480023032.01 | MsG0580027319.01 | -0.810899 | 9.163624e-51 | 5.592366e-48 |
MsG0480023240.01 | MsG0580027319.01 | -0.864971 | 8.279464e-65 | 2.649218e-61 |
MsG0480023245.01 | MsG0580027319.01 | -0.807642 | 4.575257e-50 | 2.561814e-47 |
MsG0480023258.01 | MsG0580027319.01 | -0.844958 | 5.474391e-59 | 8.984200e-56 |
MsG0480023412.01 | MsG0580027319.01 | -0.814459 | 1.523982e-51 | 1.023181e-48 |
MsG0480023415.01 | MsG0580027319.01 | -0.845822 | 3.194630e-59 | 5.390840e-56 |
MsG0480023447.01 | MsG0580027319.01 | -0.822563 | 2.215925e-53 | 1.861477e-50 |
MsG0480023500.01 | MsG0580027319.01 | -0.863186 | 2.978382e-64 | 8.950556e-61 |
MsG0480023517.01 | MsG0580027319.01 | -0.817157 | 3.814710e-52 | 2.756786e-49 |
MsG0480023859.01 | MsG0580027319.01 | 0.814627 | 1.399310e-51 | 9.437303e-49 |
MsG0580024157.01 | MsG0580027319.01 | -0.811692 | 6.164290e-51 | 3.841211e-48 |
MsG0580024323.01 | MsG0580027319.01 | -0.834250 | 3.340306e-56 | 3.941856e-53 |
MsG0580024374.01 | MsG0580027319.01 | -0.851691 | 7.523703e-61 | 1.535203e-57 |
MsG0580024536.01 | MsG0580027319.01 | -0.806536 | 7.843170e-50 | 4.267746e-47 |
MsG0580024721.01 | MsG0580027319.01 | -0.801952 | 7.063872e-49 | 3.417538e-46 |
MsG0580024819.01 | MsG0580027319.01 | -0.801254 | 9.820369e-49 | 4.668132e-46 |
MsG0580025400.01 | MsG0580027319.01 | -0.803930 | 2.755594e-49 | 1.402478e-46 |
MsG0580025421.01 | MsG0580027319.01 | -0.842029 | 3.318262e-58 | 4.966625e-55 |
MsG0580025651.01 | MsG0580027319.01 | -0.823316 | 1.479219e-53 | 1.269230e-50 |
MsG0380015607.01 | MsG0580027319.01 | -0.823969 | 1.039968e-53 | 9.090033e-51 |
MsG0380015702.01 | MsG0580027319.01 | -0.814252 | 1.693994e-51 | 1.130914e-48 |
MsG0380015793.01 | MsG0580027319.01 | 0.802898 | 4.509855e-49 | 2.235208e-46 |
MsG0380015831.01 | MsG0580027319.01 | -0.837985 | 3.762617e-57 | 4.970871e-54 |
MsG0380016009.01 | MsG0580027319.01 | 0.817545 | 3.119551e-52 | 2.278538e-49 |
MsG0380016227.01 | MsG0580027319.01 | -0.844484 | 7.349858e-59 | 1.188303e-55 |
MsG0380016971.01 | MsG0580027319.01 | -0.839437 | 1.585606e-57 | 2.189677e-54 |
MsG0380016985.01 | MsG0580027319.01 | -0.821810 | 3.313066e-53 | 2.723896e-50 |
MsG0380017003.01 | MsG0580027319.01 | -0.800044 | 1.733744e-48 | 7.992266e-46 |
MsG0380017195.01 | MsG0580027319.01 | -0.814581 | 1.432025e-51 | 9.646074e-49 |
MsG0380017210.01 | MsG0580027319.01 | -0.805410 | 1.352963e-49 | 7.152768e-47 |
MsG0380017266.01 | MsG0580027319.01 | 0.804460 | 2.136966e-49 | 1.102446e-46 |
MsG0380017330.01 | MsG0580027319.01 | -0.818360 | 2.041688e-52 | 1.525084e-49 |
MsG0380017375.01 | MsG0580027319.01 | -0.802467 | 5.534021e-49 | 2.712832e-46 |
MsG0380017476.01 | MsG0580027319.01 | -0.844558 | 7.019147e-59 | 1.137540e-55 |
MsG0380017604.01 | MsG0580027319.01 | -0.833282 | 5.832883e-56 | 6.685833e-53 |
MsG0380017631.01 | MsG0580027319.01 | -0.826862 | 2.148493e-54 | 2.039452e-51 |
MsG0380017719.01 | MsG0580027319.01 | -0.807600 | 4.670039e-50 | 2.611944e-47 |
MsG0380017836.01 | MsG0580027319.01 | -0.804017 | 2.643009e-49 | 1.348122e-46 |
MsG0380017864.01 | MsG0580027319.01 | -0.825160 | 5.454835e-54 | 4.933063e-51 |
MsG0480018289.01 | MsG0580027319.01 | -0.839457 | 1.566611e-57 | 2.164738e-54 |
MsG0580027319.01 | MsG0580027441.01 | -0.837364 | 5.429512e-57 | 7.036464e-54 |
MsG0580027319.01 | MsG0580028888.01 | -0.803118 | 4.060366e-49 | 2.023661e-46 |
MsG0580027319.01 | MsG0580029231.01 | -0.830228 | 3.305578e-55 | 3.461777e-52 |
MsG0580027319.01 | MsG0580029258.01 | -0.805793 | 1.124448e-49 | 6.003611e-47 |
MsG0580027319.01 | MsG0580029283.01 | -0.850409 | 1.729886e-60 | 3.385548e-57 |
MsG0580027319.01 | MsG0580029629.01 | -0.805303 | 1.424687e-49 | 7.511128e-47 |
MsG0580027319.01 | MsG0580029783.01 | -0.863289 | 2.767783e-64 | 8.348077e-61 |
MsG0580027319.01 | MsG0580030003.01 | -0.842598 | 2.344875e-58 | 3.573133e-55 |
MsG0580027319.01 | MsG0580030235.01 | -0.813656 | 2.292263e-51 | 1.505817e-48 |
MsG0580027319.01 | MsG0680030351.01 | -0.831354 | 1.750945e-55 | 1.895296e-52 |
MsG0580027319.01 | MsG0680030436.01 | -0.801351 | 9.381552e-49 | 4.470489e-46 |
MsG0580027319.01 | MsG0680030684.01 | -0.842646 | 2.277258e-58 | 3.474951e-55 |
MsG0580027319.01 | MsG0680030841.01 | -0.810980 | 8.798152e-51 | 5.381442e-48 |
MsG0580027319.01 | MsG0680031051.01 | -0.827559 | 1.463643e-54 | 1.417888e-51 |
MsG0580027319.01 | MsG0680031651.01 | -0.811880 | 5.611007e-51 | 3.514008e-48 |
MsG0580027319.01 | MsG0680031699.01 | -0.811080 | 8.371102e-51 | 5.133111e-48 |
MsG0580027319.01 | MsG0680034061.01 | -0.823365 | 1.440643e-53 | 1.237754e-50 |
MsG0580027319.01 | MsG0680034757.01 | -0.813074 | 3.076859e-51 | 1.989408e-48 |
MsG0580027319.01 | MsG0680035854.01 | -0.828520 | 8.589917e-55 | 8.558551e-52 |
MsG0580027319.01 | MsG0780036240.01 | -0.813881 | 2.044615e-51 | 1.351379e-48 |
MsG0580027319.01 | MsG0780036247.01 | 0.814134 | 1.797941e-51 | 1.196512e-48 |
MsG0580027319.01 | MsG0780036773.01 | -0.825097 | 5.644977e-54 | 5.095786e-51 |
MsG0580027319.01 | MsG0780037755.01 | -0.848351 | 6.478559e-60 | 1.185524e-56 |
MsG0580027319.01 | MsG0780037975.01 | -0.812301 | 4.542779e-51 | 2.877760e-48 |
MsG0580027319.01 | MsG0780038565.01 | -0.820591 | 6.327490e-53 | 5.027402e-50 |
MsG0580027319.01 | MsG0780038837.01 | -0.803287 | 3.746854e-49 | 1.875516e-46 |
MsG0580027319.01 | MsG0780039950.01 | -0.842752 | 2.134203e-58 | 3.267475e-55 |
MsG0580027319.01 | MsG0780040125.01 | -0.816405 | 5.624312e-52 | 3.981637e-49 |
MsG0580027319.01 | MsG0780040312.01 | -0.806069 | 9.838914e-50 | 5.290267e-47 |
MsG0580027319.01 | MsG0780040445.01 | -0.809641 | 1.711704e-50 | 1.010498e-47 |
MsG0580027319.01 | MsG0780040505.01 | -0.804876 | 1.750050e-49 | 9.126832e-47 |
MsG0580027319.01 | MsG0780040516.01 | -0.806356 | 8.559977e-50 | 4.636289e-47 |
MsG0580027319.01 | MsG0780040519.01 | -0.839011 | 2.044554e-57 | 2.786677e-54 |
MsG0580027319.01 | MsG0780040856.01 | -0.869117 | 3.936133e-66 | 1.459922e-62 |
MsG0580027319.01 | MsG0780040861.01 | -0.819912 | 9.054347e-53 | 7.060533e-50 |
MsG0580027319.01 | MsG0780041161.01 | -0.820828 | 5.579377e-53 | 4.462858e-50 |
MsG0580027319.01 | MsG0780041294.01 | -0.800029 | 1.745330e-48 | 8.042764e-46 |
MsG0580027319.01 | MsG0780041295.01 | -0.807399 | 5.152282e-50 | 2.866878e-47 |
MsG0580027319.01 | MsG0780041310.01 | -0.822995 | 1.757846e-53 | 1.494766e-50 |
MsG0580027319.01 | MsG0780041370.01 | -0.802466 | 5.537329e-49 | 2.714363e-46 |
MsG0580027319.01 | MsG0780041423.01 | -0.851526 | 8.378241e-61 | 1.700622e-57 |
MsG0580027319.01 | MsG0780041469.01 | -0.838927 | 2.150033e-57 | 2.922899e-54 |
MsG0580027319.01 | MsG0780041671.01 | -0.808421 | 3.122300e-50 | 1.784514e-47 |
MsG0580027319.01 | MsG0880042811.01 | -0.812092 | 5.045863e-51 | 3.178329e-48 |
MsG0580027319.01 | MsG0880042829.01 | -0.811297 | 7.512832e-51 | 4.632976e-48 |
MsG0580027319.01 | MsG0880043116.01 | -0.828145 | 1.058083e-54 | 1.042756e-51 |
MsG0580027319.01 | MsG0880043194.01 | -0.814389 | 1.579703e-51 | 1.058621e-48 |
MsG0580027319.01 | MsG0880043522.01 | -0.835140 | 1.995914e-56 | 2.418763e-53 |
MsG0580027319.01 | MsG0880043592.01 | -0.802199 | 6.283824e-49 | 3.059277e-46 |
MsG0580027319.01 | MsG0880045165.01 | -0.817376 | 3.404916e-52 | 2.475537e-49 |
MsG0580027319.01 | MsG0880045415.01 | -0.803764 | 2.983311e-49 | 1.511800e-46 |
MsG0580027319.01 | MsG0880045631.01 | -0.850353 | 1.794244e-60 | 3.504701e-57 |
MsG0580027319.01 | MsG0880045897.01 | 0.828248 | 9.991496e-55 | 9.875997e-52 |
MsG0580027319.01 | MsG0880045914.01 | -0.831422 | 1.684758e-55 | 1.827295e-52 |
MsG0580027319.01 | MsG0880046113.01 | -0.814186 | 1.751360e-51 | 1.167139e-48 |
MsG0580027319.01 | MsG0880046177.01 | -0.823694 | 1.206877e-53 | 1.046875e-50 |
MsG0580027319.01 | MsG0880046321.01 | -0.806677 | 7.323312e-50 | 3.999101e-47 |
MsG0580027319.01 | MsG0880046328.01 | -0.824691 | 7.038585e-54 | 6.280894e-51 |
MsG0580027319.01 | MsG0880046762.01 | -0.816205 | 6.235313e-52 | 4.390311e-49 |
MsG0580027319.01 | MsG0880046933.01 | -0.851868 | 6.705603e-61 | 1.375778e-57 |
MsG0580027319.01 | MsG0880047016.01 | -0.853541 | 2.232019e-61 | 4.839396e-58 |
MsG0580027319.01 | MsG0880047019.01 | -0.810773 | 9.757158e-51 | 5.934418e-48 |
MsG0580027319.01 | MsG0880047038.01 | -0.825411 | 4.756495e-54 | 4.332024e-51 |
MsG0580027319.01 | MsG0880047192.01 | -0.802149 | 6.435157e-49 | 3.129115e-46 |
MsG0580027319.01 | MsG0880047328.01 | 0.806518 | 7.910644e-50 | 4.302512e-47 |
MsG0580027319.01 | MsG0880047428.01 | -0.841357 | 4.989964e-58 | 7.313444e-55 |
MsG0580027319.01 | MsG0880047607.01 | -0.817718 | 2.852239e-52 | 2.093137e-49 |
MsG0280006519.01 | MsG0580027319.01 | -0.801388 | 9.219650e-49 | 4.397390e-46 |
MsG0280006906.01 | MsG0580027319.01 | -0.820734 | 5.865483e-53 | 4.679152e-50 |
MsG0280007048.01 | MsG0580027319.01 | -0.816743 | 4.725547e-52 | 3.376446e-49 |
MsG0280007222.01 | MsG0580027319.01 | -0.800349 | 1.502895e-48 | 6.982217e-46 |
MsG0280007609.01 | MsG0580027319.01 | -0.816923 | 4.305665e-52 | 3.091725e-49 |
MsG0280007710.01 | MsG0580027319.01 | -0.832830 | 7.557386e-56 | 8.545943e-53 |
MsG0280007764.01 | MsG0580027319.01 | -0.823100 | 1.660775e-53 | 1.416479e-50 |
MsG0280007790.01 | MsG0580027319.01 | -0.815369 | 9.578815e-52 | 6.591621e-49 |
MsG0280008037.01 | MsG0580027319.01 | -0.805244 | 1.465945e-49 | 7.716882e-47 |
MsG0280008134.01 | MsG0580027319.01 | -0.800542 | 1.372361e-48 | 6.406932e-46 |
MsG0280008239.01 | MsG0580027319.01 | -0.869114 | 3.946454e-66 | 1.463607e-62 |
MsG0280008286.01 | MsG0580027319.01 | -0.816763 | 4.676627e-52 | 3.343375e-49 |
MsG0280008502.01 | MsG0580027319.01 | -0.821226 | 4.517932e-53 | 3.654149e-50 |
MsG0280008907.01 | MsG0580027319.01 | -0.832944 | 7.077660e-56 | 8.031200e-53 |
MsG0280009111.01 | MsG0580027319.01 | -0.805659 | 1.199573e-49 | 6.382579e-47 |
MsG0280009141.01 | MsG0580027319.01 | -0.819199 | 1.316601e-52 | 1.006422e-49 |
MsG0280009142.01 | MsG0580027319.01 | -0.810498 | 1.118926e-50 | 6.755340e-48 |
MsG0280009230.01 | MsG0580027319.01 | -0.823700 | 1.203025e-53 | 1.043703e-50 |
MsG0280009441.01 | MsG0580027319.01 | -0.800618 | 1.324755e-48 | 6.196578e-46 |
MsG0280009716.01 | MsG0580027319.01 | -0.819782 | 9.695343e-53 | 7.533082e-50 |
MsG0280010276.01 | MsG0580027319.01 | 0.812068 | 5.106845e-51 | 3.214587e-48 |
MsG0280010423.01 | MsG0580027319.01 | 0.834541 | 2.823301e-56 | 3.361131e-53 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027319.01.T01 | MTR_5g054770 | 97.701 | 87 | 2 | 0 | 3 | 89 | 70 | 156 | 2.14e-60 | 181 |
MsG0580027319.01.T01 | MTR_6g085050 | 83.908 | 87 | 14 | 0 | 3 | 89 | 74 | 160 | 2.52e-52 | 160 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027319.01.T01 | AT1G68660 | 86.207 | 87 | 12 | 0 | 3 | 89 | 73 | 159 | 1.45e-53 | 164 |
MsG0580027319.01.T01 | AT1G68660 | 57.471 | 87 | 7 | 1 | 3 | 89 | 73 | 129 | 3.48e-27 | 96.3 |
Find 23 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCATTGTATGCAACTTAG+AGG | 0.399829 | 5:+58384655 | MsG0580027319.01.T01:CDS |
TTGTGCAATATTACACGATA+TGG | 0.414798 | 5:-58384484 | None:intergenic |
GCATTATCAAGGGTCATTCC+AGG | 0.425052 | 5:-58384559 | None:intergenic |
TGATGTTAACTGCATTATCA+AGG | 0.464225 | 5:-58384570 | None:intergenic |
CTGGCATTTCTAAGATGTGC+AGG | 0.481246 | 5:+58384440 | None:intergenic |
TGTATGCAACTTAGAGGCAA+TGG | 0.502603 | 5:+58384661 | MsG0580027319.01.T01:CDS |
CTCAGTTCAATTGAACCTGC+AGG | 0.507343 | 5:+58384688 | MsG0580027319.01.T01:CDS |
AATGATCTTCAGCATCAGCT+TGG | 0.508043 | 5:-58384639 | None:intergenic |
ATGATCTTCAGCATCAGCTT+GGG | 0.510156 | 5:-58384638 | None:intergenic |
GGATCACCTTCATAAGTACT+TGG | 0.538715 | 5:-58384537 | None:intergenic |
CTAAGATGTGCAGGAAATCA+CGG | 0.554342 | 5:+58384449 | None:intergenic |
CATCAGCAACCATCACCTGC+AGG | 0.555211 | 5:-58384703 | None:intergenic |
TGTTGTCCAAGTACTTATGA+AGG | 0.564357 | 5:+58384531 | MsG0580027319.01.T01:CDS |
GTACTTATGAAGGTGATCCC+TGG | 0.569299 | 5:+58384541 | MsG0580027319.01.T01:CDS |
TCAATTGAACCTGCAGGTGA+TGG | 0.594938 | 5:+58384694 | MsG0580027319.01.T01:CDS |
CATTATCAAGGGTCATTCCA+GGG | 0.602128 | 5:-58384558 | None:intergenic |
GATGTTAACTGCATTATCAA+GGG | 0.610327 | 5:-58384569 | None:intergenic |
CAATGACAACTTCAACAGAC+GGG | 0.612734 | 5:+58384504 | MsG0580027319.01.T01:CDS |
TGCAATATTACACGATATGG+CGG | 0.626220 | 5:-58384481 | None:intergenic |
ACAATGACAACTTCAACAGA+CGG | 0.629056 | 5:+58384503 | MsG0580027319.01.T01:CDS |
ATGCAAGAAGCTCACCACAA+TGG | 0.636426 | 5:+58384592 | MsG0580027319.01.T01:CDS |
TCACCACAATGGAATGTCAG+TGG | 0.665125 | 5:+58384603 | MsG0580027319.01.T01:CDS |
TCACCACTGACATTCCATTG+TGG | 0.707546 | 5:-58384606 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GATGTTAACTGCATTATCAA+GGG | - | Chr5:58384572-58384591 | None:intergenic | 30.0% | |
TGATGTTAACTGCATTATCA+AGG | - | Chr5:58384573-58384592 | None:intergenic | 30.0% | |
TTGTGCAATATTACACGATA+TGG | - | Chr5:58384487-58384506 | None:intergenic | 30.0% | |
ACAATGACAACTTCAACAGA+CGG | + | Chr5:58384503-58384522 | MsG0580027319.01.T01:CDS | 35.0% | |
GATCATTGTATGCAACTTAG+AGG | + | Chr5:58384655-58384674 | MsG0580027319.01.T01:CDS | 35.0% | |
TGCAATATTACACGATATGG+CGG | - | Chr5:58384484-58384503 | None:intergenic | 35.0% | |
TGTTGTCCAAGTACTTATGA+AGG | + | Chr5:58384531-58384550 | MsG0580027319.01.T01:CDS | 35.0% | |
AATGATCTTCAGCATCAGCT+TGG | - | Chr5:58384642-58384661 | None:intergenic | 40.0% | |
ATGATCTTCAGCATCAGCTT+GGG | - | Chr5:58384641-58384660 | None:intergenic | 40.0% | |
CAATGACAACTTCAACAGAC+GGG | + | Chr5:58384504-58384523 | MsG0580027319.01.T01:CDS | 40.0% | |
CATTATCAAGGGTCATTCCA+GGG | - | Chr5:58384561-58384580 | None:intergenic | 40.0% | |
GGATCACCTTCATAAGTACT+TGG | - | Chr5:58384540-58384559 | None:intergenic | 40.0% | |
TGTATGCAACTTAGAGGCAA+TGG | + | Chr5:58384661-58384680 | MsG0580027319.01.T01:CDS | 40.0% | |
ATGCAAGAAGCTCACCACAA+TGG | + | Chr5:58384592-58384611 | MsG0580027319.01.T01:CDS | 45.0% | |
CTCAGTTCAATTGAACCTGC+AGG | + | Chr5:58384688-58384707 | MsG0580027319.01.T01:CDS | 45.0% | |
GCATTATCAAGGGTCATTCC+AGG | - | Chr5:58384562-58384581 | None:intergenic | 45.0% | |
GTACTTATGAAGGTGATCCC+TGG | + | Chr5:58384541-58384560 | MsG0580027319.01.T01:CDS | 45.0% | |
TCAATTGAACCTGCAGGTGA+TGG | + | Chr5:58384694-58384713 | MsG0580027319.01.T01:CDS | 45.0% | |
TCACCACAATGGAATGTCAG+TGG | + | Chr5:58384603-58384622 | MsG0580027319.01.T01:CDS | 45.0% | |
TCACCACTGACATTCCATTG+TGG | - | Chr5:58384609-58384628 | None:intergenic | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 58384454 | 58384723 | 58384454 | ID=MsG0580027319.01;Name=MsG0580027319.01 |
Chr5 | mRNA | 58384454 | 58384723 | 58384454 | ID=MsG0580027319.01.T01;Parent=MsG0580027319.01;Name=MsG0580027319.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|89 |
Chr5 | exon | 58384454 | 58384723 | 58384454 | ID=MsG0580027319.01.T01:exon:21867;Parent=MsG0580027319.01.T01 |
Chr5 | CDS | 58384454 | 58384723 | 58384454 | ID=MsG0580027319.01.T01:cds;Parent=MsG0580027319.01.T01 |
Gene Sequence |
Protein sequence |