AlfalfaGEDB | MsG0380011786.01

M. sativa cultivar ZhongmuNo.1 / MsG0380011786.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380011786.01.T02	XP_003599211.1	71.053	76	22	0	1	76	288	363	6.80E-28	115
MsG0380011786.01.T01	XP_003599218.1	62.733	161	53	3	1	154	207	367	3.28E-57	194

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380011786.01.T01	G7IWQ6	62.733	161	53	3	1	154	207	367	1.57e-57	194
MsG0380011786.01.T02	G7IWP9	71.053	76	22	0	1	76	288	363	3.25e-28	115

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048874.01	MsG0380011786.01	0.820548	6.473279e-53	5.137485e-50
MsG0180000470.01	MsG0380011786.01	0.818687	1.721245e-52	1.297253e-49
MsG0180000748.01	MsG0380011786.01	0.808166	3.538666e-50	2.009015e-47
MsG0180002195.01	MsG0380011786.01	0.800522	1.385286e-48	6.464010e-46
MsG0180002234.01	MsG0380011786.01	0.800306	1.533509e-48	7.116788e-46
MsG0180002282.01	MsG0380011786.01	0.816752	4.702417e-52	3.360856e-49
MsG0180004264.01	MsG0380011786.01	0.810903	9.145292e-51	5.581850e-48
MsG0180004275.01	MsG0380011786.01	0.843852	1.085989e-58	1.721506e-55
MsG0180005185.01	MsG0380011786.01	0.807604	4.660775e-50	2.607074e-47
MsG0180005705.01	MsG0380011786.01	0.838607	2.600717e-57	3.501600e-54
MsG0280006325.01	MsG0380011786.01	0.836659	8.220210e-57	1.042717e-53
MsG0380011759.01	MsG0380011786.01	0.819605	1.063894e-52	8.224906e-50
MsG0380011772.01	MsG0380011786.01	0.801201	1.006954e-48	4.780164e-46
MsG0380011786.01	MsG0380011910.01	0.882161	1.313549e-70	7.914795e-67
MsG0380011786.01	MsG0380012330.01	0.805231	1.475127e-49	7.762717e-47
MsG0380011786.01	MsG0380013896.01	0.826372	2.812031e-54	2.632385e-51
MsG0380011786.01	MsG0380014977.01	0.804915	1.717857e-49	8.967782e-47
MsG0380011786.01	MsG0380017822.01	0.837795	4.209659e-57	5.529147e-54
MsG0380011786.01	MsG0480022259.01	0.812977	3.231531e-51	2.083986e-48
MsG0380011786.01	MsG0480022262.01	0.815548	8.737870e-52	6.042526e-49
MsG0380011786.01	MsG0580024621.01	0.814569	1.441458e-51	9.706322e-49
MsG0380011786.01	MsG0580026222.01	0.803365	3.609108e-49	1.810192e-46
MsG0380011786.01	MsG0580026434.01	0.807610	4.647391e-50	2.600017e-47
MsG0380011786.01	MsG0580026613.01	0.801953	7.059327e-49	3.415463e-46
MsG0380011786.01	MsG0580027018.01	0.809298	2.027709e-50	1.186107e-47
MsG0380011786.01	MsG0580027687.01	0.804559	2.038262e-49	1.054204e-46
MsG0380011786.01	MsG0580027688.01	0.826750	2.285439e-54	2.162458e-51
MsG0380011786.01	MsG0680030561.01	0.802864	4.581342e-49	2.268697e-46
MsG0380011786.01	MsG0680033466.01	0.812097	5.033152e-51	3.170780e-48
MsG0380011786.01	MsG0680035115.01	0.807307	5.387243e-50	2.990563e-47
MsG0380011786.01	MsG0780036080.01	0.832160	1.107657e-55	1.227822e-52
MsG0380011786.01	MsG0780036201.01	0.801883	7.296758e-49	3.524325e-46
MsG0380011786.01	MsG0780039282.01	0.807528	4.836379e-50	2.700124e-47
MsG0380011786.01	MsG0780040704.01	0.810912	9.102527e-51	5.557091e-48
MsG0380011786.01	MsG0780040788.01	0.811491	6.816868e-51	4.225741e-48
MsG0380011786.01	MsG0880041836.01	0.800488	1.407839e-48	6.563549e-46
MsG0380011786.01	MsG0880042161.01	0.805114	1.560841e-49	8.189121e-47
MsG0380011786.01	MsG0880043812.01	0.812465	4.182639e-51	2.661476e-48
MsG0280009248.01	MsG0380011786.01	0.822899	1.850473e-53	1.569304e-50
MsG0280009646.01	MsG0380011786.01	0.810591	1.067955e-50	6.463854e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380011786.01.T02	MTR_3g030250	71.053	76	22	0	1	76	288	363	8.24e-32	115
MsG0380011786.01.T02	MTR_3g010520	69.737	76	23	0	1	76	268	343	3.83e-30	110
MsG0380011786.01.T02	MTR_3g010920	68.831	77	22	1	2	76	289	365	3.42e-29	108
MsG0380011786.01.T02	MTR_3g010870	59.091	88	36	0	1	88	225	312	3.60e-29	107
MsG0380011786.01.T02	MTR_3g010870	59.091	88	36	0	1	88	293	380	1.00e-28	107
MsG0380011786.01.T02	MTR_3g023930	67.105	76	25	0	1	76	276	351	1.27e-28	107
MsG0380011786.01.T02	MTR_3g030240	67.105	76	25	0	1	76	286	361	1.35e-28	107
MsG0380011786.01.T02	MTR_3g006550	57.303	89	37	1	1	88	45	133	1.74e-28	101
MsG0380011786.01.T02	MTR_3g006500	63.158	76	28	0	1	76	278	353	2.94e-27	103
MsG0380011786.01.T02	MTR_3g030330	57.447	94	34	2	1	88	274	367	3.01e-27	103
MsG0380011786.01.T02	MTR_3g010970	66.234	77	24	2	2	76	299	375	2.49e-26	101
MsG0380011786.01.T02	MTR_3g023940	59.211	76	25	1	1	76	298	367	1.81e-24	96.3
MsG0380011786.01.T02	MTR_3g010880	63.158	76	27	1	1	76	250	324	1.96e-24	95.5
MsG0380011786.01.T02	MTR_3g010590	63.750	80	23	1	3	76	290	369	4.13e-24	95.1
MsG0380011786.01.T02	MTR_2g078850	58.442	77	31	1	1	76	291	367	2.27e-23	92.8
MsG0380011786.01.T02	MTR_3g024150	56.000	75	33	0	1	75	294	368	2.82e-22	90.1
MsG0380011786.01.T02	MTR_2g078870	47.778	90	45	1	1	88	214	303	6.00e-22	88.6
MsG0380011786.01.T02	MTR_6g065980	52.174	92	39	2	1	91	264	351	8.26e-22	88.6
MsG0380011786.01.T02	MTR_0044s0300	50.649	77	37	1	1	76	297	373	3.83e-20	84.3
MsG0380011786.01.T02	MTR_3g010620	51.613	93	27	2	2	76	284	376	4.30e-20	84.3
MsG0380011786.01.T02	MTR_8g013810	52.500	80	32	1	42	121	418	491	8.36e-20	84.0
MsG0380011786.01.T02	MTR_3g010430	44.944	89	48	1	1	88	300	388	1.44e-19	82.8
MsG0380011786.01.T02	MTR_3g083660	51.948	77	36	1	1	76	188	264	4.79e-19	80.1
MsG0380011786.01.T02	MTR_3g024110	53.247	77	35	1	1	76	355	431	5.26e-19	81.3
MsG0380011786.01.T02	MTR_1g089745	85.366	41	6	0	81	121	51	91	9.16e-19	75.9
MsG0380011786.01.T02	MTR_1g115160	42.529	87	50	0	2	88	276	362	1.26e-18	80.1
MsG0380011786.01.T02	MTR_7g498320	52.000	75	35	1	1	74	151	225	2.03e-18	77.8
MsG0380011786.01.T02	MTR_3g006570	44.444	90	48	2	1	88	283	372	4.45e-18	78.6
MsG0380011786.01.T02	MTR_3g036430	43.820	89	48	2	1	88	251	338	4.58e-17	75.5
MsG0380011786.01.T02	MTR_3g030320	50.633	79	34	2	1	76	205	281	1.10e-16	73.9
MsG0380011786.01.T02	MTR_2g078900	60.000	55	21	1	1	54	291	345	3.13e-16	73.2
MsG0380011786.01.T02	MTR_2g021155	40.000	115	57	4	2	113	300	405	1.82e-15	71.6
MsG0380011786.01.T02	MTR_2g021155	46.154	78	30	3	4	75	867	938	8.90e-14	66.6
MsG0380011786.01.T02	MTR_3g083640	43.478	92	43	3	1	88	312	398	2.77e-15	70.9
MsG0380011786.01.T02	MTR_2g021190	40.698	86	44	2	2	86	287	366	4.70e-15	70.1
MsG0380011786.01.T02	MTR_1g114700	40.000	90	49	2	2	88	296	383	5.29e-15	70.1
MsG0380011786.01.T02	MTR_3g006640	43.038	79	42	1	1	76	198	276	9.38e-15	68.9
MsG0380011786.01.T02	MTR_1g113900	46.053	76	38	2	2	76	156	229	1.01e-14	68.2
MsG0380011786.01.T02	MTR_5g046300	45.349	86	45	2	3	88	263	346	1.24e-14	68.9
MsG0380011786.01.T02	MTR_5g046290	45.349	86	45	2	3	88	263	346	1.24e-14	68.9
MsG0380011786.01.T02	MTR_2g021252	38.372	86	46	2	2	86	299	378	1.71e-14	68.6
MsG0380011786.01.T02	MTR_2g029990	44.444	81	38	3	2	81	317	391	3.05e-14	67.8
MsG0380011786.01.T02	MTR_3g030350	46.835	79	39	2	1	76	294	372	3.38e-14	67.8
MsG0380011786.01.T02	MTR_3g096250	43.182	88	35	1	1	88	269	341	3.95e-14	67.4
MsG0380011786.01.T02	MTR_2g021210	43.210	81	39	2	2	81	339	413	5.57e-14	67.0
MsG0380011786.01.T02	MTR_5g046280	44.186	86	46	2	3	88	166	249	6.61e-14	66.2
MsG0380011786.01.T02	MTR_1004s0010	40.659	91	52	1	1	91	270	358	3.63e-13	64.7
MsG0380011786.01.T02	MTR_0760s0010	40.909	88	50	1	1	88	300	385	4.27e-13	64.7
MsG0380011786.01.T02	MTR_3g006530	38.636	88	51	2	2	88	307	392	4.31e-13	64.7
MsG0380011786.01.T02	MTR_3g013770	43.421	76	37	4	3	75	303	375	7.30e-13	63.9
MsG0380011786.01.T02	MTR_1g114650	46.667	75	37	2	2	76	137	208	1.11e-12	62.4
MsG0380011786.01.T02	MTR_8g062660	41.096	73	40	2	4	76	296	365	1.11e-12	63.5
MsG0380011786.01.T02	MTR_3g014540	40.000	75	37	3	4	75	296	365	2.83e-12	62.4
MsG0380011786.01.T02	MTR_3g036335	44.304	79	36	3	1	75	304	378	3.26e-12	62.0
MsG0380011786.01.T02	MTR_1g112930	47.222	72	35	2	1	71	282	351	4.19e-12	61.6
MsG0380011786.01.T02	MTR_3g096280	35.714	84	53	1	6	88	255	338	4.63e-12	61.6
MsG0380011786.01.T02	MTR_5g026830	39.474	76	40	3	4	76	197	269	6.62e-12	60.8
MsG0380011786.01.T02	MTR_3g030310	35.000	100	50	3	2	88	289	386	7.01e-12	61.2
MsG0380011786.01.T02	MTR_6g014720	44.000	75	39	2	2	75	279	351	7.84e-12	60.8
MsG0380011786.01.T02	MTR_3g036290	40.541	74	38	2	4	75	274	343	1.30e-11	60.5
MsG0380011786.01.T02	MTR_6g013270	44.000	75	39	2	2	75	297	369	1.32e-11	60.5
MsG0380011786.01.T02	MTR_6g021880	44.304	79	37	3	2	79	295	367	2.06e-11	59.7
MsG0380011786.01.T02	MTR_1g115180	44.737	76	39	2	2	76	114	187	3.53e-11	58.2
MsG0380011786.01.T02	MTR_3g006670	42.169	83	37	3	4	76	317	398	4.25e-11	58.9
MsG0380011786.01.T02	MTR_6g007135	41.463	82	35	3	2	76	299	374	4.53e-11	58.9
MsG0380011786.01.T02	MTR_6g053260	34.118	85	50	2	2	80	603	687	8.16e-11	58.2
MsG0380011786.01.T01	MTR_3g030330	62.733	161	53	3	1	154	207	367	3.98e-61	194
MsG0380011786.01.T01	MTR_3g010870	64.052	153	54	1	3	154	160	312	4.27e-61	192
MsG0380011786.01.T01	MTR_3g010870	64.052	153	54	1	3	154	228	380	2.30e-60	192
MsG0380011786.01.T01	MTR_3g010920	61.111	144	48	2	1	142	228	365	5.64e-54	176
MsG0380011786.01.T01	MTR_3g010970	61.538	143	47	3	2	142	239	375	9.11e-53	173
MsG0380011786.01.T01	MTR_3g023940	55.629	151	52	2	1	142	223	367	1.47e-51	170
MsG0380011786.01.T01	MTR_3g030250	60.839	143	51	3	1	142	225	363	4.26e-51	169
MsG0380011786.01.T01	MTR_3g030240	60.563	142	50	2	1	142	226	361	4.34e-51	168
MsG0380011786.01.T01	MTR_3g010590	61.486	148	47	2	1	142	226	369	6.60e-51	168
MsG0380011786.01.T01	MTR_3g010880	57.051	156	51	4	1	142	171	324	1.06e-50	166
MsG0380011786.01.T01	MTR_3g010520	61.871	139	46	3	5	142	211	343	1.99e-48	161
MsG0380011786.01.T01	MTR_3g023930	59.574	141	51	2	2	142	217	351	3.50e-48	160
MsG0380011786.01.T01	MTR_3g024150	56.738	141	56	2	5	141	229	368	5.06e-47	158
MsG0380011786.01.T01	MTR_0044s0300	55.479	146	59	3	1	142	230	373	1.02e-44	152
MsG0380011786.01.T01	MTR_2g078850	55.634	142	61	2	2	142	227	367	9.02e-44	149
MsG0380011786.01.T01	MTR_3g006500	56.835	139	55	3	6	142	218	353	2.03e-43	148
MsG0380011786.01.T01	MTR_6g065980	52.597	154	66	4	5	157	204	351	2.38e-43	148
MsG0380011786.01.T01	MTR_3g010620	51.875	160	53	3	1	142	223	376	7.04e-42	145
MsG0380011786.01.T01	MTR_2g078870	50.000	152	74	1	5	154	152	303	8.82e-42	142
MsG0380011786.01.T01	MTR_2g078900	57.377	122	49	2	2	120	224	345	1.59e-38	135
MsG0380011786.01.T01	MTR_3g083660	49.296	142	68	3	2	142	126	264	3.09e-36	127
MsG0380011786.01.T01	MTR_3g036430	45.033	151	77	4	5	154	193	338	5.66e-36	128
MsG0380011786.01.T01	MTR_3g006640	46.259	147	72	4	3	142	130	276	4.14e-35	125
MsG0380011786.01.T01	MTR_7g498320	49.645	141	65	3	1	140	90	225	4.87e-35	123
MsG0380011786.01.T01	MTR_1g113900	48.252	143	70	3	2	142	89	229	2.36e-34	122
MsG0380011786.01.T01	MTR_5g046300	46.452	155	78	4	2	154	195	346	5.42e-34	123
MsG0380011786.01.T01	MTR_5g046290	46.452	155	78	4	2	154	195	346	5.42e-34	123
MsG0380011786.01.T01	MTR_5g046280	45.806	155	79	4	2	154	98	249	9.55e-34	120
MsG0380011786.01.T01	MTR_3g030320	50.000	144	62	5	5	142	142	281	1.67e-33	121
MsG0380011786.01.T01	MTR_1004s0010	46.104	154	78	3	2	154	206	355	1.76e-33	122
MsG0380011786.01.T01	MTR_0760s0010	46.104	154	78	3	2	154	236	385	2.72e-33	122
MsG0380011786.01.T01	MTR_3g006570	44.156	154	80	4	5	154	221	372	5.01e-33	121
MsG0380011786.01.T01	MTR_2g021190	43.421	152	78	3	3	152	221	366	5.98e-33	121
MsG0380011786.01.T01	MTR_3g024110	49.315	146	66	5	1	142	290	431	8.15e-33	122
MsG0380011786.01.T01	MTR_3g010430	43.791	153	71	3	3	154	250	388	1.53e-31	118
MsG0380011786.01.T01	MTR_3g036335	46.897	145	66	5	2	141	240	378	3.04e-31	117
MsG0380011786.01.T01	MTR_3g083640	43.590	156	77	4	3	154	250	398	4.20e-31	117
MsG0380011786.01.T01	MTR_1g115160	43.046	151	84	1	6	154	212	362	3.17e-30	114
MsG0380011786.01.T01	MTR_1g114650	46.043	139	71	3	5	142	73	208	4.72e-29	107
MsG0380011786.01.T01	MTR_2g021155	40.217	184	95	6	2	179	231	405	1.48e-28	111
MsG0380011786.01.T01	MTR_2g021155	41.892	148	72	5	2	141	797	938	4.85e-25	101
MsG0380011786.01.T01	MTR_3g030310	38.012	171	85	5	1	154	220	386	2.43e-28	109
MsG0380011786.01.T01	MTR_3g030350	47.260	146	71	4	3	142	227	372	2.97e-28	108
MsG0380011786.01.T01	MTR_6g014720	42.759	145	77	4	2	142	210	352	6.32e-28	107
MsG0380011786.01.T01	MTR_3g006550	56.667	90	38	1	66	154	44	133	9.61e-28	102
MsG0380011786.01.T01	MTR_2g029990	43.333	150	74	5	3	147	248	391	1.56e-27	107
MsG0380011786.01.T01	MTR_6g013270	43.151	146	75	5	2	142	228	370	2.15e-27	106
MsG0380011786.01.T01	MTR_3g006530	40.397	151	84	4	5	154	247	392	4.15e-27	105
MsG0380011786.01.T01	MTR_2g021252	39.869	153	71	4	2	152	245	378	8.21e-27	105
MsG0380011786.01.T01	MTR_6g053240	40.000	150	78	5	6	146	237	383	2.61e-26	103
MsG0380011786.01.T01	MTR_3g096250	44.604	139	57	3	20	154	219	341	1.30e-25	101
MsG0380011786.01.T01	MTR_8g062660	40.580	138	71	4	5	142	239	365	1.74e-25	102
MsG0380011786.01.T01	MTR_1g114700	39.610	154	87	3	5	154	232	383	3.95e-25	100
MsG0380011786.01.T01	MTR_6g053260	38.710	155	83	5	1	146	536	687	8.74e-25	100
MsG0380011786.01.T01	MTR_6g021880	42.361	144	73	5	6	145	230	367	1.32e-24	99.0
MsG0380011786.01.T01	MTR_1g115180	46.667	120	60	3	25	142	70	187	1.97e-24	95.5
MsG0380011786.01.T01	MTR_3g006670	40.909	154	73	7	2	142	250	398	2.63e-24	98.6
MsG0380011786.01.T01	MTR_2g435950	40.000	140	73	4	3	139	150	281	5.94e-24	96.3
MsG0380011786.01.T01	MTR_3g007410	40.714	140	71	6	7	141	258	390	1.23e-23	96.7
MsG0380011786.01.T01	MTR_3g013770	38.732	142	74	6	6	141	241	375	4.09e-23	95.1
MsG0380011786.01.T01	MTR_3g007360	40.000	140	72	6	7	141	258	390	8.31e-23	94.4
MsG0380011786.01.T01	MTR_3g007330	49.074	108	46	4	6	108	246	349	8.75e-23	94.4
MsG0380011786.01.T01	MTR_7g007300	40.385	156	83	6	5	154	290	441	1.08e-22	94.4
MsG0380011786.01.T01	MTR_6g007135	39.726	146	72	5	6	141	234	373	1.49e-22	93.6
MsG0380011786.01.T01	MTR_1g112930	42.537	134	70	3	5	137	224	351	2.11e-22	92.8
MsG0380011786.01.T01	MTR_5g011200	37.037	162	89	5	5	158	218	374	2.16e-22	92.8
MsG0380011786.01.T01	MTR_1g115185	40.132	152	87	3	5	154	241	390	2.27e-22	93.2
MsG0380011786.01.T01	MTR_3g096280	36.601	153	70	3	5	154	210	338	4.41e-22	91.7
MsG0380011786.01.T01	MTR_3g036290	40.714	140	71	5	6	141	212	343	5.21e-22	91.7
MsG0380011786.01.T01	MTR_3g014540	36.620	142	76	6	6	141	232	365	6.57e-22	91.7
MsG0380011786.01.T01	MTR_3g024130	40.714	140	72	5	6	140	168	301	7.57e-22	90.9
MsG0380011786.01.T01	MTR_2g021210	43.624	149	74	5	3	147	271	413	7.65e-22	92.0
MsG0380011786.01.T01	MTR_3g011100	42.208	154	70	8	6	148	443	588	1.26e-21	91.7
MsG0380011786.01.T01	MTR_3g009240	40.152	132	72	3	6	134	236	363	1.40e-21	90.9
MsG0380011786.01.T01	MTR_6g027890	38.571	140	76	4	6	141	177	310	3.88e-21	89.0
MsG0380011786.01.T01	MTR_1g058190	42.424	132	71	4	1	131	217	344	6.08e-21	89.0
MsG0380011786.01.T01	MTR_6g007150	37.162	148	76	5	6	142	179	320	6.45e-21	88.6
MsG0380011786.01.T01	MTR_3g007270	44.737	114	54	5	6	114	261	370	7.26e-21	89.0
MsG0380011786.01.T01	MTR_6g004210	35.329	167	83	6	6	154	242	401	1.63e-20	88.2
MsG0380011786.01.T01	MTR_6g048140	39.583	144	77	5	6	142	244	384	2.56e-20	87.4
MsG0380011786.01.T01	MTR_3g010440	41.958	143	62	6	6	135	170	304	2.73e-20	86.7
MsG0380011786.01.T01	MTR_4g031770	33.951	162	95	2	5	154	203	364	5.27e-20	86.3
MsG0380011786.01.T01	MTR_1g054725	34.694	147	86	5	1	142	219	360	5.73e-20	86.3
MsG0380011786.01.T01	MTR_1g056280	36.842	152	80	4	5	142	59	208	7.54e-20	83.2
MsG0380011786.01.T01	MTR_5g009060	38.732	142	73	5	6	141	253	386	9.26e-20	85.9
MsG0380011786.01.T01	MTR_7g013590	37.324	142	77	6	6	141	238	373	9.90e-20	85.9
MsG0380011786.01.T01	MTR_3g436150	42.017	119	64	3	2	115	240	358	1.11e-19	85.5
MsG0380011786.01.T01	MTR_1g055375	38.194	144	84	3	3	142	208	350	1.23e-19	85.1
MsG0380011786.01.T01	MTR_3g024040	40.000	135	75	5	6	137	222	353	1.61e-19	85.1
MsG0380011786.01.T01	MTR_6g027910	36.957	138	77	4	6	141	229	358	2.27e-19	84.7
MsG0380011786.01.T01	MTR_5g026830	41.228	114	56	5	34	142	162	269	2.28e-19	83.6
MsG0380011786.01.T01	MTR_5g057790	38.571	140	75	5	6	141	247	379	2.40e-19	84.7
MsG0380011786.01.T01	MTR_3g007390	38.636	132	61	5	7	126	65	188	2.57e-19	82.0
MsG0380011786.01.T01	MTR_1g055065	37.580	157	89	7	3	154	131	283	3.27e-19	83.2
MsG0380011786.01.T01	MTR_8g013810	52.500	80	32	1	108	187	418	491	5.22e-19	84.0
MsG0380011786.01.T01	MTR_4g055060	39.437	142	75	5	5	141	238	373	6.66e-19	83.2
MsG0380011786.01.T01	MTR_1g055045	35.065	154	91	6	5	154	9	157	8.46e-19	79.3
MsG0380011786.01.T01	MTR_3g010390	39.355	155	70	8	3	142	241	386	8.79e-19	83.2
MsG0380011786.01.T01	MTR_5g056990	37.762	143	79	4	3	141	89	225	9.42e-19	81.3
MsG0380011786.01.T01	MTR_6g048120	37.162	148	80	6	1	142	242	382	9.87e-19	83.2
MsG0380011786.01.T01	MTR_1g100763	42.748	131	68	5	5	131	169	296	1.13e-18	81.6
MsG0380011786.01.T01	MTR_5g046260	35.948	153	59	4	2	154	180	293	1.16e-18	81.6
MsG0380011786.01.T01	MTR_1g057890	38.849	139	66	6	25	154	224	352	2.03e-18	81.6
MsG0380011786.01.T01	MTR_5g057710	37.857	140	77	4	6	141	247	380	3.80e-18	81.3
MsG0380011786.01.T01	MTR_4g061340	35.766	137	75	5	7	142	238	362	4.19e-18	80.9
MsG0380011786.01.T01	MTR_8g054320	35.664	143	78	6	6	142	155	289	4.43e-18	80.1
MsG0380011786.01.T01	MTR_1g089745	85.366	41	6	0	147	187	51	91	5.40e-18	75.9
MsG0380011786.01.T01	MTR_3g011020	35.616	146	83	5	3	142	219	359	5.87e-18	80.5
MsG0380011786.01.T01	MTR_7g407070	36.054	147	83	5	3	142	245	387	7.70e-18	80.5
MsG0380011786.01.T01	MTR_3g007430	42.478	113	49	5	7	114	248	349	7.72e-18	80.5
MsG0380011786.01.T01	MTR_6g004660	36.641	131	72	4	6	131	228	352	1.30e-17	79.7
MsG0380011786.01.T01	MTR_2g021150	32.075	159	93	6	3	154	214	364	1.84e-17	79.3
MsG0380011786.01.T01	MTR_4g132560	36.620	142	79	6	6	142	106	241	2.04e-17	77.8
MsG0380011786.01.T01	MTR_3g009300	34.247	146	83	4	6	144	204	343	2.72e-17	78.6
MsG0380011786.01.T01	MTR_3g014570	35.211	142	80	6	6	141	231	366	6.02e-17	77.8
MsG0380011786.01.T01	MTR_3g013740	34.247	146	80	7	6	142	257	395	1.04e-16	77.4
MsG0380011786.01.T01	MTR_3g011060	35.664	143	80	6	3	140	238	373	1.57e-16	76.6
MsG0380011786.01.T01	MTR_7g067680	40.984	122	56	4	25	142	249	358	1.99e-16	76.3
MsG0380011786.01.T01	MTR_1g055055	39.416	137	74	6	5	137	210	341	9.65e-16	74.3
MsG0380011786.01.T01	MTR_5g057690	37.143	140	77	5	6	141	237	369	1.06e-15	74.3
MsG0380011786.01.T01	MTR_3g009260	37.143	140	77	4	7	139	235	370	1.34e-15	73.9
MsG0380011786.01.T01	MTR_0015s0100	39.024	123	69	5	34	153	132	251	2.72e-15	72.0
MsG0380011786.01.T01	MTR_3g009310	31.915	141	86	5	6	142	245	379	3.35e-15	72.8
MsG0380011786.01.T01	MTR_5g057020	40.909	110	57	3	3	108	229	334	7.31e-15	71.6
MsG0380011786.01.T01	MTR_2g046830	41.758	91	50	2	3	90	219	309	9.89e-15	71.6
MsG0380011786.01.T01	MTR_1g097560	33.824	136	82	4	5	138	226	355	1.20e-14	71.2
MsG0380011786.01.T01	MTR_3g058470	38.095	105	57	4	35	135	248	348	1.79e-14	70.9
MsG0380011786.01.T01	MTR_5g007610	38.462	117	63	4	3	114	251	363	1.27e-13	68.6
MsG0380011786.01.T01	MTR_1g097330	38.686	137	71	8	2	129	204	336	1.99e-13	67.8
MsG0380011786.01.T01	MTR_3g007300	34.058	138	82	5	6	142	224	353	3.06e-13	67.4
MsG0380011786.01.T01	MTR_2g046920	40.230	87	50	2	6	90	222	308	3.08e-13	67.4
MsG0380011786.01.T01	MTR_1g054575	42.697	89	47	3	6	90	244	332	3.15e-12	64.7
MsG0380011786.01.T01	MTR_3g011660	36.522	115	64	3	30	139	1	111	4.11e-12	60.8
MsG0380011786.01.T01	MTR_1g097490	36.220	127	70	5	5	129	245	362	4.15e-12	63.9
MsG0380011786.01.T01	MTR_4g108810	36.691	139	65	7	6	131	80	208	5.17e-12	62.8
MsG0380011786.01.T01	MTR_8g101580	36.090	133	75	6	3	129	238	366	5.49e-12	63.5
MsG0380011786.01.T01	MTR_1g056710	35.115	131	75	5	7	131	236	362	1.20e-11	62.8
MsG0380011786.01.T01	MTR_7g066100	39.823	113	59	6	5	108	235	347	4.27e-11	61.2
MsG0380011786.01.T01	MTR_2g426070	29.697	165	97	8	5	157	225	382	4.78e-11	60.8
MsG0380011786.01.T01	MTR_7g074260	33.117	154	72	5	2	153	97	221	5.32e-11	60.1
MsG0380011786.01.T01	MTR_6g007130	33.645	107	60	4	41	142	4	104	5.54e-11	57.8
MsG0380011786.01.T01	MTR_4g108820	35.556	90	52	2	2	91	207	290	8.31e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 36 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTTCCAAATTATTGTATT+TGG	0.144485	3:+5160947	MsG0380011786.01.T01:CDS
GAAATCCAAATACAATAATT+TGG	0.148971	3:-5160952	None:intergenic
TAGTCTACCTTGCACAATTT+TGG	0.157250	3:-5161055	None:intergenic
CTTCGGTAGAAAATAGAATT+TGG	0.217358	3:-5160974	None:intergenic
CTTCTAAATCCTGATCTTGC+AGG	0.300680	3:-5160782	None:intergenic
GCTGGTGGAGTTTAATGATT+TGG	0.319575	3:+5160842	MsG0380011786.01.T01:CDS
TTGTGAGTGGTGCTGTTAAT+TGG	0.321485	3:+5160526	MsG0380011786.01.T01:CDS
GTTTGGATTATGAAGGAGTA+TGG	0.326969	3:+5160720	MsG0380011786.01.T01:CDS
TTTGACTCATTCTCAAAATC+AGG	0.343466	3:-5160630	None:intergenic
GTGATATGTTCTTGAATGTT+TGG	0.344115	3:+5160703	MsG0380011786.01.T01:CDS
AAATCCTGATCTTGCAGGTT+AGG	0.359302	3:-5160777	None:intergenic
AATGTTAAAAGCAGCAGTTT+TGG	0.363696	3:-5160898	None:intergenic
TTGAGAATGAGTCAAATTCC+TGG	0.425106	3:+5160637	MsG0380011786.01.T01:CDS
TTTCTACCGAAGTTGTTACT+AGG	0.451684	3:+5160985	MsG0380011786.01.T01:CDS
TGTTCCTAACCTGCAAGATC+AGG	0.452202	3:+5160773	MsG0380011786.01.T01:CDS
TTTCTCTTGAATTAGAGAAC+GGG	0.464750	3:+5160586	MsG0380011786.01.T01:CDS
TACTAGGTTGAGTCACGACC+AGG	0.493934	3:+5161001	MsG0380011786.01.T01:CDS
TGTAAACAACCAACTTATCA+TGG	0.498327	3:-5160872	None:intergenic
AGTATGGAAATCAAGAGTCT+TGG	0.499464	3:+5160736	MsG0380011786.01.T01:CDS
CTTGAATGTTTGGATTATGA+AGG	0.501360	3:+5160713	MsG0380011786.01.T01:CDS
GCTCTCTTTAAGACGTTTCG+TGG	0.504785	3:+5161026	MsG0380011786.01.T01:CDS
CTTTCTCTTGAATTAGAGAA+CGG	0.526008	3:+5160585	MsG0380011786.01.T01:CDS
CCTCAGCACATCTAACGTCC+AGG	0.551663	3:-5160655	None:intergenic
GGAAAGTTGCCATGATAAGT+TGG	0.562485	3:+5160863	MsG0380011786.01.T01:CDS
TTCAGACGATGACCAACTGC+TGG	0.570657	3:+5160824	MsG0380011786.01.T01:CDS
TGATTACTCAATCTATGGAT+CGG	0.576187	3:+5160497	None:intergenic
GTTAATTGGTATGCAAAGGA+TGG	0.591659	3:+5160540	MsG0380011786.01.T01:CDS
CTGGACGTTAGATGTGCTGA+GGG	0.601700	3:+5160656	MsG0380011786.01.T01:CDS
AGACGATGACCAACTGCTGG+TGG	0.605968	3:+5160827	MsG0380011786.01.T01:CDS
CATTAAACTCCACCAGCAGT+TGG	0.614948	3:-5160836	None:intergenic
CCTGGACGTTAGATGTGCTG+AGG	0.617769	3:+5160655	MsG0380011786.01.T01:CDS
TGCTGTTAATTGGTATGCAA+AGG	0.640600	3:+5160536	MsG0380011786.01.T01:CDS
GCACTACCCAAAATTGTGCA+AGG	0.646683	3:+5161048	MsG0380011786.01.T01:CDS
ACGTCTTAAAGAGAGCGACC+TGG	0.654665	3:-5161019	None:intergenic
ACTCAACCTAGTAACAACTT+CGG	0.694836	3:-5160991	None:intergenic
GGATCGGAAATATTTGTGAG+TGG	0.712383	3:+5160513	MsG0380011786.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAAATCCAAATACAATAATT+TGG	-	Chr3:5160955-5160974	None:intergenic	20.0%
!!	GATTTCCAAATTATTGTATT+TGG	+	Chr3:5160947-5160966	MsG0380011786.01.T01:CDS	20.0%
!!!	AGTTTCAAAACTGTTGTTTT+TGG	+	Chr3:5160925-5160944	MsG0380011786.01.T01:CDS	25.0%
	CTTCGGTAGAAAATAGAATT+TGG	-	Chr3:5160977-5160996	None:intergenic	30.0%
	CTTGAATGTTTGGATTATGA+AGG	+	Chr3:5160713-5160732	MsG0380011786.01.T01:CDS	30.0%
	CTTTCTCTTGAATTAGAGAA+CGG	+	Chr3:5160585-5160604	MsG0380011786.01.T01:CDS	30.0%
	GTGATATGTTCTTGAATGTT+TGG	+	Chr3:5160703-5160722	MsG0380011786.01.T01:CDS	30.0%
	TGTAAACAACCAACTTATCA+TGG	-	Chr3:5160875-5160894	None:intergenic	30.0%
	TTTCTCTTGAATTAGAGAAC+GGG	+	Chr3:5160586-5160605	MsG0380011786.01.T01:CDS	30.0%
	TTTGACTCATTCTCAAAATC+AGG	-	Chr3:5160633-5160652	None:intergenic	30.0%
!	AATGTTAAAAGCAGCAGTTT+TGG	-	Chr3:5160901-5160920	None:intergenic	30.0%
	ACTCAACCTAGTAACAACTT+CGG	-	Chr3:5160994-5161013	None:intergenic	35.0%
	AGTATGGAAATCAAGAGTCT+TGG	+	Chr3:5160736-5160755	MsG0380011786.01.T01:CDS	35.0%
	GTTAATTGGTATGCAAAGGA+TGG	+	Chr3:5160540-5160559	MsG0380011786.01.T01:CDS	35.0%
	GTTTGGATTATGAAGGAGTA+TGG	+	Chr3:5160720-5160739	MsG0380011786.01.T01:CDS	35.0%
	TGCTGTTAATTGGTATGCAA+AGG	+	Chr3:5160536-5160555	MsG0380011786.01.T01:CDS	35.0%
	TTGAGAATGAGTCAAATTCC+TGG	+	Chr3:5160637-5160656	MsG0380011786.01.T01:CDS	35.0%
	TTTCTACCGAAGTTGTTACT+AGG	+	Chr3:5160985-5161004	MsG0380011786.01.T01:CDS	35.0%
	AAATCCTGATCTTGCAGGTT+AGG	-	Chr3:5160780-5160799	None:intergenic	40.0%
	CTTCTAAATCCTGATCTTGC+AGG	-	Chr3:5160785-5160804	None:intergenic	40.0%
	GCTGGTGGAGTTTAATGATT+TGG	+	Chr3:5160842-5160861	MsG0380011786.01.T01:CDS	40.0%
	GGAAAGTTGCCATGATAAGT+TGG	+	Chr3:5160863-5160882	MsG0380011786.01.T01:CDS	40.0%
	GGATCGGAAATATTTGTGAG+TGG	+	Chr3:5160513-5160532	MsG0380011786.01.T01:CDS	40.0%
!!	TTGTGAGTGGTGCTGTTAAT+TGG	+	Chr3:5160526-5160545	MsG0380011786.01.T01:CDS	40.0%
	CATTAAACTCCACCAGCAGT+TGG	-	Chr3:5160839-5160858	None:intergenic	45.0%
	GCACTACCCAAAATTGTGCA+AGG	+	Chr3:5161048-5161067	MsG0380011786.01.T01:CDS	45.0%
	TGTTCCTAACCTGCAAGATC+AGG	+	Chr3:5160773-5160792	MsG0380011786.01.T01:CDS	45.0%
!!	GCTCTCTTTAAGACGTTTCG+TGG	+	Chr3:5161026-5161045	MsG0380011786.01.T01:CDS	45.0%
	ACGTCTTAAAGAGAGCGACC+TGG	-	Chr3:5161022-5161041	None:intergenic	50.0%
	CTGGACGTTAGATGTGCTGA+GGG	+	Chr3:5160656-5160675	MsG0380011786.01.T01:CDS	50.0%
	TTCAGACGATGACCAACTGC+TGG	+	Chr3:5160824-5160843	MsG0380011786.01.T01:CDS	50.0%
!	TACTAGGTTGAGTCACGACC+AGG	+	Chr3:5161001-5161020	MsG0380011786.01.T01:CDS	50.0%
	AGACGATGACCAACTGCTGG+TGG	+	Chr3:5160827-5160846	MsG0380011786.01.T01:CDS	55.0%
	CCTCAGCACATCTAACGTCC+AGG	-	Chr3:5160658-5160677	None:intergenic	55.0%
	CCTGGACGTTAGATGTGCTG+AGG	+	Chr3:5160655-5160674	MsG0380011786.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	5160510	5161073	5160510	ID=MsG0380011786.01;Name=MsG0380011786.01
Chr3	mRNA	5160510	5161073	5160510	ID=MsG0380011786.01.T01;Parent=MsG0380011786.01;Name=MsG0380011786.01.T01;_AED=0.31;_eAED=0.31;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|187
Chr3	exon	5160510	5161073	5160510	ID=MsG0380011786.01.T01:exon:1180;Parent=MsG0380011786.01.T01
Chr3	CDS	5160510	5161073	5160510	ID=MsG0380011786.01.T01:cds;Parent=MsG0380011786.01.T01
Chr3	mRNA	5160708	5161073	5160708	ID=MsG0380011786.01.T02;Parent=MsG0380011786.01;Name=MsG0380011786.01.T02;_AED=0.47;_eAED=0.47;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|121
Chr3	exon	5160708	5161073	5160708	ID=MsG0380011786.01.T02:exon:1181;Parent=MsG0380011786.01.T02
Chr3	CDS	5160708	5161073	5160708	ID=MsG0380011786.01.T02:cds;Parent=MsG0380011786.01.T02

Gene Sequence

>MsG0380011786.01.T02

ATGTTCTTGAATGTTTGGATTATGAAGGAGTATGGAAATCAAGAGTCTTGGACTAAATTGTACATTGTTCCTAACCTGCAAGATCAGGATTTAGAAGTCAATAGAGCTTTATATATTTCAGACGATGACCAACTGCTGGTGGAGTTTAATGATTTGGAAAGTTGCCATGATAAGTTGGTTGTTTACAACTCCAAAACTGCTGCTTTTAACATTCTTGAGTTTCAAAACTGTTGTTTTTGGATTTCCAAATTATTGTATTTGGATTTCCAAATTCTATTTTCTACCGAAGTTGTTACTAGGTTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGCACTACCCAAAATTGTGCAAGGTAG

>MsG0380011786.01.T01

TATGGATCGGAAATATTTGTGAGTGGTGCTGTTAATTGGTATGCAAAGGATGGATCAGATAGTTTGTACTTCATTCTTTCTCTTGAATTAGAGAACGGGTCATATCGAAAGCTTTATCTACCTGATTTTGAGAATGAGTCAAATTCCTGGACGTTAGATGTGCTGAGGGATTGCTTGTGTATCTTTGAAACTAGTGATATGTTCTTGAATGTTTGGATTATGAAGGAGTATGGAAATCAAGAGTCTTGGACTAAATTGTACATTGTTCCTAACCTGCAAGATCAGGATTTAGAAGTCAATAGAGCTTTATATATTTCAGACGATGACCAACTGCTGGTGGAGTTTAATGATTTGGAAAGTTGCCATGATAAGTTGGTTGTTTACAACTCCAAAACTGCTGCTTTTAACATTCTTGAGTTTCAAAACTGTTGTTTTTGGATTTCCAAATTATTGTATTTGGATTTCCAAATTCTATTTTCTACCGAAGTTGTTACTAGGTTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGCACTACCCAAAATTGTGCAAGGTAG

Protein sequence

>MsG0380011786.01.T02

MFLNVWIMKEYGNQESWTKLYIVPNLQDQDLEVNRALYISDDDQLLVEFNDLESCHDKLVVYNSKTAAFNILEFQNCCFWISKLLYLDFQILFSTEVVTRLSHDQVALFKTFRGTTQNCAR*

>MsG0380011786.01.T01

YGSEIFVSGAVNWYAKDGSDSLYFILSLELENGSYRKLYLPDFENESNSWTLDVLRDCLCIFETSDMFLNVWIMKEYGNQESWTKLYIVPNLQDQDLEVNRALYISDDDQLLVEFNDLESCHDKLVVYNSKTAAFNILEFQNCCFWISKLLYLDFQILFSTEVVTRLSHDQVALFKTFRGTTQNCAR*