Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019285.01.T01 | XP_003605266.2 | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 1.27E-63 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019285.01.T01 | A0AT31 | 77.273 | 110 | 25 | 0 | 4 | 113 | 5 | 114 | 2.13E-55 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019285.01.T01 | I3SVI2 | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 6.05e-64 | 199 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049040.01 | MsG0480019285.01 | 0.819725 | 9.990075e-53 | 7.749559e-50 |
| MsG0180000677.01 | MsG0480019285.01 | 0.804375 | 2.226856e-49 | 1.146319e-46 |
| MsG0180000784.01 | MsG0480019285.01 | 0.814004 | 1.920818e-51 | 1.273783e-48 |
| MsG0180001270.01 | MsG0480019285.01 | 0.811323 | 7.415061e-51 | 4.575838e-48 |
| MsG0180003633.01 | MsG0480019285.01 | 0.808720 | 2.696375e-50 | 1.553002e-47 |
| MsG0180004672.01 | MsG0480019285.01 | 0.837590 | 4.751077e-57 | 6.200686e-54 |
| MsG0180005039.01 | MsG0480019285.01 | 0.805290 | 1.433439e-49 | 7.554786e-47 |
| MsG0180005391.01 | MsG0480019285.01 | 0.812148 | 4.903912e-51 | 3.093806e-48 |
| MsG0180005807.01 | MsG0480019285.01 | 0.803277 | 3.764926e-49 | 1.884107e-46 |
| MsG0480018848.01 | MsG0480019285.01 | 0.838926 | 2.151058e-57 | 2.924269e-54 |
| MsG0480019283.01 | MsG0480019285.01 | 0.922387 | 1.050448e-88 | 3.962729e-84 |
| MsG0480019284.01 | MsG0480019285.01 | 0.946330 | 5.673466e-105 | 9.231638e-100 |
| MsG0480019285.01 | MsG0480019340.01 | 0.846807 | 1.722192e-59 | 2.999858e-56 |
| MsG0480019285.01 | MsG0480019582.01 | 0.827794 | 1.285031e-54 | 1.253367e-51 |
| MsG0480019285.01 | MsG0480021817.01 | 0.819224 | 1.299220e-52 | 9.938343e-50 |
| MsG0480019285.01 | MsG0480022239.01 | 0.801885 | 7.288739e-49 | 3.520665e-46 |
| MsG0480019285.01 | MsG0480022537.01 | 0.813770 | 2.163674e-51 | 1.425690e-48 |
| MsG0480019285.01 | MsG0480022646.01 | 0.807410 | 5.123715e-50 | 2.851860e-47 |
| MsG0480019285.01 | MsG0480022647.01 | 0.819959 | 8.831902e-53 | 6.896240e-50 |
| MsG0480019285.01 | MsG0480023246.01 | 0.809546 | 1.793716e-50 | 1.056182e-47 |
| MsG0480019285.01 | MsG0480023389.01 | 0.800823 | 1.202631e-48 | 5.654682e-46 |
| MsG0480019285.01 | MsG0580024873.01 | 0.815625 | 8.400554e-52 | 5.821958e-49 |
| MsG0480019285.01 | MsG0580025502.01 | 0.802182 | 6.333001e-49 | 3.082002e-46 |
| MsG0480019285.01 | MsG0580027763.01 | 0.808320 | 3.281611e-50 | 1.870620e-47 |
| MsG0480019285.01 | MsG0580028024.01 | 0.808250 | 3.396515e-50 | 1.932578e-47 |
| MsG0480019285.01 | MsG0580028335.01 | 0.800583 | 1.346428e-48 | 6.292495e-46 |
| MsG0480019285.01 | MsG0580029312.01 | 0.832807 | 7.655379e-56 | 8.650993e-53 |
| MsG0480019285.01 | MsG0580029325.01 | 0.800898 | 1.160933e-48 | 5.469392e-46 |
| MsG0480019285.01 | MsG0580029354.01 | 0.800015 | 1.757219e-48 | 8.094571e-46 |
| MsG0480019285.01 | MsG0680031469.01 | 0.807466 | 4.986698e-50 | 2.779639e-47 |
| MsG0480019285.01 | MsG0680032057.01 | 0.806910 | 6.539452e-50 | 3.592694e-47 |
| MsG0480019285.01 | MsG0680034064.01 | 0.806653 | 7.410513e-50 | 4.044076e-47 |
| MsG0480019285.01 | MsG0780035992.01 | 0.803571 | 3.271051e-49 | 1.649519e-46 |
| MsG0480019285.01 | MsG0780037662.01 | 0.824976 | 6.027901e-54 | 5.422791e-51 |
| MsG0480019285.01 | MsG0780040577.01 | 0.801789 | 7.627644e-49 | 3.675179e-46 |
| MsG0480019285.01 | MsG0880042019.01 | 0.840061 | 1.090715e-57 | 1.535800e-54 |
| MsG0480019285.01 | MsG0880042290.01 | 0.803815 | 2.911179e-49 | 1.477211e-46 |
| MsG0480019285.01 | MsG0880046255.01 | 0.833782 | 4.376393e-56 | 5.092354e-53 |
| MsG0480019285.01 | MsG0880046675.01 | 0.810237 | 1.273550e-50 | 7.636190e-48 |
| MsG0480019285.01 | MsG0880047451.01 | 0.832966 | 6.989166e-56 | 7.936280e-53 |
| MsG0480019285.01 | MsG0880047614.01 | 0.857495 | 1.570050e-62 | 3.882618e-59 |
| MsG0480019285.01 | MsG0880047656.01 | 0.820402 | 6.989593e-53 | 5.525298e-50 |
| MsG0380016192.01 | MsG0480019285.01 | 0.807740 | 4.360584e-50 | 2.448000e-47 |
| MsG0380016194.01 | MsG0480019285.01 | 0.801799 | 7.592566e-49 | 3.659198e-46 |
| MsG0380016864.01 | MsG0480019285.01 | 0.800286 | 1.547779e-48 | 7.179257e-46 |
| MsG0380017088.01 | MsG0480019285.01 | 0.804375 | 2.226564e-49 | 1.146187e-46 |
| MsG0280007075.01 | MsG0480019285.01 | 0.829673 | 4.514247e-55 | 4.652231e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480019285.01 | MsG0480019279.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019285.01.T01 | MTR_4g027800 | 88.496 | 113 | 13 | 0 | 1 | 113 | 1 | 113 | 2.62e-67 | 199 |
| MsG0480019285.01.T01 | MTR_4g027840 | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 2.68e-67 | 199 |
| MsG0480019285.01.T01 | MTR_4g428370 | 84.071 | 113 | 18 | 0 | 1 | 113 | 58 | 170 | 1.91e-64 | 194 |
| MsG0480019285.01.T01 | MTR_4g029390 | 66.372 | 113 | 35 | 2 | 1 | 111 | 1 | 112 | 1.10e-45 | 144 |
| MsG0480019285.01.T01 | MTR_4g029350 | 66.372 | 113 | 35 | 2 | 1 | 111 | 1 | 112 | 7.44e-45 | 142 |
| MsG0480019285.01.T01 | MTR_7g072930 | 46.923 | 130 | 60 | 3 | 4 | 125 | 7 | 135 | 1.52e-36 | 122 |
| MsG0480019285.01.T01 | MTR_4g029210 | 50.000 | 112 | 56 | 0 | 1 | 112 | 1 | 112 | 5.38e-32 | 109 |
| MsG0480019285.01.T01 | MTR_4g028190 | 47.458 | 118 | 60 | 2 | 1 | 116 | 5 | 122 | 7.06e-32 | 109 |
| MsG0480019285.01.T01 | MTR_7g073150 | 47.368 | 114 | 56 | 3 | 12 | 122 | 14 | 126 | 9.24e-31 | 107 |
| MsG0480019285.01.T01 | MTR_7g072730 | 40.323 | 124 | 71 | 3 | 4 | 124 | 7 | 130 | 9.06e-29 | 103 |
| MsG0480019285.01.T01 | MTR_7g073170 | 43.636 | 110 | 58 | 3 | 4 | 111 | 7 | 114 | 2.64e-26 | 95.5 |
| MsG0480019285.01.T01 | MTR_7g072830 | 40.000 | 110 | 64 | 1 | 4 | 111 | 7 | 116 | 1.23e-25 | 93.6 |
| MsG0480019285.01.T01 | MTR_7g072960 | 42.149 | 121 | 48 | 4 | 10 | 122 | 12 | 118 | 6.96e-25 | 92.0 |
| MsG0480019285.01.T01 | MTR_7g073120 | 37.302 | 126 | 77 | 1 | 1 | 124 | 5 | 130 | 1.31e-24 | 92.0 |
| MsG0480019285.01.T01 | MTR_7g072993 | 41.935 | 124 | 69 | 1 | 4 | 124 | 7 | 130 | 1.83e-24 | 91.3 |
| MsG0480019285.01.T01 | MTR_4g028180 | 42.017 | 119 | 61 | 4 | 5 | 116 | 9 | 126 | 2.91e-24 | 90.5 |
| MsG0480019285.01.T01 | MTR_4g028310 | 40.000 | 115 | 66 | 1 | 1 | 112 | 1 | 115 | 3.00e-23 | 88.2 |
| MsG0480019285.01.T01 | MTR_2g062600 | 43.689 | 103 | 56 | 2 | 11 | 112 | 11 | 112 | 9.09e-23 | 86.3 |
| MsG0480019285.01.T01 | MTR_7g072980 | 37.398 | 123 | 75 | 1 | 4 | 124 | 7 | 129 | 9.87e-22 | 84.3 |
| MsG0480019285.01.T01 | MTR_7g072900 | 43.243 | 111 | 60 | 2 | 4 | 112 | 7 | 116 | 1.54e-21 | 83.2 |
| MsG0480019285.01.T01 | MTR_7g073130 | 40.517 | 116 | 65 | 4 | 4 | 117 | 7 | 120 | 5.15e-21 | 82.0 |
| MsG0480019285.01.T01 | MTR_4g028250 | 40.351 | 114 | 65 | 2 | 1 | 111 | 1 | 114 | 2.40e-19 | 77.8 |
| MsG0480019285.01.T01 | MTR_7g073100 | 37.600 | 125 | 71 | 2 | 4 | 124 | 7 | 128 | 4.10e-19 | 77.8 |
| MsG0480019285.01.T01 | MTR_3g467100 | 37.963 | 108 | 66 | 1 | 5 | 111 | 3 | 110 | 1.02e-18 | 75.9 |
| MsG0480019285.01.T01 | MTR_7g072810 | 37.903 | 124 | 69 | 3 | 4 | 125 | 7 | 124 | 6.23e-18 | 74.3 |
| MsG0480019285.01.T01 | MTR_1g040335 | 42.727 | 110 | 60 | 2 | 5 | 112 | 8 | 116 | 2.21e-17 | 72.8 |
| MsG0480019285.01.T01 | MTR_7g451500 | 38.202 | 89 | 54 | 1 | 24 | 111 | 7 | 95 | 4.73e-17 | 71.2 |
| MsG0480019285.01.T01 | MTR_7g073030 | 35.772 | 123 | 76 | 3 | 4 | 124 | 7 | 128 | 7.33e-17 | 72.4 |
| MsG0480019285.01.T01 | MTR_7g073060 | 37.838 | 111 | 66 | 3 | 4 | 112 | 7 | 116 | 7.94e-16 | 68.6 |
| MsG0480019285.01.T01 | MTR_4g028360 | 34.211 | 114 | 72 | 3 | 4 | 115 | 1 | 113 | 2.23e-15 | 67.4 |
| MsG0480019285.01.T01 | MTR_3g056640 | 34.545 | 110 | 66 | 3 | 9 | 113 | 12 | 120 | 1.90e-12 | 60.1 |
| MsG0480019285.01.T01 | MTR_3g046350 | 31.373 | 102 | 64 | 3 | 10 | 106 | 13 | 113 | 4.26e-12 | 58.9 |
| MsG0480019285.01.T01 | MTR_3g046515 | 33.333 | 111 | 68 | 4 | 4 | 110 | 11 | 119 | 7.85e-12 | 58.2 |
| MsG0480019285.01.T01 | MTR_7g072987 | 48.529 | 68 | 32 | 2 | 25 | 90 | 57 | 123 | 8.83e-12 | 59.3 |
| MsG0480019285.01.T01 | MTR_3g464130 | 36.667 | 90 | 52 | 3 | 25 | 110 | 18 | 106 | 2.68e-11 | 56.6 |
| MsG0480019285.01.T01 | MTR_3g046530 | 30.435 | 115 | 74 | 3 | 4 | 113 | 7 | 120 | 3.11e-11 | 57.0 |
| MsG0480019285.01.T01 | MTR_1g040330 | 36.937 | 111 | 65 | 4 | 5 | 112 | 8 | 116 | 5.02e-11 | 56.2 |
| MsG0480019285.01.T01 | MTR_3g046540 | 35.556 | 90 | 53 | 3 | 25 | 110 | 31 | 119 | 5.13e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019285.01.T01 | AT2G38540 | 63.158 | 114 | 36 | 6 | 4 | 113 | 5 | 116 | 2.65e-36 | 120 |
| MsG0480019285.01.T01 | AT5G59320 | 59.615 | 104 | 40 | 1 | 8 | 111 | 10 | 111 | 2.70e-36 | 120 |
| MsG0480019285.01.T01 | AT5G59310 | 59.434 | 106 | 38 | 2 | 8 | 113 | 10 | 110 | 6.14e-35 | 117 |
| MsG0480019285.01.T01 | AT2G38530 | 59.292 | 113 | 42 | 4 | 4 | 113 | 5 | 116 | 7.94e-32 | 109 |
| MsG0480019285.01.T01 | AT3G51600 | 52.212 | 113 | 50 | 4 | 4 | 113 | 5 | 116 | 3.68e-28 | 100 |
| MsG0480019285.01.T01 | AT2G15050 | 44.068 | 118 | 60 | 4 | 4 | 115 | 5 | 122 | 3.54e-27 | 97.8 |
| MsG0480019285.01.T01 | AT3G51590 | 45.794 | 107 | 55 | 3 | 6 | 111 | 8 | 112 | 6.25e-26 | 94.4 |
| MsG0480019285.01.T01 | AT2G15050 | 43.966 | 116 | 59 | 4 | 4 | 113 | 5 | 120 | 1.25e-25 | 94.0 |
| MsG0480019285.01.T01 | AT2G15050 | 44.037 | 109 | 57 | 3 | 4 | 108 | 5 | 113 | 7.22e-25 | 91.7 |
| MsG0480019285.01.T01 | AT4G33355 | 50.562 | 89 | 44 | 0 | 23 | 111 | 27 | 115 | 1.05e-24 | 91.3 |
| MsG0480019285.01.T01 | AT4G33355 | 50.562 | 89 | 44 | 0 | 23 | 111 | 27 | 115 | 1.05e-24 | 91.3 |
| MsG0480019285.01.T01 | AT5G01870 | 44.545 | 110 | 53 | 4 | 9 | 111 | 4 | 112 | 1.01e-23 | 89.0 |
| MsG0480019285.01.T01 | AT3G08770 | 45.263 | 95 | 48 | 3 | 22 | 113 | 18 | 111 | 5.92e-19 | 76.6 |
| MsG0480019285.01.T01 | AT3G08770 | 46.237 | 93 | 46 | 3 | 22 | 111 | 18 | 109 | 7.88e-19 | 76.3 |
| MsG0480019285.01.T01 | AT2G18370 | 41.489 | 94 | 53 | 2 | 21 | 113 | 22 | 114 | 1.14e-17 | 73.2 |
| MsG0480019285.01.T01 | AT2G15325 | 33.708 | 89 | 56 | 2 | 27 | 113 | 31 | 118 | 3.22e-11 | 56.6 |
Find 33 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCTGCTGGTGCTATTTC+TGG | 0.136175 | 4:+17750296 | MsG0480019285.01.T01:CDS |
| CCATGCATTGGATATCTTAG+AGG | 0.354250 | 4:+17750173 | MsG0480019285.01.T01:CDS |
| GCTATTTCTGGTTTGAATAC+AGG | 0.359485 | 4:+17750308 | MsG0480019285.01.T01:CDS |
| TTGCAAGCAGCCTGGCGGTC+AGG | 0.369068 | 4:-17750263 | None:intergenic |
| GTCAGGCGTGGTGGTGGCGG+CGG | 0.430334 | 4:-17750246 | None:intergenic |
| GCGGTCAGGCGTGGTGGTGG+CGG | 0.445777 | 4:-17750249 | None:intergenic |
| CTGGCGGTCAGGCGTGGTGG+TGG | 0.447269 | 4:-17750252 | None:intergenic |
| CACCACCACGCCTGACCGCC+AGG | 0.460254 | 4:+17750253 | MsG0480019285.01.T01:CDS |
| GTGCATGATTGTTGCACCTA+TGG | 0.467928 | 4:+17750106 | MsG0480019285.01.T01:CDS |
| GGTGCTCTTTCTCCATGCAT+TGG | 0.474474 | 4:+17750161 | MsG0480019285.01.T01:CDS |
| AGCAGCCTGGCGGTCAGGCG+TGG | 0.477818 | 4:-17750258 | None:intergenic |
| AACTGCTTGAAAAGTGCTGC+TGG | 0.486030 | 4:+17750284 | MsG0480019285.01.T01:CDS |
| TCAAGCAGTTGCAAGCAGCC+TGG | 0.486116 | 4:-17750271 | None:intergenic |
| TCTTCTCTCCCTGGCAAATG+TGG | 0.490642 | 4:+17750338 | MsG0480019285.01.T01:CDS |
| TTCACTCCACCACAGCATGC+TGG | 0.495886 | 4:-17750212 | None:intergenic |
| GGATATCTTAGAGGTGGTGC+TGG | 0.504129 | 4:+17750182 | MsG0480019285.01.T01:CDS |
| GTGGAGGTACTGATCTTGTA+AGG | 0.508470 | 4:-17750371 | None:intergenic |
| ATGTTAACACCACATTTGCC+AGG | 0.518576 | 4:-17750347 | None:intergenic |
| GGCGCAGCTTCTTCTCTCCC+TGG | 0.542091 | 4:+17750329 | MsG0480019285.01.T01:CDS |
| CCACCACAGCATGCTGGAGA+TGG | 0.543598 | 4:-17750206 | None:intergenic |
| CCATCTCCAGCATGCTGTGG+TGG | 0.550747 | 4:+17750206 | MsG0480019285.01.T01:CDS |
| GGTCCATCTCCAGCATGCTG+TGG | 0.560551 | 4:+17750203 | MsG0480019285.01.T01:CDS |
| AGCCTGGCGGTCAGGCGTGG+TGG | 0.562191 | 4:-17750255 | None:intergenic |
| AACATACGTAGCACAGTTGG+TGG | 0.566288 | 4:-17750390 | None:intergenic |
| GAGATTGCAGCATCTGCCAT+AGG | 0.577723 | 4:-17750122 | None:intergenic |
| CCTCTAAGATATCCAATGCA+TGG | 0.598915 | 4:-17750173 | None:intergenic |
| ATGAACATACGTAGCACAGT+TGG | 0.601791 | 4:-17750393 | None:intergenic |
| TGCATTGGATATCTTAGAGG+TGG | 0.623803 | 4:+17750176 | MsG0480019285.01.T01:CDS |
| ATACGTAGCACAGTTGGTGG+AGG | 0.639269 | 4:-17750387 | None:intergenic |
| TGTTAACACCACATTTGCCA+GGG | 0.642773 | 4:-17750346 | None:intergenic |
| AGCAGTTGCAAGCAGCCTGG+CGG | 0.651296 | 4:-17750268 | None:intergenic |
| GCAGATGCTGCAATCTCATG+TGG | 0.654132 | 4:+17750128 | MsG0480019285.01.T01:CDS |
| ATCTCATGTGGACAAGTGAG+TGG | 0.724614 | 4:+17750140 | MsG0480019285.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTATTTCTGGTTTGAATAC+AGG | + | Chr4:17750308-17750327 | MsG0480019285.01.T01:CDS | 35.0% |
| ATGAACATACGTAGCACAGT+TGG | - | Chr4:17750396-17750415 | None:intergenic | 40.0% | |
| ATGTTAACACCACATTTGCC+AGG | - | Chr4:17750350-17750369 | None:intergenic | 40.0% | |
| CCATGCATTGGATATCTTAG+AGG | + | Chr4:17750173-17750192 | MsG0480019285.01.T01:CDS | 40.0% | |
| TGCATTGGATATCTTAGAGG+TGG | + | Chr4:17750176-17750195 | MsG0480019285.01.T01:CDS | 40.0% | |
| TGTTAACACCACATTTGCCA+GGG | - | Chr4:17750349-17750368 | None:intergenic | 40.0% | |
| !! | CCTCTAAGATATCCAATGCA+TGG | - | Chr4:17750176-17750195 | None:intergenic | 40.0% |
| AACATACGTAGCACAGTTGG+TGG | - | Chr4:17750393-17750412 | None:intergenic | 45.0% | |
| ATCTCATGTGGACAAGTGAG+TGG | + | Chr4:17750140-17750159 | MsG0480019285.01.T01:CDS | 45.0% | |
| GTGCATGATTGTTGCACCTA+TGG | + | Chr4:17750106-17750125 | MsG0480019285.01.T01:CDS | 45.0% | |
| !! | AACTGCTTGAAAAGTGCTGC+TGG | + | Chr4:17750284-17750303 | MsG0480019285.01.T01:CDS | 45.0% |
| !! | GTGGAGGTACTGATCTTGTA+AGG | - | Chr4:17750374-17750393 | None:intergenic | 45.0% |
| GAGATTGCAGCATCTGCCAT+AGG | - | Chr4:17750125-17750144 | None:intergenic | 50.0% | |
| GCAGATGCTGCAATCTCATG+TGG | + | Chr4:17750128-17750147 | MsG0480019285.01.T01:CDS | 50.0% | |
| GGATATCTTAGAGGTGGTGC+TGG | + | Chr4:17750182-17750201 | MsG0480019285.01.T01:CDS | 50.0% | |
| GGTGCTCTTTCTCCATGCAT+TGG | + | Chr4:17750161-17750180 | MsG0480019285.01.T01:CDS | 50.0% | |
| TCTTCTCTCCCTGGCAAATG+TGG | + | Chr4:17750338-17750357 | MsG0480019285.01.T01:CDS | 50.0% | |
| !! | AGTGCTGCTGGTGCTATTTC+TGG | + | Chr4:17750296-17750315 | MsG0480019285.01.T01:CDS | 50.0% |
| !! | ATACGTAGCACAGTTGGTGG+AGG | - | Chr4:17750390-17750409 | None:intergenic | 50.0% |
| TCAAGCAGTTGCAAGCAGCC+TGG | - | Chr4:17750274-17750293 | None:intergenic | 55.0% | |
| TTCACTCCACCACAGCATGC+TGG | - | Chr4:17750215-17750234 | None:intergenic | 55.0% | |
| AGCAGTTGCAAGCAGCCTGG+CGG | - | Chr4:17750271-17750290 | None:intergenic | 60.0% | |
| CCACCACAGCATGCTGGAGA+TGG | - | Chr4:17750209-17750228 | None:intergenic | 60.0% | |
| CCATCTCCAGCATGCTGTGG+TGG | + | Chr4:17750206-17750225 | MsG0480019285.01.T01:CDS | 60.0% | |
| GGTCCATCTCCAGCATGCTG+TGG | + | Chr4:17750203-17750222 | MsG0480019285.01.T01:CDS | 60.0% | |
| GGCGCAGCTTCTTCTCTCCC+TGG | + | Chr4:17750329-17750348 | MsG0480019285.01.T01:CDS | 65.0% | |
| TTGCAAGCAGCCTGGCGGTC+AGG | - | Chr4:17750266-17750285 | None:intergenic | 65.0% | |
| AGCAGCCTGGCGGTCAGGCG+TGG | - | Chr4:17750261-17750280 | None:intergenic | 75.0% | |
| AGCCTGGCGGTCAGGCGTGG+TGG | - | Chr4:17750258-17750277 | None:intergenic | 75.0% | |
| CACCACCACGCCTGACCGCC+AGG | + | Chr4:17750253-17750272 | MsG0480019285.01.T01:CDS | 75.0% | |
| CTGGCGGTCAGGCGTGGTGG+TGG | - | Chr4:17750255-17750274 | None:intergenic | 75.0% | |
| !! | GCGGTCAGGCGTGGTGGTGG+CGG | - | Chr4:17750252-17750271 | None:intergenic | 75.0% |
| !! | GTCAGGCGTGGTGGTGGCGG+CGG | - | Chr4:17750249-17750268 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 17750068 | 17750448 | 17750068 | ID=MsG0480019285.01;Name=MsG0480019285.01 |
| Chr4 | mRNA | 17750068 | 17750448 | 17750068 | ID=MsG0480019285.01.T01;Parent=MsG0480019285.01;Name=MsG0480019285.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|126 |
| Chr4 | exon | 17750068 | 17750448 | 17750068 | ID=MsG0480019285.01.T01:exon:4619;Parent=MsG0480019285.01.T01 |
| Chr4 | CDS | 17750068 | 17750448 | 17750068 | ID=MsG0480019285.01.T01:cds;Parent=MsG0480019285.01.T01 |
| Gene Sequence |
| Protein sequence |
