AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029354.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029354.01.T01 MTR_5g084790 98.310 355 6 0 1 355 1 355 0.0 729
MsG0580029354.01.T01 MTR_3g082830 78.116 329 72 0 27 355 33 361 0.0 554
MsG0580029354.01.T01 MTR_3g464730 59.829 351 135 3 10 354 1 351 2.54e-154 437
MsG0580029354.01.T01 MTR_5g084750 59.574 329 133 0 25 353 23 351 1.37e-152 433
MsG0580029354.01.T01 MTR_5g084770 58.769 325 133 1 30 353 26 350 1.53e-145 416
MsG0580029354.01.T01 MTR_2g100620 43.396 318 179 1 30 346 29 346 9.32e-98 294
MsG0580029354.01.T01 MTR_8g014910 42.767 318 181 1 30 346 30 347 4.69e-97 292
MsG0580029354.01.T01 MTR_4g056280 41.908 346 199 1 1 346 1 344 1.47e-93 283
MsG0580029354.01.T01 MTR_8g075200 43.034 323 184 0 31 353 40 362 2.23e-93 285
MsG0580029354.01.T01 MTR_8g075220 40.437 366 201 4 6 354 2 367 4.43e-93 282
MsG0580029354.01.T01 MTR_1g025760 40.331 362 207 4 1 354 42 402 4.78e-93 283
MsG0580029354.01.T01 MTR_5g022630 41.176 357 204 3 3 353 10 366 1.38e-92 281
MsG0580029354.01.T01 MTR_1g025780 41.954 348 196 4 7 354 20 361 3.99e-92 280
MsG0580029354.01.T01 MTR_8g075230 39.489 352 207 1 9 354 7 358 5.49e-92 279
MsG0580029354.01.T01 MTR_5g022640 40.223 358 205 4 3 353 10 365 6.25e-92 280
MsG0580029354.01.T01 MTR_5g074270 41.265 332 191 3 25 353 26 356 1.65e-90 276
MsG0580029354.01.T01 MTR_4g087985 42.730 337 169 6 15 336 20 347 1.64e-88 271
MsG0580029354.01.T01 MTR_2g084585 41.463 328 192 0 15 342 13 340 2.57e-88 270
MsG0580029354.01.T01 MTR_2g015080 42.151 344 185 6 3 336 12 351 4.28e-88 270
MsG0580029354.01.T01 MTR_1g025700 38.827 358 211 3 3 353 14 370 1.30e-86 266
MsG0580029354.01.T01 MTR_3g114090 40.432 324 191 2 31 353 35 357 2.12e-84 260
MsG0580029354.01.T01 MTR_1g025680 40.606 330 194 2 27 355 29 357 2.19e-84 263
MsG0580029354.01.T01 MTR_1g025720 38.415 328 201 1 27 354 32 358 4.19e-83 256
MsG0580029354.01.T01 MTR_3g114120 39.692 325 191 2 30 354 45 364 7.22e-81 251
MsG0580029354.01.T01 MTR_4g056160 37.681 345 210 3 9 350 6 348 1.51e-77 242
MsG0580029354.01.T01 MTR_5g009100 40.127 314 182 6 35 345 49 359 4.28e-72 229
MsG0580029354.01.T01 MTR_5g083040 37.353 340 202 5 24 354 22 359 8.31e-70 223
MsG0580029354.01.T01 MTR_8g062580 82.400 125 18 2 228 349 64 187 1.07e-69 218
MsG0580029354.01.T01 MTR_7g116570 35.542 332 198 7 26 351 28 349 9.57e-69 220
MsG0580029354.01.T01 MTR_1g025910 36.449 321 190 5 37 355 41 349 1.59e-68 220
MsG0580029354.01.T01 MTR_2g044100 39.759 332 186 7 21 343 30 356 1.98e-68 220
MsG0580029354.01.T01 MTR_4g019880 35.629 334 204 8 16 342 15 344 8.55e-68 218
MsG0580029354.01.T01 MTR_7g116500 33.621 348 222 7 1 343 1 344 7.83e-67 215
MsG0580029354.01.T01 MTR_7g116520 34.513 339 210 6 15 347 17 349 1.36e-66 214
MsG0580029354.01.T01 MTR_0565s0010 36.036 333 205 6 15 343 15 343 7.84e-66 213
MsG0580029354.01.T01 MTR_1g069175 34.848 330 203 7 25 349 26 348 1.61e-64 209
MsG0580029354.01.T01 MTR_1g079540 36.522 345 208 9 5 343 3 342 3.23e-64 208
MsG0580029354.01.T01 MTR_7g116510 34.925 335 211 6 17 347 10 341 4.38e-64 208
MsG0580029354.01.T01 MTR_6g021530 33.429 347 222 7 5 346 2 344 1.47e-63 206
MsG0580029354.01.T01 MTR_8g079050 33.983 359 219 8 6 347 2 359 1.47e-63 207
MsG0580029354.01.T01 MTR_5g078210 34.639 332 208 8 15 343 9 334 4.58e-63 205
MsG0580029354.01.T01 MTR_1g079530 37.072 321 184 8 32 346 29 337 7.51e-62 202
MsG0580029354.01.T01 MTR_2g033920 35.530 349 216 6 3 346 6 350 2.64e-61 201
MsG0580029354.01.T01 MTR_8g087890 36.232 345 202 9 6 343 8 341 3.05e-61 201
MsG0580029354.01.T01 MTR_3g024510 35.088 342 212 8 7 343 12 348 1.59e-60 199
MsG0580029354.01.T01 MTR_1g024890 35.110 319 199 6 32 346 32 346 1.69e-60 199
MsG0580029354.01.T01 MTR_8g087870 36.957 322 176 8 29 342 26 328 1.48e-58 193
MsG0580029354.01.T01 MTR_4g035353 32.440 336 221 5 15 347 14 346 2.69e-57 190
MsG0580029354.01.T01 MTR_4g122200 33.433 335 214 6 18 347 21 351 2.90e-57 190
MsG0580029354.01.T01 MTR_2g033930 33.234 337 215 6 17 347 14 346 2.93e-57 190
MsG0580029354.01.T01 MTR_3g435540 33.229 319 203 8 35 348 26 339 3.14e-57 190
MsG0580029354.01.T01 MTR_3g098270 33.754 317 201 6 32 342 34 347 3.03e-56 188
MsG0580029354.01.T01 MTR_7g008060 32.209 326 200 7 25 346 26 334 1.24e-54 183
MsG0580029354.01.T01 MTR_1108s0010 42.925 212 110 1 135 346 3 203 6.13e-54 177
MsG0580029354.01.T01 MTR_4g108690 32.704 318 204 8 35 347 30 342 8.63e-54 181
MsG0580029354.01.T01 MTR_3g005650 32.448 339 218 8 8 343 6 336 9.73e-53 178
MsG0580029354.01.T01 MTR_5g093090 33.430 344 211 9 6 340 4 338 6.15e-52 176
MsG0580029354.01.T01 MTR_2g017875 34.688 320 190 9 29 342 31 337 1.64e-51 175
MsG0580029354.01.T01 MTR_3g052490 33.535 331 203 9 15 335 14 337 1.18e-50 173
MsG0580029354.01.T01 MTR_5g078210 33.651 315 201 7 15 325 9 319 3.42e-50 171
MsG0580029354.01.T01 MTR_8g074560 36.250 320 187 10 27 335 26 339 3.78e-50 172
MsG0580029354.01.T01 MTR_8g022810 34.839 310 191 7 32 335 41 345 2.56e-49 170
MsG0580029354.01.T01 MTR_8g074570 32.070 343 218 7 7 342 16 350 8.49e-49 168
MsG0580029354.01.T01 MTR_2g017925 35.650 331 188 13 19 342 20 332 9.02e-48 166
MsG0580029354.01.T01 MTR_2g017955 36.025 322 185 11 28 342 29 336 3.88e-47 164
MsG0580029354.01.T01 MTR_3g052580 30.904 343 218 9 8 342 8 339 7.05e-47 164
MsG0580029354.01.T01 MTR_3g052580 30.904 343 218 9 8 342 7 338 1.23e-46 164
MsG0580029354.01.T01 MTR_3g005660 32.298 322 207 9 29 343 33 350 2.23e-46 162
MsG0580029354.01.T01 MTR_8g031390 30.841 321 203 9 32 345 37 345 3.67e-46 161
MsG0580029354.01.T01 MTR_8g022790 34.891 321 193 7 29 345 34 342 3.96e-46 161
MsG0580029354.01.T01 MTR_3g052480 32.641 337 209 10 15 340 15 344 1.10e-45 160
MsG0580029354.01.T01 MTR_2g033920 34.471 293 185 4 3 291 6 295 1.12e-44 156
MsG0580029354.01.T01 MTR_8g031420 31.366 322 201 9 32 345 35 344 1.77e-44 157
MsG0580029354.01.T01 MTR_8g031430 31.056 322 202 9 32 345 37 346 1.36e-43 154
MsG0580029354.01.T01 MTR_8g031400 31.875 320 198 9 32 343 37 344 3.95e-43 153
MsG0580029354.01.T01 MTR_3g023220 32.298 322 195 11 26 342 27 330 3.48e-42 150
MsG0580029354.01.T01 MTR_2g017965 32.647 340 206 14 13 342 11 337 7.91e-41 147
MsG0580029354.01.T01 MTR_0009s0250 31.661 319 201 9 27 342 28 332 8.62e-41 147
MsG0580029354.01.T01 MTR_3g021460 31.503 346 207 11 6 342 5 329 1.35e-40 146
MsG0580029354.01.T01 MTR_5g093090 33.220 295 180 8 6 291 4 290 7.32e-40 143
MsG0580029354.01.T01 MTR_8g074580 28.606 409 213 11 4 347 8 402 9.63e-40 145
MsG0580029354.01.T01 MTR_8g031390 31.449 283 179 8 32 311 37 307 1.55e-39 142
MsG0580029354.01.T01 MTR_4g036375 41.040 173 101 1 15 186 13 185 4.62e-38 135
MsG0580029354.01.T01 MTR_5g087690 29.595 321 206 7 30 343 48 355 3.49e-36 135
MsG0580029354.01.T01 MTR_8g022810 31.290 310 149 8 32 335 41 292 6.82e-35 130
MsG0580029354.01.T01 MTR_2g017915 32.177 317 169 15 28 335 29 308 1.02e-34 130
MsG0580029354.01.T01 MTR_5g084880 49.153 118 60 0 180 297 1 118 1.08e-34 124
MsG0580029354.01.T01 MTR_2g461580 29.345 351 208 12 6 342 5 329 2.05e-33 127
MsG0580029354.01.T01 MTR_1g079590 34.450 209 133 3 5 210 4 211 5.06e-33 122
MsG0580029354.01.T01 MTR_7g033150 28.297 364 195 13 27 347 30 370 2.44e-32 125
MsG0580029354.01.T01 MTR_5g074210 39.597 149 88 2 206 353 65 212 3.99e-32 120
MsG0580029354.01.T01 MTR_1g030268 30.383 339 193 14 31 341 39 362 4.26e-31 121
MsG0580029354.01.T01 MTR_8g089805 29.107 347 202 13 31 346 39 372 2.46e-30 119
MsG0580029354.01.T01 MTR_1g030275 27.568 370 213 13 15 350 22 370 2.82e-30 119
MsG0580029354.01.T01 MTR_1g030230 28.739 341 198 12 31 341 31 356 2.18e-29 117
MsG0580029354.01.T01 MTR_6g049230 46.154 130 70 0 198 327 65 194 2.26e-29 112
MsG0580029354.01.T01 MTR_7g033155 27.624 362 199 15 32 346 38 383 2.36e-29 117
MsG0580029354.01.T01 MTR_5g093090 37.755 196 108 7 6 192 4 194 7.52e-29 111
MsG0580029354.01.T01 MTR_7g111780 27.761 335 213 12 27 347 31 350 4.17e-28 113
MsG0580029354.01.T01 MTR_7g087190 25.729 377 233 12 10 351 17 381 1.06e-27 112
MsG0580029354.01.T01 MTR_1g030220 28.488 344 193 13 32 341 40 364 1.23e-27 112
MsG0580029354.01.T01 MTR_1g030340 27.895 380 213 15 5 341 6 367 1.43e-27 112
MsG0580029354.01.T01 MTR_1g060500 29.609 358 195 14 22 354 33 358 2.04e-27 111
MsG0580029354.01.T01 MTR_0127s0040 30.594 219 141 7 130 342 4 217 3.90e-27 107
MsG0580029354.01.T01 MTR_8g028160 25.714 350 217 10 32 351 36 372 8.84e-27 109
MsG0580029354.01.T01 MTR_4g036385 39.655 116 70 0 236 351 18 133 1.42e-26 103
MsG0580029354.01.T01 MTR_7g116870 25.843 356 223 13 13 341 14 355 2.29e-26 108
MsG0580029354.01.T01 MTR_4g056220 43.119 109 62 0 238 346 73 181 7.40e-25 100
MsG0580029354.01.T01 MTR_2g079090 28.571 357 223 13 7 347 3 343 1.41e-24 103
MsG0580029354.01.T01 MTR_2g079080 28.528 326 203 11 36 347 34 343 1.74e-24 102
MsG0580029354.01.T01 MTR_3g463960 28.198 344 212 14 32 351 44 376 2.34e-24 103
MsG0580029354.01.T01 MTR_3g463950 28.198 344 212 14 32 351 44 376 2.34e-24 103
MsG0580029354.01.T01 MTR_3g463970 28.198 344 212 14 32 351 44 376 2.34e-24 103
MsG0580029354.01.T01 MTR_3g463940 28.198 344 212 14 32 351 44 376 2.34e-24 103
MsG0580029354.01.T01 MTR_7g113860 25.956 366 218 13 13 346 15 359 3.81e-24 102
MsG0580029354.01.T01 MTR_0029s0050 28.963 328 199 12 36 347 34 343 5.21e-24 101
MsG0580029354.01.T01 MTR_3g463930 27.635 351 212 13 32 351 44 383 5.65e-24 102
MsG0580029354.01.T01 MTR_2g018015 33.654 208 130 6 22 224 26 230 7.98e-24 100
MsG0580029354.01.T01 MTR_3g438030 27.671 365 238 12 6 351 2 359 9.44e-24 101
MsG0580029354.01.T01 MTR_0029s0100 28.963 328 199 12 36 347 34 343 9.62e-24 100
MsG0580029354.01.T01 MTR_6g007100 25.429 350 231 11 12 347 14 347 1.00e-23 100
MsG0580029354.01.T01 MTR_1g082390 25.556 360 227 11 15 346 14 360 1.07e-23 100
MsG0580029354.01.T01 MTR_3g069780 28.487 337 217 11 32 351 30 359 2.29e-23 100
MsG0580029354.01.T01 MTR_7g113860 24.523 367 223 13 15 346 18 365 2.43e-23 100
MsG0580029354.01.T01 MTR_2g015580 27.941 340 219 12 26 346 41 373 3.45e-23 99.8
MsG0580029354.01.T01 MTR_7g104220 28.571 329 194 14 22 335 32 334 3.53e-23 99.4
MsG0580029354.01.T01 MTR_8g089805 27.622 286 168 10 92 346 27 304 5.96e-23 98.2
MsG0580029354.01.T01 MTR_2g043980 28.158 380 215 17 1 352 1 350 9.40e-23 98.2
MsG0580029354.01.T01 MTR_7g033165 25.788 349 217 11 27 346 28 363 1.22e-22 98.2
MsG0580029354.01.T01 MTR_2g015630 27.545 334 210 14 37 347 36 360 4.94e-22 96.3
MsG0580029354.01.T01 MTR_8g038680 24.513 359 236 11 14 346 8 357 5.67e-22 95.9
MsG0580029354.01.T01 MTR_2g015590 26.816 358 223 12 16 347 15 359 5.97e-22 95.9
MsG0580029354.01.T01 MTR_6g034400 39.024 123 75 0 84 206 3 125 7.36e-22 90.5
MsG0580029354.01.T01 MTR_1g060490 27.385 325 192 14 33 341 38 334 8.37e-22 95.1
MsG0580029354.01.T01 MTR_6g007095 25.788 349 219 11 24 347 33 366 1.14e-21 96.7
MsG0580029354.01.T01 MTR_6g007095 25.503 298 189 9 67 347 401 682 6.83e-20 91.7
MsG0580029354.01.T01 MTR_1g030268 30.249 281 160 12 31 291 39 303 2.12e-21 94.0
MsG0580029354.01.T01 MTR_1g060520 25.867 375 204 13 1 354 1 322 2.92e-21 93.2
MsG0580029354.01.T01 MTR_3g448360 28.906 384 209 19 6 351 2 359 1.59e-20 92.0
MsG0580029354.01.T01 MTR_2g017925 32.727 220 127 10 129 342 25 229 4.55e-20 89.0
MsG0580029354.01.T01 MTR_4g104240 25.294 340 221 12 33 352 40 366 4.81e-20 90.5
MsG0580029354.01.T01 MTR_6g049220 29.570 186 86 1 20 205 18 158 4.86e-20 86.7
MsG0580029354.01.T01 MTR_6g007090 25.714 350 216 12 24 346 31 363 5.41e-20 90.5
MsG0580029354.01.T01 MTR_2g087292 26.937 271 137 6 30 299 31 241 1.19e-19 88.2
MsG0580029354.01.T01 MTR_2g015650 27.697 343 204 15 32 346 31 357 2.52e-19 88.6
MsG0580029354.01.T01 MTR_1g030265 27.083 288 169 10 84 341 53 329 5.11e-19 87.4
MsG0580029354.01.T01 MTR_1g092740 27.019 322 205 12 33 345 39 339 5.62e-19 87.4
MsG0580029354.01.T01 MTR_7g111780 27.650 217 140 6 144 347 39 251 2.11e-18 84.3
MsG0580029354.01.T01 MTR_3g069520 26.503 366 239 12 6 351 2 357 6.30e-18 84.3
MsG0580029354.01.T01 MTR_1g092750 28.344 314 192 13 33 335 41 332 2.28e-17 82.4
MsG0580029354.01.T01 MTR_7g033165 26.471 272 166 9 27 277 28 286 5.16e-17 80.9
MsG0580029354.01.T01 MTR_7g113860 24.042 287 174 9 92 346 17 291 7.36e-17 80.5
MsG0580029354.01.T01 MTR_1g092760 28.793 323 178 14 33 335 40 330 2.63e-16 79.3
MsG0580029354.01.T01 MTR_2g017895 26.277 274 166 12 80 347 5 248 1.11e-14 73.6
MsG0580029354.01.T01 MTR_8g012540 23.684 342 220 12 14 326 8 337 3.69e-13 70.1
MsG0580029354.01.T01 MTR_2g015590 26.846 298 183 11 16 291 15 299 2.43e-12 67.8
MsG0580029354.01.T01 MTR_5g062890 38.144 97 57 3 6 100 3 98 3.27e-11 59.7
MsG0580029354.01.T01 MTR_5g093550 43.662 71 36 2 286 353 71 140 7.83e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029354.01.T01 AT2G04570 63.824 340 120 1 18 354 11 350 1.51e-166 469
MsG0580029354.01.T01 AT2G42990 60.417 336 132 1 15 349 10 345 7.82e-159 449
MsG0580029354.01.T01 AT4G26790 60.182 329 131 0 25 353 22 350 2.97e-148 422
MsG0580029354.01.T01 AT4G26790 60.182 329 131 0 25 353 22 350 2.97e-148 422
MsG0580029354.01.T01 AT5G03810 42.262 336 192 2 9 343 8 342 4.12e-94 285
MsG0580029354.01.T01 AT3G16370 42.138 318 183 1 30 346 28 345 2.27e-91 278
MsG0580029354.01.T01 AT5G03820 40.698 344 198 2 7 346 8 349 2.38e-91 278
MsG0580029354.01.T01 AT5G03820 41.056 341 195 2 7 343 36 374 9.17e-91 277
MsG0580029354.01.T01 AT1G59406 39.385 358 200 6 1 352 1 347 7.09e-90 274
MsG0580029354.01.T01 AT1G59030 39.385 358 200 6 1 352 1 347 7.09e-90 274
MsG0580029354.01.T01 AT1G58725 39.385 358 200 6 1 352 1 347 7.09e-90 274
MsG0580029354.01.T01 AT1G75900 40.308 325 193 1 30 354 41 364 1.39e-89 273
MsG0580029354.01.T01 AT3G14820 42.229 341 182 4 15 344 9 345 1.66e-89 273
MsG0580029354.01.T01 AT3G53100 42.296 331 190 1 13 342 9 339 7.03e-87 266
MsG0580029354.01.T01 AT1G75880 41.049 324 191 0 30 353 50 373 1.74e-86 266
MsG0580029354.01.T01 AT1G58520 39.634 328 184 5 27 352 25 340 2.67e-86 264
MsG0580029354.01.T01 AT1G58525 39.634 328 184 5 27 352 25 340 2.67e-86 264
MsG0580029354.01.T01 AT1G06990 40.798 326 187 3 31 351 36 360 3.01e-86 265
MsG0580029354.01.T01 AT5G42170 38.462 325 197 1 30 354 48 369 1.25e-85 263
MsG0580029354.01.T01 AT5G22810 41.433 321 185 1 25 342 27 347 1.51e-85 263
MsG0580029354.01.T01 AT2G31540 40.549 328 187 5 31 353 34 358 1.63e-85 263
MsG0580029354.01.T01 AT1G75880 40.923 325 191 1 30 353 50 374 3.74e-85 263
MsG0580029354.01.T01 AT5G45960 41.693 319 178 4 25 337 40 356 7.47e-84 259
MsG0580029354.01.T01 AT1G20120 39.077 325 198 0 31 355 77 401 3.54e-82 256
MsG0580029354.01.T01 AT3G43570 38.037 326 170 4 27 352 25 318 7.60e-82 252
MsG0580029354.01.T01 AT5G45950 39.650 343 197 6 15 354 21 356 1.00e-81 253
MsG0580029354.01.T01 AT1G75890 40.810 321 188 2 31 349 46 366 3.21e-81 252
MsG0580029354.01.T01 AT2G24560 39.752 322 190 4 31 349 33 353 3.57e-81 252
MsG0580029354.01.T01 AT1G75890 40.810 321 188 2 31 349 75 395 5.74e-81 252
MsG0580029354.01.T01 AT1G20132 37.539 317 198 0 31 347 60 376 4.71e-79 247
MsG0580029354.01.T01 AT2G30220 39.403 335 195 5 24 355 25 354 9.62e-79 245
MsG0580029354.01.T01 AT2G30310 38.994 318 190 4 31 345 33 349 3.11e-78 244
MsG0580029354.01.T01 AT1G75890 39.222 334 188 3 31 349 46 379 4.91e-78 244
MsG0580029354.01.T01 AT5G63170 41.801 311 167 4 27 336 23 320 1.15e-76 239
MsG0580029354.01.T01 AT1G58430 38.941 321 192 4 25 342 28 347 3.65e-76 239
MsG0580029354.01.T01 AT1G20130 36.607 336 197 3 30 352 182 514 1.78e-74 239
MsG0580029354.01.T01 AT1G20130 36.607 336 197 3 30 352 202 534 2.53e-74 239
MsG0580029354.01.T01 AT1G20135 38.390 323 185 4 15 336 12 321 1.12e-73 231
MsG0580029354.01.T01 AT2G40250 36.474 329 201 3 27 349 31 357 2.93e-73 231
MsG0580029354.01.T01 AT1G73610 36.765 340 195 4 20 353 18 343 4.55e-71 225
MsG0580029354.01.T01 AT3G43550 43.182 264 143 4 30 291 28 286 9.81e-71 223
MsG0580029354.01.T01 AT1G23500 37.394 353 204 4 1 349 1 340 1.58e-69 221
MsG0580029354.01.T01 AT1G75910 36.000 350 202 6 10 349 1 338 1.63e-67 216
MsG0580029354.01.T01 AT2G24560 40.977 266 154 3 31 293 33 298 2.54e-66 212
MsG0580029354.01.T01 AT5G33370 35.860 343 210 7 8 346 8 344 2.14e-65 211
MsG0580029354.01.T01 AT4G10950 36.050 319 198 6 30 345 69 384 2.33e-65 213
MsG0580029354.01.T01 AT1G75920 35.328 351 209 5 3 349 2 338 2.43e-65 211
MsG0580029354.01.T01 AT2G23540 34.743 331 207 6 24 346 40 369 6.37e-64 208
MsG0580029354.01.T01 AT1G29670 36.676 349 209 8 1 343 67 409 1.60e-63 208
MsG0580029354.01.T01 AT1G29670 36.705 346 207 8 4 343 2 341 3.38e-63 206
MsG0580029354.01.T01 AT3G04290 34.024 338 215 6 13 346 10 343 1.59e-62 204
MsG0580029354.01.T01 AT4G10950 35.423 319 196 6 30 345 69 380 2.20e-62 204
MsG0580029354.01.T01 AT3G50400 36.533 323 193 8 30 342 32 352 1.47e-61 202
MsG0580029354.01.T01 AT5G18430 32.704 318 210 3 32 346 28 344 6.33e-60 197
MsG0580029354.01.T01 AT1G75920 34.615 338 190 5 31 349 23 348 7.17e-60 197
MsG0580029354.01.T01 AT4G28780 32.132 333 222 4 16 346 15 345 9.95e-60 197
MsG0580029354.01.T01 AT1G29660 35.057 348 215 7 1 343 1 342 1.62e-58 193
MsG0580029354.01.T01 AT5G37690 33.127 323 208 6 26 345 21 338 1.93e-58 193
MsG0580029354.01.T01 AT1G75930 34.930 355 205 9 3 349 2 338 6.72e-58 191
MsG0580029354.01.T01 AT1G74460 33.236 343 217 10 11 348 4 339 1.28e-56 189
MsG0580029354.01.T01 AT5G41890 32.670 352 215 10 11 347 14 358 1.28e-55 186
MsG0580029354.01.T01 AT5G15720 35.780 327 182 9 31 342 29 342 1.84e-55 186
MsG0580029354.01.T01 AT1G71691 35.562 329 198 10 20 343 43 362 2.11e-55 186
MsG0580029354.01.T01 AT5G45670 33.234 334 213 7 15 343 12 340 3.96e-55 184
MsG0580029354.01.T01 AT5G08460 32.123 358 224 6 2 342 8 363 8.07e-55 184
MsG0580029354.01.T01 AT1G71250 34.049 326 207 6 22 343 31 352 4.35e-54 182
MsG0580029354.01.T01 AT5G37690 32.198 323 203 7 26 345 21 330 1.53e-53 180
MsG0580029354.01.T01 AT4G18970 34.277 318 199 7 31 343 27 339 4.52e-53 179
MsG0580029354.01.T01 AT1G75920 34.899 298 178 4 56 349 25 310 1.26e-52 177
MsG0580029354.01.T01 AT4G18970 34.385 317 198 7 31 342 27 338 1.98e-52 179
MsG0580029354.01.T01 AT1G33811 34.347 329 201 11 25 343 27 350 3.08e-52 177
MsG0580029354.01.T01 AT5G33370 35.764 288 176 6 8 291 8 290 6.54e-50 170
MsG0580029354.01.T01 AT1G71120 34.049 326 200 6 23 343 22 337 2.02e-48 167
MsG0580029354.01.T01 AT1G75920 30.199 351 196 6 3 349 2 307 5.92e-48 164
MsG0580029354.01.T01 AT1G53920 31.412 347 218 8 13 345 21 361 1.60e-47 165
MsG0580029354.01.T01 AT2G31550 35.616 219 134 4 139 353 2 217 2.17e-45 155
MsG0580029354.01.T01 AT2G19010 31.515 330 202 10 29 352 27 338 3.05e-44 155
MsG0580029354.01.T01 AT2G19010 31.515 330 202 10 29 352 57 368 4.18e-44 156
MsG0580029354.01.T01 AT5G40990 32.609 322 205 6 32 345 37 354 2.09e-43 154
MsG0580029354.01.T01 AT1G53940 33.951 324 198 10 32 345 39 356 1.73e-42 152
MsG0580029354.01.T01 AT4G16230 34.538 249 156 4 5 248 2 248 2.02e-42 148
MsG0580029354.01.T01 AT3G14225 31.889 323 206 7 32 345 37 354 4.76e-42 150
MsG0580029354.01.T01 AT1G71691 35.379 277 166 9 20 291 43 311 7.29e-42 149
MsG0580029354.01.T01 AT3G14225 32.110 327 204 8 32 345 37 358 1.38e-41 149
MsG0580029354.01.T01 AT5G55050 31.627 332 210 10 28 350 35 358 2.55e-41 149
MsG0580029354.01.T01 AT2G19060 30.581 327 191 11 30 343 28 331 7.88e-41 147
MsG0580029354.01.T01 AT2G19050 30.462 325 194 9 29 343 28 330 9.61e-41 146
MsG0580029354.01.T01 AT5G15720 35.507 276 151 8 31 291 29 292 1.69e-40 145
MsG0580029354.01.T01 AT2G03980 31.677 322 198 12 31 342 42 351 4.61e-39 142
MsG0580029354.01.T01 AT2G03980 31.677 322 198 12 31 342 42 351 4.61e-39 142
MsG0580029354.01.T01 AT2G03980 31.677 322 198 12 31 342 42 351 4.61e-39 142
MsG0580029354.01.T01 AT2G03980 31.677 322 198 12 31 342 42 351 4.61e-39 142
MsG0580029354.01.T01 AT4G30140 31.250 320 196 11 29 343 30 330 1.19e-37 138
MsG0580029354.01.T01 AT2G19050 33.600 250 149 8 29 273 28 265 2.00e-34 128
MsG0580029354.01.T01 AT1G53990 30.341 323 204 8 32 345 35 345 2.72e-34 130
MsG0580029354.01.T01 AT1G71691 31.128 257 165 8 92 343 12 261 8.64e-33 124
MsG0580029354.01.T01 AT5G15720 30.827 266 159 7 92 342 56 311 8.75e-33 125
MsG0580029354.01.T01 AT1G53940 35.094 265 161 9 32 291 39 297 1.17e-31 121
MsG0580029354.01.T01 AT2G04020 36.816 201 116 7 31 227 42 235 1.78e-31 119
MsG0580029354.01.T01 AT2G04020 36.364 209 122 7 31 235 42 243 2.91e-31 120
MsG0580029354.01.T01 AT1G54020 28.363 342 212 13 15 345 11 330 1.43e-30 120
MsG0580029354.01.T01 AT1G09390 28.443 334 207 12 31 347 36 354 1.71e-29 117
MsG0580029354.01.T01 AT1G56670 28.701 331 210 12 31 347 39 357 2.42e-29 116
MsG0580029354.01.T01 AT1G28640 28.800 375 229 17 5 351 3 367 2.81e-29 116
MsG0580029354.01.T01 AT1G54010 27.729 339 220 9 10 340 12 333 1.83e-28 114
MsG0580029354.01.T01 AT1G54030 29.582 311 188 12 33 338 53 337 2.39e-28 114
MsG0580029354.01.T01 AT3G14220 27.964 329 200 11 27 342 27 331 2.53e-28 113
MsG0580029354.01.T01 AT3G26430 29.189 370 218 15 7 345 6 362 4.07e-28 113
MsG0580029354.01.T01 AT1G54790 25.205 365 237 10 8 346 8 362 4.37e-28 113
MsG0580029354.01.T01 AT3G27950 27.954 347 209 12 26 347 26 356 1.38e-27 112
MsG0580029354.01.T01 AT1G28660 29.491 373 219 18 5 346 3 362 1.83e-27 111
MsG0580029354.01.T01 AT3G05180 26.685 356 209 12 25 346 29 366 2.77e-27 111
MsG0580029354.01.T01 AT1G28650 29.377 337 207 16 29 343 34 361 8.64e-27 109
MsG0580029354.01.T01 AT1G28600 29.268 369 217 16 10 346 1 357 9.96e-27 109
MsG0580029354.01.T01 AT1G28610 28.415 366 220 15 5 342 2 353 1.24e-26 109
MsG0580029354.01.T01 AT1G31550 28.530 347 198 15 32 347 36 363 1.76e-26 108
MsG0580029354.01.T01 AT5G14450 25.745 369 233 11 12 350 18 375 1.98e-26 108
MsG0580029354.01.T01 AT5G03610 28.829 333 209 12 33 355 44 358 2.10e-26 108
MsG0580029354.01.T01 AT1G28660 29.491 373 218 19 5 346 3 361 3.31e-26 108
MsG0580029354.01.T01 AT1G28570 29.565 345 198 16 32 347 34 362 3.77e-26 108
MsG0580029354.01.T01 AT1G28670 30.084 359 214 17 5 335 3 352 1.28e-25 106
MsG0580029354.01.T01 AT1G67830 26.316 342 208 12 31 341 29 357 1.56e-25 106
MsG0580029354.01.T01 AT1G28580 28.280 343 203 15 32 346 37 364 1.67e-25 106
MsG0580029354.01.T01 AT1G54000 26.393 341 226 9 10 342 12 335 4.40e-25 105
MsG0580029354.01.T01 AT3G62280 27.941 340 209 13 27 350 31 350 6.96e-25 104
MsG0580029354.01.T01 AT1G31550 27.746 346 199 15 32 347 36 360 8.81e-24 101
MsG0580029354.01.T01 AT2G27360 28.488 344 208 14 32 351 33 362 1.45e-23 100
MsG0580029354.01.T01 AT1G54790 23.416 363 239 11 13 346 9 361 2.00e-23 100
MsG0580029354.01.T01 AT5G45910 29.855 345 214 15 25 346 23 362 2.33e-23 100
MsG0580029354.01.T01 AT4G01130 26.016 369 228 14 12 347 10 366 1.82e-22 97.8
MsG0580029354.01.T01 AT3G14210 30.211 331 196 14 26 342 28 337 3.25e-22 97.1
MsG0580029354.01.T01 AT3G09930 27.479 353 209 14 22 354 29 354 3.42e-21 93.6
MsG0580029354.01.T01 AT3G09930 27.479 353 209 14 22 354 29 354 3.42e-21 93.6
MsG0580029354.01.T01 AT1G28590 26.100 341 215 13 32 347 36 364 8.55e-21 93.2
MsG0580029354.01.T01 AT3G48460 25.485 361 227 13 16 347 15 362 8.62e-20 90.1
MsG0580029354.01.T01 AT1G54790 22.365 389 237 13 13 346 9 387 3.20e-19 88.6
MsG0580029354.01.T01 AT1G54030 28.992 238 143 9 33 266 53 268 3.35e-19 87.4
MsG0580029354.01.T01 AT4G16220 39.496 119 69 2 5 122 2 118 2.02e-17 81.3
MsG0580029354.01.T01 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MsG0580029354.01.T01 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MsG0580029354.01.T01 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MsG0580029354.01.T01 AT1G56670 27.306 271 175 11 31 291 39 297 1.33e-16 79.7
MsG0580029354.01.T01 AT1G54020 26.562 192 130 5 159 345 10 195 8.10e-16 76.3
MsG0580029354.01.T01 AT4G01130 26.269 335 197 13 12 325 10 315 8.25e-16 77.8
MsG0580029354.01.T01 AT4G16233 37.143 105 64 2 240 343 6 109 3.62e-15 72.0
MsG0580029354.01.T01 AT4G01130 23.810 273 174 8 104 347 13 280 4.22e-15 75.5
MsG0580029354.01.T01 AT5G03980 23.176 233 161 7 131 353 94 318 5.92e-15 75.1
MsG0580029354.01.T01 AT5G03600 25.228 329 188 14 29 336 11 302 1.16e-14 74.3
MsG0580029354.01.T01 AT5G03600 25.228 329 188 14 29 336 46 337 1.21e-14 74.7
MsG0580029354.01.T01 AT1G28580 24.739 287 183 12 82 346 8 283 4.00e-14 72.8
MsG0580029354.01.T01 AT2G36325 26.625 323 197 15 29 336 44 341 4.23e-14 73.2
MsG0580029354.01.T01 AT1G28570 26.316 209 131 9 155 347 89 290 4.22e-12 66.6
MsG0580029354.01.T01 AT1G28570 26.829 205 127 9 159 347 2 199 7.34e-12 64.7
MsG0580029354.01.T01 AT3G14210 28.272 191 127 6 159 342 22 209 6.29e-11 62.8

Find 79 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACACCAATTTCATATC+AGG 0.225456 5:-95911165 None:intergenic
ATCAGTACACCTTATGAGTA+TGG 0.279152 5:+95910849 MsG0580029354.01.T01:CDS
GATGTGCAACATAATGTAAT+AGG 0.286354 5:-95911193 None:intergenic
GTGTATTGTGATGCCCTTCC+TGG 0.317232 5:-95910907 None:intergenic
ATGCTTCAAAGTTTGTCTTT+TGG 0.324981 5:+95911426 MsG0580029354.01.T01:CDS
AGAATTTGTGCCTGCTTACT+TGG 0.325164 5:+95909256 MsG0580029354.01.T01:CDS
TGGAATGAAGTTGTTGTTCC+CGG 0.361945 5:-95909114 None:intergenic
GATTTCATAGCAGAATCTTT+TGG 0.368924 5:+95909227 MsG0580029354.01.T01:CDS
GGAGCTCCCTGATATGAAAT+TGG 0.378851 5:+95911158 MsG0580029354.01.T01:CDS
ATGTGCAACATAATGTAATA+GGG 0.391121 5:-95911192 None:intergenic
GATATGAACTTAGATTCTTT+TGG 0.398361 5:-95910792 None:intergenic
AAAATCTGAAATATTATACT+TGG 0.402632 5:-95909282 None:intergenic
CTATTCCAGCAAGAAAAGTT+TGG 0.411958 5:-95910942 None:intergenic
TGCAGTCTGTGATACCATTA+TGG 0.412290 5:+95910743 MsG0580029354.01.T01:intron
TCTCCCATTTGAGAATCTTC+CGG 0.414628 5:-95909195 None:intergenic
AAGAATCTAAGTTCATATCT+TGG 0.420264 5:+95910796 MsG0580029354.01.T01:CDS
TACTCTAATTGCTTCCATAA+TGG 0.422659 5:-95910757 None:intergenic
CCATGGGTGGTAACCCTCCC+AGG 0.433970 5:-95911014 None:intergenic
CGTTTGTTCCCATACTCATA+AGG 0.435161 5:-95910858 None:intergenic
ATAAGGAATCTATATGCTCT+TGG 0.438892 5:+95910976 MsG0580029354.01.T01:CDS
AAGTGCTATGTTATTAAAGT+TGG 0.444135 5:-95911091 None:intergenic
ACTCATAAGGTGTACTGATT+CGG 0.453701 5:-95910845 None:intergenic
TCAGTGGCATGTTGTGCTAC+TGG 0.455491 5:+95911350 MsG0580029354.01.T01:CDS
TCTCCGAACACGATTATTGC+TGG 0.455962 5:-95909077 None:intergenic
AGATGGGTTATGCATGCAGC+AGG 0.458302 5:+95911381 MsG0580029354.01.T01:CDS
CCGTATGGACGTGACTTTCA+AGG 0.470414 5:+95909161 MsG0580029354.01.T01:CDS
TGCTACTGGAATGTTTGAGA+TGG 0.473918 5:+95911364 MsG0580029354.01.T01:CDS
GGAGACTCCTCCGTTGATGC+CGG 0.479996 5:+95909095 MsG0580029354.01.T01:CDS
GCGACCGGAAGATTCTCAAA+TGG 0.482919 5:+95909191 MsG0580029354.01.T01:CDS
CTCCAATGGCAAACATCCCA+TGG 0.486462 5:-95911031 None:intergenic
CGACCGGAAGATTCTCAAAT+GGG 0.487611 5:+95909192 MsG0580029354.01.T01:CDS
AAGGTGTACTGATTCGGATA+TGG 0.497094 5:-95910839 None:intergenic
GAGAATTACTATACCATGCC+AGG 0.498472 5:+95910889 MsG0580029354.01.T01:CDS
TATTACCACTAAGCTCAATC+AGG 0.501679 5:+95911137 MsG0580029354.01.T01:CDS
AAAACACCAATTTCATATCA+GGG 0.503521 5:-95911164 None:intergenic
CCTGGGAGGGTTACCACCCA+TGG 0.510734 5:+95911014 MsG0580029354.01.T01:CDS
TGGTGCTAGAAAGATATCCC+TGG 0.520711 5:+95910996 MsG0580029354.01.T01:CDS
ACCCATGGGATGTTTGCCAT+TGG 0.522109 5:+95911029 MsG0580029354.01.T01:CDS
AAATTGCTCCGTGCAACCGT+TGG 0.523069 5:-95909134 None:intergenic
GAGACTCCTCCGTTGATGCC+GGG 0.523625 5:+95909096 MsG0580029354.01.T01:CDS
GTTCCAGCAATAATCGTGTT+CGG 0.526753 5:+95909074 MsG0580029354.01.T01:CDS
GAGCTCCTGATTGAGCTTAG+TGG 0.529769 5:-95911142 None:intergenic
TTGTGATGCCCTTCCTGGCA+TGG 0.538947 5:-95910902 None:intergenic
AGTAACATACCATAGAGGTC+AGG 0.548702 5:-95911225 None:intergenic
TACTTGGGATCCAAGTAAGC+AGG 0.549355 5:-95909266 None:intergenic
AAATTTGTAGTTCTCTCCAA+TGG 0.550093 5:-95911045 None:intergenic
CCTTGAAAGTCACGTCCATA+CGG 0.564611 5:-95909161 None:intergenic
GATTCTGCTATGAAATCAGT+TGG 0.565554 5:-95909221 None:intergenic
TTTCAAGGCGGAAAAGCGAC+CGG 0.566456 5:+95909176 MsG0580029354.01.T01:CDS
GCTACTGGAATGTTTGAGAT+GGG 0.566722 5:+95911365 MsG0580029354.01.T01:CDS
TTTGAACAAGGCAAGTGCAA+AGG 0.567797 5:+95909052 MsG0580029354.01.T01:CDS
GAATAGCTGAGAATTTCATA+AGG 0.571068 5:+95910959 MsG0580029354.01.T01:CDS
AAATCTGAAATATTATACTT+GGG 0.571126 5:-95909281 None:intergenic
ATTACTATACCATGCCAGGA+AGG 0.575232 5:+95910893 MsG0580029354.01.T01:CDS
GTTGTTGTTCCCGGCATCAA+CGG 0.579965 5:-95909105 None:intergenic
AGAAAAGTTTGGTACTGTTG+AGG 0.580826 5:-95910931 None:intergenic
ACTTCATTCCAACGGTTGCA+CGG 0.585179 5:+95909126 MsG0580029354.01.T01:CDS
TCAGTACACCTTATGAGTAT+GGG 0.589424 5:+95910850 MsG0580029354.01.T01:CDS
GCATGGTATAGTAATTCTCT+AGG 0.589788 5:-95910885 None:intergenic
TTACTATACCATGCCAGGAA+GGG 0.595748 5:+95910894 MsG0580029354.01.T01:CDS
ATGGGTTATGCATGCAGCAG+GGG 0.597736 5:+95911383 MsG0580029354.01.T01:CDS
CTGGGAGGGTTACCACCCAT+GGG 0.599154 5:+95911015 MsG0580029354.01.T01:CDS
GGTGCTAGAAAGATATCCCT+GGG 0.601039 5:+95910997 MsG0580029354.01.T01:CDS
AAAGAGGCACAAAATGTGAA+AGG 0.607423 5:-95909021 None:intergenic
TCCAATGGCAAACATCCCAT+GGG 0.610270 5:-95911030 None:intergenic
TAACATTGTTGCAAAGTATG+TGG 0.619153 5:+95911478 MsG0580029354.01.T01:CDS
GATGGGTTATGCATGCAGCA+GGG 0.629763 5:+95911382 MsG0580029354.01.T01:CDS
GTTGTTCCCGGCATCAACGG+AGG 0.634142 5:-95909102 None:intergenic
CTAGAAAGATATCCCTGGGA+GGG 0.636827 5:+95911001 MsG0580029354.01.T01:CDS
AATGGCAAACATCCCATGGG+TGG 0.645847 5:-95911027 None:intergenic
AGGGTTTGAATCAGCCTCAG+TGG 0.649535 5:+95911334 MsG0580029354.01.T01:intron
CATGGGTGGTAACCCTCCCA+GGG 0.659719 5:-95911013 None:intergenic
GAACAACAACTTCATTCCAA+CGG 0.663264 5:+95909118 MsG0580029354.01.T01:CDS
CATTGTTGCAAAGTATGTGG+TGG 0.685608 5:+95911481 MsG0580029354.01.T01:CDS
GTTGCAGTAACATACCATAG+AGG 0.695475 5:-95911230 None:intergenic
GAAGCAATTAGAGTACTACA+AGG 0.704539 5:+95910765 MsG0580029354.01.T01:CDS
AGTAGCACAACATGCCACTG+AGG 0.730566 5:-95911348 None:intergenic
GCTAGAAAGATATCCCTGGG+AGG 0.731178 5:+95911000 MsG0580029354.01.T01:CDS
TATGGACGTGACTTTCAAGG+CGG 0.774143 5:+95909164 MsG0580029354.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAAAAATATTA+TGG + Chr5:95910569-95910588 MsG0580029354.01.T01:intron 0.0%
!! AAGAAATTAAAAAAATTTAG+AGG - Chr5:95910285-95910304 None:intergenic 10.0%
!! AATATTTATGAAAACTAATT+TGG + Chr5:95910047-95910066 MsG0580029354.01.T01:intron 10.0%
!! AGAAATTAAAAAAATTTAGA+GGG - Chr5:95910284-95910303 None:intergenic 10.0%
!! ATATTTATGAAAACTAATTT+GGG + Chr5:95910048-95910067 MsG0580029354.01.T01:intron 10.0%
!! GTTAATTCAAAATAAATAAA+TGG + Chr5:95910187-95910206 MsG0580029354.01.T01:intron 10.0%
!!! AAAATTGTTTTGTTTTTAAT+TGG + Chr5:95909745-95909764 MsG0580029354.01.T01:intron 10.0%
!!! AAAATTTTTCATTTTGTTTT+TGG - Chr5:95910460-95910479 None:intergenic 10.0%
!! ACAAATTAATTAAAAGGAAA+TGG - Chr5:95910149-95910168 None:intergenic 15.0%
!! ATTAATATGAACATAAAGTA+GGG - Chr5:95910310-95910329 None:intergenic 15.0%
!! TTTATGTTCATATTAATGTA+AGG + Chr5:95910313-95910332 MsG0580029354.01.T01:intron 15.0%
!!! AAAATCTGAAATATTATACT+TGG - Chr5:95909285-95909304 None:intergenic 15.0%
!!! AAATCTGAAATATTATACTT+GGG - Chr5:95909284-95909303 None:intergenic 15.0%
!!! AATATTTTTCTTTTGTTAAC+AGG + Chr5:95911314-95911333 MsG0580029354.01.T01:intron 15.0%
!!! ATATTTTTCTTTTGTTAACA+GGG + Chr5:95911315-95911334 MsG0580029354.01.T01:intron 15.0%
!!! CAATTTTTTTTAAACTCATT+TGG - Chr5:95909732-95909751 None:intergenic 15.0%
!!! CTCTAAAAATATAGTAAATT+TGG - Chr5:95910521-95910540 None:intergenic 15.0%
!! AAAAAAAAAAGTGAAGTAAG+TGG - Chr5:95909515-95909534 None:intergenic 20.0%
!! ATTTATAATGTGCTTCATAA+TGG - Chr5:95911291-95911310 None:intergenic 20.0%
!! ATTTGGTCATAAAATTATGA+TGG + Chr5:95909807-95909826 MsG0580029354.01.T01:intron 20.0%
!! CATTAATATGAACATAAAGT+AGG - Chr5:95910311-95910330 None:intergenic 20.0%
!! TCAGTCTCTTAAAAATAAAA+CGG + Chr5:95910248-95910267 MsG0580029354.01.T01:intron 20.0%
!! TCATAAATATTTAAAGACAC+CGG - Chr5:95910038-95910057 None:intergenic 20.0%
!! TGAAATCAAAATTCACTTTA+TGG - Chr5:95910231-95910250 None:intergenic 20.0%
!!! AGTTATATTTTCCACAAATA+TGG + Chr5:95909970-95909989 MsG0580029354.01.T01:intron 20.0%
!!! ATTTTAAAAGTATATGTGTG+TGG + Chr5:95910593-95910612 MsG0580029354.01.T01:intron 20.0%
!!! CAAAATGAAAAATTTTTCGA+AGG + Chr5:95910464-95910483 MsG0580029354.01.T01:intron 20.0%
!!! TACAATACATGTTTAGTTTT+AGG + Chr5:95909423-95909442 MsG0580029354.01.T01:intron 20.0%
!!! TTAGTTTTAGGAACTTTTTT+TGG + Chr5:95909435-95909454 MsG0580029354.01.T01:intron 20.0%
!!! TTTAGAGTTTAATAAGTTCT+TGG - Chr5:95910545-95910564 None:intergenic 20.0%
!!! TTTTTTTTCATGCAAGATTT+TGG + Chr5:95909529-95909548 MsG0580029354.01.T01:intron 20.0%
! AAAACACCAATTTCATATCA+GGG - Chr5:95911167-95911186 None:intergenic 25.0%
! AAGAATCTAAGTTCATATCT+TGG + Chr5:95910796-95910815 MsG0580029354.01.T01:CDS 25.0%
! AAGTGCTATGTTATTAAAGT+TGG - Chr5:95911094-95911113 None:intergenic 25.0%
! ACATTTCTTGAACACAATAT+GGG - Chr5:95910404-95910423 None:intergenic 25.0%
! ACTGAAAACAAGAAATGTAA+AGG + Chr5:95909600-95909619 MsG0580029354.01.T01:intron 25.0%
! ATGTGCAACATAATGTAATA+GGG - Chr5:95911195-95911214 None:intergenic 25.0%
! CAGTCTCTTAAAAATAAAAC+GGG + Chr5:95910249-95910268 MsG0580029354.01.T01:intron 25.0%
! CTGAAAACAAGAAATGTAAA+GGG + Chr5:95909601-95909620 MsG0580029354.01.T01:intron 25.0%
! GTCAAAAATTATGTCCATTA+GGG + Chr5:95910433-95910452 MsG0580029354.01.T01:intron 25.0%
! TGAAAACAAGAAATGTAAAG+GGG + Chr5:95909602-95909621 MsG0580029354.01.T01:intron 25.0%
! TGTACAAAAATTGAAGAGAA+GGG + Chr5:95909846-95909865 MsG0580029354.01.T01:intron 25.0%
! TGTCAAAAATTATGTCCATT+AGG + Chr5:95910432-95910451 MsG0580029354.01.T01:intron 25.0%
! TGTTCAAATGAAACAAAAAG+AGG - Chr5:95909040-95909059 None:intergenic 25.0%
! TTGTACAAAAATTGAAGAGA+AGG + Chr5:95909845-95909864 MsG0580029354.01.T01:intron 25.0%
! TTTATACGTTTCCATATTTG+TGG - Chr5:95909984-95910003 None:intergenic 25.0%
!! AATATTTCAGATTTTGCAAC+TGG + Chr5:95909290-95909309 MsG0580029354.01.T01:CDS 25.0%
!! ATATTTCAGATTTTGCAACT+GGG + Chr5:95909291-95909310 MsG0580029354.01.T01:CDS 25.0%
!! GAGAGAACTACAAATTTTAT+GGG + Chr5:95911051-95911070 MsG0580029354.01.T01:CDS 25.0%
!! GATATGAACTTAGATTCTTT+TGG - Chr5:95910795-95910814 None:intergenic 25.0%
!!! AATGTTATTTGTTTTCTCTG+TGG - Chr5:95911465-95911484 None:intergenic 25.0%
!!! ATGTTATTTGTTTTCTCTGT+GGG - Chr5:95911464-95911483 None:intergenic 25.0%
!!! CTTTTTGTTTCATTTGAACA+AGG + Chr5:95909040-95909059 MsG0580029354.01.T01:CDS 25.0%
!!! TTTTAGGAACTTTTTTTGGT+TGG + Chr5:95909439-95909458 MsG0580029354.01.T01:intron 25.0%
!!! TTTTTGCTATAGTAGAAACA+TGG - Chr5:95910080-95910099 None:intergenic 25.0%
AAATTTGTAGTTCTCTCCAA+TGG - Chr5:95911048-95911067 None:intergenic 30.0%
ATAAAAAAACCTGACCTCTA+TGG + Chr5:95911216-95911235 MsG0580029354.01.T01:CDS 30.0%
ATAAGGAATCTATATGCTCT+TGG + Chr5:95910976-95910995 MsG0580029354.01.T01:CDS 30.0%
ATTGTGTTCAAGAAATGTCA+TGG + Chr5:95910406-95910425 MsG0580029354.01.T01:intron 30.0%
GAAAACACCAATTTCATATC+AGG - Chr5:95911168-95911187 None:intergenic 30.0%
GAATAGCTGAGAATTTCATA+AGG + Chr5:95910959-95910978 MsG0580029354.01.T01:CDS 30.0%
GACATTTCTTGAACACAATA+TGG - Chr5:95910405-95910424 None:intergenic 30.0%
GATGTGCAACATAATGTAAT+AGG - Chr5:95911196-95911215 None:intergenic 30.0%
GTTTGAGTATTAAGAGAAGA+TGG - Chr5:95909377-95909396 None:intergenic 30.0%
TAACATTGTTGCAAAGTATG+TGG + Chr5:95911478-95911497 MsG0580029354.01.T01:CDS 30.0%
TACTCTAATTGCTTCCATAA+TGG - Chr5:95910760-95910779 None:intergenic 30.0%
! ACAAATTTTATGGGTCAGAA+TGG + Chr5:95911060-95911079 MsG0580029354.01.T01:CDS 30.0%
! ATGCTTCAAAGTTTGTCTTT+TGG + Chr5:95911426-95911445 MsG0580029354.01.T01:CDS 30.0%
! GATTTCATAGCAGAATCTTT+TGG + Chr5:95909227-95909246 MsG0580029354.01.T01:CDS 30.0%
! GGAGAGAACTACAAATTTTA+TGG + Chr5:95911050-95911069 MsG0580029354.01.T01:CDS 30.0%
! TATTTCAGATTTTGCAACTG+GGG + Chr5:95909292-95909311 MsG0580029354.01.T01:CDS 30.0%
! TGCTTCAAAGTTTGTCTTTT+GGG + Chr5:95911427-95911446 MsG0580029354.01.T01:CDS 30.0%
!! AGACACATTTTGAAGATACA+AGG - Chr5:95910346-95910365 None:intergenic 30.0%
!! GACACATTTTGAAGATACAA+GGG - Chr5:95910345-95910364 None:intergenic 30.0%
!! TCTCTTGTTATTGTTTCTCT+AGG + Chr5:95909667-95909686 MsG0580029354.01.T01:intron 30.0%
!!! ATTTTGTTTTTGGTCCCTAA+TGG - Chr5:95910450-95910469 None:intergenic 30.0%
!!! TTCTTGTTTTCAGTTTCACT+TGG - Chr5:95909594-95909613 None:intergenic 30.0%
AGAAAAGTTTGGTACTGTTG+AGG - Chr5:95910934-95910953 None:intergenic 35.0%
ATCAGTACACCTTATGAGTA+TGG + Chr5:95910849-95910868 MsG0580029354.01.T01:CDS 35.0%
CTATTCCAGCAAGAAAAGTT+TGG - Chr5:95910945-95910964 None:intergenic 35.0%
GAACAACAACTTCATTCCAA+CGG + Chr5:95909118-95909137 MsG0580029354.01.T01:CDS 35.0%
GATTCTGCTATGAAATCAGT+TGG - Chr5:95909224-95909243 None:intergenic 35.0%
GCATGGTATAGTAATTCTCT+AGG - Chr5:95910888-95910907 None:intergenic 35.0%
TATTACCACTAAGCTCAATC+AGG + Chr5:95911137-95911156 MsG0580029354.01.T01:CDS 35.0%
TCAGTACACCTTATGAGTAT+GGG + Chr5:95910850-95910869 MsG0580029354.01.T01:CDS 35.0%
TTGAACACAATATGGGCATA+CGG - Chr5:95910397-95910416 None:intergenic 35.0%
! AAAGAGGCACAAAATGTGAA+AGG - Chr5:95909024-95909043 None:intergenic 35.0%
! GAAGCAATTAGAGTACTACA+AGG + Chr5:95910765-95910784 MsG0580029354.01.T01:CDS 35.0%
! GATTTAGTTCCTAAAAACCC+AGG - Chr5:95910499-95910518 None:intergenic 35.0%
! TGAAAACATCCTGGGTTTTT+AGG + Chr5:95910487-95910506 MsG0580029354.01.T01:intron 35.0%
!! ACTCATAAGGTGTACTGATT+CGG - Chr5:95910848-95910867 None:intergenic 35.0%
!! TATTTGTTTTCTCTGTGGGA+TGG - Chr5:95911460-95911479 None:intergenic 35.0%
AGAATTTGTGCCTGCTTACT+TGG + Chr5:95909256-95909275 MsG0580029354.01.T01:CDS 40.0%
AGTAACATACCATAGAGGTC+AGG - Chr5:95911228-95911247 None:intergenic 40.0%
ATTACTATACCATGCCAGGA+AGG + Chr5:95910893-95910912 MsG0580029354.01.T01:CDS 40.0%
ATTTAAAGACACCGGTGTGA+TGG - Chr5:95910030-95910049 None:intergenic 40.0%
CATTGTTGCAAAGTATGTGG+TGG + Chr5:95911481-95911500 MsG0580029354.01.T01:CDS 40.0%
CGTTTGTTCCCATACTCATA+AGG - Chr5:95910861-95910880 None:intergenic 40.0%
GAGAAACAGAGAAGAAGCAA+AGG - Chr5:95910621-95910640 None:intergenic 40.0%
GAGAATTACTATACCATGCC+AGG + Chr5:95910889-95910908 MsG0580029354.01.T01:CDS 40.0%
GTACATTTCATCCATCACAC+CGG + Chr5:95910016-95910035 MsG0580029354.01.T01:intron 40.0%
GTTCCAGCAATAATCGTGTT+CGG + Chr5:95909074-95909093 MsG0580029354.01.T01:CDS 40.0%
GTTGCAGTAACATACCATAG+AGG - Chr5:95911233-95911252 None:intergenic 40.0%
TCTCCCATTTGAGAATCTTC+CGG - Chr5:95909198-95909217 None:intergenic 40.0%
TGAACACAATATGGGCATAC+GGG - Chr5:95910396-95910415 None:intergenic 40.0%
TGCAGTCTGTGATACCATTA+TGG + Chr5:95910743-95910762 MsG0580029354.01.T01:intron 40.0%
TGCTACTGGAATGTTTGAGA+TGG + Chr5:95911364-95911383 MsG0580029354.01.T01:CDS 40.0%
TTACTATACCATGCCAGGAA+GGG + Chr5:95910894-95910913 MsG0580029354.01.T01:CDS 40.0%
TTCGAAGGTGAAAACATCCT+GGG + Chr5:95910479-95910498 MsG0580029354.01.T01:intron 40.0%
TTTCGAAGGTGAAAACATCC+TGG + Chr5:95910478-95910497 MsG0580029354.01.T01:intron 40.0%
TTTGAACAAGGCAAGTGCAA+AGG + Chr5:95909052-95909071 MsG0580029354.01.T01:CDS 40.0%
! CAGTACCAAACTTTTCTTGC+TGG + Chr5:95910937-95910956 MsG0580029354.01.T01:CDS 40.0%
! GCTACTGGAATGTTTGAGAT+GGG + Chr5:95911365-95911384 MsG0580029354.01.T01:CDS 40.0%
! GGATATGGTCTCTTTTGCTT+TGG - Chr5:95910827-95910846 None:intergenic 40.0%
! TGGAATGAAGTTGTTGTTCC+CGG - Chr5:95909117-95909136 None:intergenic 40.0%
!! AAGGTGTACTGATTCGGATA+TGG - Chr5:95910842-95910861 None:intergenic 40.0%
ACTTCATTCCAACGGTTGCA+CGG + Chr5:95909126-95909145 MsG0580029354.01.T01:CDS 45.0%
CCTTGAAAGTCACGTCCATA+CGG - Chr5:95909164-95909183 None:intergenic 45.0%
CGACCGGAAGATTCTCAAAT+GGG + Chr5:95909192-95909211 MsG0580029354.01.T01:CDS 45.0%
CTAGAAAGATATCCCTGGGA+GGG + Chr5:95911001-95911020 MsG0580029354.01.T01:CDS 45.0%
GAACACAATATGGGCATACG+GGG - Chr5:95910395-95910414 None:intergenic 45.0%
GGAGCTCCCTGATATGAAAT+TGG + Chr5:95911158-95911177 MsG0580029354.01.T01:CDS 45.0%
GGTGCTAGAAAGATATCCCT+GGG + Chr5:95910997-95911016 MsG0580029354.01.T01:CDS 45.0%
TACTTGGGATCCAAGTAAGC+AGG - Chr5:95909269-95909288 None:intergenic 45.0%
TATGGACGTGACTTTCAAGG+CGG + Chr5:95909164-95909183 MsG0580029354.01.T01:CDS 45.0%
TCCAATGGCAAACATCCCAT+GGG - Chr5:95911033-95911052 None:intergenic 45.0%
TCTCCGAACACGATTATTGC+TGG - Chr5:95909080-95909099 None:intergenic 45.0%
! AGTTTTGCTTCTGCTGCTAC+TGG + Chr5:95909317-95909336 MsG0580029354.01.T01:CDS 45.0%
! TGGTGCTAGAAAGATATCCC+TGG + Chr5:95910996-95911015 MsG0580029354.01.T01:CDS 45.0%
!!! GTTTTAAAAATTAAAAAATT+TGG + Chr5:95909790-95909809 MsG0580029354.01.T01:intron 5.0%
!!! TTTTATACAAATTAATTAAA+AGG - Chr5:95910155-95910174 None:intergenic 5.0%
AAATTGCTCCGTGCAACCGT+TGG - Chr5:95909137-95909156 None:intergenic 50.0%
AATGGCAAACATCCCATGGG+TGG - Chr5:95911030-95911049 None:intergenic 50.0%
ACCCATGGGATGTTTGCCAT+TGG + Chr5:95911029-95911048 MsG0580029354.01.T01:CDS 50.0%
AGGGTTTGAATCAGCCTCAG+TGG + Chr5:95911334-95911353 MsG0580029354.01.T01:intron 50.0%
AGTAGCACAACATGCCACTG+AGG - Chr5:95911351-95911370 None:intergenic 50.0%
CCGTATGGACGTGACTTTCA+AGG + Chr5:95909161-95909180 MsG0580029354.01.T01:CDS 50.0%
CTCCAATGGCAAACATCCCA+TGG - Chr5:95911034-95911053 None:intergenic 50.0%
GAGCTCCTGATTGAGCTTAG+TGG - Chr5:95911145-95911164 None:intergenic 50.0%
GCGACCGGAAGATTCTCAAA+TGG + Chr5:95909191-95909210 MsG0580029354.01.T01:CDS 50.0%
GCTAGAAAGATATCCCTGGG+AGG + Chr5:95911000-95911019 MsG0580029354.01.T01:CDS 50.0%
GTGTATTGTGATGCCCTTCC+TGG - Chr5:95910910-95910929 None:intergenic 50.0%
TCAGTGGCATGTTGTGCTAC+TGG + Chr5:95911350-95911369 MsG0580029354.01.T01:CDS 50.0%
TTTCAAGGCGGAAAAGCGAC+CGG + Chr5:95909176-95909195 MsG0580029354.01.T01:CDS 50.0%
! ATGGGTTATGCATGCAGCAG+GGG + Chr5:95911383-95911402 MsG0580029354.01.T01:CDS 50.0%
! CGGAGCAATTTTCAGCCGTA+TGG + Chr5:95909146-95909165 MsG0580029354.01.T01:CDS 50.0%
! GTTGTTGTTCCCGGCATCAA+CGG - Chr5:95909108-95909127 None:intergenic 50.0%
!! AGATGGGTTATGCATGCAGC+AGG + Chr5:95911381-95911400 MsG0580029354.01.T01:CDS 50.0%
!! GATGGGTTATGCATGCAGCA+GGG + Chr5:95911382-95911401 MsG0580029354.01.T01:CDS 50.0%
TTGTGATGCCCTTCCTGGCA+TGG - Chr5:95910905-95910924 None:intergenic 55.0%
CATGGGTGGTAACCCTCCCA+GGG - Chr5:95911016-95911035 None:intergenic 60.0%
CTGGGAGGGTTACCACCCAT+GGG + Chr5:95911015-95911034 MsG0580029354.01.T01:CDS 60.0%
GAGACTCCTCCGTTGATGCC+GGG + Chr5:95909096-95909115 MsG0580029354.01.T01:CDS 60.0%
GGAGACTCCTCCGTTGATGC+CGG + Chr5:95909095-95909114 MsG0580029354.01.T01:CDS 60.0%
GTTGTTCCCGGCATCAACGG+AGG - Chr5:95909105-95909124 None:intergenic 60.0%
CCATGGGTGGTAACCCTCCC+AGG - Chr5:95911017-95911036 None:intergenic 65.0%
CCTGGGAGGGTTACCACCCA+TGG + Chr5:95911014-95911033 MsG0580029354.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 95908987 95911532 95908987 ID=MsG0580029354.01;Name=MsG0580029354.01
Chr5 mRNA 95908987 95911532 95908987 ID=MsG0580029354.01.T01;Parent=MsG0580029354.01;Name=MsG0580029354.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|355
Chr5 exon 95908987 95909367 95908987 ID=MsG0580029354.01.T01:exon:36006;Parent=MsG0580029354.01.T01
Chr5 exon 95910748 95911237 95910748 ID=MsG0580029354.01.T01:exon:36007;Parent=MsG0580029354.01.T01
Chr5 exon 95911336 95911532 95911336 ID=MsG0580029354.01.T01:exon:36008;Parent=MsG0580029354.01.T01
Chr5 CDS 95908987 95909367 95908987 ID=MsG0580029354.01.T01:cds;Parent=MsG0580029354.01.T01
Chr5 CDS 95910748 95911237 95910748 ID=MsG0580029354.01.T01:cds;Parent=MsG0580029354.01.T01
Chr5 CDS 95911336 95911532 95911336 ID=MsG0580029354.01.T01:cds;Parent=MsG0580029354.01.T01
Gene Sequence

>MsG0580029354.01.T01

ATGGAATTTCAATCAAAGCTATTTGCATTATGCTCCTTTCACATTTTGTGCCTCTTTTTGTTTCATTTGAACAAGGCAAGTGCAAAGGTTCCAGCAATAATCGTGTTCGGAGACTCCTCCGTTGATGCCGGGAACAACAACTTCATTCCAACGGTTGCACGGAGCAATTTTCAGCCGTATGGACGTGACTTTCAAGGCGGAAAAGCGACCGGAAGATTCTCAAATGGGAGAATACCAACTGATTTCATAGCAGAATCTTTTGGTATAAAAGAATTTGTGCCTGCTTACTTGGATCCCAAGTATAATATTTCAGATTTTGCAACTGGGGTCAGTTTTGCTTCTGCTGCTACTGGTTATGATAATGCAACTTCAGATGTACTTTCTGTGATACCATTATGGAAGCAATTAGAGTACTACAAGGACTACCAAAAGAATCTAAGTTCATATCTTGGTGAAACCAAAGCAAAAGAGACCATATCCGAATCAGTACACCTTATGAGTATGGGAACAAACGATTTCCTAGAGAATTACTATACCATGCCAGGAAGGGCATCACAATACACACCTCAACAGTACCAAACTTTTCTTGCTGGAATAGCTGAGAATTTCATAAGGAATCTATATGCTCTTGGTGCTAGAAAGATATCCCTGGGAGGGTTACCACCCATGGGATGTTTGCCATTGGAGAGAACTACAAATTTTATGGGTCAGAATGGTTGTGTTGCCAACTTTAATAACATAGCACTTGAGTTCAATGATAAGCTCAAGAATATTACCACTAAGCTCAATCAGGAGCTCCCTGATATGAAATTGGTGTTTTCAAATCCCTATTACATTATGTTGCACATCATAAAAAAACCTGACCTCTATGGGTTTGAATCAGCCTCAGTGGCATGTTGTGCTACTGGAATGTTTGAGATGGGTTATGCATGCAGCAGGGGCAGCATGTTCAGTTGCACAGATGCTTCAAAGTTTGTCTTTTGGGACTCTTTCCATCCCACAGAGAAAACAAATAACATTGTTGCAAAGTATGTGGTGGAGCATGTGTTAGCTCAATTTTTAGAATAA

Protein sequence

>MsG0580029354.01.T01

MEFQSKLFALCSFHILCLFLFHLNKASAKVPAIIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFQGGKATGRFSNGRIPTDFIAESFGIKEFVPAYLDPKYNISDFATGVSFASAATGYDNATSDVLSVIPLWKQLEYYKDYQKNLSSYLGETKAKETISESVHLMSMGTNDFLENYYTMPGRASQYTPQQYQTFLAGIAENFIRNLYALGARKISLGGLPPMGCLPLERTTNFMGQNGCVANFNNIALEFNDKLKNITTKLNQELPDMKLVFSNPYYIMLHIIKKPDLYGFESASVACCATGMFEMGYACSRGSMFSCTDASKFVFWDSFHPTEKTNNIVAKYVVEHVLAQFLE*