Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019466.01.T01 | XP_024640760.1 | 64.013 | 314 | 100 | 4 | 13 | 322 | 1 | 305 | 3.98E-118 | 357 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019466.01.T01 | Q9FZ52 | 32.258 | 217 | 113 | 8 | 9 | 220 | 6 | 193 | 9.44E-20 | 92.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019466.01.T01 | A0A396HZ55 | 64.013 | 314 | 100 | 4 | 13 | 322 | 1 | 305 | 1.90e-118 | 357 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019466.01.T01 | MTR_5g083890 | 64.013 | 314 | 100 | 4 | 13 | 322 | 1 | 305 | 7.34e-121 | 357 |
MsG0480019466.01.T01 | MTR_7g075820 | 56.329 | 316 | 122 | 5 | 13 | 323 | 1 | 305 | 3.97e-102 | 305 |
MsG0480019466.01.T01 | MTR_1g107385 | 53.548 | 310 | 130 | 4 | 16 | 322 | 30 | 328 | 9.33e-94 | 285 |
MsG0480019466.01.T01 | MTR_2g007450 | 44.892 | 323 | 151 | 6 | 18 | 322 | 16 | 329 | 2.40e-78 | 246 |
MsG0480019466.01.T01 | MTR_2g007400 | 44.839 | 310 | 152 | 6 | 18 | 323 | 12 | 306 | 6.03e-72 | 229 |
MsG0480019466.01.T01 | MTR_2g005990 | 44.753 | 324 | 150 | 8 | 13 | 329 | 1 | 302 | 2.14e-68 | 219 |
MsG0480019466.01.T01 | MTR_3g099830 | 40.836 | 311 | 137 | 5 | 18 | 325 | 12 | 278 | 7.33e-65 | 209 |
MsG0480019466.01.T01 | MTR_2g007500 | 42.415 | 323 | 140 | 8 | 10 | 322 | 6 | 292 | 1.66e-64 | 207 |
MsG0480019466.01.T01 | MTR_4g098590 | 40.717 | 307 | 164 | 5 | 20 | 323 | 1 | 292 | 1.65e-61 | 201 |
MsG0480019466.01.T01 | MTR_2g008320 | 39.117 | 317 | 164 | 7 | 11 | 322 | 45 | 337 | 2.20e-61 | 202 |
MsG0480019466.01.T01 | MTR_2g008310 | 40.777 | 309 | 152 | 5 | 18 | 322 | 2 | 283 | 3.62e-61 | 200 |
MsG0480019466.01.T01 | MTR_3g107100 | 40.705 | 312 | 157 | 8 | 18 | 325 | 11 | 298 | 4.57e-60 | 198 |
MsG0480019466.01.T01 | MTR_2g007360 | 41.562 | 320 | 113 | 9 | 18 | 323 | 12 | 271 | 4.50e-59 | 194 |
MsG0480019466.01.T01 | MTR_1g053025 | 39.937 | 318 | 158 | 9 | 18 | 322 | 2 | 299 | 5.82e-59 | 194 |
MsG0480019466.01.T01 | MTR_3g107160 | 39.677 | 310 | 160 | 10 | 17 | 322 | 9 | 295 | 1.37e-52 | 178 |
MsG0480019466.01.T01 | MTR_3g026920 | 39.385 | 325 | 152 | 8 | 18 | 321 | 19 | 319 | 4.38e-51 | 174 |
MsG0480019466.01.T01 | MTR_3g107120 | 37.615 | 327 | 162 | 9 | 10 | 320 | 1 | 301 | 2.99e-49 | 169 |
MsG0480019466.01.T01 | MTR_7g007340 | 35.577 | 312 | 138 | 7 | 18 | 325 | 13 | 265 | 3.55e-43 | 152 |
MsG0480019466.01.T01 | MTR_7g083740 | 35.873 | 315 | 151 | 7 | 9 | 322 | 8 | 272 | 5.04e-42 | 150 |
MsG0480019466.01.T01 | MTR_1g041245 | 33.127 | 323 | 173 | 9 | 15 | 327 | 8 | 297 | 2.35e-38 | 140 |
MsG0480019466.01.T01 | MTR_7g007080 | 34.295 | 312 | 175 | 10 | 17 | 323 | 3 | 289 | 2.70e-38 | 140 |
MsG0480019466.01.T01 | MTR_7g075800 | 32.727 | 330 | 187 | 10 | 15 | 324 | 6 | 320 | 4.33e-36 | 138 |
MsG0480019466.01.T01 | MTR_7g007370 | 42.775 | 173 | 82 | 4 | 154 | 322 | 92 | 251 | 2.54e-30 | 118 |
MsG0480019466.01.T01 | MTR_7g056433 | 33.333 | 318 | 171 | 11 | 16 | 322 | 10 | 297 | 6.18e-30 | 117 |
MsG0480019466.01.T01 | MTR_7g032380 | 31.707 | 328 | 149 | 11 | 15 | 330 | 8 | 272 | 2.05e-29 | 115 |
MsG0480019466.01.T01 | MTR_2g007530 | 42.391 | 184 | 79 | 4 | 18 | 181 | 19 | 195 | 6.08e-29 | 114 |
MsG0480019466.01.T01 | MTR_1089s0010 | 31.290 | 310 | 166 | 8 | 18 | 316 | 8 | 281 | 5.92e-28 | 112 |
MsG0480019466.01.T01 | MTR_3g107140 | 37.968 | 187 | 86 | 5 | 48 | 225 | 22 | 187 | 1.58e-27 | 107 |
MsG0480019466.01.T01 | MTR_7g115270 | 31.034 | 319 | 192 | 10 | 15 | 322 | 9 | 310 | 2.94e-27 | 110 |
MsG0480019466.01.T01 | MTR_5g058100 | 31.746 | 315 | 172 | 12 | 14 | 316 | 5 | 288 | 1.08e-26 | 108 |
MsG0480019466.01.T01 | MTR_5g073420 | 32.372 | 312 | 162 | 12 | 18 | 318 | 11 | 284 | 1.24e-26 | 108 |
MsG0480019466.01.T01 | MTR_6g040270 | 30.921 | 304 | 173 | 8 | 20 | 316 | 10 | 283 | 2.31e-26 | 107 |
MsG0480019466.01.T01 | MTR_6g011460 | 32.468 | 308 | 168 | 11 | 18 | 316 | 46 | 322 | 2.85e-26 | 108 |
MsG0480019466.01.T01 | MTR_3g108150 | 30.556 | 324 | 174 | 11 | 15 | 324 | 10 | 296 | 5.19e-25 | 104 |
MsG0480019466.01.T01 | MTR_7g026500 | 31.975 | 319 | 174 | 13 | 15 | 318 | 11 | 301 | 8.66e-25 | 103 |
MsG0480019466.01.T01 | MTR_5g045170 | 29.912 | 341 | 167 | 14 | 13 | 322 | 1 | 300 | 3.80e-24 | 102 |
MsG0480019466.01.T01 | MTR_1g085120 | 30.503 | 318 | 184 | 9 | 18 | 324 | 179 | 470 | 4.49e-24 | 102 |
MsG0480019466.01.T01 | MTR_7g056447 | 35.238 | 210 | 110 | 6 | 10 | 218 | 1 | 185 | 6.92e-24 | 99.8 |
MsG0480019466.01.T01 | MTR_5g007410 | 29.102 | 323 | 184 | 11 | 20 | 326 | 28 | 321 | 8.57e-24 | 101 |
MsG0480019466.01.T01 | MTR_3g105060 | 27.244 | 312 | 194 | 6 | 8 | 317 | 4 | 284 | 9.91e-24 | 100 |
MsG0480019466.01.T01 | MTR_6g029350 | 45.082 | 122 | 56 | 3 | 209 | 328 | 1 | 113 | 1.70e-23 | 97.4 |
MsG0480019466.01.T01 | MTR_1g085120 | 30.380 | 316 | 183 | 9 | 18 | 322 | 92 | 381 | 2.18e-23 | 100 |
MsG0480019466.01.T01 | MTR_8g085430 | 35.714 | 224 | 109 | 8 | 13 | 226 | 6 | 204 | 2.44e-23 | 99.0 |
MsG0480019466.01.T01 | MTR_1g085120 | 30.380 | 316 | 183 | 9 | 18 | 322 | 167 | 456 | 3.62e-23 | 100 |
MsG0480019466.01.T01 | MTR_4g039440 | 31.068 | 309 | 174 | 12 | 18 | 316 | 34 | 313 | 4.04e-23 | 99.4 |
MsG0480019466.01.T01 | MTR_7g032370 | 29.450 | 309 | 162 | 11 | 33 | 330 | 5 | 268 | 4.39e-23 | 98.6 |
MsG0480019466.01.T01 | MTR_3g036250 | 30.530 | 321 | 161 | 12 | 18 | 323 | 5 | 278 | 6.06e-23 | 98.2 |
MsG0480019466.01.T01 | MTR_7g055943 | 30.351 | 313 | 175 | 10 | 16 | 316 | 38 | 319 | 8.41e-23 | 98.6 |
MsG0480019466.01.T01 | MTR_7g098570 | 31.776 | 321 | 156 | 12 | 18 | 318 | 20 | 297 | 1.13e-22 | 98.6 |
MsG0480019466.01.T01 | MTR_5g073340 | 30.435 | 322 | 160 | 11 | 12 | 322 | 2 | 270 | 2.52e-22 | 95.5 |
MsG0480019466.01.T01 | MTR_1g108820 | 27.640 | 322 | 195 | 6 | 14 | 323 | 4 | 299 | 3.72e-22 | 95.9 |
MsG0480019466.01.T01 | MTR_5g045510 | 29.795 | 292 | 158 | 12 | 18 | 298 | 12 | 267 | 4.81e-22 | 95.9 |
MsG0480019466.01.T01 | MTR_7g034115 | 34.969 | 326 | 164 | 13 | 15 | 328 | 8 | 297 | 8.10e-22 | 95.1 |
MsG0480019466.01.T01 | MTR_3g040700 | 28.931 | 318 | 176 | 11 | 18 | 326 | 43 | 319 | 1.16e-21 | 95.5 |
MsG0480019466.01.T01 | MTR_1g108820 | 27.329 | 322 | 196 | 6 | 14 | 323 | 4 | 299 | 1.26e-21 | 94.7 |
MsG0480019466.01.T01 | MTR_7g088260 | 31.366 | 322 | 163 | 13 | 14 | 318 | 87 | 367 | 1.34e-21 | 95.5 |
MsG0480019466.01.T01 | MTR_7g098510 | 30.864 | 324 | 159 | 14 | 18 | 320 | 18 | 297 | 1.44e-21 | 94.7 |
MsG0480019466.01.T01 | MTR_2g007550 | 29.882 | 338 | 116 | 13 | 11 | 322 | 7 | 249 | 5.70e-21 | 92.4 |
MsG0480019466.01.T01 | MTR_7g056287 | 29.795 | 292 | 165 | 12 | 18 | 304 | 3 | 259 | 9.28e-21 | 92.0 |
MsG0480019466.01.T01 | MTR_5g073370 | 28.846 | 312 | 183 | 10 | 18 | 320 | 5 | 286 | 1.08e-20 | 92.0 |
MsG0480019466.01.T01 | MTR_3g095600 | 31.061 | 264 | 122 | 9 | 18 | 275 | 4 | 213 | 1.51e-20 | 90.5 |
MsG0480019466.01.T01 | MTR_3g467400 | 30.453 | 243 | 156 | 6 | 18 | 260 | 3 | 232 | 2.21e-20 | 90.9 |
MsG0480019466.01.T01 | MTR_6g045333 | 29.091 | 330 | 182 | 14 | 11 | 320 | 54 | 351 | 2.26e-20 | 91.7 |
MsG0480019466.01.T01 | MTR_2g036470 | 28.963 | 328 | 188 | 11 | 11 | 323 | 7 | 304 | 2.71e-20 | 91.3 |
MsG0480019466.01.T01 | MTR_7g033915 | 30.435 | 322 | 158 | 15 | 15 | 323 | 8 | 276 | 4.11e-20 | 90.1 |
MsG0480019466.01.T01 | MTR_7g056277 | 29.795 | 292 | 165 | 12 | 18 | 304 | 259 | 515 | 5.58e-20 | 91.3 |
MsG0480019466.01.T01 | MTR_7g060470 | 27.778 | 324 | 180 | 11 | 18 | 317 | 3 | 296 | 7.94e-20 | 89.7 |
MsG0480019466.01.T01 | MTR_5g058000 | 31.392 | 309 | 165 | 13 | 18 | 316 | 8 | 279 | 1.17e-19 | 89.0 |
MsG0480019466.01.T01 | MTR_6g022360 | 30.097 | 309 | 165 | 10 | 18 | 316 | 43 | 310 | 3.82e-19 | 87.8 |
MsG0480019466.01.T01 | MTR_3g110010 | 28.030 | 396 | 177 | 13 | 17 | 325 | 12 | 386 | 4.88e-19 | 88.6 |
MsG0480019466.01.T01 | MTR_7g098480 | 31.310 | 313 | 166 | 12 | 18 | 318 | 18 | 293 | 5.28e-19 | 87.8 |
MsG0480019466.01.T01 | MTR_7g034110 | 32.063 | 315 | 147 | 10 | 15 | 326 | 8 | 258 | 7.00e-19 | 86.7 |
MsG0480019466.01.T01 | MTR_1g066830 | 28.981 | 314 | 178 | 9 | 18 | 316 | 8 | 291 | 7.62e-19 | 86.7 |
MsG0480019466.01.T01 | MTR_8g445780 | 28.339 | 307 | 183 | 10 | 14 | 318 | 9 | 280 | 9.70e-19 | 86.7 |
MsG0480019466.01.T01 | MTR_3g109982 | 28.021 | 389 | 172 | 13 | 17 | 318 | 12 | 379 | 1.02e-18 | 87.4 |
MsG0480019466.01.T01 | MTR_7g056430 | 27.795 | 331 | 160 | 8 | 10 | 322 | 1 | 270 | 1.86e-18 | 87.0 |
MsG0480019466.01.T01 | MTR_7g056420 | 27.795 | 331 | 160 | 8 | 10 | 322 | 1 | 270 | 2.23e-18 | 86.7 |
MsG0480019466.01.T01 | MTR_0009s0080 | 27.160 | 324 | 189 | 11 | 16 | 322 | 15 | 308 | 3.87e-18 | 85.1 |
MsG0480019466.01.T01 | MTR_3g108560 | 27.964 | 329 | 176 | 14 | 12 | 323 | 14 | 298 | 6.91e-18 | 83.2 |
MsG0480019466.01.T01 | MTR_7g056280 | 31.557 | 244 | 141 | 9 | 13 | 250 | 1 | 224 | 8.93e-18 | 84.3 |
MsG0480019466.01.T01 | MTR_5g008950 | 29.154 | 319 | 173 | 12 | 20 | 325 | 1 | 279 | 1.36e-17 | 83.2 |
MsG0480019466.01.T01 | MTR_3g108560 | 27.844 | 334 | 180 | 14 | 12 | 328 | 14 | 303 | 1.61e-17 | 82.8 |
MsG0480019466.01.T01 | MTR_7g033990 | 30.599 | 317 | 176 | 13 | 18 | 323 | 11 | 294 | 1.88e-17 | 83.2 |
MsG0480019466.01.T01 | MTR_6g022500 | 28.981 | 314 | 182 | 10 | 18 | 320 | 101 | 384 | 3.36e-17 | 82.4 |
MsG0480019466.01.T01 | MTR_3g071850 | 28.228 | 333 | 181 | 12 | 11 | 320 | 17 | 314 | 1.29e-16 | 81.3 |
MsG0480019466.01.T01 | MTR_1g108800 | 27.597 | 308 | 150 | 11 | 14 | 313 | 4 | 246 | 1.48e-16 | 79.7 |
MsG0480019466.01.T01 | MTR_5g082930 | 48.276 | 87 | 40 | 1 | 20 | 101 | 17 | 103 | 4.42e-16 | 76.3 |
MsG0480019466.01.T01 | MTR_6g044572 | 29.137 | 278 | 168 | 8 | 18 | 279 | 2 | 266 | 1.52e-15 | 77.4 |
MsG0480019466.01.T01 | MTR_2g007090 | 36.601 | 153 | 75 | 5 | 171 | 322 | 74 | 205 | 1.92e-15 | 75.9 |
MsG0480019466.01.T01 | MTR_6g044560 | 29.137 | 278 | 168 | 8 | 18 | 279 | 178 | 442 | 3.01e-15 | 77.0 |
MsG0480019466.01.T01 | MTR_7g033945 | 37.297 | 185 | 92 | 8 | 15 | 196 | 8 | 171 | 3.28e-15 | 73.2 |
MsG0480019466.01.T01 | MTR_0492s0020 | 29.796 | 245 | 129 | 7 | 15 | 256 | 83 | 287 | 1.79e-14 | 74.3 |
MsG0480019466.01.T01 | MTR_7g033470 | 42.063 | 126 | 54 | 6 | 11 | 131 | 6 | 117 | 2.03e-14 | 70.1 |
MsG0480019466.01.T01 | MTR_6g013160 | 26.536 | 358 | 213 | 13 | 13 | 324 | 1 | 354 | 2.14e-14 | 73.9 |
MsG0480019466.01.T01 | MTR_0543s0010 | 29.796 | 245 | 129 | 7 | 15 | 256 | 83 | 287 | 2.53e-14 | 73.9 |
MsG0480019466.01.T01 | MTR_5g087940 | 34.375 | 192 | 94 | 7 | 16 | 206 | 24 | 184 | 2.90e-14 | 73.6 |
MsG0480019466.01.T01 | MTR_3g023630 | 29.630 | 216 | 126 | 6 | 13 | 226 | 3 | 194 | 5.47e-14 | 72.4 |
MsG0480019466.01.T01 | MTR_5g080710 | 25.272 | 368 | 176 | 13 | 18 | 323 | 33 | 363 | 9.08e-14 | 72.0 |
MsG0480019466.01.T01 | MTR_4g032730 | 30.189 | 212 | 123 | 6 | 18 | 221 | 15 | 209 | 1.07e-13 | 72.0 |
MsG0480019466.01.T01 | MTR_8g014260 | 34.597 | 211 | 113 | 7 | 17 | 218 | 15 | 209 | 1.16e-13 | 72.0 |
MsG0480019466.01.T01 | MTR_3g082890 | 32.243 | 214 | 107 | 6 | 2 | 201 | 68 | 257 | 1.65e-13 | 71.6 |
MsG0480019466.01.T01 | MTR_2g007460 | 37.398 | 123 | 50 | 4 | 16 | 133 | 10 | 110 | 2.59e-13 | 65.9 |
MsG0480019466.01.T01 | MTR_8g465380 | 30.102 | 196 | 109 | 6 | 18 | 206 | 12 | 186 | 3.72e-13 | 70.1 |
MsG0480019466.01.T01 | MTR_5g084070 | 28.090 | 356 | 175 | 14 | 18 | 323 | 13 | 337 | 3.90e-13 | 70.1 |
MsG0480019466.01.T01 | MTR_8g465650 | 29.082 | 196 | 112 | 6 | 18 | 206 | 12 | 187 | 6.04e-13 | 69.3 |
MsG0480019466.01.T01 | MTR_3g082890 | 30.769 | 208 | 119 | 5 | 18 | 224 | 17 | 200 | 6.42e-13 | 69.7 |
MsG0480019466.01.T01 | MTR_4g050940 | 27.426 | 237 | 126 | 8 | 1 | 217 | 50 | 260 | 1.64e-12 | 68.6 |
MsG0480019466.01.T01 | MTR_2g008300 | 50.000 | 60 | 30 | 0 | 166 | 225 | 4 | 63 | 3.28e-12 | 61.6 |
MsG0480019466.01.T01 | MTR_1g013630 | 28.221 | 326 | 182 | 15 | 18 | 323 | 39 | 332 | 3.47e-12 | 67.0 |
MsG0480019466.01.T01 | MTR_2g082800 | 30.622 | 209 | 115 | 6 | 16 | 220 | 25 | 207 | 3.98e-12 | 67.0 |
MsG0480019466.01.T01 | MTR_7g021990 | 25.672 | 335 | 213 | 8 | 17 | 323 | 4 | 330 | 4.38e-12 | 67.0 |
MsG0480019466.01.T01 | MTR_4g134150 | 28.837 | 215 | 111 | 9 | 15 | 223 | 11 | 189 | 5.91e-12 | 65.1 |
MsG0480019466.01.T01 | MTR_7g021950 | 25.672 | 335 | 213 | 8 | 17 | 323 | 4 | 330 | 1.04e-11 | 65.9 |
MsG0480019466.01.T01 | MTR_2g082880 | 31.088 | 193 | 114 | 7 | 11 | 192 | 3 | 187 | 1.12e-11 | 65.9 |
MsG0480019466.01.T01 | MTR_7g022105 | 26.113 | 337 | 210 | 11 | 13 | 318 | 1 | 329 | 1.54e-11 | 65.5 |
MsG0480019466.01.T01 | MTR_1g038710 | 32.394 | 213 | 110 | 11 | 18 | 220 | 19 | 207 | 1.82e-11 | 65.1 |
MsG0480019466.01.T01 | MTR_3g023440 | 30.000 | 210 | 113 | 10 | 17 | 221 | 2 | 182 | 1.90e-11 | 65.1 |
MsG0480019466.01.T01 | MTR_7g034120 | 29.858 | 211 | 122 | 8 | 128 | 326 | 30 | 226 | 3.73e-11 | 63.5 |
MsG0480019466.01.T01 | MTR_7g034090 | 35.503 | 169 | 78 | 6 | 16 | 177 | 2 | 146 | 4.05e-11 | 63.9 |
MsG0480019466.01.T01 | MTR_7g056417 | 44.286 | 70 | 37 | 1 | 156 | 225 | 7 | 74 | 5.20e-11 | 60.8 |
MsG0480019466.01.T01 | MTR_8g468840 | 29.717 | 212 | 126 | 6 | 17 | 221 | 13 | 208 | 6.97e-11 | 63.5 |
MsG0480019466.01.T01 | MTR_3g014550 | 31.282 | 195 | 100 | 7 | 16 | 204 | 9 | 175 | 7.17e-11 | 63.2 |
MsG0480019466.01.T01 | MTR_8g062270 | 26.977 | 215 | 127 | 5 | 18 | 221 | 16 | 211 | 7.21e-11 | 63.2 |
MsG0480019466.01.T01 | MTR_4g045900 | 25.767 | 326 | 155 | 12 | 15 | 292 | 23 | 309 | 7.55e-11 | 63.5 |
MsG0480019466.01.T01 | MTR_3g036320 | 31.771 | 192 | 98 | 8 | 17 | 200 | 19 | 185 | 8.54e-11 | 62.8 |
MsG0480019466.01.T01 | MTR_1g492880 | 42.222 | 90 | 50 | 2 | 13 | 101 | 1 | 89 | 9.12e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019466.01.T01 | AT1G16930 | 32.258 | 217 | 113 | 8 | 9 | 220 | 6 | 193 | 9.63e-21 | 92.8 |
MsG0480019466.01.T01 | AT1G16930 | 32.258 | 217 | 113 | 8 | 9 | 220 | 6 | 193 | 9.63e-21 | 92.8 |
MsG0480019466.01.T01 | AT1G16930 | 32.258 | 217 | 113 | 8 | 9 | 220 | 6 | 193 | 9.63e-21 | 92.8 |
MsG0480019466.01.T01 | AT1G51370 | 31.863 | 204 | 109 | 5 | 17 | 220 | 18 | 191 | 2.08e-17 | 82.4 |
MsG0480019466.01.T01 | AT1G51370 | 31.863 | 204 | 109 | 5 | 17 | 220 | 18 | 191 | 2.96e-17 | 82.4 |
MsG0480019466.01.T01 | AT1G51370 | 31.863 | 204 | 109 | 5 | 17 | 220 | 18 | 191 | 3.58e-17 | 82.4 |
MsG0480019466.01.T01 | AT4G14103 | 25.195 | 385 | 189 | 15 | 13 | 326 | 3 | 359 | 1.01e-16 | 80.9 |
MsG0480019466.01.T01 | AT1G78750 | 32.212 | 208 | 116 | 7 | 18 | 220 | 18 | 205 | 1.17e-16 | 80.9 |
MsG0480019466.01.T01 | AT1G78750 | 32.212 | 208 | 116 | 7 | 18 | 220 | 18 | 205 | 1.17e-16 | 80.9 |
MsG0480019466.01.T01 | AT4G14103 | 29.412 | 221 | 122 | 8 | 13 | 225 | 3 | 197 | 2.77e-16 | 79.3 |
MsG0480019466.01.T01 | AT4G14103 | 29.412 | 221 | 122 | 8 | 13 | 225 | 3 | 197 | 2.77e-16 | 79.3 |
MsG0480019466.01.T01 | AT4G13985 | 29.108 | 213 | 127 | 7 | 18 | 225 | 19 | 212 | 4.14e-16 | 79.3 |
MsG0480019466.01.T01 | AT1G55660 | 31.579 | 209 | 113 | 7 | 18 | 220 | 53 | 237 | 4.73e-16 | 78.6 |
MsG0480019466.01.T01 | AT1G55660 | 31.579 | 209 | 113 | 7 | 18 | 220 | 53 | 237 | 6.53e-16 | 79.0 |
MsG0480019466.01.T01 | AT4G00160 | 29.864 | 221 | 129 | 6 | 16 | 236 | 14 | 208 | 6.71e-16 | 78.6 |
MsG0480019466.01.T01 | AT5G53635 | 29.084 | 251 | 132 | 8 | 20 | 263 | 2 | 213 | 7.39e-16 | 78.6 |
MsG0480019466.01.T01 | AT4G00315 | 31.250 | 208 | 115 | 7 | 18 | 220 | 2 | 186 | 8.62e-16 | 78.2 |
MsG0480019466.01.T01 | AT5G56810 | 30.244 | 205 | 121 | 5 | 16 | 220 | 13 | 195 | 1.32e-15 | 76.6 |
MsG0480019466.01.T01 | AT5G56810 | 30.244 | 205 | 121 | 5 | 16 | 220 | 13 | 195 | 2.43e-15 | 77.0 |
MsG0480019466.01.T01 | AT1G60400 | 27.157 | 313 | 178 | 12 | 9 | 313 | 5 | 275 | 2.99e-15 | 76.6 |
MsG0480019466.01.T01 | AT4G13965 | 30.542 | 203 | 115 | 6 | 18 | 220 | 10 | 186 | 3.48e-15 | 76.3 |
MsG0480019466.01.T01 | AT2G26860 | 30.542 | 203 | 123 | 5 | 18 | 220 | 2 | 186 | 7.51e-15 | 75.1 |
MsG0480019466.01.T01 | AT2G26860 | 30.542 | 203 | 123 | 5 | 18 | 220 | 2 | 186 | 7.51e-15 | 75.1 |
MsG0480019466.01.T01 | AT5G53840 | 29.577 | 213 | 117 | 6 | 11 | 220 | 11 | 193 | 9.21e-15 | 75.1 |
MsG0480019466.01.T01 | AT1G13780 | 29.358 | 218 | 124 | 8 | 11 | 219 | 3 | 199 | 1.67e-14 | 74.3 |
MsG0480019466.01.T01 | AT1G13780 | 29.358 | 218 | 124 | 8 | 11 | 219 | 3 | 199 | 1.91e-14 | 73.6 |
MsG0480019466.01.T01 | AT1G80470 | 26.601 | 203 | 127 | 4 | 18 | 220 | 15 | 195 | 2.15e-14 | 73.9 |
MsG0480019466.01.T01 | AT4G26350 | 27.885 | 208 | 119 | 7 | 18 | 221 | 2 | 182 | 4.21e-14 | 73.2 |
MsG0480019466.01.T01 | AT1G66290 | 29.469 | 207 | 110 | 7 | 18 | 220 | 29 | 203 | 5.66e-14 | 72.8 |
MsG0480019466.01.T01 | AT3G49480 | 28.910 | 211 | 126 | 6 | 17 | 221 | 11 | 203 | 8.80e-14 | 72.4 |
MsG0480019466.01.T01 | AT1G32375 | 29.665 | 209 | 115 | 7 | 18 | 220 | 2 | 184 | 9.93e-14 | 72.0 |
MsG0480019466.01.T01 | AT1G32375 | 29.665 | 209 | 115 | 7 | 18 | 220 | 2 | 184 | 9.93e-14 | 72.0 |
MsG0480019466.01.T01 | AT3G62430 | 30.806 | 211 | 112 | 8 | 18 | 220 | 2 | 186 | 1.55e-13 | 71.6 |
MsG0480019466.01.T01 | AT3G59160 | 28.139 | 231 | 120 | 7 | 16 | 220 | 11 | 221 | 1.84e-13 | 71.2 |
MsG0480019466.01.T01 | AT3G59230 | 32.444 | 225 | 113 | 10 | 17 | 226 | 11 | 211 | 1.86e-13 | 71.2 |
MsG0480019466.01.T01 | AT2G26030 | 27.941 | 204 | 122 | 5 | 18 | 220 | 4 | 183 | 1.98e-13 | 71.2 |
MsG0480019466.01.T01 | AT5G56380 | 29.187 | 209 | 120 | 5 | 18 | 220 | 2 | 188 | 2.00e-13 | 71.2 |
MsG0480019466.01.T01 | AT5G56380 | 29.187 | 209 | 120 | 5 | 18 | 220 | 2 | 188 | 2.00e-13 | 71.2 |
MsG0480019466.01.T01 | AT2G26030 | 27.941 | 204 | 122 | 5 | 18 | 220 | 4 | 183 | 2.09e-13 | 71.2 |
MsG0480019466.01.T01 | AT2G26030 | 27.941 | 204 | 122 | 5 | 18 | 220 | 4 | 183 | 2.09e-13 | 71.2 |
MsG0480019466.01.T01 | AT5G56440 | 31.373 | 204 | 116 | 7 | 18 | 220 | 2 | 182 | 4.50e-13 | 70.1 |
MsG0480019466.01.T01 | AT1G69630 | 30.846 | 201 | 117 | 5 | 18 | 218 | 18 | 196 | 4.90e-13 | 70.1 |
MsG0480019466.01.T01 | AT3G59170 | 29.310 | 232 | 118 | 9 | 16 | 220 | 5 | 217 | 7.31e-13 | 69.7 |
MsG0480019466.01.T01 | AT3G59240 | 29.493 | 217 | 121 | 7 | 17 | 225 | 7 | 199 | 2.21e-12 | 68.2 |
MsG0480019466.01.T01 | AT5G38390 | 32.569 | 218 | 107 | 9 | 18 | 226 | 2 | 188 | 2.68e-12 | 67.8 |
MsG0480019466.01.T01 | AT5G22660 | 29.048 | 210 | 111 | 7 | 17 | 220 | 12 | 189 | 3.12e-12 | 67.4 |
MsG0480019466.01.T01 | AT5G22660 | 28.216 | 241 | 127 | 9 | 17 | 248 | 12 | 215 | 3.50e-12 | 66.6 |
MsG0480019466.01.T01 | AT4G26340 | 29.902 | 204 | 118 | 7 | 18 | 220 | 2 | 181 | 3.68e-12 | 67.4 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 38 | 219 | 4.21e-12 | 67.0 |
MsG0480019466.01.T01 | AT5G18780 | 26.429 | 280 | 169 | 11 | 14 | 287 | 7 | 255 | 4.94e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G18780 | 26.429 | 280 | 169 | 11 | 14 | 287 | 7 | 255 | 4.94e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 38 | 219 | 5.78e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 1 | 182 | 5.95e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 1 | 182 | 5.95e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 1 | 182 | 5.95e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G22700 | 30.516 | 213 | 112 | 8 | 13 | 220 | 1 | 182 | 5.95e-12 | 66.6 |
MsG0480019466.01.T01 | AT3G58940 | 29.907 | 214 | 119 | 7 | 18 | 219 | 2 | 196 | 6.08e-12 | 67.0 |
MsG0480019466.01.T01 | AT3G58940 | 29.907 | 214 | 119 | 7 | 18 | 219 | 2 | 196 | 6.08e-12 | 67.0 |
MsG0480019466.01.T01 | AT3G56780 | 25.329 | 304 | 176 | 8 | 20 | 322 | 9 | 262 | 6.15e-12 | 66.6 |
MsG0480019466.01.T01 | AT3G56780 | 25.329 | 304 | 176 | 8 | 20 | 322 | 9 | 262 | 6.99e-12 | 66.2 |
MsG0480019466.01.T01 | AT4G14096 | 27.982 | 218 | 127 | 6 | 13 | 225 | 3 | 195 | 7.06e-12 | 66.6 |
MsG0480019466.01.T01 | AT4G14096 | 27.982 | 218 | 127 | 6 | 13 | 225 | 3 | 195 | 7.06e-12 | 66.6 |
MsG0480019466.01.T01 | AT5G18780 | 26.429 | 280 | 169 | 11 | 14 | 287 | 7 | 255 | 7.14e-12 | 66.2 |
MsG0480019466.01.T01 | AT5G18780 | 26.429 | 280 | 169 | 11 | 14 | 287 | 7 | 255 | 7.14e-12 | 66.2 |
MsG0480019466.01.T01 | AT1G60410 | 28.112 | 249 | 150 | 8 | 16 | 264 | 8 | 227 | 7.18e-12 | 66.2 |
MsG0480019466.01.T01 | AT3G56780 | 25.329 | 304 | 176 | 8 | 20 | 322 | 9 | 262 | 7.49e-12 | 66.6 |
MsG0480019466.01.T01 | AT2G42720 | 31.604 | 212 | 121 | 8 | 18 | 224 | 2 | 194 | 1.70e-11 | 65.5 |
MsG0480019466.01.T01 | AT5G22670 | 29.583 | 240 | 133 | 9 | 16 | 254 | 9 | 213 | 2.04e-11 | 65.1 |
MsG0480019466.01.T01 | AT5G41630 | 30.876 | 217 | 121 | 8 | 14 | 220 | 8 | 205 | 2.07e-11 | 65.1 |
MsG0480019466.01.T01 | AT1G48400 | 29.817 | 218 | 116 | 7 | 17 | 224 | 9 | 199 | 2.32e-11 | 65.1 |
MsG0480019466.01.T01 | AT1G48400 | 29.817 | 218 | 116 | 7 | 17 | 224 | 9 | 199 | 2.66e-11 | 64.7 |
MsG0480019466.01.T01 | AT3G03040 | 26.239 | 343 | 187 | 14 | 18 | 323 | 2 | 315 | 2.80e-11 | 64.7 |
MsG0480019466.01.T01 | AT3G58920 | 30.455 | 220 | 119 | 8 | 18 | 225 | 2 | 199 | 2.81e-11 | 64.7 |
MsG0480019466.01.T01 | AT3G58860 | 32.227 | 211 | 111 | 9 | 18 | 220 | 7 | 193 | 8.62e-11 | 63.2 |
Find 65 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATATGGTATTGGGCAATT+TGG | 0.119988 | 4:-20723140 | None:intergenic |
CTTAGTTGGTTCAATGTAAA+AGG | 0.182915 | 4:+20723190 | MsG0480019466.01.T01:CDS |
AATATGGTATTGGGCAATTT+GGG | 0.240928 | 4:-20723139 | None:intergenic |
TGCTGGATGTCCTGTTCTTC+AGG | 0.257301 | 4:+20723312 | MsG0480019466.01.T01:CDS |
TGACTTCCCCGACATCAAAT+TGG | 0.283026 | 4:+20722859 | MsG0480019466.01.T01:CDS |
TCGAGGATGCAGAAAACTTT+TGG | 0.313912 | 4:+20723281 | MsG0480019466.01.T01:CDS |
GATGAGGAGGAGGAGGAAAC+AGG | 0.317945 | 4:+20723373 | MsG0480019466.01.T01:CDS |
CTTGGTGATCGACTATTATA+AGG | 0.325342 | 4:+20723662 | MsG0480019466.01.T01:CDS |
TCAAAATCTTGAGCTCTATC+AGG | 0.328529 | 4:+20723722 | MsG0480019466.01.T01:CDS |
CTGGAATTCTATCAAGTAGA+TGG | 0.333404 | 4:+20722807 | MsG0480019466.01.T01:CDS |
TTACAACTAAATATGGTATT+GGG | 0.335205 | 4:-20723148 | None:intergenic |
TTTACAACTAAATATGGTAT+TGG | 0.336283 | 4:-20723149 | None:intergenic |
AGTTTCTAAGAATACAACTA+TGG | 0.358386 | 4:+20723494 | MsG0480019466.01.T01:CDS |
TCCTGTTCTTCAGGATTTCA+AGG | 0.371645 | 4:+20723321 | MsG0480019466.01.T01:CDS |
GTTAACGGTTGTAATGAGAT+TGG | 0.379501 | 4:-20723017 | None:intergenic |
CAAGTAGATGGGTTAAATTA+TGG | 0.383654 | 4:+20722819 | MsG0480019466.01.T01:CDS |
CTCACATCTTTCTACCAAAC+AGG | 0.388658 | 4:+20722775 | MsG0480019466.01.T01:CDS |
TGATCGTCCAATTTGATGTC+GGG | 0.391881 | 4:-20722866 | None:intergenic |
TCCAGTCGTAACAGCCTGTT+TGG | 0.393881 | 4:-20722789 | None:intergenic |
ACGCGATGTATTACCATTCC+AGG | 0.412667 | 4:+20723345 | MsG0480019466.01.T01:CDS |
ACGCTTCATTTGTATTGCAT+TGG | 0.430555 | 4:+20723256 | MsG0480019466.01.T01:CDS |
TAGAAAGATGTGAGAGAATG+AGG | 0.435461 | 4:-20722766 | None:intergenic |
CTTCAATAATTTGACTCACT+TGG | 0.436579 | 4:+20723644 | MsG0480019466.01.T01:CDS |
GCCTTGAAATCCTGAAGAAC+AGG | 0.438045 | 4:-20723322 | None:intergenic |
TAGTGGTTCTAAACCTTAGT+TGG | 0.443452 | 4:+20723176 | MsG0480019466.01.T01:CDS |
AGTAGACAAACTGATTGAAT+AGG | 0.444191 | 4:-20722901 | None:intergenic |
GGTTTGAACAAGTTGGTTAA+CGG | 0.444367 | 4:-20723032 | None:intergenic |
ATGAGGTAGATGACTTCATC+TGG | 0.464294 | 4:-20722749 | None:intergenic |
TTTGTATTGCATTGGATTCG+AGG | 0.471876 | 4:+20723264 | MsG0480019466.01.T01:CDS |
TTAACGGTTGTAATGAGATT+GGG | 0.480384 | 4:-20723016 | None:intergenic |
CAAGTGAGTCAAATTATTGA+AGG | 0.485855 | 4:-20723643 | None:intergenic |
TAACTTTGGTTTGAACAAGT+TGG | 0.491337 | 4:-20723039 | None:intergenic |
ACCAAACAGGCTGTTACGAC+TGG | 0.493306 | 4:+20722788 | MsG0480019466.01.T01:CDS |
AAGATGGAGAAACTTAACTT+TGG | 0.500555 | 4:-20723053 | None:intergenic |
AAACTGATTGAATAGGAGAA+TGG | 0.518696 | 4:-20722894 | None:intergenic |
TTGCTTATTCTATCCTTCGA+TGG | 0.521215 | 4:-20722722 | None:intergenic |
GACAGTTTCTACCTGGACAT+TGG | 0.523676 | 4:+20722956 | MsG0480019466.01.T01:CDS |
CTGATAGAGAGAATATATGA+TGG | 0.526004 | 4:-20722691 | None:intergenic |
CATCAGTATGAAGAAGAAGA+TGG | 0.529423 | 4:-20723069 | None:intergenic |
TTGATCGTCCAATTTGATGT+CGG | 0.533517 | 4:-20722867 | None:intergenic |
TTGAAGGTAGGAAAATCATA+AGG | 0.533767 | 4:-20723627 | None:intergenic |
ATATGGTATTGGGCAATTTG+GGG | 0.537090 | 4:-20723138 | None:intergenic |
GATGTTGATAATGATGATTA+TGG | 0.537325 | 4:+20723088 | MsG0480019466.01.T01:CDS |
CGCGATGTATTACCATTCCA+GGG | 0.548225 | 4:+20723346 | MsG0480019466.01.T01:CDS |
TGTTGGCATATCCAATGTCC+AGG | 0.550105 | 4:-20722967 | None:intergenic |
TTCCATCGACAGTTTCTACC+TGG | 0.555119 | 4:+20722949 | MsG0480019466.01.T01:CDS |
ATCAGCAATGGCACCATCGA+AGG | 0.561948 | 4:+20722709 | MsG0480019466.01.T01:CDS |
AGAGTCGACATGATTAATGT+TGG | 0.572331 | 4:-20722984 | None:intergenic |
TGGAATTCTATCAAGTAGAT+GGG | 0.574912 | 4:+20722808 | MsG0480019466.01.T01:CDS |
TATGGTATTGGGCAATTTGG+GGG | 0.579324 | 4:-20723137 | None:intergenic |
TATATTCTCTCTATCAGCAA+TGG | 0.585767 | 4:+20722697 | MsG0480019466.01.T01:CDS |
ACTAAGGTTTAGAACCACTA+GGG | 0.587447 | 4:-20723173 | None:intergenic |
GTTTCTAAGAATACAACTAT+GGG | 0.590219 | 4:+20723495 | MsG0480019466.01.T01:CDS |
TGAGTCAAATTATTGAAGGT+AGG | 0.602882 | 4:-20723639 | None:intergenic |
TCTAAGAATACAACTATGGG+AGG | 0.626202 | 4:+20723498 | MsG0480019466.01.T01:CDS |
ATGTCGGGGAAGTCAAGAAG+AGG | 0.637672 | 4:-20722851 | None:intergenic |
ATATGATGGAGTGAGTTCAA+AGG | 0.640847 | 4:-20722677 | None:intergenic |
TACTCTGTTATGCTCTCGCG+AGG | 0.643476 | 4:+20722920 | MsG0480019466.01.T01:CDS |
AACTAAGGTTTAGAACCACT+AGG | 0.652810 | 4:-20723174 | None:intergenic |
ATTTAGTTGTAAAACCCTAG+TGG | 0.654056 | 4:+20723159 | MsG0480019466.01.T01:CDS |
CGGTTGTAATGAGATTGGGA+AGG | 0.662361 | 4:-20723012 | None:intergenic |
GATCGTCCAATTTGATGTCG+GGG | 0.668729 | 4:-20722865 | None:intergenic |
GTCCAGGTAGAAACTGTCGA+TGG | 0.669227 | 4:-20722951 | None:intergenic |
GCGATGTATTACCATTCCAG+GGG | 0.707500 | 4:+20723347 | MsG0480019466.01.T01:CDS |
CGATGTATTACCATTCCAGG+GGG | 0.733020 | 4:+20723348 | MsG0480019466.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAAAAAGTGACTTCAT+AGG | - | Chr4:20723472-20723491 | None:intergenic | 20.0% |
!! | TTACAACTAAATATGGTATT+GGG | - | Chr4:20723151-20723170 | None:intergenic | 20.0% |
!! | TTTACAACTAAATATGGTAT+TGG | - | Chr4:20723152-20723171 | None:intergenic | 20.0% |
! | GAGTATACATCTAAATTATG+TGG | - | Chr4:20723608-20723627 | None:intergenic | 25.0% |
!! | AGTTTCTAAGAATACAACTA+TGG | + | Chr4:20723494-20723513 | MsG0480019466.01.T01:CDS | 25.0% |
!! | GTTTCTAAGAATACAACTAT+GGG | + | Chr4:20723495-20723514 | MsG0480019466.01.T01:CDS | 25.0% |
!! | TAGGGTTTTACAACTAAATA+TGG | - | Chr4:20723158-20723177 | None:intergenic | 25.0% |
!!! | GATGTTGATAATGATGATTA+TGG | + | Chr4:20723088-20723107 | MsG0480019466.01.T01:CDS | 25.0% |
AAACTGATTGAATAGGAGAA+TGG | - | Chr4:20722897-20722916 | None:intergenic | 30.0% | |
AAGATGGAGAAACTTAACTT+TGG | - | Chr4:20723056-20723075 | None:intergenic | 30.0% | |
AGTAGACAAACTGATTGAAT+AGG | - | Chr4:20722904-20722923 | None:intergenic | 30.0% | |
ATTTAGTTGTAAAACCCTAG+TGG | + | Chr4:20723159-20723178 | MsG0480019466.01.T01:CDS | 30.0% | |
CAAGTGAGTCAAATTATTGA+AGG | - | Chr4:20723646-20723665 | None:intergenic | 30.0% | |
CTGATAGAGAGAATATATGA+TGG | - | Chr4:20722694-20722713 | None:intergenic | 30.0% | |
CTTCAATAATTTGACTCACT+TGG | + | Chr4:20723644-20723663 | MsG0480019466.01.T01:CDS | 30.0% | |
TATATTCTCTCTATCAGCAA+TGG | + | Chr4:20722697-20722716 | MsG0480019466.01.T01:CDS | 30.0% | |
TGAGTCAAATTATTGAAGGT+AGG | - | Chr4:20723642-20723661 | None:intergenic | 30.0% | |
TGGAATTCTATCAAGTAGAT+GGG | + | Chr4:20722808-20722827 | MsG0480019466.01.T01:CDS | 30.0% | |
TTAACGGTTGTAATGAGATT+GGG | - | Chr4:20723019-20723038 | None:intergenic | 30.0% | |
TTGAAGGTAGGAAAATCATA+AGG | - | Chr4:20723630-20723649 | None:intergenic | 30.0% | |
! | AAATATGGTATTGGGCAATT+TGG | - | Chr4:20723143-20723162 | None:intergenic | 30.0% |
! | AATATGGTATTGGGCAATTT+GGG | - | Chr4:20723142-20723161 | None:intergenic | 30.0% |
! | CTTAGTTGGTTCAATGTAAA+AGG | + | Chr4:20723190-20723209 | MsG0480019466.01.T01:CDS | 30.0% |
! | CTTTTACATTGAACCAACTA+AGG | - | Chr4:20723192-20723211 | None:intergenic | 30.0% |
!! | CAAGTAGATGGGTTAAATTA+TGG | + | Chr4:20722819-20722838 | MsG0480019466.01.T01:CDS | 30.0% |
!! | TAACTTTGGTTTGAACAAGT+TGG | - | Chr4:20723042-20723061 | None:intergenic | 30.0% |
ACGCTTCATTTGTATTGCAT+TGG | + | Chr4:20723256-20723275 | MsG0480019466.01.T01:CDS | 35.0% | |
AGAGTCGACATGATTAATGT+TGG | - | Chr4:20722987-20723006 | None:intergenic | 35.0% | |
CATCAGTATGAAGAAGAAGA+TGG | - | Chr4:20723072-20723091 | None:intergenic | 35.0% | |
CTGGAATTCTATCAAGTAGA+TGG | + | Chr4:20722807-20722826 | MsG0480019466.01.T01:CDS | 35.0% | |
GTTAACGGTTGTAATGAGAT+TGG | - | Chr4:20723020-20723039 | None:intergenic | 35.0% | |
TAGAAAGATGTGAGAGAATG+AGG | - | Chr4:20722769-20722788 | None:intergenic | 35.0% | |
TCAAAATCTTGAGCTCTATC+AGG | + | Chr4:20723722-20723741 | MsG0480019466.01.T01:CDS | 35.0% | |
TCTAAGAATACAACTATGGG+AGG | + | Chr4:20723498-20723517 | MsG0480019466.01.T01:CDS | 35.0% | |
TTGATCGTCCAATTTGATGT+CGG | - | Chr4:20722870-20722889 | None:intergenic | 35.0% | |
TTGCTTATTCTATCCTTCGA+TGG | - | Chr4:20722725-20722744 | None:intergenic | 35.0% | |
TTTGTATTGCATTGGATTCG+AGG | + | Chr4:20723264-20723283 | MsG0480019466.01.T01:CDS | 35.0% | |
! | AACTAAGGTTTAGAACCACT+AGG | - | Chr4:20723177-20723196 | None:intergenic | 35.0% |
! | ACTAAGGTTTAGAACCACTA+GGG | - | Chr4:20723176-20723195 | None:intergenic | 35.0% |
! | ATATGGTATTGGGCAATTTG+GGG | - | Chr4:20723141-20723160 | None:intergenic | 35.0% |
! | CTTGGTGATCGACTATTATA+AGG | + | Chr4:20723662-20723681 | MsG0480019466.01.T01:CDS | 35.0% |
! | GGCTTTTCTTTTTCTTCTGT+TGG | + | Chr4:20723211-20723230 | MsG0480019466.01.T01:CDS | 35.0% |
!! | AAATGAAGCGTTTTGAGTGA+GGG | - | Chr4:20723247-20723266 | None:intergenic | 35.0% |
!! | AGCTCAAGATTTTGAAGATC+AGG | - | Chr4:20723717-20723736 | None:intergenic | 35.0% |
!! | GCTCAAGATTTTGAAGATCA+GGG | - | Chr4:20723716-20723735 | None:intergenic | 35.0% |
!! | GGTTTGAACAAGTTGGTTAA+CGG | - | Chr4:20723035-20723054 | None:intergenic | 35.0% |
!! | TAGTGGTTCTAAACCTTAGT+TGG | + | Chr4:20723176-20723195 | MsG0480019466.01.T01:CDS | 35.0% |
ATGAGGTAGATGACTTCATC+TGG | - | Chr4:20722752-20722771 | None:intergenic | 40.0% | |
CTCACATCTTTCTACCAAAC+AGG | + | Chr4:20722775-20722794 | MsG0480019466.01.T01:CDS | 40.0% | |
TCCTGTTCTTCAGGATTTCA+AGG | + | Chr4:20723321-20723340 | MsG0480019466.01.T01:CDS | 40.0% | |
TGATCGTCCAATTTGATGTC+GGG | - | Chr4:20722869-20722888 | None:intergenic | 40.0% | |
! | TATGGTATTGGGCAATTTGG+GGG | - | Chr4:20723140-20723159 | None:intergenic | 40.0% |
! | TCGAGGATGCAGAAAACTTT+TGG | + | Chr4:20723281-20723300 | MsG0480019466.01.T01:CDS | 40.0% |
!! | AACTTTTGGTTGCTTGTTGC+TGG | + | Chr4:20723295-20723314 | MsG0480019466.01.T01:CDS | 40.0% |
!! | CAAATGAAGCGTTTTGAGTG+AGG | - | Chr4:20723248-20723267 | None:intergenic | 40.0% |
ACGCGATGTATTACCATTCC+AGG | + | Chr4:20723345-20723364 | MsG0480019466.01.T01:CDS | 45.0% | |
CGATGTATTACCATTCCAGG+GGG | + | Chr4:20723348-20723367 | MsG0480019466.01.T01:CDS | 45.0% | |
CGCGATGTATTACCATTCCA+GGG | + | Chr4:20723346-20723365 | MsG0480019466.01.T01:CDS | 45.0% | |
CGGTTGTAATGAGATTGGGA+AGG | - | Chr4:20723015-20723034 | None:intergenic | 45.0% | |
GACAGTTTCTACCTGGACAT+TGG | + | Chr4:20722956-20722975 | MsG0480019466.01.T01:CDS | 45.0% | |
GATCGTCCAATTTGATGTCG+GGG | - | Chr4:20722868-20722887 | None:intergenic | 45.0% | |
GCCTTGAAATCCTGAAGAAC+AGG | - | Chr4:20723325-20723344 | None:intergenic | 45.0% | |
GCGATGTATTACCATTCCAG+GGG | + | Chr4:20723347-20723366 | MsG0480019466.01.T01:CDS | 45.0% | |
TGACTTCCCCGACATCAAAT+TGG | + | Chr4:20722859-20722878 | MsG0480019466.01.T01:CDS | 45.0% | |
TGTTGGCATATCCAATGTCC+AGG | - | Chr4:20722970-20722989 | None:intergenic | 45.0% | |
TTCCATCGACAGTTTCTACC+TGG | + | Chr4:20722949-20722968 | MsG0480019466.01.T01:CDS | 45.0% | |
!! | GATTTTGAAGATCAGGGCAG+TGG | - | Chr4:20723710-20723729 | None:intergenic | 45.0% |
ACCAAACAGGCTGTTACGAC+TGG | + | Chr4:20722788-20722807 | MsG0480019466.01.T01:CDS | 50.0% | |
ATCAGCAATGGCACCATCGA+AGG | + | Chr4:20722709-20722728 | MsG0480019466.01.T01:CDS | 50.0% | |
ATGTCGGGGAAGTCAAGAAG+AGG | - | Chr4:20722854-20722873 | None:intergenic | 50.0% | |
GTCCAGGTAGAAACTGTCGA+TGG | - | Chr4:20722954-20722973 | None:intergenic | 50.0% | |
TACTCTGTTATGCTCTCGCG+AGG | + | Chr4:20722920-20722939 | MsG0480019466.01.T01:CDS | 50.0% | |
TATTGGGCAATTTGGGGGCT+CGG | - | Chr4:20723135-20723154 | None:intergenic | 50.0% | |
TCCAGTCGTAACAGCCTGTT+TGG | - | Chr4:20722792-20722811 | None:intergenic | 50.0% | |
TGCTGGATGTCCTGTTCTTC+AGG | + | Chr4:20723312-20723331 | MsG0480019466.01.T01:CDS | 50.0% | |
TGTATTACCATTCCAGGGGG+AGG | + | Chr4:20723351-20723370 | MsG0480019466.01.T01:CDS | 50.0% | |
GATGAGGAGGAGGAGGAAAC+AGG | + | Chr4:20723373-20723392 | MsG0480019466.01.T01:CDS | 55.0% | |
ACCATTCCAGGGGGAGGATG+AGG | + | Chr4:20723357-20723376 | MsG0480019466.01.T01:CDS | 60.0% | |
ATTCCAGGGGGAGGATGAGG+AGG | + | Chr4:20723360-20723379 | MsG0480019466.01.T01:CDS | 60.0% | |
TCCTCATCCTCCCCCTGGAA+TGG | - | Chr4:20723361-20723380 | None:intergenic | 60.0% | |
CCAGGGGGAGGATGAGGAGG+AGG | + | Chr4:20723363-20723382 | MsG0480019466.01.T01:CDS | 70.0% | |
CCTCCTCCTCATCCTCCCCC+TGG | - | Chr4:20723366-20723385 | None:intergenic | 70.0% | |
GGGGGAGGATGAGGAGGAGG+AGG | + | Chr4:20723366-20723385 | MsG0480019466.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 20722680 | 20723770 | 20722680 | ID=MsG0480019466.01;Name=MsG0480019466.01 |
Chr4 | mRNA | 20722680 | 20723770 | 20722680 | ID=MsG0480019466.01.T01;Parent=MsG0480019466.01;Name=MsG0480019466.01.T01;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|2|0|330 |
Chr4 | exon | 20722680 | 20723519 | 20722680 | ID=MsG0480019466.01.T01:exon:10031;Parent=MsG0480019466.01.T01 |
Chr4 | exon | 20723618 | 20723770 | 20723618 | ID=MsG0480019466.01.T01:exon:10032;Parent=MsG0480019466.01.T01 |
Chr4 | CDS | 20722680 | 20723519 | 20722680 | ID=MsG0480019466.01.T01:cds;Parent=MsG0480019466.01.T01 |
Chr4 | CDS | 20723618 | 20723770 | 20723618 | ID=MsG0480019466.01.T01:cds;Parent=MsG0480019466.01.T01 |
Gene Sequence |
Protein sequence |