AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024322.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024322.01.T01 MTR_5g008950 50.653 383 125 5 12 335 1 378 3.31e-114 336
MsG0580024322.01.T01 MTR_5g008920 50.526 380 125 8 6 325 8 384 7.66e-111 328
MsG0580024322.01.T01 MTR_7g032380 37.429 350 174 10 12 322 13 356 2.93e-67 215
MsG0580024322.01.T01 MTR_7g115270 35.233 386 172 8 12 319 14 399 1.21e-66 215
MsG0580024322.01.T01 MTR_8g085430 39.755 327 169 9 1 310 1 316 8.85e-63 203
MsG0580024322.01.T01 MTR_1g041245 34.400 375 181 10 12 322 13 386 4.20e-61 200
MsG0580024322.01.T01 MTR_7g032370 37.255 357 162 10 22 322 2 352 5.16e-60 196
MsG0580024322.01.T01 MTR_7g034115 38.043 368 158 10 12 314 13 375 1.59e-59 196
MsG0580024322.01.T01 MTR_3g467400 37.260 365 173 9 12 322 5 367 7.92e-59 194
MsG0580024322.01.T01 MTR_7g056433 33.777 376 184 9 12 322 14 389 1.50e-56 188
MsG0580024322.01.T01 MTR_3g105060 34.254 362 183 9 12 322 16 373 6.29e-52 176
MsG0580024322.01.T01 MTR_3g036250 34.795 365 183 9 7 319 2 363 1.28e-49 169
MsG0580024322.01.T01 MTR_7g033915 32.609 368 174 10 12 321 13 364 4.44e-49 168
MsG0580024322.01.T01 MTR_0543s0010 33.424 368 181 7 12 321 88 449 1.71e-48 169
MsG0580024322.01.T01 MTR_0543s0010 65.957 47 16 0 12 58 14 60 1.38e-11 65.5
MsG0580024322.01.T01 MTR_7g033990 32.703 370 175 11 12 314 13 375 1.89e-47 165
MsG0580024322.01.T01 MTR_7g098510 32.637 383 183 10 8 322 16 391 1.82e-45 159
MsG0580024322.01.T01 MTR_3g023630 32.861 353 174 11 12 305 10 358 3.78e-45 158
MsG0580024322.01.T01 MTR_7g098570 31.099 373 186 9 12 318 22 389 1.64e-44 159
MsG0580024322.01.T01 MTR_7g088260 32.447 376 183 9 12 322 93 462 5.82e-44 157
MsG0580024322.01.T01 MTR_3g040700 33.435 329 165 7 8 284 41 367 9.11e-44 156
MsG0580024322.01.T01 MTR_0492s0020 32.584 356 176 7 12 309 88 437 1.19e-43 155
MsG0580024322.01.T01 MTR_0492s0020 65.957 47 16 0 12 58 14 60 1.29e-11 65.5
MsG0580024322.01.T01 MTR_7g007080 31.959 388 189 13 12 330 6 387 1.56e-42 152
MsG0580024322.01.T01 MTR_7g056447 44.886 176 92 3 12 183 11 185 3.83e-42 148
MsG0580024322.01.T01 MTR_7g114710 34.375 352 188 11 12 322 15 364 3.23e-41 147
MsG0580024322.01.T01 MTR_5g073420 29.032 372 197 7 12 321 13 379 5.03e-41 147
MsG0580024322.01.T01 MTR_5g039490 31.579 361 191 11 11 321 21 375 2.57e-40 145
MsG0580024322.01.T01 MTR_1089s0010 30.390 385 199 10 4 324 2 381 4.37e-40 145
MsG0580024322.01.T01 MTR_1g108820 31.714 350 168 8 12 294 10 355 8.81e-40 144
MsG0580024322.01.T01 MTR_7g098480 31.383 376 193 11 8 321 16 388 1.30e-39 145
MsG0580024322.01.T01 MTR_6g040270 31.496 381 190 12 5 319 3 378 1.43e-39 144
MsG0580024322.01.T01 MTR_7g034110 33.550 307 168 9 12 291 13 310 6.34e-38 138
MsG0580024322.01.T01 MTR_5g012840 32.075 318 188 10 28 322 6 318 9.56e-38 137
MsG0580024322.01.T01 MTR_6g022500 29.708 377 196 9 12 322 103 476 1.05e-37 140
MsG0580024322.01.T01 MTR_7g056430 29.477 363 184 11 12 316 11 359 1.78e-37 143
MsG0580024322.01.T01 MTR_7g056420 29.477 363 184 11 12 316 11 359 1.83e-37 142
MsG0580024322.01.T01 MTR_5g058100 29.894 378 198 8 12 324 11 386 2.79e-37 137
MsG0580024322.01.T01 MTR_7g026500 28.158 380 202 9 12 321 16 394 2.58e-35 132
MsG0580024322.01.T01 MTR_1g085120 28.571 385 198 8 12 324 94 473 3.30e-35 134
MsG0580024322.01.T01 MTR_1g085120 28.571 385 198 8 12 324 169 548 5.52e-35 134
MsG0580024322.01.T01 MTR_7g056277 31.926 379 191 14 5 321 254 627 6.07e-35 134
MsG0580024322.01.T01 MTR_7g056287 31.452 372 188 15 12 321 5 371 1.22e-33 127
MsG0580024322.01.T01 MTR_1g108820 35.317 252 140 5 12 249 10 252 1.35e-32 124
MsG0580024322.01.T01 MTR_5g058000 29.539 369 197 8 12 321 10 374 2.81e-32 124
MsG0580024322.01.T01 MTR_3g087260 39.056 233 116 9 12 241 14 223 3.14e-32 125
MsG0580024322.01.T01 MTR_3g087260 31.502 273 129 4 107 321 184 456 1.30e-26 109
MsG0580024322.01.T01 MTR_3g108150 40.187 214 118 5 12 220 15 223 5.92e-32 123
MsG0580024322.01.T01 MTR_3g108150 40.476 84 48 1 240 321 303 386 1.67e-11 65.1
MsG0580024322.01.T01 MTR_3g109982 41.848 184 102 3 7 187 10 191 1.60e-31 125
MsG0580024322.01.T01 MTR_3g110010 41.848 184 102 3 7 187 10 191 2.58e-31 124
MsG0580024322.01.T01 MTR_1g066830 35.931 231 132 6 12 230 10 236 5.59e-31 120
MsG0580024322.01.T01 MTR_5g045510 31.044 364 189 13 11 319 13 369 8.40e-31 120
MsG0580024322.01.T01 MTR_7g034120 32.907 313 127 12 79 322 10 308 9.49e-31 118
MsG0580024322.01.T01 MTR_3g107160 26.667 390 215 9 1 324 1 385 1.09e-30 120
MsG0580024322.01.T01 MTR_1g108800 29.945 364 165 10 12 319 10 339 1.78e-30 118
MsG0580024322.01.T01 MTR_2g036470 29.008 393 201 13 3 321 7 395 3.15e-30 119
MsG0580024322.01.T01 MTR_3g108560 31.481 378 180 15 12 321 22 388 4.54e-30 118
MsG0580024322.01.T01 MTR_3g108560 37.963 216 109 5 12 215 22 224 7.24e-30 116
MsG0580024322.01.T01 MTR_4g134150 33.040 227 136 6 12 234 16 230 9.57e-30 114
MsG0580024322.01.T01 MTR_8g077460 31.332 383 194 16 1 322 1 375 5.84e-29 115
MsG0580024322.01.T01 MTR_7g060470 29.189 370 171 12 12 298 5 366 9.43e-29 114
MsG0580024322.01.T01 MTR_7g075820 26.817 399 204 14 1 319 1 391 1.89e-28 114
MsG0580024322.01.T01 MTR_7g033945 39.752 161 86 3 12 162 13 172 2.18e-28 108
MsG0580024322.01.T01 MTR_7g055943 30.130 385 194 12 12 324 42 423 4.07e-28 113
MsG0580024322.01.T01 MTR_3g107120 25.765 392 211 9 3 319 2 388 6.85e-28 112
MsG0580024322.01.T01 MTR_5g008910 62.921 89 30 3 239 326 220 306 1.68e-27 109
MsG0580024322.01.T01 MTR_5g008910 43.478 138 43 4 94 229 32 136 2.13e-20 90.1
MsG0580024322.01.T01 MTR_5g039450 28.534 382 173 11 8 319 4 355 4.16e-27 109
MsG0580024322.01.T01 MTR_5g083890 28.571 392 167 15 12 305 8 384 9.61e-27 110
MsG0580024322.01.T01 MTR_6g011460 35.000 240 143 6 1 230 37 273 2.50e-26 108
MsG0580024322.01.T01 MTR_7g083740 28.232 379 172 12 12 321 19 366 3.42e-26 107
MsG0580024322.01.T01 MTR_5g013500 27.273 352 166 9 45 322 30 365 7.25e-26 106
MsG0580024322.01.T01 MTR_5g007410 34.043 235 134 8 11 230 27 255 7.72e-26 107
MsG0580024322.01.T01 MTR_3g082890 29.114 316 185 10 7 296 94 396 7.94e-26 107
MsG0580024322.01.T01 MTR_3g082890 54.321 81 32 2 244 322 407 484 2.42e-19 89.0
MsG0580024322.01.T01 MTR_3g082890 29.003 331 193 11 7 311 14 328 1.10e-25 107
MsG0580024322.01.T01 MTR_3g082890 54.321 81 32 2 244 322 364 441 2.43e-19 89.0
MsG0580024322.01.T01 MTR_2g007400 27.628 409 194 15 3 319 2 400 3.10e-25 105
MsG0580024322.01.T01 MTR_2g007550 29.070 344 181 13 12 319 16 332 3.97e-25 103
MsG0580024322.01.T01 MTR_2g005990 28.571 399 180 14 12 319 8 392 7.16e-25 103
MsG0580024322.01.T01 MTR_6g044572 26.684 386 207 10 12 322 4 388 7.53e-25 103
MsG0580024322.01.T01 MTR_1g085120 33.051 236 136 5 12 230 181 411 9.89e-25 104
MsG0580024322.01.T01 MTR_3g095600 31.153 321 166 14 12 312 6 291 2.01e-24 101
MsG0580024322.01.T01 MTR_4g039440 34.199 231 136 5 12 230 36 262 2.20e-24 103
MsG0580024322.01.T01 MTR_6g044560 26.010 396 217 10 2 322 170 564 2.39e-24 103
MsG0580024322.01.T01 MTR_7g033940 46.847 111 56 1 5 112 89 199 3.19e-24 99.0
MsG0580024322.01.T01 MTR_1g107385 29.340 409 183 16 1 319 28 420 3.34e-24 102
MsG0580024322.01.T01 MTR_7g021990 27.676 383 202 13 12 322 50 429 4.23e-24 102
MsG0580024322.01.T01 MTR_5g065100 28.012 332 172 11 8 292 6 317 5.25e-24 102
MsG0580024322.01.T01 MTR_7g021950 27.676 383 202 13 12 322 50 429 1.22e-23 101
MsG0580024322.01.T01 MTR_2g008310 26.478 389 187 12 12 322 4 371 4.05e-23 99.4
MsG0580024322.01.T01 MTR_5g045170 27.920 351 184 10 9 293 13 360 4.38e-23 99.4
MsG0580024322.01.T01 MTR_2g007450 33.735 249 125 9 1 215 7 249 5.42e-23 99.4
MsG0580024322.01.T01 MTR_5g063950 25.648 347 174 9 9 293 7 331 7.27e-23 98.2
MsG0580024322.01.T01 MTR_5g031970 28.916 332 174 12 8 295 14 327 7.61e-23 97.8
MsG0580024322.01.T01 MTR_7g081290 53.012 83 36 1 240 322 177 256 7.92e-23 95.9
MsG0580024322.01.T01 MTR_7g081290 66.667 45 15 0 14 58 22 66 5.53e-14 71.2
MsG0580024322.01.T01 MTR_7g022105 26.064 376 210 8 12 322 51 423 1.28e-22 98.2
MsG0580024322.01.T01 MTR_6g022360 28.232 379 187 12 12 321 45 407 1.79e-22 97.4
MsG0580024322.01.T01 MTR_5g073370 27.557 352 178 10 12 294 7 350 2.01e-22 97.1
MsG0580024322.01.T01 MTR_2g020180 47.826 92 43 2 233 322 127 215 2.75e-22 93.6
MsG0580024322.01.T01 MTR_1g043170 49.451 91 41 2 234 322 1 88 3.92e-22 89.4
MsG0580024322.01.T01 MTR_7g007340 28.274 336 164 10 12 291 15 329 6.64e-22 95.5
MsG0580024322.01.T01 MTR_8g062080 36.316 190 102 8 9 183 22 207 7.25e-22 96.3
MsG0580024322.01.T01 MTR_3g071850 26.975 367 183 10 3 291 17 376 9.68e-22 96.7
MsG0580024322.01.T01 MTR_2g007500 32.547 212 126 6 12 215 16 218 1.57e-21 94.0
MsG0580024322.01.T01 MTR_4g098590 25.789 380 189 11 12 306 1 372 2.67e-21 94.0
MsG0580024322.01.T01 MTR_3g107100 30.126 239 153 6 12 237 13 250 3.40e-21 94.0
MsG0580024322.01.T01 MTR_3g099830 27.020 396 187 14 1 319 1 371 3.79e-21 93.2
MsG0580024322.01.T01 MTR_8g062010 36.126 191 107 5 5 183 4 191 4.84e-21 93.6
MsG0580024322.01.T01 MTR_5g039470 28.214 280 179 9 26 291 1 272 6.97e-21 92.0
MsG0580024322.01.T01 MTR_7g022060 27.794 349 205 12 1 322 1 329 2.25e-20 90.5
MsG0580024322.01.T01 MTR_6g045333 32.231 242 141 9 7 230 55 291 4.20e-20 90.9
MsG0580024322.01.T01 MTR_2g008320 25.455 385 202 12 12 322 54 427 6.10e-20 90.5
MsG0580024322.01.T01 MTR_5g061680 33.871 186 110 5 12 187 13 195 9.65e-20 88.6
MsG0580024322.01.T01 MTR_5g073340 32.609 230 128 6 12 236 10 217 1.21e-19 88.2
MsG0580024322.01.T01 MTR_7g021930 27.794 349 205 12 1 322 1 329 1.63e-19 88.2
MsG0580024322.01.T01 MTR_7g021970 27.794 349 205 12 1 322 1 329 1.63e-19 88.2
MsG0580024322.01.T01 MTR_0009s0080 32.627 236 141 8 8 230 16 246 2.48e-19 88.6
MsG0580024322.01.T01 MTR_8g467790 34.896 192 99 8 12 183 150 335 5.99e-19 87.8
MsG0580024322.01.T01 MTR_8g469020 33.498 203 107 7 9 183 6 208 1.23e-18 86.7
MsG0580024322.01.T01 MTR_8g062310 33.511 188 112 7 12 190 27 210 1.28e-18 86.7
MsG0580024322.01.T01 MTR_7g056020 32.906 234 127 7 6 230 12 224 1.38e-18 87.0
MsG0580024322.01.T01 MTR_5g061410 33.516 182 100 5 9 188 4 166 2.92e-18 83.6
MsG0580024322.01.T01 MTR_8g058965 32.618 233 124 10 1 200 1 233 5.06e-18 85.1
MsG0580024322.01.T01 MTR_3g114200 36.567 134 79 4 12 140 21 153 8.65e-18 79.7
MsG0580024322.01.T01 MTR_3g113770 32.727 165 92 6 128 282 180 335 8.87e-18 83.2
MsG0580024322.01.T01 MTR_2g099980 34.437 151 86 4 13 155 41 186 1.08e-17 84.0
MsG0580024322.01.T01 MTR_4g050250 33.036 224 116 11 9 198 20 243 1.35e-17 83.6
MsG0580024322.01.T01 MTR_2g007530 28.125 352 171 11 12 319 21 334 1.59e-17 82.4
MsG0580024322.01.T01 MTR_7g034090 26.667 345 185 13 12 324 6 314 2.02e-17 83.2
MsG0580024322.01.T01 MTR_8g070950 32.524 206 108 10 12 196 17 212 2.69e-17 82.8
MsG0580024322.01.T01 MTR_7g056417 36.496 137 73 4 124 246 7 143 6.21e-17 77.4
MsG0580024322.01.T01 MTR_4g080773 33.163 196 107 6 12 185 21 214 3.22e-16 79.7
MsG0580024322.01.T01 MTR_3g115430 50.000 86 38 2 239 322 43 125 3.59e-16 74.3
MsG0580024322.01.T01 MTR_8g445780 29.707 239 142 10 1 218 1 234 4.14e-16 79.0
MsG0580024322.01.T01 MTR_4g080773 33.163 196 107 6 12 185 21 214 4.32e-16 79.3
MsG0580024322.01.T01 MTR_2g083840 34.234 222 114 11 5 200 16 231 5.68e-16 79.0
MsG0580024322.01.T01 MTR_4g096730 43.333 90 48 2 233 322 3 89 8.29e-16 72.4
MsG0580024322.01.T01 MTR_1g067190 33.094 139 91 2 2 139 7 144 1.26e-15 77.0
MsG0580024322.01.T01 MTR_1g095750 50.000 66 33 0 12 77 48 113 1.91e-15 72.8
MsG0580024322.01.T01 MTR_1g053025 26.500 400 185 16 12 319 4 386 1.94e-15 77.0
MsG0580024322.01.T01 MTR_8g014160 32.673 202 115 8 2 183 33 233 2.30e-15 77.0
MsG0580024322.01.T01 MTR_7g098590 43.000 100 52 2 8 102 16 115 4.75e-15 71.6
MsG0580024322.01.T01 MTR_7g021630 36.047 172 89 7 4 166 11 170 5.69e-15 75.5
MsG0580024322.01.T01 MTR_5g021550 34.839 155 81 6 1 137 10 162 6.40e-15 72.0
MsG0580024322.01.T01 MTR_7g021630 36.047 172 89 7 4 166 11 170 6.61e-15 75.1
MsG0580024322.01.T01 MTR_2g007360 33.613 238 110 10 12 230 14 222 8.61e-15 75.1
MsG0580024322.01.T01 MTR_8g468810 35.915 142 77 5 12 139 27 168 9.96e-15 75.1
MsG0580024322.01.T01 MTR_3g108140 45.783 83 43 1 241 321 65 147 1.27e-14 71.6
MsG0580024322.01.T01 MTR_3g113782 64.444 45 16 0 12 56 19 63 1.40e-14 68.9
MsG0580024322.01.T01 MTR_5g060570 35.878 131 79 4 12 139 19 147 1.49e-14 72.8
MsG0580024322.01.T01 MTR_3g023270 30.000 170 111 4 4 169 6 171 1.79e-14 73.9
MsG0580024322.01.T01 MTR_4g050930 30.675 163 104 3 12 166 31 192 1.81e-14 74.3
MsG0580024322.01.T01 MTR_5g082930 47.126 87 40 2 12 95 17 100 2.00e-14 71.6
MsG0580024322.01.T01 MTR_5g084070 34.066 182 117 3 6 186 9 188 2.42e-14 73.9
MsG0580024322.01.T01 MTR_5g084070 46.667 60 32 0 233 292 336 395 2.73e-13 70.9
MsG0580024322.01.T01 MTR_4g050930 30.723 166 106 3 12 169 31 195 2.42e-14 73.6
MsG0580024322.01.T01 MTR_4g080787 31.122 196 111 6 12 185 21 214 2.51e-14 73.9
MsG0580024322.01.T01 MTR_5g087940 31.658 199 99 7 4 179 20 204 2.67e-14 73.6
MsG0580024322.01.T01 MTR_2g047858 32.973 185 112 5 12 185 117 300 2.80e-14 73.9
MsG0580024322.01.T01 MTR_8g017280 33.582 134 82 3 15 141 41 174 3.22e-14 72.4
MsG0580024322.01.T01 MTR_8g017280 33.582 134 82 3 15 141 41 174 4.26e-14 73.2
MsG0580024322.01.T01 MTR_8g014260 32.558 215 120 9 7 201 13 222 6.27e-14 72.8
MsG0580024322.01.T01 MTR_8g058970 29.381 194 102 7 3 162 12 204 6.54e-14 72.8
MsG0580024322.01.T01 MTR_2g020170 45.783 83 39 3 12 88 24 106 7.79e-14 68.2
MsG0580024322.01.T01 MTR_3g005980 29.545 176 107 5 3 167 10 179 7.84e-14 72.0
MsG0580024322.01.T01 MTR_8g062270 29.717 212 126 7 12 200 18 229 1.58e-13 71.6
MsG0580024322.01.T01 MTR_4g056020 33.846 195 112 7 3 185 4 193 1.96e-13 71.2
MsG0580024322.01.T01 MTR_3g023470 29.834 181 116 4 4 176 9 186 2.52e-13 70.5
MsG0580024322.01.T01 MTR_8g014290 35.185 162 77 9 1 137 1 159 2.69e-13 67.4
MsG0580024322.01.T01 MTR_3g095640 32.759 174 95 4 3 154 2 175 2.76e-13 67.8
MsG0580024322.01.T01 MTR_1g013630 29.434 265 150 10 8 247 37 289 3.01e-13 70.5
MsG0580024322.01.T01 MTR_4g081030 29.279 222 140 6 12 228 19 228 3.95e-13 70.1
MsG0580024322.01.T01 MTR_5g039970 29.730 185 116 4 12 185 21 202 5.07e-13 69.3
MsG0580024322.01.T01 MTR_1g492880 45.570 79 37 2 1 77 1 75 5.09e-13 64.7
MsG0580024322.01.T01 MTR_1g492880 45.570 79 37 2 1 77 1 75 6.05e-13 64.7
MsG0580024322.01.T01 MTR_7g084080 33.571 140 87 4 3 139 10 146 7.26e-13 68.6
MsG0580024322.01.T01 MTR_3g048290 31.351 185 115 6 12 185 25 208 7.90e-13 69.3
MsG0580024322.01.T01 MTR_5g080710 45.588 68 36 1 226 292 354 421 1.14e-12 68.9
MsG0580024322.01.T01 MTR_5g080710 32.812 192 112 8 6 186 29 214 2.14e-12 68.2
MsG0580024322.01.T01 MTR_4g024720 43.158 95 43 4 2 87 11 103 1.23e-12 66.6
MsG0580024322.01.T01 MTR_2g047872 30.303 198 110 4 4 183 17 204 2.38e-12 67.8
MsG0580024322.01.T01 MTR_4g092440 32.653 147 81 4 3 139 25 163 3.27e-12 67.4
MsG0580024322.01.T01 MTR_3g463830 32.973 185 100 8 5 178 58 229 4.16e-12 66.6
MsG0580024322.01.T01 MTR_2g100590 34.010 197 99 11 12 185 44 232 4.19e-12 67.0
MsG0580024322.01.T01 MTR_2g100590 34.010 197 99 11 12 185 44 232 4.52e-12 67.4
MsG0580024322.01.T01 MTR_4g093690 32.039 206 112 8 1 184 1 200 4.70e-12 65.9
MsG0580024322.01.T01 MTR_6g033095 32.168 143 93 2 156 297 52 191 4.80e-12 64.7
MsG0580024322.01.T01 MTR_8g468840 30.675 163 96 5 12 157 16 178 4.93e-12 67.0
MsG0580024322.01.T01 MTR_6g092430 30.939 181 112 5 1 169 1 180 5.57e-12 66.6
MsG0580024322.01.T01 MTR_0438s0020 27.917 240 137 7 4 219 62 289 5.82e-12 66.6
MsG0580024322.01.T01 MTR_4g092440 32.653 147 81 4 3 139 25 163 5.90e-12 67.0
MsG0580024322.01.T01 MTR_2g100590 34.010 197 99 11 12 185 44 232 6.36e-12 66.6
MsG0580024322.01.T01 MTR_5g040850 28.042 189 122 4 8 183 5 192 6.85e-12 66.2
MsG0580024322.01.T01 MTR_1g011410 32.418 182 113 3 12 185 317 496 7.18e-12 66.6
MsG0580024322.01.T01 MTR_4g080590 28.302 212 141 4 12 218 25 230 8.87e-12 65.9
MsG0580024322.01.T01 MTR_4g080590 28.302 212 141 4 12 218 25 230 9.51e-12 66.2
MsG0580024322.01.T01 MTR_4g032730 31.343 201 120 6 3 185 8 208 1.29e-11 65.9
MsG0580024322.01.T01 MTR_1g016340 29.817 218 113 5 1 188 1 208 1.82e-11 65.1
MsG0580024322.01.T01 MTR_1g016340 30.198 202 106 4 12 188 22 213 2.16e-11 65.1
MsG0580024322.01.T01 MTR_1g021825 30.769 182 112 5 12 183 19 196 2.24e-11 64.7
MsG0580024322.01.T01 MTR_6g018600 31.928 166 93 4 12 166 54 210 2.53e-11 64.7
MsG0580024322.01.T01 MTR_1g021825 30.769 182 112 5 12 183 90 267 3.47e-11 64.3
MsG0580024322.01.T01 MTR_1g016310 29.808 208 120 5 1 185 3 207 4.02e-11 63.5
MsG0580024322.01.T01 MTR_4g056030 32.308 195 115 8 3 185 4 193 4.15e-11 64.3
MsG0580024322.01.T01 MTR_2g094750 27.753 227 128 8 3 193 83 309 4.28e-11 64.3
MsG0580024322.01.T01 MTR_4g024680 31.548 168 109 4 8 171 152 317 4.40e-11 64.3
MsG0580024322.01.T01 MTR_1g094760 36.709 79 50 0 4 82 20 98 4.44e-11 64.3
MsG0580024322.01.T01 MTR_7g023310 25.131 191 130 5 2 185 21 205 4.87e-11 63.9
MsG0580024322.01.T01 MTR_8g062300 28.444 225 126 9 12 202 28 251 5.03e-11 63.9
MsG0580024322.01.T01 MTR_8g467800 36.607 112 64 3 12 116 22 133 5.31e-11 63.5
MsG0580024322.01.T01 MTR_1g013580 28.324 173 111 3 12 171 21 193 6.14e-11 63.5
MsG0580024322.01.T01 MTR_1g016310 30.097 206 118 5 1 183 3 205 7.12e-11 63.5
MsG0580024322.01.T01 MTR_8g468760 30.189 159 93 5 4 144 3 161 7.62e-11 63.2
MsG0580024322.01.T01 MTR_3g107140 29.586 169 96 5 41 190 23 187 7.93e-11 61.2
MsG0580024322.01.T01 MTR_5g092960 31.507 146 83 5 12 141 21 165 8.01e-11 63.2
MsG0580024322.01.T01 MTR_2g047848 25.381 197 133 3 7 190 4 199 9.40e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024322.01.T01 AT4G09920 36.458 192 111 5 12 195 4 192 4.71e-24 100
MsG0580024322.01.T01 AT4G09920 36.458 192 111 5 12 195 4 192 4.71e-24 100
MsG0580024322.01.T01 AT4G09920 36.458 192 111 5 12 195 4 192 4.71e-24 100
MsG0580024322.01.T01 AT4G09920 36.458 192 111 5 12 195 4 192 7.85e-24 100
MsG0580024322.01.T01 AT4G09920 36.458 192 111 5 12 195 4 192 7.85e-24 100
MsG0580024322.01.T01 AT5G56380 34.555 191 108 5 12 188 4 191 1.42e-22 98.2
MsG0580024322.01.T01 AT5G56380 34.555 191 108 5 12 188 4 191 1.42e-22 98.2
MsG0580024322.01.T01 AT4G10400 36.813 182 104 5 12 185 4 182 1.80e-22 97.4
MsG0580024322.01.T01 AT4G10400 36.813 182 104 5 12 185 4 182 1.80e-22 97.4
MsG0580024322.01.T01 AT4G10400 36.813 182 104 5 12 185 4 182 1.80e-22 97.4
MsG0580024322.01.T01 AT4G00315 33.684 190 117 4 15 195 7 196 2.96e-22 97.4
MsG0580024322.01.T01 AT5G53635 37.222 180 105 5 12 185 2 179 1.57e-21 95.1
MsG0580024322.01.T01 AT5G53640 32.065 184 120 4 4 185 16 196 1.67e-21 91.7
MsG0580024322.01.T01 AT4G26340 34.426 183 112 4 12 188 4 184 5.74e-21 93.6
MsG0580024322.01.T01 AT3G59200 35.979 189 102 6 12 185 9 193 1.00e-20 92.0
MsG0580024322.01.T01 AT5G38590 27.273 286 165 9 12 291 4 252 1.31e-20 90.5
MsG0580024322.01.T01 AT3G59200 35.979 189 102 6 12 185 9 193 1.66e-20 92.8
MsG0580024322.01.T01 AT1G16930 31.217 189 123 4 2 185 7 193 3.14e-20 91.7
MsG0580024322.01.T01 AT1G16930 31.217 189 123 4 2 185 7 193 3.14e-20 91.7
MsG0580024322.01.T01 AT1G16930 31.217 189 123 4 2 185 7 193 3.14e-20 91.7
MsG0580024322.01.T01 AT1G55660 34.426 183 111 5 12 185 55 237 3.57e-20 90.5
MsG0580024322.01.T01 AT5G56420 34.426 183 112 4 12 188 8 188 4.86e-20 90.9
MsG0580024322.01.T01 AT5G56420 34.426 183 112 4 12 188 8 188 4.86e-20 90.9
MsG0580024322.01.T01 AT5G56420 34.426 183 112 4 12 188 8 188 4.86e-20 90.9
MsG0580024322.01.T01 AT1G55660 33.161 193 120 5 12 195 55 247 8.77e-20 90.5
MsG0580024322.01.T01 AT5G25850 34.286 175 112 3 12 185 22 194 2.78e-19 89.0
MsG0580024322.01.T01 AT4G15060 32.967 182 114 3 12 185 28 209 5.27e-19 87.8
MsG0580024322.01.T01 AT4G15060 32.967 182 114 3 12 185 174 355 6.44e-19 87.8
MsG0580024322.01.T01 AT1G69630 32.967 182 107 4 12 183 20 196 6.60e-19 87.8
MsG0580024322.01.T01 AT5G38590 34.444 180 109 4 12 185 4 180 1.79e-18 84.7
MsG0580024322.01.T01 AT5G38590 34.444 180 109 4 12 185 4 180 4.46e-18 85.1
MsG0580024322.01.T01 AT5G56370 37.222 180 102 6 11 183 3 178 1.21e-17 82.8
MsG0580024322.01.T01 AT5G22670 31.818 198 124 4 11 206 12 200 1.29e-17 84.0
MsG0580024322.01.T01 AT5G56370 37.222 180 102 6 11 183 3 178 1.35e-17 83.6
MsG0580024322.01.T01 AT5G56370 37.222 180 102 6 11 183 3 178 1.35e-17 83.6
MsG0580024322.01.T01 AT2G26030 32.584 178 110 6 14 184 8 182 2.09e-17 83.2
MsG0580024322.01.T01 AT2G26030 32.584 178 110 6 14 184 8 182 2.09e-17 83.2
MsG0580024322.01.T01 AT3G59170 31.905 210 106 7 12 185 9 217 2.23e-17 83.2
MsG0580024322.01.T01 AT2G26030 32.584 178 110 6 14 184 8 182 2.63e-17 82.8
MsG0580024322.01.T01 AT2G26860 33.023 215 125 7 12 214 4 211 2.86e-17 82.4
MsG0580024322.01.T01 AT2G26860 33.023 215 125 7 12 214 4 211 2.86e-17 82.4
MsG0580024322.01.T01 AT5G56400 33.696 184 112 5 12 188 35 215 5.76e-17 82.0
MsG0580024322.01.T01 AT4G14103 32.258 186 113 5 11 185 9 192 7.86e-17 80.9
MsG0580024322.01.T01 AT4G14103 32.258 186 113 5 11 185 9 192 7.86e-17 80.9
MsG0580024322.01.T01 AT4G14103 32.258 186 113 5 11 185 9 192 8.57e-17 81.3
MsG0580024322.01.T01 AT5G22610 31.500 200 121 6 12 201 20 213 9.55e-17 81.3
MsG0580024322.01.T01 AT3G42770 34.634 205 104 8 15 199 4 198 1.03e-16 81.3
MsG0580024322.01.T01 AT4G14096 31.088 193 119 5 12 196 10 196 1.43e-16 80.9
MsG0580024322.01.T01 AT4G14096 31.088 193 119 5 12 196 10 196 1.43e-16 80.9
MsG0580024322.01.T01 AT5G22610 31.818 198 119 6 12 199 20 211 1.64e-16 80.9
MsG0580024322.01.T01 AT2G04230 31.188 202 113 6 12 195 15 208 1.94e-16 80.1
MsG0580024322.01.T01 AT5G56410 31.193 218 121 6 17 210 10 222 2.11e-16 80.5
MsG0580024322.01.T01 AT5G62970 32.161 199 104 4 17 185 10 207 2.62e-16 79.7
MsG0580024322.01.T01 AT5G56560 33.149 181 115 5 7 183 2 180 2.73e-16 79.7
MsG0580024322.01.T01 AT1G60400 28.279 244 147 6 12 241 16 245 3.82e-16 79.3
MsG0580024322.01.T01 AT5G56560 33.149 181 115 5 7 183 2 180 4.43e-16 79.7
MsG0580024322.01.T01 AT5G41830 33.503 197 105 9 12 185 15 208 5.22e-16 79.3
MsG0580024322.01.T01 AT5G41840 30.622 209 114 8 12 194 16 219 7.71e-16 78.6
MsG0580024322.01.T01 AT1G32375 32.447 188 112 6 12 188 4 187 8.66e-16 78.2
MsG0580024322.01.T01 AT1G32375 32.447 188 112 6 12 188 4 187 8.66e-16 78.2
MsG0580024322.01.T01 AT5G44940 30.978 184 116 5 12 185 7 189 1.50e-15 77.4
MsG0580024322.01.T01 AT1G66290 30.435 184 103 6 12 183 31 201 1.99e-15 77.4
MsG0580024322.01.T01 AT3G58940 33.005 203 100 10 12 186 4 198 4.23e-15 76.6
MsG0580024322.01.T01 AT3G58940 33.005 203 100 10 12 186 4 198 4.23e-15 76.6
MsG0580024322.01.T01 AT3G59210 32.143 196 100 6 12 185 9 193 6.53e-15 75.9
MsG0580024322.01.T01 AT3G59210 32.143 196 100 6 12 185 9 193 6.53e-15 75.9
MsG0580024322.01.T01 AT3G59210 32.143 196 100 6 12 185 9 193 6.53e-15 75.9
MsG0580024322.01.T01 AT3G59210 32.143 196 100 6 12 185 9 193 6.53e-15 75.9
MsG0580024322.01.T01 AT3G59210 32.143 196 100 6 12 185 9 193 6.53e-15 75.9
MsG0580024322.01.T01 AT4G00160 31.771 192 121 5 12 195 18 207 8.02e-15 75.5
MsG0580024322.01.T01 AT3G59190 30.526 190 114 6 12 185 14 201 8.09e-15 75.1
MsG0580024322.01.T01 AT3G59240 28.426 197 121 5 12 195 10 199 9.60e-15 75.5
MsG0580024322.01.T01 AT4G13985 26.923 208 137 6 2 195 11 217 1.07e-14 75.1
MsG0580024322.01.T01 AT3G59190 30.526 190 114 6 12 185 14 201 1.50e-14 74.7
MsG0580024322.01.T01 AT1G52650 29.612 206 127 5 12 203 4 205 1.63e-14 74.7
MsG0580024322.01.T01 AT3G58930 30.769 195 112 6 12 185 4 196 1.66e-14 74.7
MsG0580024322.01.T01 AT3G58930 30.769 195 112 6 12 185 4 196 1.66e-14 74.7
MsG0580024322.01.T01 AT3G58930 30.769 195 112 6 12 185 4 196 1.66e-14 74.7
MsG0580024322.01.T01 AT5G60610 32.178 202 126 6 12 209 4 198 1.69e-14 74.3
MsG0580024322.01.T01 AT5G60610 32.178 202 126 6 12 209 4 198 1.69e-14 74.3
MsG0580024322.01.T01 AT5G41630 32.836 201 99 7 12 185 14 205 2.06e-14 74.3
MsG0580024322.01.T01 AT5G25860 29.612 206 116 8 11 190 13 215 2.30e-14 73.9
MsG0580024322.01.T01 AT5G44950 31.285 179 117 4 12 185 6 183 2.45e-14 73.9
MsG0580024322.01.T01 AT3G44810 30.918 207 125 6 9 199 6 210 2.84e-14 73.9
MsG0580024322.01.T01 AT5G56690 33.155 187 105 6 12 183 4 185 3.01e-14 73.6
MsG0580024322.01.T01 AT3G44060 31.383 188 110 7 12 185 1 183 3.25e-14 73.6
MsG0580024322.01.T01 AT1G51370 31.250 176 114 5 12 185 21 191 3.77e-14 72.8
MsG0580024322.01.T01 AT4G13965 30.366 191 120 6 12 195 12 196 3.89e-14 73.2
MsG0580024322.01.T01 AT5G53840 32.461 191 115 7 2 185 10 193 4.17e-14 73.2
MsG0580024322.01.T01 AT5G56820 31.579 190 119 4 1 185 6 189 4.63e-14 73.2
MsG0580024322.01.T01 AT1G51370 31.250 176 114 5 12 185 21 191 5.11e-14 72.8
MsG0580024322.01.T01 AT3G50710 29.891 184 117 4 12 185 4 185 5.15e-14 72.8
MsG0580024322.01.T01 AT1G51370 31.250 176 114 5 12 185 21 191 5.47e-14 72.8
MsG0580024322.01.T01 AT4G13960 30.583 206 124 5 12 203 4 204 5.66e-14 72.8
MsG0580024322.01.T01 AT4G13960 30.583 206 124 5 12 203 4 204 5.66e-14 72.8
MsG0580024322.01.T01 AT1G78760 27.273 209 130 7 2 195 4 205 6.20e-14 72.8
MsG0580024322.01.T01 AT4G00320 30.102 196 113 8 12 185 15 208 6.53e-14 72.8
MsG0580024322.01.T01 AT3G44080 32.402 179 102 6 5 167 2 177 6.81e-14 72.4
MsG0580024322.01.T01 AT5G22730 26.455 189 113 4 12 185 30 207 7.53e-14 72.4
MsG0580024322.01.T01 AT3G49150 32.353 204 111 11 1 186 8 202 8.83e-14 72.4
MsG0580024322.01.T01 AT3G26922 28.261 184 115 6 12 185 16 192 9.19e-14 71.2
MsG0580024322.01.T01 AT3G26922 28.261 184 115 6 12 185 16 192 9.19e-14 71.2
MsG0580024322.01.T01 AT5G22730 26.455 189 113 4 12 185 30 207 9.84e-14 72.4
MsG0580024322.01.T01 AT5G22730 26.455 189 113 4 12 185 30 207 9.84e-14 72.4
MsG0580024322.01.T01 AT3G51530 32.044 181 114 6 12 188 32 207 1.13e-13 72.0
MsG0580024322.01.T01 AT1G58310 27.907 215 99 8 12 185 10 209 1.16e-13 72.0
MsG0580024322.01.T01 AT3G58880 29.741 232 128 8 12 222 5 222 1.42e-13 71.6
MsG0580024322.01.T01 AT5G50270 35.165 182 108 6 12 185 4 183 1.63e-13 70.5
MsG0580024322.01.T01 AT3G52680 31.250 192 121 5 12 195 23 211 2.11e-13 71.2
MsG0580024322.01.T01 AT3G52680 31.319 182 114 5 12 185 23 201 2.34e-13 70.5
MsG0580024322.01.T01 AT3G49040 31.351 185 111 7 12 185 19 198 2.42e-13 70.1
MsG0580024322.01.T01 AT5G50270 34.595 185 111 6 12 188 4 186 3.02e-13 70.5
MsG0580024322.01.T01 AT1G56610 30.846 201 115 8 1 185 1 193 4.03e-13 70.5
MsG0580024322.01.T01 AT5G22720 29.570 186 124 4 6 185 19 203 4.46e-13 70.1
MsG0580024322.01.T01 AT5G56440 30.726 179 119 3 12 185 4 182 7.15e-13 69.3
MsG0580024322.01.T01 AT1G55030 28.571 189 131 3 9 195 18 204 7.18e-13 69.3
MsG0580024322.01.T01 AT1G26890 32.919 161 101 4 10 167 38 194 7.85e-13 68.6
MsG0580024322.01.T01 AT1G26890 32.919 161 101 4 10 167 38 194 7.85e-13 68.6
MsG0580024322.01.T01 AT1G55030 28.571 189 131 3 9 195 8 194 8.32e-13 69.3
MsG0580024322.01.T01 AT3G59230 29.381 194 115 7 12 185 14 205 8.47e-13 69.3
MsG0580024322.01.T01 AT1G56610 30.846 201 115 8 1 185 64 256 9.02e-13 69.3
MsG0580024322.01.T01 AT4G26350 31.492 181 114 6 12 185 4 181 1.08e-12 68.9
MsG0580024322.01.T01 AT1G26890 31.875 160 104 3 10 167 38 194 1.86e-12 68.2
MsG0580024322.01.T01 AT1G26890 31.875 160 104 3 10 167 38 194 2.13e-12 67.8
MsG0580024322.01.T01 AT1G26890 31.875 160 104 3 10 167 38 194 2.13e-12 67.8
MsG0580024322.01.T01 AT3G58920 30.244 205 113 8 12 195 4 199 3.80e-12 67.4
MsG0580024322.01.T01 AT5G22660 34.270 178 110 5 12 185 15 189 4.01e-12 66.6
MsG0580024322.01.T01 AT3G44090 29.000 200 113 7 5 185 19 208 4.03e-12 67.4
MsG0580024322.01.T01 AT3G58860 27.363 201 117 5 5 185 2 193 4.21e-12 67.4
MsG0580024322.01.T01 AT5G56810 33.333 186 115 6 12 190 17 200 4.55e-12 66.2
MsG0580024322.01.T01 AT5G56810 33.333 186 115 6 12 190 17 200 5.09e-12 67.0
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 45 219 5.71e-12 66.6
MsG0580024322.01.T01 AT5G22660 34.270 178 110 5 12 185 15 189 5.76e-12 66.6
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 8 182 6.85e-12 66.6
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 8 182 6.85e-12 66.6
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 8 182 6.85e-12 66.6
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 8 182 6.85e-12 66.6
MsG0580024322.01.T01 AT3G58980 34.586 133 79 4 12 139 4 133 6.87e-12 67.0
MsG0580024322.01.T01 AT5G22700 33.333 183 105 6 12 185 45 219 7.49e-12 66.6
MsG0580024322.01.T01 AT1G80470 28.571 196 128 6 1 185 1 195 1.00e-11 66.2
MsG0580024322.01.T01 AT3G23955 26.543 324 191 10 15 296 62 380 1.16e-11 65.9
MsG0580024322.01.T01 AT5G38396 26.804 194 119 5 12 185 4 194 1.16e-11 65.9
MsG0580024322.01.T01 AT3G60040 27.778 234 133 8 11 217 14 238 1.20e-11 66.2
MsG0580024322.01.T01 AT3G03040 31.515 165 93 6 12 159 4 165 1.24e-11 65.9
MsG0580024322.01.T01 AT5G44980 29.834 181 120 5 12 185 6 186 1.25e-11 65.1
MsG0580024322.01.T01 AT5G44980 29.834 181 120 5 12 185 6 186 1.25e-11 65.1
MsG0580024322.01.T01 AT1G66320 28.977 176 113 5 15 183 35 205 1.31e-11 65.9
MsG0580024322.01.T01 AT2G42720 31.250 224 134 8 12 221 4 221 1.46e-11 65.5
MsG0580024322.01.T01 AT5G44980 29.834 181 120 5 12 185 6 186 1.74e-11 65.5
MsG0580024322.01.T01 AT5G44980 29.834 181 120 5 12 185 6 186 1.74e-11 65.5
MsG0580024322.01.T01 AT1G21990 29.911 224 134 9 12 222 11 224 1.84e-11 65.5
MsG0580024322.01.T01 AT5G38392 26.804 194 119 5 12 185 4 194 2.41e-11 63.2
MsG0580024322.01.T01 AT3G60040 27.778 234 133 8 11 217 234 458 2.44e-11 65.5
MsG0580024322.01.T01 AT3G60040 27.778 234 133 8 11 217 233 457 2.48e-11 65.5
MsG0580024322.01.T01 AT3G60040 27.778 234 133 8 11 217 231 455 2.65e-11 65.1
MsG0580024322.01.T01 AT3G60040 27.778 234 133 8 11 217 233 457 2.67e-11 65.1
MsG0580024322.01.T01 AT5G18780 26.749 243 140 7 12 245 13 226 3.06e-11 64.7
MsG0580024322.01.T01 AT5G18780 26.749 243 140 7 12 245 13 226 3.06e-11 64.7
MsG0580024322.01.T01 AT3G58960 29.121 182 120 6 12 185 4 184 3.83e-11 64.3
MsG0580024322.01.T01 AT5G18780 26.749 243 140 7 12 245 13 226 4.12e-11 63.9
MsG0580024322.01.T01 AT5G18780 26.749 243 140 7 12 245 13 226 4.12e-11 63.9
MsG0580024322.01.T01 AT3G56780 30.303 165 100 5 6 162 3 160 4.17e-11 64.3
MsG0580024322.01.T01 AT2G29910 29.817 218 128 8 12 217 7 211 4.64e-11 63.5
MsG0580024322.01.T01 AT2G29910 29.817 218 128 8 12 217 7 211 4.64e-11 63.5
MsG0580024322.01.T01 AT2G29910 29.817 218 128 8 12 217 7 211 4.64e-11 63.5
MsG0580024322.01.T01 AT2G29910 29.817 218 128 8 12 217 7 211 4.64e-11 63.5
MsG0580024322.01.T01 AT3G56780 30.303 165 100 5 6 162 3 160 4.72e-11 63.9
MsG0580024322.01.T01 AT2G29910 29.817 218 128 8 12 217 31 235 4.74e-11 63.9
MsG0580024322.01.T01 AT2G29930 30.387 181 115 5 12 186 14 189 5.26e-11 63.9
MsG0580024322.01.T01 AT2G29930 30.387 181 115 5 12 186 14 189 5.26e-11 63.9
MsG0580024322.01.T01 AT3G56780 30.303 165 100 5 6 162 3 160 5.34e-11 63.5
MsG0580024322.01.T01 AT1G16940 30.319 188 121 6 1 183 1 183 5.49e-11 63.9
MsG0580024322.01.T01 AT2G29910 29.741 232 135 9 12 231 7 222 5.55e-11 63.2
MsG0580024322.01.T01 AT2G29910 29.741 232 135 9 12 231 7 222 5.55e-11 63.2
MsG0580024322.01.T01 AT1G13780 29.319 191 116 5 12 185 12 200 5.63e-11 63.9
MsG0580024322.01.T01 AT1G48400 30.000 200 126 6 1 188 1 198 5.97e-11 63.9
MsG0580024322.01.T01 AT1G13780 29.319 191 116 5 12 185 12 200 6.69e-11 63.2
MsG0580024322.01.T01 AT1G78840 26.923 208 141 7 15 217 11 212 6.95e-11 63.5
MsG0580024322.01.T01 AT1G78840 26.923 208 141 7 15 217 11 212 6.95e-11 63.5
MsG0580024322.01.T01 AT1G48400 30.000 200 126 6 1 188 1 198 7.02e-11 63.5
MsG0580024322.01.T01 AT1G78730 27.778 180 114 4 4 183 16 179 7.05e-11 63.5
MsG0580024322.01.T01 AT3G58900 31.183 186 111 6 14 185 6 188 8.27e-11 62.8
MsG0580024322.01.T01 AT4G27050 30.392 204 112 6 9 186 3 202 8.79e-11 63.2
MsG0580024322.01.T01 AT4G27050 30.392 204 112 6 9 186 3 202 8.79e-11 63.2
MsG0580024322.01.T01 AT4G27050 30.392 204 112 6 9 186 3 202 8.79e-11 63.2
MsG0580024322.01.T01 AT4G27050 30.392 204 112 6 9 186 3 202 8.79e-11 63.2
MsG0580024322.01.T01 AT4G27050 30.392 204 112 6 9 186 3 202 8.79e-11 63.2
MsG0580024322.01.T01 AT3G26930 30.570 193 112 5 12 195 23 202 9.30e-11 63.2

Find 65 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCAACTGTATAAGCAATT+TGG 0.291944 5:-3355660 None:intergenic
CAAATTGCTTATACAGTTGC+AGG 0.301176 5:+3355661 MsG0580024322.01.T01:CDS
GTGGAATGTCAGAAATTGTT+AGG 0.320220 5:-3355854 None:intergenic
TGCATATACATCTTCTAGAT+TGG 0.328557 5:-3355826 None:intergenic
AGCTGTGACGAAAGACATTC+TGG 0.342435 5:-3356405 None:intergenic
CTTTGGGACTACGAAGGCTT+TGG 0.347324 5:-3356632 None:intergenic
TTCCACCGTCGGTGGAAAAC+GGG 0.352629 5:+3355871 MsG0580024322.01.T01:CDS
TGTATAAGCAATTTGGCAAA+TGG 0.370637 5:-3355653 None:intergenic
TAAAAGGCCTCACAAAGCTT+TGG 0.375924 5:-3356649 None:intergenic
TTTGGGACTACGAAGGCTTT+GGG 0.376821 5:-3356631 None:intergenic
ACGAGAGATGCGGCTGCTAC+TGG 0.399984 5:+3355372 MsG0580024322.01.T01:CDS
CAATCGTTACGCCTCATTTG+TGG 0.403520 5:+3355525 MsG0580024322.01.T01:CDS
AAAAGGCCTCACAAAGCTTT+GGG 0.404824 5:-3356648 None:intergenic
ATTCCACCGTCGGTGGAAAA+CGG 0.417399 5:+3355870 MsG0580024322.01.T01:CDS
TGTCATCGAATTCAAGAGAA+TGG 0.417845 5:-3355434 None:intergenic
TTGCGAAACTTGCGGAAGTC+AGG 0.428831 5:-3355465 None:intergenic
GCATATACATCTTCTAGATT+GGG 0.432149 5:-3355825 None:intergenic
ATTACTCAAATCTCTATACT+TGG 0.442780 5:+3355749 MsG0580024322.01.T01:CDS
AGACATTCTGGAACAATTTG+TGG 0.448879 5:-3356393 None:intergenic
AGCCTCGCTGAAAGGAATTC+AGG 0.463603 5:+3355596 MsG0580024322.01.T01:CDS
AATATCTGCTCTGACCAACT+TGG 0.467397 5:-3355907 None:intergenic
GTATAAGCAATTTGGCAAAT+GGG 0.467710 5:-3355652 None:intergenic
ATGTGACACAGAACGCAGTC+AGG 0.474131 5:-3355333 None:intergenic
CAAAGAGGTGGAAACCACTT+TGG 0.481389 5:+3355403 MsG0580024322.01.T01:CDS
GCATTACAAAGCATTGGAAA+AGG 0.487108 5:-3355945 None:intergenic
AACTGTGCATTACAAAGCAT+TGG 0.489217 5:-3355951 None:intergenic
TAGCAGCCGCATCTCTCGTC+GGG 0.489540 5:-3355368 None:intergenic
TGATCTAAAGCAATCAATGT+TGG 0.509948 5:+3356545 MsG0580024322.01.T01:CDS
CATTACAAAGCATTGGAAAA+GGG 0.513974 5:-3355944 None:intergenic
AGTAGCATTGCGTAGCTTGA+GGG 0.521784 5:-3355694 None:intergenic
AAGTAGCATTGCGTAGCTTG+AGG 0.522596 5:-3355695 None:intergenic
CACAAATGAGGCGTAACGAT+TGG 0.531248 5:-3355524 None:intergenic
CTTTATGCAGCCTCGCTGAA+AGG 0.532140 5:+3355588 MsG0580024322.01.T01:CDS
AAGTATAGAGATTTGAGTAA+TGG 0.539731 5:-3355747 None:intergenic
TCTTCACTTTGACGTAAAGC+CGG 0.553306 5:+3356608 MsG0580024322.01.T01:CDS
TTCTGACATTCCACCGTCGG+TGG 0.553740 5:+3355863 MsG0580024322.01.T01:CDS
GATCACATATGTGTAAATGA+AGG 0.556107 5:+3356357 MsG0580024322.01.T01:CDS
AATGAGGCGTAACGATTGGA+TGG 0.561393 5:-3355520 None:intergenic
TATGTGTAAATGAAGGCCAT+TGG 0.563242 5:+3356364 MsG0580024322.01.T01:CDS
GGCTGAACTCCTACCCAAGT+TGG 0.563670 5:+3355893 MsG0580024322.01.T01:CDS
ATATCTGCTCTGACCAACTT+GGG 0.564011 5:-3355906 None:intergenic
TGGAATGTCAGAAATTGTTA+GGG 0.565946 5:-3355853 None:intergenic
GTTGAAATCATCAAGATCAA+AGG 0.566590 5:-3355559 None:intergenic
TGGAGTAAGAAGAGTACAAA+CGG 0.574385 5:-3355629 None:intergenic
TGATGAAATTGCGAAACTTG+CGG 0.581246 5:-3355473 None:intergenic
GTAGCAGCCGCATCTCTCGT+CGG 0.582420 5:-3355369 None:intergenic
GGACTACGAAGGCTTTGGGC+CGG 0.588525 5:-3356627 None:intergenic
AATTAATAAAGCCACAAATG+AGG 0.590358 5:-3355536 None:intergenic
TTCACATTCAAACATTACAA+AGG 0.595562 5:+3356435 MsG0580024322.01.T01:CDS
GAATGGAGTGAGAGCCAAAG+TGG 0.596783 5:-3355417 None:intergenic
CTGCTCTGACCAACTTGGGT+AGG 0.597948 5:-3355902 None:intergenic
TAATGGAAAATCAACACCGC+AGG 0.604831 5:-3355730 None:intergenic
TCCACCGTCGGTGGAAAACG+GGG 0.606516 5:+3355872 MsG0580024322.01.T01:CDS
CGTAGTCCCAAAGCTTTGTG+AGG 0.609399 5:+3356642 MsG0580024322.01.T01:CDS
CAATTTGTGGATCACTCCAA+TGG 0.615140 5:-3356380 None:intergenic
CAGCCGCATCTCTCGTCGGG+AGG 0.619128 5:-3355365 None:intergenic
TAAGCAATTTGGCAAATGGG+TGG 0.622791 5:-3355649 None:intergenic
AATTTCTGACATTCCACCGT+CGG 0.623005 5:+3355860 MsG0580024322.01.T01:CDS
AAGAAGAGTACAAACGGACG+TGG 0.628157 5:-3355623 None:intergenic
ATTCCTCCCGACGAGAGATG+CGG 0.638564 5:+3355362 MsG0580024322.01.T01:CDS
TGTGACACAGAACGCAGTCA+GGG 0.639216 5:-3355332 None:intergenic
ACAAAGCTTTGGGACTACGA+AGG 0.647038 5:-3356638 None:intergenic
GTCAAAGTGAAGATTACATG+TGG 0.661431 5:-3356598 None:intergenic
TTCCTGAATTCCTTTCAGCG+AGG 0.665139 5:-3355598 None:intergenic
ACTTTGAATTGCTCTTCCTG+CGG 0.679914 5:+3355714 MsG0580024322.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGCATAACTTAATTTATTT+TGG + Chr5:3356302-3356321 MsG0580024322.01.T01:intron 15.0%
!! ACAAAAATAAATTTGCGTAT+TGG + Chr5:3356326-3356345 MsG0580024322.01.T01:intron 20.0%
!!! AAACTTTCTATTTTTGTCTA+AGG + Chr5:3356568-3356587 MsG0580024322.01.T01:CDS 20.0%
!!! AACTTTCTATTTTTGTCTAA+GGG + Chr5:3356569-3356588 MsG0580024322.01.T01:CDS 20.0%
!!! TATTTCTTCAAGTTTTTTTG+CGG + Chr5:3355798-3355817 MsG0580024322.01.T01:CDS 20.0%
! AAGTATAGAGATTTGAGTAA+TGG - Chr5:3355750-3355769 None:intergenic 25.0%
! AATTAAGTTATGCATAAGTG+TGG - Chr5:3356297-3356316 None:intergenic 25.0%
! AATTAATAAAGCCACAAATG+AGG - Chr5:3355539-3355558 None:intergenic 25.0%
! ATTAAGTTATGCATAAGTGT+GGG - Chr5:3356296-3356315 None:intergenic 25.0%
! ATTACTCAAATCTCTATACT+TGG + Chr5:3355749-3355768 MsG0580024322.01.T01:CDS 25.0%
! TTCACATTCAAACATTACAA+AGG + Chr5:3356435-3356454 MsG0580024322.01.T01:CDS 25.0%
!! TTTCATGTCAATAGAACTTT+TGG + Chr5:3356075-3356094 MsG0580024322.01.T01:intron 25.0%
!!! ACTTTCTATTTTTGTCTAAG+GGG + Chr5:3356570-3356589 MsG0580024322.01.T01:CDS 25.0%
AGCGTTTGAATTCAAATGTA+AGG - Chr5:3356165-3356184 None:intergenic 30.0%
GATCACATATGTGTAAATGA+AGG + Chr5:3356357-3356376 MsG0580024322.01.T01:CDS 30.0%
GCATATACATCTTCTAGATT+GGG - Chr5:3355828-3355847 None:intergenic 30.0%
GTATAAGCAATTTGGCAAAT+GGG - Chr5:3355655-3355674 None:intergenic 30.0%
GTTGAAATCATCAAGATCAA+AGG - Chr5:3355562-3355581 None:intergenic 30.0%
TCAAAATCTTACCATTCACA+AGG + Chr5:3356237-3356256 MsG0580024322.01.T01:intron 30.0%
TGCATATACATCTTCTAGAT+TGG - Chr5:3355829-3355848 None:intergenic 30.0%
TGGAATGTCAGAAATTGTTA+GGG - Chr5:3355856-3355875 None:intergenic 30.0%
TGTATAAGCAATTTGGCAAA+TGG - Chr5:3355656-3355675 None:intergenic 30.0%
! TGATCTAAAGCAATCAATGT+TGG + Chr5:3356545-3356564 MsG0580024322.01.T01:CDS 30.0%
!! CATTACAAAGCATTGGAAAA+GGG - Chr5:3355947-3355966 None:intergenic 30.0%
!!! AATGGTAAGATTTTGAAGCT+TGG - Chr5:3356233-3356252 None:intergenic 30.0%
!!! ATGGTAAGATTTTGAAGCTT+GGG - Chr5:3356232-3356251 None:intergenic 30.0%
AACTGTGCATTACAAAGCAT+TGG - Chr5:3355954-3355973 None:intergenic 35.0%
AATTTGCGTATTGGATACAC+AGG + Chr5:3356335-3356354 MsG0580024322.01.T01:intron 35.0%
ACAAAAGCAAACCTTGTGAA+TGG - Chr5:3356251-3356270 None:intergenic 35.0%
CAAATTGCTTATACAGTTGC+AGG + Chr5:3355661-3355680 MsG0580024322.01.T01:CDS 35.0%
CTGCAACTGTATAAGCAATT+TGG - Chr5:3355663-3355682 None:intergenic 35.0%
GTCAAAGTGAAGATTACATG+TGG - Chr5:3356601-3356620 None:intergenic 35.0%
GTGGAATGTCAGAAATTGTT+AGG - Chr5:3355857-3355876 None:intergenic 35.0%
TATGTGTAAATGAAGGCCAT+TGG + Chr5:3356364-3356383 MsG0580024322.01.T01:CDS 35.0%
TGATGAAATTGCGAAACTTG+CGG - Chr5:3355476-3355495 None:intergenic 35.0%
TGTCATCGAATTCAAGAGAA+TGG - Chr5:3355437-3355456 None:intergenic 35.0%
! TGGAGTAAGAAGAGTACAAA+CGG - Chr5:3355632-3355651 None:intergenic 35.0%
! TGGGTTAGATTGTTAAACGT+GGG - Chr5:3356115-3356134 None:intergenic 35.0%
! TGTAAGGTGTTTGAATTCGA+AGG - Chr5:3356149-3356168 None:intergenic 35.0%
!! AGACATTCTGGAACAATTTG+TGG - Chr5:3356396-3356415 None:intergenic 35.0%
!! GCATTACAAAGCATTGGAAA+AGG - Chr5:3355948-3355967 None:intergenic 35.0%
AATATCTGCTCTGACCAACT+TGG - Chr5:3355910-3355929 None:intergenic 40.0%
AATTTCTGACATTCCACCGT+CGG + Chr5:3355860-3355879 MsG0580024322.01.T01:CDS 40.0%
ACTTTGAATTGCTCTTCCTG+CGG + Chr5:3355714-3355733 MsG0580024322.01.T01:CDS 40.0%
AGTTATGCATAAGTGTGGGT+AGG - Chr5:3356292-3356311 None:intergenic 40.0%
ATATCTGCTCTGACCAACTT+GGG - Chr5:3355909-3355928 None:intergenic 40.0%
ATTCGAAGGTAAGGTTCATG+TGG - Chr5:3356135-3356154 None:intergenic 40.0%
CAATTTGTGGATCACTCCAA+TGG - Chr5:3356383-3356402 None:intergenic 40.0%
GGTGTTTGAATTCGAAGGTA+AGG - Chr5:3356144-3356163 None:intergenic 40.0%
GTTATGCATAAGTGTGGGTA+GGG - Chr5:3356291-3356310 None:intergenic 40.0%
TAAGCAATTTGGCAAATGGG+TGG - Chr5:3355652-3355671 None:intergenic 40.0%
TAATGGAAAATCAACACCGC+AGG - Chr5:3355733-3355752 None:intergenic 40.0%
TCTTCACTTTGACGTAAAGC+CGG + Chr5:3356608-3356627 MsG0580024322.01.T01:CDS 40.0%
TTCGAAGGTAAGGTTCATGT+GGG - Chr5:3356134-3356153 None:intergenic 40.0%
!! GTGGGTTAGATTGTTAAACG+TGG - Chr5:3356116-3356135 None:intergenic 40.0%
!!! CTACTGGCTTTTTGTCAAAG+AGG + Chr5:3355388-3355407 MsG0580024322.01.T01:CDS 40.0%
AAGTAGCATTGCGTAGCTTG+AGG - Chr5:3355698-3355717 None:intergenic 45.0%
AATGAGGCGTAACGATTGGA+TGG - Chr5:3355523-3355542 None:intergenic 45.0%
AGCTGTGACGAAAGACATTC+TGG - Chr5:3356408-3356427 None:intergenic 45.0%
AGTAGCATTGCGTAGCTTGA+GGG - Chr5:3355697-3355716 None:intergenic 45.0%
CAAAGAGGTGGAAACCACTT+TGG + Chr5:3355403-3355422 MsG0580024322.01.T01:CDS 45.0%
CAATCGTTACGCCTCATTTG+TGG + Chr5:3355525-3355544 MsG0580024322.01.T01:CDS 45.0%
CACAAATGAGGCGTAACGAT+TGG - Chr5:3355527-3355546 None:intergenic 45.0%
TCAAACGCTGCAATGTCATG+TGG + Chr5:3356176-3356195 MsG0580024322.01.T01:intron 45.0%
TTCCTGAATTCCTTTCAGCG+AGG - Chr5:3355601-3355620 None:intergenic 45.0%
! AAGAAGAGTACAAACGGACG+TGG - Chr5:3355626-3355645 None:intergenic 45.0%
! ACAGTTTTTGTGCGCACGAA+TGG + Chr5:3355968-3355987 MsG0580024322.01.T01:CDS 45.0%
! TTTGGGACTACGAAGGCTTT+GGG - Chr5:3356634-3356653 None:intergenic 45.0%
!! ACAAAGCTTTGGGACTACGA+AGG - Chr5:3356641-3356660 None:intergenic 45.0%
!! CTGGCTTTTTGTCAAAGAGG+TGG + Chr5:3355391-3355410 MsG0580024322.01.T01:CDS 45.0%
AGCCTCGCTGAAAGGAATTC+AGG + Chr5:3355596-3355615 MsG0580024322.01.T01:CDS 50.0%
ATGTGACACAGAACGCAGTC+AGG - Chr5:3355336-3355355 None:intergenic 50.0%
ATTCCACCGTCGGTGGAAAA+CGG + Chr5:3355870-3355889 MsG0580024322.01.T01:CDS 50.0%
CTTTATGCAGCCTCGCTGAA+AGG + Chr5:3355588-3355607 MsG0580024322.01.T01:CDS 50.0%
GAATGGAGTGAGAGCCAAAG+TGG - Chr5:3355420-3355439 None:intergenic 50.0%
TGTGACACAGAACGCAGTCA+GGG - Chr5:3355335-3355354 None:intergenic 50.0%
TTGCGAAACTTGCGGAAGTC+AGG - Chr5:3355468-3355487 None:intergenic 50.0%
!! CTTTGGGACTACGAAGGCTT+TGG - Chr5:3356635-3356654 None:intergenic 50.0%
ATTCCTCCCGACGAGAGATG+CGG + Chr5:3355362-3355381 MsG0580024322.01.T01:CDS 55.0%
CTGCTCTGACCAACTTGGGT+AGG - Chr5:3355905-3355924 None:intergenic 55.0%
GCTGCAATGTCATGTGGAGC+TGG + Chr5:3356182-3356201 MsG0580024322.01.T01:intron 55.0%
GGCTGAACTCCTACCCAAGT+TGG + Chr5:3355893-3355912 MsG0580024322.01.T01:CDS 55.0%
TTCCACCGTCGGTGGAAAAC+GGG + Chr5:3355871-3355890 MsG0580024322.01.T01:CDS 55.0%
TTCTGACATTCCACCGTCGG+TGG + Chr5:3355863-3355882 MsG0580024322.01.T01:CDS 55.0%
ACGAGAGATGCGGCTGCTAC+TGG + Chr5:3355372-3355391 MsG0580024322.01.T01:CDS 60.0%
GTAGCAGCCGCATCTCTCGT+CGG - Chr5:3355372-3355391 None:intergenic 60.0%
TAGCAGCCGCATCTCTCGTC+GGG - Chr5:3355371-3355390 None:intergenic 60.0%
TCCACCGTCGGTGGAAAACG+GGG + Chr5:3355872-3355891 MsG0580024322.01.T01:CDS 60.0%
! TCAGCCCCGTTTTCCACCGA+CGG - Chr5:3355879-3355898 None:intergenic 60.0%
!! GGACTACGAAGGCTTTGGGC+CGG - Chr5:3356630-3356649 None:intergenic 60.0%
CAGCCGCATCTCTCGTCGGG+AGG - Chr5:3355368-3355387 None:intergenic 70.0%
! GCCCCGTTTTCCACCGACGG+TGG - Chr5:3355876-3355895 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 3355288 3356662 3355288 ID=MsG0580024322.01;Name=MsG0580024322.01
Chr5 mRNA 3355288 3356662 3355288 ID=MsG0580024322.01.T01;Parent=MsG0580024322.01;Name=MsG0580024322.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|2|0|335
Chr5 exon 3355288 3355989 3355288 ID=MsG0580024322.01.T01:exon:1054;Parent=MsG0580024322.01.T01
Chr5 exon 3356357 3356662 3356357 ID=MsG0580024322.01.T01:exon:1055;Parent=MsG0580024322.01.T01
Chr5 CDS 3355288 3355989 3355288 ID=MsG0580024322.01.T01:cds;Parent=MsG0580024322.01.T01
Chr5 CDS 3356357 3356662 3356357 ID=MsG0580024322.01.T01:cds;Parent=MsG0580024322.01.T01
Gene Sequence

>MsG0580024322.01.T01

ATGGCATCTGACGAGAAGAAGAAGACGACGACGATCGAGTCGCTCCCTGACTGCGTTCTGTGTCACATTCTGTCATTCCTCCCGACGAGAGATGCGGCTGCTACTGGCTTTTTGTCAAAGAGGTGGAAACCACTTTGGCTCTCACTCCATTCTCTTGAATTCGATGACAAAAACTATCCTGACTTCCGCAAGTTTCGCAATTTCATCAATTCAGTTCTCTTCGCAAGAAACTCCATCCAATCGTTACGCCTCATTTGTGGCTTTATTAATTCCTTTGATCTTGATGATTTCAACTTATTTCTTTATGCAGCCTCGCTGAAAGGAATTCAGGAACTCCACGTCCGTTTGTACTCTTCTTACTCCACCCATTTGCCAAATTGCTTATACAGTTGCAGGACGCTTGTCACCCTCAAGCTACGCAATGCTACTTTGAATTGCTCTTCCTGCGGTGTTGATTTTCCATTACTCAAATCTCTATACTTGGACGATGTCATCTTTCAGAGTAGCGCTTATTTCTTCAAGTTTTTTTGCGGATGTCCCAATCTAGAAGATGTATATGCAAGAGCCCTAACAATTTCTGACATTCCACCGTCGGTGGAAAACGGGGCTGAACTCCTACCCAAGTTGGTCAGAGCAGATATTTCTTATAACTCTATCCCTTTTCCAATGCTTTGTAATGCACAGTTTTTGTGCGCACGAATGGATCACATATGTGTAAATGAAGGCCATTGGAGTGATCCACAAATTGTTCCAGAATGTCTTTCGTCACAGCTTAGAACATTCACATTCAAACATTACAAAGGCTCGAAAAGTGAGTTTCAGTTTGCTAAATATATTATGCAGACTTCAAAAGTACTACAAAATATGACAATTCACACAACTTTAGACATTGATCTAAAGCAATCAATGTTGGAAACTTTCTATTTTTGTCTAAGGGGCTCTGCCACATGTAATCTTCACTTTGACGTAAAGCCGGCCCAAAGCCTTCGTAGTCCCAAAGCTTTGTGA

Protein sequence

>MsG0580024322.01.T01

MASDEKKKTTTIESLPDCVLCHILSFLPTRDAAATGFLSKRWKPLWLSLHSLEFDDKNYPDFRKFRNFINSVLFARNSIQSLRLICGFINSFDLDDFNLFLYAASLKGIQELHVRLYSSYSTHLPNCLYSCRTLVTLKLRNATLNCSSCGVDFPLLKSLYLDDVIFQSSAYFFKFFCGCPNLEDVYARALTISDIPPSVENGAELLPKLVRADISYNSIPFPMLCNAQFLCARMDHICVNEGHWSDPQIVPECLSSQLRTFTFKHYKGSKSEFQFAKYIMQTSKVLQNMTIHTTLDIDLKQSMLETFYFCLRGSATCNLHFDVKPAQSLRSPKAL*