AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006146.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006146.01.T01 MTR_7g033915 50.336 298 108 7 1 280 1 276 7.10e-85 259
MsG0180006146.01.T01 MTR_7g033990 52.000 300 118 9 1 280 1 294 3.28e-83 256
MsG0180006146.01.T01 MTR_7g034110 50.000 294 96 9 1 281 1 256 2.83e-67 214
MsG0180006146.01.T01 MTR_7g032380 45.329 289 119 9 1 277 1 262 5.52e-65 208
MsG0180006146.01.T01 MTR_1g041245 44.186 301 133 10 1 277 1 290 3.20e-63 204
MsG0180006146.01.T01 MTR_7g033945 61.932 176 55 5 1 167 1 173 1.21e-61 193
MsG0180006146.01.T01 MTR_5g012840 41.860 258 105 6 36 284 13 234 2.17e-54 179
MsG0180006146.01.T01 MTR_7g034120 49.554 224 93 8 70 277 1 220 1.74e-53 177
MsG0180006146.01.T01 MTR_8g085430 49.315 219 80 8 1 198 1 209 9.23e-51 170
MsG0180006146.01.T01 MTR_7g115270 37.785 307 155 9 4 277 5 308 1.25e-49 169
MsG0180006146.01.T01 MTR_7g098510 39.161 286 150 9 11 277 17 297 1.47e-48 166
MsG0180006146.01.T01 MTR_7g034115 42.140 299 141 9 1 277 1 289 1.68e-48 166
MsG0180006146.01.T01 MTR_7g032370 41.045 268 133 8 24 277 2 258 1.34e-46 160
MsG0180006146.01.T01 MTR_7g056433 39.667 300 149 10 4 277 2 295 9.93e-44 154
MsG0180006146.01.T01 MTR_3g108150 37.874 301 146 11 4 277 6 292 4.81e-43 152
MsG0180006146.01.T01 MTR_3g040700 38.832 291 153 11 2 277 33 313 5.61e-43 152
MsG0180006146.01.T01 MTR_3g036250 38.790 281 149 9 11 277 4 275 5.25e-42 148
MsG0180006146.01.T01 MTR_7g098570 36.913 298 158 9 9 284 17 306 3.41e-41 149
MsG0180006146.01.T01 MTR_7g098480 36.986 292 160 11 11 284 17 302 4.13e-41 148
MsG0180006146.01.T01 MTR_3g108560 36.667 300 144 11 6 277 14 295 1.50e-40 143
MsG0180006146.01.T01 MTR_3g108560 35.168 327 155 12 6 293 14 322 4.37e-40 144
MsG0180006146.01.T01 MTR_7g114710 35.082 305 154 12 2 289 4 281 1.27e-38 139
MsG0180006146.01.T01 MTR_7g033940 58.268 127 45 2 11 129 93 219 4.65e-38 134
MsG0180006146.01.T01 MTR_7g056430 38.908 293 119 10 12 277 9 268 6.17e-38 143
MsG0180006146.01.T01 MTR_7g056420 39.000 300 122 11 5 277 3 268 7.17e-38 142
MsG0180006146.01.T01 MTR_7g056447 46.073 191 85 7 5 185 3 185 2.02e-37 134
MsG0180006146.01.T01 MTR_0492s0020 36.806 288 154 9 6 277 81 356 2.31e-36 135
MsG0180006146.01.T01 MTR_0492s0020 58.929 56 23 0 1 56 1 56 1.26e-12 68.2
MsG0180006146.01.T01 MTR_0543s0010 36.806 288 154 9 6 277 81 356 3.23e-36 135
MsG0180006146.01.T01 MTR_0543s0010 58.929 56 23 0 1 56 1 56 1.41e-12 68.2
MsG0180006146.01.T01 MTR_3g082890 36.184 304 147 11 12 277 17 311 1.08e-35 133
MsG0180006146.01.T01 MTR_3g082890 35.948 306 145 12 12 277 97 391 1.38e-35 134
MsG0180006146.01.T01 MTR_7g088260 36.111 288 153 11 12 277 91 369 1.00e-34 131
MsG0180006146.01.T01 MTR_2g005990 35.065 308 146 10 9 277 3 295 1.84e-34 129
MsG0180006146.01.T01 MTR_3g105060 35.531 273 145 12 2 251 5 269 8.05e-33 124
MsG0180006146.01.T01 MTR_3g023630 35.354 297 159 13 10 284 6 291 1.67e-32 123
MsG0180006146.01.T01 MTR_3g467400 40.500 200 95 9 11 188 2 199 2.15e-31 120
MsG0180006146.01.T01 MTR_5g008950 33.443 305 154 12 14 293 1 281 2.30e-31 120
MsG0180006146.01.T01 MTR_7g056287 34.448 299 141 14 12 277 3 279 3.51e-30 117
MsG0180006146.01.T01 MTR_2g008310 31.098 328 152 12 11 289 1 303 3.82e-30 117
MsG0180006146.01.T01 MTR_3g109982 40.291 206 102 7 12 204 13 210 8.87e-30 119
MsG0180006146.01.T01 MTR_3g114200 46.405 153 66 4 6 147 10 157 1.51e-29 110
MsG0180006146.01.T01 MTR_3g110010 40.291 206 102 7 12 204 13 210 1.69e-29 118
MsG0180006146.01.T01 MTR_5g061680 33.910 289 139 14 9 275 8 266 2.04e-29 114
MsG0180006146.01.T01 MTR_5g073420 31.058 293 162 13 8 275 7 284 2.11e-29 115
MsG0180006146.01.T01 MTR_4g134150 39.583 192 96 6 5 188 8 187 7.31e-29 110
MsG0180006146.01.T01 MTR_5g008920 33.110 299 149 14 10 277 10 288 9.77e-29 113
MsG0180006146.01.T01 MTR_7g007080 32.588 313 154 11 9 284 1 293 1.01e-28 113
MsG0180006146.01.T01 MTR_7g075820 33.225 307 158 11 10 277 4 302 1.02e-28 114
MsG0180006146.01.T01 MTR_2g008320 30.744 309 146 12 10 275 50 333 1.08e-28 114
MsG0180006146.01.T01 MTR_6g045333 33.775 302 155 11 11 277 60 351 1.20e-28 114
MsG0180006146.01.T01 MTR_1g108800 32.867 286 132 12 4 270 2 246 2.14e-28 112
MsG0180006146.01.T01 MTR_7g056277 34.247 292 141 13 12 272 259 530 2.48e-28 114
MsG0180006146.01.T01 MTR_3g107100 33.110 299 151 12 12 277 11 293 2.32e-27 110
MsG0180006146.01.T01 MTR_5g073370 32.441 299 162 14 12 282 5 291 4.91e-27 108
MsG0180006146.01.T01 MTR_5g083890 34.314 306 153 13 12 277 6 303 6.31e-27 110
MsG0180006146.01.T01 MTR_1g108820 31.290 310 158 10 4 275 2 294 6.77e-27 108
MsG0180006146.01.T01 MTR_1g108820 31.111 315 162 10 4 280 2 299 7.89e-27 108
MsG0180006146.01.T01 MTR_1089s0010 30.450 289 161 10 11 273 7 281 8.78e-27 108
MsG0180006146.01.T01 MTR_6g022500 31.818 308 156 13 11 282 100 389 9.95e-27 109
MsG0180006146.01.T01 MTR_3g099830 32.673 303 148 11 1 277 1 273 2.16e-26 107
MsG0180006146.01.T01 MTR_7g026500 36.481 233 121 11 2 215 4 228 2.85e-26 107
MsG0180006146.01.T01 MTR_6g040270 30.100 299 153 11 14 277 10 287 3.19e-26 106
MsG0180006146.01.T01 MTR_3g087260 37.321 209 102 8 1 201 1 188 6.51e-26 106
MsG0180006146.01.T01 MTR_3g087260 32.292 192 106 9 100 277 180 361 2.71e-13 70.1
MsG0180006146.01.T01 MTR_2g007450 31.385 325 153 14 11 277 15 327 8.07e-26 106
MsG0180006146.01.T01 MTR_2g020170 54.545 121 43 5 12 122 22 140 9.74e-26 99.8
MsG0180006146.01.T01 MTR_5g058100 33.333 303 142 16 10 273 7 288 1.16e-25 105
MsG0180006146.01.T01 MTR_7g007340 32.226 301 141 13 11 286 12 274 1.69e-25 104
MsG0180006146.01.T01 MTR_5g045510 30.909 275 154 8 1 247 1 267 2.28e-25 104
MsG0180006146.01.T01 MTR_6g011460 30.392 306 174 11 11 289 45 338 3.60e-25 104
MsG0180006146.01.T01 MTR_4g039440 31.987 297 156 13 11 275 33 315 4.33e-25 103
MsG0180006146.01.T01 MTR_7g007370 30.450 289 142 8 2 277 7 249 1.08e-24 102
MsG0180006146.01.T01 MTR_7g055943 31.126 302 154 13 10 275 38 321 1.22e-24 103
MsG0180006146.01.T01 MTR_7g081290 55.340 103 36 3 6 98 11 113 1.40e-24 99.8
MsG0180006146.01.T01 MTR_1g066830 29.801 302 162 12 8 273 4 291 1.76e-24 102
MsG0180006146.01.T01 MTR_7g060470 30.218 321 145 14 12 277 3 299 2.53e-24 101
MsG0180006146.01.T01 MTR_2g007400 30.284 317 173 11 1 280 1 306 2.97e-24 101
MsG0180006146.01.T01 MTR_3g071850 31.290 310 162 12 11 282 23 319 9.79e-24 101
MsG0180006146.01.T01 MTR_5g045170 30.421 309 168 10 2 277 4 298 1.56e-23 99.4
MsG0180006146.01.T01 MTR_7g098590 54.082 98 35 2 11 98 17 114 3.67e-23 92.8
MsG0180006146.01.T01 MTR_2g007500 32.895 304 143 13 10 277 12 290 4.01e-23 97.4
MsG0180006146.01.T01 MTR_5g058000 31.788 302 154 16 4 275 2 281 4.84e-23 97.8
MsG0180006146.01.T01 MTR_6g044572 28.797 316 157 11 11 280 1 294 5.57e-23 97.8
MsG0180006146.01.T01 MTR_5g073340 28.966 290 155 10 11 277 7 268 8.65e-23 96.3
MsG0180006146.01.T01 MTR_2g007360 30.769 312 147 11 1 282 1 273 9.40e-23 97.1
MsG0180006146.01.T01 MTR_3g095600 36.283 226 101 10 9 218 1 199 1.25e-22 95.5
MsG0180006146.01.T01 MTR_7g034090 41.509 159 63 4 9 149 1 147 1.45e-22 97.1
MsG0180006146.01.T01 MTR_1g107385 31.833 311 155 14 10 277 30 326 1.49e-22 97.1
MsG0180006146.01.T01 MTR_3g107120 33.010 309 148 12 12 277 9 301 1.63e-22 96.7
MsG0180006146.01.T01 MTR_5g007410 29.568 301 162 11 14 277 28 315 1.91e-22 97.1
MsG0180006146.01.T01 MTR_6g044560 28.391 317 159 10 10 280 176 470 2.05e-22 97.4
MsG0180006146.01.T01 MTR_0009s0080 30.794 315 171 11 14 294 20 321 2.68e-22 96.3
MsG0180006146.01.T01 MTR_7g083740 29.373 303 146 11 3 277 8 270 4.53e-22 95.1
MsG0180006146.01.T01 MTR_1g085120 30.392 306 155 16 12 277 179 466 5.46e-22 95.9
MsG0180006146.01.T01 MTR_1g085120 30.392 306 155 16 12 277 92 379 6.91e-22 95.5
MsG0180006146.01.T01 MTR_1g085120 30.392 306 155 16 12 277 167 454 1.01e-21 95.5
MsG0180006146.01.T01 MTR_3g107160 30.031 323 160 14 12 292 10 308 3.23e-21 92.8
MsG0180006146.01.T01 MTR_5g063950 31.438 299 159 11 17 296 13 284 5.67e-21 92.0
MsG0180006146.01.T01 MTR_5g031970 28.571 287 172 8 2 280 6 267 9.45e-21 91.3
MsG0180006146.01.T01 MTR_6g022360 30.241 291 157 12 11 275 42 312 1.13e-20 91.7
MsG0180006146.01.T01 MTR_1g053025 32.484 314 148 16 11 277 1 297 1.15e-20 91.3
MsG0180006146.01.T01 MTR_8g070950 38.220 191 99 10 12 189 15 199 1.32e-20 91.7
MsG0180006146.01.T01 MTR_1g095750 53.261 92 35 3 4 88 39 129 4.39e-20 84.7
MsG0180006146.01.T01 MTR_8g062080 33.163 196 110 8 10 189 21 211 9.20e-20 89.4
MsG0180006146.01.T01 MTR_8g058965 34.928 209 98 8 11 187 12 214 3.05e-19 87.8
MsG0180006146.01.T01 MTR_4g032730 32.701 211 100 9 10 190 13 211 4.10e-19 87.4
MsG0180006146.01.T01 MTR_5g039450 27.692 325 165 13 11 293 5 301 4.66e-19 86.7
MsG0180006146.01.T01 MTR_4g098590 29.677 310 167 12 14 285 1 297 7.79e-19 85.9
MsG0180006146.01.T01 MTR_8g467790 33.333 195 108 6 11 187 147 337 9.45e-19 86.7
MsG0180006146.01.T01 MTR_5g039490 32.468 231 121 7 10 216 18 237 1.90e-18 85.1
MsG0180006146.01.T01 MTR_1g492880 54.878 82 30 2 12 86 6 87 7.66e-18 77.4
MsG0180006146.01.T01 MTR_1g492880 54.878 82 30 2 12 86 6 87 7.74e-18 77.8
MsG0180006146.01.T01 MTR_3g113782 65.517 58 19 1 6 62 10 67 8.01e-18 77.0
MsG0180006146.01.T01 MTR_2g036470 28.115 313 179 8 10 288 12 312 9.29e-18 83.2
MsG0180006146.01.T01 MTR_8g062310 29.044 272 144 9 11 269 24 259 1.41e-17 82.8
MsG0180006146.01.T01 MTR_5g061410 30.345 290 153 11 10 277 3 265 1.42e-17 81.3
MsG0180006146.01.T01 MTR_8g467800 32.161 199 113 5 12 195 20 211 2.43e-17 81.3
MsG0180006146.01.T01 MTR_5g065100 29.043 303 175 9 6 296 2 276 4.87e-17 81.3
MsG0180006146.01.T01 MTR_8g467800 32.161 199 113 5 12 195 20 211 5.74e-17 81.3
MsG0180006146.01.T01 MTR_8g014160 35.149 202 100 9 12 188 41 236 6.76e-17 80.9
MsG0180006146.01.T01 MTR_3g026920 28.135 327 153 14 11 279 18 320 1.91e-16 79.3
MsG0180006146.01.T01 MTR_8g062010 32.995 197 95 10 12 185 9 191 3.14e-16 79.0
MsG0180006146.01.T01 MTR_5g013500 30.323 310 137 15 5 277 3 270 3.44e-16 78.2
MsG0180006146.01.T01 MTR_4g050930 31.373 204 106 7 12 189 29 224 1.10e-15 77.0
MsG0180006146.01.T01 MTR_8g469020 32.075 212 108 7 8 187 3 210 1.14e-15 77.4
MsG0180006146.01.T01 MTR_4g050930 31.373 204 106 7 12 189 29 224 1.15e-15 77.4
MsG0180006146.01.T01 MTR_6g022390 36.842 133 60 5 9 119 2 132 1.62e-15 72.8
MsG0180006146.01.T01 MTR_8g468810 32.500 200 108 8 12 190 25 218 2.95e-15 75.1
MsG0180006146.01.T01 MTR_5g087940 33.838 198 100 10 12 189 26 212 3.19e-15 75.9
MsG0180006146.01.T01 MTR_2g083840 30.846 201 117 7 9 190 18 215 3.30e-15 75.9
MsG0180006146.01.T01 MTR_8g468810 32.500 200 108 8 12 190 25 218 4.36e-15 74.7
MsG0180006146.01.T01 MTR_4g056030 30.537 298 163 14 12 279 9 292 4.51e-15 75.5
MsG0180006146.01.T01 MTR_8g468810 32.500 200 108 8 12 190 25 218 5.46e-15 74.7
MsG0180006146.01.T01 MTR_8g468810 32.500 200 108 8 12 190 25 218 6.76e-15 74.7
MsG0180006146.01.T01 MTR_8g468810 32.500 200 108 8 12 190 25 218 7.10e-15 75.1
MsG0180006146.01.T01 MTR_5g039470 29.078 282 158 13 29 278 2 273 9.50e-15 73.9
MsG0180006146.01.T01 MTR_4g050250 31.507 219 98 11 10 187 19 226 1.17e-14 74.3
MsG0180006146.01.T01 MTR_7g056020 30.640 297 157 14 6 277 8 280 1.53e-14 74.3
MsG0180006146.01.T01 MTR_4g093690 31.193 218 114 8 12 207 18 221 1.91e-14 72.4
MsG0180006146.01.T01 MTR_8g062270 29.756 205 113 7 10 189 14 212 2.73e-14 73.2
MsG0180006146.01.T01 MTR_3g099900 30.093 216 114 9 12 216 18 207 2.84e-14 72.8
MsG0180006146.01.T01 MTR_7g033470 47.561 82 34 2 6 78 8 89 6.09e-14 68.2
MsG0180006146.01.T01 MTR_8g077460 31.313 297 151 14 12 277 10 284 9.38e-14 71.2
MsG0180006146.01.T01 MTR_3g095640 34.783 161 77 6 10 150 16 168 1.15e-13 68.2
MsG0180006146.01.T01 MTR_4g051480 31.683 202 103 9 12 185 25 219 1.39e-13 71.6
MsG0180006146.01.T01 MTR_4g092300 32.178 202 102 9 12 185 25 219 1.45e-13 71.2
MsG0180006146.01.T01 MTR_5g084070 28.490 351 153 14 10 283 11 340 1.49e-13 70.9
MsG0180006146.01.T01 MTR_4g047950 29.609 179 109 7 12 179 13 185 2.40e-13 70.1
MsG0180006146.01.T01 MTR_4g056020 32.243 214 118 9 12 207 9 213 4.31e-13 69.7
MsG0180006146.01.T01 MTR_0571s0010 55.172 58 26 0 12 69 32 89 5.10e-13 64.7
MsG0180006146.01.T01 MTR_2g047858 29.798 198 115 5 12 192 115 305 5.29e-13 69.3
MsG0180006146.01.T01 MTR_8g058970 27.727 220 111 9 11 190 18 229 6.79e-13 68.9
MsG0180006146.01.T01 MTR_4g080610 28.077 260 122 11 14 262 14 219 1.12e-12 68.2
MsG0180006146.01.T01 MTR_2g103680 70.732 41 12 0 8 48 5 45 1.46e-12 63.9
MsG0180006146.01.T01 MTR_5g092960 28.708 209 108 7 11 190 18 214 1.47e-12 68.2
MsG0180006146.01.T01 MTR_4g092430 29.545 220 131 8 10 214 41 251 1.54e-12 67.8
MsG0180006146.01.T01 MTR_4g050940 28.019 207 114 7 12 190 67 266 1.56e-12 68.2
MsG0180006146.01.T01 MTR_5g082930 47.826 69 28 1 14 74 17 85 1.75e-12 65.5
MsG0180006146.01.T01 MTR_4g092430 29.545 220 131 8 10 214 41 251 1.82e-12 67.8
MsG0180006146.01.T01 MTR_5g092960 28.708 209 108 7 11 190 18 214 1.89e-12 67.4
MsG0180006146.01.T01 MTR_2g082800 42.574 101 46 3 12 101 27 126 2.62e-12 67.0
MsG0180006146.01.T01 MTR_2g007550 26.821 302 141 12 1 277 1 247 2.74e-12 66.6
MsG0180006146.01.T01 MTR_3g048290 28.365 208 121 6 11 199 22 220 3.10e-12 67.0
MsG0180006146.01.T01 MTR_8g468760 30.435 207 111 7 10 190 7 206 3.86e-12 66.6
MsG0180006146.01.T01 MTR_7g034065 57.143 70 20 3 1 65 1 65 5.27e-12 60.8
MsG0180006146.01.T01 MTR_1g077420 27.313 227 137 8 9 218 1 216 5.44e-12 65.1
MsG0180006146.01.T01 MTR_6g013160 53.623 69 30 1 11 79 8 74 5.78e-12 66.2
MsG0180006146.01.T01 MTR_3g023270 30.723 166 99 5 12 170 12 168 1.06e-11 65.1
MsG0180006146.01.T01 MTR_4g080773 29.808 208 110 8 12 191 19 218 1.47e-11 65.1
MsG0180006146.01.T01 MTR_2g007100 68.421 38 12 0 11 48 1 38 1.48e-11 59.7
MsG0180006146.01.T01 MTR_7g021630 30.612 196 103 9 12 186 17 200 1.49e-11 64.7
MsG0180006146.01.T01 MTR_7g021630 30.612 196 103 9 12 186 17 200 1.61e-11 64.7
MsG0180006146.01.T01 MTR_4g092360 28.571 175 104 6 12 172 50 217 1.66e-11 64.7
MsG0180006146.01.T01 MTR_8g445780 31.795 195 108 9 12 189 13 199 1.69e-11 64.7
MsG0180006146.01.T01 MTR_4g080773 29.808 208 110 8 12 191 19 218 1.69e-11 64.7
MsG0180006146.01.T01 MTR_8g014260 30.986 213 117 7 2 189 6 213 2.06e-11 64.7
MsG0180006146.01.T01 MTR_6g088705 28.837 215 129 6 10 208 17 223 2.28e-11 62.8
MsG0180006146.01.T01 MTR_6g088700 31.522 184 104 8 10 179 12 187 3.26e-11 63.9
MsG0180006146.01.T01 MTR_6g025160 26.222 225 130 7 4 220 93 289 3.53e-11 63.5
MsG0180006146.01.T01 MTR_5g080710 30.303 231 129 7 3 220 24 235 4.09e-11 63.5
MsG0180006146.01.T01 MTR_1g094760 30.978 184 102 7 12 179 26 200 4.62e-11 63.9
MsG0180006146.01.T01 MTR_6g018660 28.804 184 101 7 10 170 18 194 4.71e-11 63.2
MsG0180006146.01.T01 MTR_7g056280 28.910 211 125 6 14 208 8 209 6.14e-11 63.2
MsG0180006146.01.T01 MTR_5g021550 33.333 150 73 6 12 140 19 162 7.14e-11 60.1
MsG0180006146.01.T01 MTR_8g066650 29.775 178 108 5 12 179 80 250 7.46e-11 62.8
MsG0180006146.01.T01 MTR_3g023330 29.949 197 108 8 12 185 15 204 7.75e-11 62.4
MsG0180006146.01.T01 MTR_5g058350 32.044 181 98 6 11 189 7 164 8.50e-11 60.5
MsG0180006146.01.T01 MTR_4g092980 27.350 234 136 9 4 216 6 226 8.72e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006146.01.T01 AT5G41840 32.301 226 128 8 1 202 1 225 1.42e-21 95.1
MsG0180006146.01.T01 AT4G10400 33.862 189 110 6 11 189 1 184 6.42e-20 89.4
MsG0180006146.01.T01 AT4G10400 33.862 189 110 6 11 189 1 184 6.42e-20 89.4
MsG0180006146.01.T01 AT4G10400 33.862 189 110 6 11 189 1 184 6.42e-20 89.4
MsG0180006146.01.T01 AT4G00320 30.736 231 132 6 2 208 3 229 8.30e-20 89.7
MsG0180006146.01.T01 AT5G38590 33.158 190 108 6 11 189 1 182 9.52e-20 87.4
MsG0180006146.01.T01 AT5G38590 33.158 190 108 6 11 189 1 182 2.70e-19 87.8
MsG0180006146.01.T01 AT4G09920 33.690 187 109 6 11 187 1 182 3.37e-19 85.9
MsG0180006146.01.T01 AT4G09920 33.690 187 109 6 11 187 1 182 3.37e-19 85.9
MsG0180006146.01.T01 AT4G09920 33.690 187 109 6 11 187 1 182 3.37e-19 85.9
MsG0180006146.01.T01 AT1G32375 28.274 336 166 12 11 278 1 329 4.16e-19 87.4
MsG0180006146.01.T01 AT1G32375 28.274 336 166 12 11 278 1 329 4.16e-19 87.4
MsG0180006146.01.T01 AT4G09920 33.690 187 109 6 11 187 1 182 7.35e-19 85.5
MsG0180006146.01.T01 AT4G09920 33.690 187 109 6 11 187 1 182 7.35e-19 85.5
MsG0180006146.01.T01 AT5G41830 30.769 208 124 5 12 199 13 220 2.32e-18 85.5
MsG0180006146.01.T01 AT3G59200 30.961 281 147 10 9 265 4 261 2.50e-18 84.3
MsG0180006146.01.T01 AT5G56370 34.392 189 109 6 11 190 1 183 2.67e-18 84.0
MsG0180006146.01.T01 AT3G59200 30.961 281 147 10 9 265 4 261 3.20e-18 85.1
MsG0180006146.01.T01 AT5G56370 34.392 189 109 6 11 190 1 183 4.27e-18 84.3
MsG0180006146.01.T01 AT5G56370 34.392 189 109 6 11 190 1 183 4.27e-18 84.3
MsG0180006146.01.T01 AT3G59190 32.558 215 115 7 1 193 1 207 8.35e-18 83.2
MsG0180006146.01.T01 AT3G59190 32.558 215 115 7 1 193 1 207 1.09e-17 83.6
MsG0180006146.01.T01 AT3G58980 34.138 290 141 16 11 278 1 262 1.93e-17 82.8
MsG0180006146.01.T01 AT3G58920 36.232 207 99 10 11 192 1 199 2.21e-17 82.4
MsG0180006146.01.T01 AT4G00315 31.579 190 117 5 11 189 1 188 3.03e-17 82.0
MsG0180006146.01.T01 AT2G26030 31.980 197 100 10 9 186 1 182 4.35e-17 81.6
MsG0180006146.01.T01 AT2G26030 31.980 197 100 10 9 186 1 182 4.35e-17 81.6
MsG0180006146.01.T01 AT2G26030 31.980 197 100 10 9 186 1 182 4.43e-17 81.6
MsG0180006146.01.T01 AT5G41630 31.111 225 121 7 1 199 1 217 8.44e-17 80.5
MsG0180006146.01.T01 AT5G53640 30.481 187 111 6 12 189 22 198 1.36e-16 77.4
MsG0180006146.01.T01 AT5G22720 26.190 252 156 9 12 241 23 266 1.68e-16 79.7
MsG0180006146.01.T01 AT3G59240 35.961 203 97 10 12 192 8 199 1.86e-16 79.7
MsG0180006146.01.T01 AT4G15060 32.189 233 126 12 11 228 25 240 2.87e-16 79.0
MsG0180006146.01.T01 AT4G15060 32.189 233 126 12 11 228 171 386 3.90e-16 79.0
MsG0180006146.01.T01 AT4G14103 36.500 200 102 7 10 192 6 197 4.34e-16 78.6
MsG0180006146.01.T01 AT4G14103 36.500 200 102 7 10 192 6 197 4.93e-16 78.2
MsG0180006146.01.T01 AT4G14103 36.500 200 102 7 10 192 6 197 4.93e-16 78.2
MsG0180006146.01.T01 AT1G16930 33.333 189 107 7 12 189 15 195 5.32e-16 78.2
MsG0180006146.01.T01 AT1G16930 33.333 189 107 7 12 189 15 195 5.32e-16 78.2
MsG0180006146.01.T01 AT1G16930 33.333 189 107 7 12 189 15 195 5.32e-16 78.2
MsG0180006146.01.T01 AT1G58310 32.710 214 102 8 10 189 6 211 7.07e-16 78.2
MsG0180006146.01.T01 AT5G25850 32.292 192 103 8 11 189 19 196 1.10e-15 77.4
MsG0180006146.01.T01 AT3G49150 33.831 201 103 7 12 192 16 206 1.11e-15 77.4
MsG0180006146.01.T01 AT4G14096 35.500 200 98 9 12 192 8 195 1.73e-15 76.6
MsG0180006146.01.T01 AT4G14096 35.500 200 98 9 12 192 8 195 1.73e-15 76.6
MsG0180006146.01.T01 AT5G22670 32.020 203 112 9 1 190 1 190 1.84e-15 76.6
MsG0180006146.01.T01 AT3G58940 30.435 207 114 8 11 192 1 202 1.84e-15 77.0
MsG0180006146.01.T01 AT3G58940 30.435 207 114 8 11 192 1 202 1.84e-15 77.0
MsG0180006146.01.T01 AT2G26860 32.990 194 109 7 11 189 1 188 2.67e-15 75.9
MsG0180006146.01.T01 AT2G26860 32.990 194 109 7 11 189 1 188 2.67e-15 75.9
MsG0180006146.01.T01 AT5G56690 29.534 193 112 6 14 189 4 189 2.87e-15 75.9
MsG0180006146.01.T01 AT3G56780 33.333 186 105 8 14 189 9 185 2.99e-15 76.3
MsG0180006146.01.T01 AT5G60610 33.880 183 113 4 11 189 1 179 3.55e-15 75.5
MsG0180006146.01.T01 AT5G60610 33.880 183 113 4 11 189 1 179 3.55e-15 75.5
MsG0180006146.01.T01 AT3G56780 33.333 186 105 8 14 189 9 185 3.86e-15 75.5
MsG0180006146.01.T01 AT5G56420 34.211 190 105 8 12 189 6 187 4.32e-15 75.5
MsG0180006146.01.T01 AT5G56420 34.211 190 105 8 12 189 6 187 4.32e-15 75.5
MsG0180006146.01.T01 AT5G56420 34.211 190 105 8 12 189 6 187 4.32e-15 75.5
MsG0180006146.01.T01 AT4G00160 31.606 193 118 6 7 189 11 199 4.48e-15 75.5
MsG0180006146.01.T01 AT5G44940 29.373 303 158 16 12 277 5 288 4.74e-15 75.1
MsG0180006146.01.T01 AT5G27750 31.841 201 114 8 12 194 5 200 4.75e-15 75.1
MsG0180006146.01.T01 AT5G27750 31.841 201 114 8 12 194 5 200 4.90e-15 75.5
MsG0180006146.01.T01 AT3G56780 33.333 186 105 8 14 189 9 185 5.49e-15 75.1
MsG0180006146.01.T01 AT1G60400 31.500 200 121 6 2 190 4 198 1.44e-14 73.9
MsG0180006146.01.T01 AT1G55660 31.383 188 116 5 11 187 52 237 1.71e-14 73.6
MsG0180006146.01.T01 AT1G55660 29.688 192 114 5 11 187 52 237 1.82e-14 73.9
MsG0180006146.01.T01 AT3G44060 32.796 186 108 5 17 189 4 185 2.15e-14 73.6
MsG0180006146.01.T01 AT4G13965 29.474 190 117 5 9 189 7 188 2.16e-14 73.6
MsG0180006146.01.T01 AT5G56440 33.333 189 107 6 11 187 1 182 2.42e-14 73.2
MsG0180006146.01.T01 AT5G56380 32.308 195 111 4 11 189 1 190 3.27e-14 72.8
MsG0180006146.01.T01 AT5G56380 32.308 195 111 4 11 189 1 190 3.27e-14 72.8
MsG0180006146.01.T01 AT1G78750 33.168 202 101 11 11 189 17 207 3.78e-14 72.8
MsG0180006146.01.T01 AT1G78750 33.168 202 101 11 11 189 17 207 3.78e-14 72.8
MsG0180006146.01.T01 AT1G60410 33.684 190 109 8 12 189 10 194 4.71e-14 72.4
MsG0180006146.01.T01 AT1G64540 35.135 185 100 6 14 191 7 178 4.84e-14 72.4
MsG0180006146.01.T01 AT1G64540 35.135 185 100 6 14 191 7 178 4.84e-14 72.4
MsG0180006146.01.T01 AT3G59210 33.333 201 109 5 10 192 5 198 5.17e-14 72.4
MsG0180006146.01.T01 AT3G59210 33.333 201 109 5 10 192 5 198 5.17e-14 72.4
MsG0180006146.01.T01 AT3G59210 33.333 201 109 5 10 192 5 198 5.17e-14 72.4
MsG0180006146.01.T01 AT3G59210 33.333 201 109 5 10 192 5 198 5.17e-14 72.4
MsG0180006146.01.T01 AT3G59210 33.333 201 109 5 10 192 5 198 5.17e-14 72.4
MsG0180006146.01.T01 AT2G42720 34.000 200 107 8 11 191 1 194 8.84e-14 71.6
MsG0180006146.01.T01 AT4G26340 24.695 328 182 11 11 278 1 323 9.76e-14 71.6
MsG0180006146.01.T01 AT3G26922 29.947 187 116 6 12 189 14 194 1.03e-13 70.5
MsG0180006146.01.T01 AT3G26922 29.947 187 116 6 12 189 14 194 1.03e-13 70.5
MsG0180006146.01.T01 AT5G22700 30.890 191 115 6 12 193 6 188 1.08e-13 71.2
MsG0180006146.01.T01 AT5G22700 30.890 191 115 6 12 193 6 188 1.08e-13 71.2
MsG0180006146.01.T01 AT5G22700 30.890 191 115 6 12 193 6 188 1.08e-13 71.2
MsG0180006146.01.T01 AT5G22700 30.890 191 115 6 12 193 6 188 1.08e-13 71.2
MsG0180006146.01.T01 AT5G22700 30.890 191 115 6 12 193 43 225 1.28e-13 71.2
MsG0180006146.01.T01 AT5G22700 31.414 191 114 6 12 193 43 225 1.31e-13 71.2
MsG0180006146.01.T01 AT3G51530 35.052 194 109 8 2 187 20 204 1.32e-13 71.2
MsG0180006146.01.T01 AT5G38590 33.557 149 81 5 11 149 1 141 1.45e-13 70.1
MsG0180006146.01.T01 AT1G69630 32.124 193 108 9 11 189 17 200 1.73e-13 70.9
MsG0180006146.01.T01 AT1G13780 31.401 207 111 10 4 187 2 200 2.18e-13 70.1
MsG0180006146.01.T01 AT3G58880 32.039 206 104 9 11 192 2 195 2.20e-13 70.5
MsG0180006146.01.T01 AT4G27050 30.841 214 100 7 9 187 1 201 2.38e-13 70.5
MsG0180006146.01.T01 AT4G27050 30.841 214 100 7 9 187 1 201 2.38e-13 70.5
MsG0180006146.01.T01 AT4G27050 30.841 214 100 7 9 187 1 201 2.38e-13 70.5
MsG0180006146.01.T01 AT4G27050 30.841 214 100 7 9 187 1 201 2.38e-13 70.5
MsG0180006146.01.T01 AT4G27050 30.841 214 100 7 9 187 1 201 2.38e-13 70.5
MsG0180006146.01.T01 AT3G52680 32.124 193 112 6 9 189 18 203 2.61e-13 70.5
MsG0180006146.01.T01 AT1G13780 31.401 207 111 10 4 187 2 200 3.08e-13 70.1
MsG0180006146.01.T01 AT5G56410 31.731 208 108 11 11 189 1 203 3.40e-13 70.1
MsG0180006146.01.T01 AT3G52680 32.124 193 112 6 9 189 18 203 3.45e-13 69.7
MsG0180006146.01.T01 AT5G44950 32.143 196 109 10 9 190 1 186 3.71e-13 69.7
MsG0180006146.01.T01 AT3G50710 31.579 190 112 8 11 187 1 185 6.02e-13 68.9
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 8.86e-13 67.8
MsG0180006146.01.T01 AT3G59250 34.239 184 92 6 12 192 7 164 9.17e-13 68.6
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 9.39e-13 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 9.39e-13 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 21 285 1.13e-12 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 1.30e-12 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 1.30e-12 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 1.30e-12 68.2
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 1.30e-12 68.2
MsG0180006146.01.T01 AT1G78760 32.105 190 111 9 12 190 16 198 1.35e-12 68.2
MsG0180006146.01.T01 AT5G22660 31.217 189 109 6 12 189 13 191 1.40e-12 67.4
MsG0180006146.01.T01 AT5G22730 28.384 229 140 8 12 227 28 245 1.54e-12 67.8
MsG0180006146.01.T01 AT5G38392 30.918 207 110 8 11 192 1 199 1.58e-12 65.9
MsG0180006146.01.T01 AT1G48400 32.645 242 119 12 1 220 1 220 1.82e-12 67.8
MsG0180006146.01.T01 AT1G06630 29.553 291 152 14 12 275 12 276 2.03e-12 67.8
MsG0180006146.01.T01 AT5G22730 28.384 229 140 8 12 227 28 245 2.05e-12 67.8
MsG0180006146.01.T01 AT5G22730 28.384 229 140 8 12 227 28 245 2.05e-12 67.8
MsG0180006146.01.T01 AT1G48400 32.645 242 119 12 1 220 1 220 2.08e-12 67.8
MsG0180006146.01.T01 AT5G22660 31.217 189 109 6 12 189 13 191 2.23e-12 67.4
MsG0180006146.01.T01 AT5G35995 33.163 196 114 7 10 195 3 191 2.54e-12 67.4
MsG0180006146.01.T01 AT5G35995 33.163 196 114 7 10 195 3 191 2.54e-12 67.4
MsG0180006146.01.T01 AT3G58930 27.778 216 121 9 11 199 1 208 3.27e-12 67.0
MsG0180006146.01.T01 AT3G58930 27.778 216 121 9 11 199 1 208 3.27e-12 67.0
MsG0180006146.01.T01 AT3G58930 27.778 216 121 9 11 199 1 208 3.27e-12 67.0
MsG0180006146.01.T01 AT3G49040 32.487 197 101 10 12 189 17 200 3.28e-12 66.2
MsG0180006146.01.T01 AT2G04230 33.166 199 107 9 9 189 10 200 3.63e-12 67.0
MsG0180006146.01.T01 AT5G18780 32.258 186 113 6 12 190 11 190 4.72e-12 66.6
MsG0180006146.01.T01 AT5G18780 32.258 186 113 6 12 190 11 190 4.72e-12 66.6
MsG0180006146.01.T01 AT5G18780 32.258 186 113 6 12 190 11 190 4.80e-12 66.2
MsG0180006146.01.T01 AT5G18780 32.258 186 113 6 12 190 11 190 4.80e-12 66.2
MsG0180006146.01.T01 AT3G26922 29.444 180 101 5 12 189 14 169 5.25e-12 65.5
MsG0180006146.01.T01 AT1G80470 32.804 189 110 8 12 189 15 197 5.58e-12 66.2
MsG0180006146.01.T01 AT2G29930 31.472 197 116 7 1 187 1 188 5.59e-12 66.2
MsG0180006146.01.T01 AT2G29930 31.472 197 116 7 1 187 1 188 5.59e-12 66.2
MsG0180006146.01.T01 AT3G58960 32.812 192 110 9 11 189 1 186 6.63e-12 66.2
MsG0180006146.01.T01 AT4G13960 29.817 218 124 7 11 208 1 209 9.25e-12 65.5
MsG0180006146.01.T01 AT4G13960 29.817 218 124 7 11 208 1 209 9.25e-12 65.5
MsG0180006146.01.T01 AT5G02930 27.979 193 117 8 6 189 22 201 1.19e-11 65.5
MsG0180006146.01.T01 AT5G53840 32.105 190 105 7 12 189 18 195 1.29e-11 65.1
MsG0180006146.01.T01 AT5G38390 31.016 187 117 6 11 192 1 180 1.43e-11 65.1
MsG0180006146.01.T01 AT1G19070 46.429 84 36 2 11 86 1 83 1.52e-11 60.1
MsG0180006146.01.T01 AT5G44980 29.442 197 114 8 9 189 1 188 1.63e-11 64.3
MsG0180006146.01.T01 AT5G44980 29.442 197 114 8 9 189 1 188 1.63e-11 64.3
MsG0180006146.01.T01 AT2G29910 32.447 188 108 6 10 187 27 205 1.68e-11 64.7
MsG0180006146.01.T01 AT2G29910 32.447 188 108 6 10 187 3 181 1.72e-11 64.3
MsG0180006146.01.T01 AT2G29910 32.447 188 108 6 10 187 3 181 1.72e-11 64.3
MsG0180006146.01.T01 AT2G29910 32.447 188 108 6 10 187 3 181 1.72e-11 64.3
MsG0180006146.01.T01 AT2G29910 32.447 188 108 6 10 187 3 181 1.72e-11 64.3
MsG0180006146.01.T01 AT2G29910 33.333 189 105 7 10 187 3 181 1.75e-11 64.3
MsG0180006146.01.T01 AT2G29910 33.333 189 105 7 10 187 3 181 1.75e-11 64.3
MsG0180006146.01.T01 AT1G55030 30.769 182 114 6 12 187 19 194 2.00e-11 64.7
MsG0180006146.01.T01 AT3G58900 32.020 203 105 9 11 191 1 192 2.15e-11 63.9
MsG0180006146.01.T01 AT3G59150 38.384 99 48 2 2 87 3 101 2.21e-11 64.7
MsG0180006146.01.T01 AT5G44980 29.442 197 114 8 9 189 1 188 2.42e-11 64.3
MsG0180006146.01.T01 AT5G44980 29.442 197 114 8 9 189 1 188 2.42e-11 64.3
MsG0180006146.01.T01 AT3G58900 32.020 203 105 9 11 191 1 192 2.52e-11 63.9
MsG0180006146.01.T01 AT3G58900 32.020 203 105 9 11 191 1 192 2.52e-11 63.9
MsG0180006146.01.T01 AT1G55030 30.769 182 114 6 12 187 9 184 2.76e-11 63.9
MsG0180006146.01.T01 AT3G58900 30.952 210 112 9 11 198 1 199 3.17e-11 63.9
MsG0180006146.01.T01 AT3G59000 30.481 187 96 5 11 173 1 177 5.09e-11 63.5
MsG0180006146.01.T01 AT5G22610 26.238 202 136 5 12 202 18 217 5.29e-11 63.5
MsG0180006146.01.T01 AT3G03040 33.175 211 111 9 11 199 1 203 6.30e-11 63.2
MsG0180006146.01.T01 AT5G56560 31.937 191 104 7 13 189 6 184 6.91e-11 62.8
MsG0180006146.01.T01 AT5G44960 30.964 197 105 9 12 189 5 189 7.54e-11 62.8
MsG0180006146.01.T01 AT1G56610 31.959 194 106 9 16 192 14 198 8.83e-11 62.8

Find 65 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACAACATCCTCTCTTATT+AGG 0.242529 1:-100700425 None:intergenic
GTTTAAACGCTTATCTGATT+TGG 0.296831 1:+100700599 MsG0180006146.01.T01:CDS
TTCTATCAAGCAGTTCAAAT+TGG 0.330817 1:-100700845 None:intergenic
CCTTGTTGTTCTTAAGTTGA+AGG 0.338558 1:+100700398 MsG0180006146.01.T01:CDS
TGTAACTTCCGAAGAACATT+AGG 0.348350 1:+100700342 MsG0180006146.01.T01:CDS
TGATAGACCTACGTGTTCTA+AGG 0.356648 1:+100701886 MsG0180006146.01.T01:intron
AGAGAGGATGTGACAGATAA+TGG 0.358197 1:-100700049 None:intergenic
GGTCTATGCAACTAAGTTTA+CGG 0.378033 1:+100701907 MsG0180006146.01.T01:three_prime_UTR
GCTTGTAGCAGCAGATGTTT+TGG 0.378383 1:-100700082 None:intergenic
AGGGTAAGATTCTCAAGCTT+TGG 0.380183 1:-100700883 None:intergenic
GGACAGAATCAGCGATTTAC+CGG 0.384478 1:+100700023 MsG0180006146.01.T01:CDS
GGCTTATCTTTGCGTCCAAT+TGG 0.387906 1:+100700818 MsG0180006146.01.T01:CDS
ATCATTCCGCCTCAAATGTC+GGG 0.398987 1:+100700230 MsG0180006146.01.T01:CDS
AAAATACAATGTTGTTCAAA+TGG 0.399651 1:-100700479 None:intergenic
CAAATTACTGATTTATTACT+CGG 0.416691 1:+100700552 MsG0180006146.01.T01:CDS
GTTCAAATTGGTATGCCAAT+TGG 0.418748 1:-100700833 None:intergenic
AACTTAACTCACCTCGAGCT+TGG 0.445621 1:+100700796 MsG0180006146.01.T01:CDS
CCACAATGGATTCCATCTCT+TGG 0.447767 1:-100700112 None:intergenic
ACTTAACTCACCTCGAGCTT+GGG 0.449004 1:+100700797 MsG0180006146.01.T01:CDS
GCAGAGAGGAAGCCGATTGT+TGG 0.452373 1:+100700644 MsG0180006146.01.T01:CDS
GACATTTGAGGCGGAATGAT+CGG 0.459321 1:-100700227 None:intergenic
CAAGCATTCTTTCCAAGAGA+TGG 0.468499 1:+100700100 MsG0180006146.01.T01:CDS
TGTAAAGTCGAGAGCGAGAA+CGG 0.472644 1:-100700139 None:intergenic
GAACAGAAAGGGGTAGTGAC+TGG 0.479074 1:+100701944 MsG0180006146.01.T01:three_prime_UTR
CTGATTCTGTCCACGGACAT+TGG 0.481418 1:-100700012 None:intergenic
CAGTTTGATGGACATGGAGT+TGG 0.489097 1:+100701008 MsG0180006146.01.T01:intron
ATTTGCAAATCATCTACAAC+GGG 0.489814 1:-100700534 None:intergenic
TTACTCGGCTCAACTAATGA+AGG 0.495047 1:+100700567 MsG0180006146.01.T01:CDS
GTGTAGGACCTAATGTTCTT+CGG 0.495113 1:-100700350 None:intergenic
GATCATTCCGCCTCAAATGT+CGG 0.499563 1:+100700229 MsG0180006146.01.T01:CDS
ATTGTTGGACGGAGGGTTTG+AGG 0.502868 1:+100700659 MsG0180006146.01.T01:CDS
TTCGTGTTGCTGAGCGACGA+GGG 0.507813 1:+100700283 MsG0180006146.01.T01:CDS
ATTCGCAATCCCGACATTTG+AGG 0.526422 1:-100700239 None:intergenic
AATGATCGGATGTGCAAGGT+GGG 0.531818 1:-100700213 None:intergenic
GGGATGTGAATGAACAGAAA+GGG 0.534555 1:+100701933 MsG0180006146.01.T01:three_prime_UTR
TGCAACTAAGTTTACGGCAT+GGG 0.537910 1:+100701913 MsG0180006146.01.T01:three_prime_UTR
TTGAAAACAGTTTCAAGTGT+AGG 0.549868 1:-100700366 None:intergenic
GGCTCAACTAATGAAGGTAA+TGG 0.552118 1:+100700573 MsG0180006146.01.T01:CDS
CAAACCCTCCGTCCAACAAT+CGG 0.555689 1:-100700656 None:intergenic
TTGAGAATCTTACCCTCATG+AGG 0.559220 1:+100700890 MsG0180006146.01.T01:CDS
TTTCGTGTTGCTGAGCGACG+AGG 0.560613 1:+100700282 MsG0180006146.01.T01:CDS
ATGTGACAGATAATGGCGTC+CGG 0.564009 1:-100700042 None:intergenic
TGGGATGTGAATGAACAGAA+AGG 0.567768 1:+100701932 MsG0180006146.01.T01:three_prime_UTR
AACAGAAAGGGGTAGTGACT+GGG 0.569383 1:+100701945 MsG0180006146.01.T01:three_prime_UTR
GAAGCCGATTGTTGGACGGA+GGG 0.589913 1:+100700652 MsG0180006146.01.T01:CDS
GAATGATCGGATGTGCAAGG+TGG 0.592213 1:-100700214 None:intergenic
CCTTCAACTTAAGAACAACA+AGG 0.597875 1:-100700398 None:intergenic
CGCAATCCCGACATTTGAGG+CGG 0.603491 1:-100700236 None:intergenic
GCGAGAACGGAGAGCCACAA+TGG 0.605200 1:-100700126 None:intergenic
CCAAGAGATGGAATCCATTG+TGG 0.605746 1:+100700112 MsG0180006146.01.T01:CDS
AGAGGAAGCCGATTGTTGGA+CGG 0.612593 1:+100700648 MsG0180006146.01.T01:CDS
GGAAGCCGATTGTTGGACGG+AGG 0.615151 1:+100700651 MsG0180006146.01.T01:CDS
ATGCAACTAAGTTTACGGCA+TGG 0.617045 1:+100701912 MsG0180006146.01.T01:three_prime_UTR
TAAATCGCTGATTCTGTCCA+CGG 0.623968 1:-100700019 None:intergenic
CAAAGATAAGCCCAAGCTCG+AGG 0.635434 1:-100700807 None:intergenic
GAAGGCAATCCTAATAAGAG+AGG 0.635902 1:+100700416 MsG0180006146.01.T01:CDS
GGATGTGAATGAACAGAAAG+GGG 0.639225 1:+100701934 MsG0180006146.01.T01:three_prime_UTR
AATTTGCAAATCATCTACAA+CGG 0.647455 1:-100700535 None:intergenic
AGAAGCGGAAAATGAAACTG+AGG 0.649999 1:-100700447 None:intergenic
GGGGTCACGCGTGAGCATGA+CGG 0.672665 1:-100700193 None:intergenic
GCGTTCGATTCCAATGTCCG+TGG 0.679072 1:+100700002 MsG0180006146.01.T01:CDS
GCGGAATGATCGGATGTGCA+AGG 0.683599 1:-100700217 None:intergenic
ATGATCGGATGTGCAAGGTG+GGG 0.693806 1:-100700212 None:intergenic
AATGTTTCGAATTTGCAGAG+AGG 0.723420 1:+100700630 MsG0180006146.01.T01:CDS
GCATAGACCTTAGAACACGT+AGG 0.793466 1:-100701893 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATAACATAAATAAATT+AGG - Chr1:100700987-100701006 None:intergenic 10.0%
!! ATCAAAAAGACTATAAAATT+GGG - Chr1:100701870-100701889 None:intergenic 15.0%
!! TATCAAAAAGACTATAAAAT+TGG - Chr1:100701871-100701890 None:intergenic 15.0%
!! AAAATACAATGTTGTTCAAA+TGG - Chr1:100700482-100700501 None:intergenic 20.0%
!! ATTAATGACATACTATTTAC+TGG + Chr1:100701770-100701789 MsG0180006146.01.T01:intron 20.0%
!! GTTTCACTAATTTGAAAATT+GGG + Chr1:100701649-100701668 MsG0180006146.01.T01:intron 20.0%
!! TGTTTCACTAATTTGAAAAT+TGG + Chr1:100701648-100701667 MsG0180006146.01.T01:intron 20.0%
!! TTAATGACATACTATTTACT+GGG + Chr1:100701771-100701790 MsG0180006146.01.T01:intron 20.0%
!!! CAAATTACTGATTTATTACT+CGG + Chr1:100700552-100700571 MsG0180006146.01.T01:CDS 20.0%
!!! TTGAACAACATTGTATTTTT+TGG + Chr1:100700483-100700502 MsG0180006146.01.T01:CDS 20.0%
!!! TTTCGCATTCTTTAAAATAT+AGG - Chr1:100701150-100701169 None:intergenic 20.0%
! AAAAGCCAATATAAGAAGTA+AGG - Chr1:100701824-100701843 None:intergenic 25.0%
! AAAGAAAGTTGAAGATTGTT+TGG + Chr1:100701733-100701752 MsG0180006146.01.T01:intron 25.0%
! AATGAGTTAAACAATCAAGA+TGG - Chr1:100701686-100701705 None:intergenic 25.0%
! AATTTGCAAATCATCTACAA+CGG - Chr1:100700538-100700557 None:intergenic 25.0%
! ACAAATAAAATTCGACATGT+AGG - Chr1:100701266-100701285 None:intergenic 25.0%
! ACTTATATTTCACAAAGGTT+GGG - Chr1:100701489-100701508 None:intergenic 25.0%
! CAAAAAACCACAAAATGTAT+TGG + Chr1:100701043-100701062 MsG0180006146.01.T01:CDS 25.0%
! CTCATACTTATATTTCACAA+AGG - Chr1:100701494-100701513 None:intergenic 25.0%
! TAAGACCTTACTTCTTATAT+TGG + Chr1:100701816-100701835 MsG0180006146.01.T01:intron 25.0%
! TACTTATATTTCACAAAGGT+TGG - Chr1:100701490-100701509 None:intergenic 25.0%
! TATGAGAATCAAGTTTAGTA+CGG + Chr1:100701508-100701527 MsG0180006146.01.T01:intron 25.0%
! TGTATAATTATGTGAGTAAG+TGG + Chr1:100701844-100701863 MsG0180006146.01.T01:intron 25.0%
! TTAAAAACATGCACTCTTAT+AGG + Chr1:100701089-100701108 MsG0180006146.01.T01:intron 25.0%
!!! ATGTCGAATTTTATTTGTTG+AGG + Chr1:100701268-100701287 MsG0180006146.01.T01:intron 25.0%
!!! ATGTTATTTTGTCAGTTTGA+TGG + Chr1:100700996-100701015 MsG0180006146.01.T01:intron 25.0%
!!! GATTTTAATAAGCTTATCGA+GGG + Chr1:100700507-100700526 MsG0180006146.01.T01:CDS 25.0%
ACATTAGTAAAAACCTCATG+AGG - Chr1:100700906-100700925 None:intergenic 30.0%
ATGAATTCCTTTGACAATGA+TGG + Chr1:100701618-100701637 MsG0180006146.01.T01:intron 30.0%
ATTTGCAAATCATCTACAAC+GGG - Chr1:100700537-100700556 None:intergenic 30.0%
CATTAGTAAAAACCTCATGA+GGG - Chr1:100700905-100700924 None:intergenic 30.0%
GTCAAAGGAATTCATTCAAT+TGG - Chr1:100701613-100701632 None:intergenic 30.0%
GTTTAAACGCTTATCTGATT+TGG + Chr1:100700599-100700618 MsG0180006146.01.T01:CDS 30.0%
TGCACTCTTATAGGTTATAA+AGG + Chr1:100701098-100701117 MsG0180006146.01.T01:intron 30.0%
TTCTATCAAGCAGTTCAAAT+TGG - Chr1:100700848-100700867 None:intergenic 30.0%
! TTGAAAACAGTTTCAAGTGT+AGG - Chr1:100700369-100700388 None:intergenic 30.0%
!! AGTGCATGTTTTTAATTGAG+AGG - Chr1:100701084-100701103 None:intergenic 30.0%
!! CGAATTTTATTTGTTGAGGA+AGG + Chr1:100701272-100701291 MsG0180006146.01.T01:intron 30.0%
!! CGATTTTAATAAGCTTATCG+AGG + Chr1:100700506-100700525 MsG0180006146.01.T01:CDS 30.0%
AAACCAACCATCATTGTCAA+AGG - Chr1:100701628-100701647 None:intergenic 35.0%
AATGTTTCGAATTTGCAGAG+AGG + Chr1:100700630-100700649 MsG0180006146.01.T01:CDS 35.0%
AATTGAGAGGAAAGACATTC+CGG - Chr1:100701071-100701090 None:intergenic 35.0%
ACTAGCAAGTAGAAACTAGT+AGG - Chr1:100701327-100701346 None:intergenic 35.0%
ATTCCTTTGACAATGATGGT+TGG + Chr1:100701622-100701641 MsG0180006146.01.T01:intron 35.0%
CACAAGGGGATTTAAACATA+AGG + Chr1:100701198-100701217 MsG0180006146.01.T01:intron 35.0%
CCTTCAACTTAAGAACAACA+AGG - Chr1:100700401-100700420 None:intergenic 35.0%
GAACAACATCCTCTCTTATT+AGG - Chr1:100700428-100700447 None:intergenic 35.0%
GGTCTATGCAACTAAGTTTA+CGG + Chr1:100701907-100701926 MsG0180006146.01.T01:three_prime_UTR 35.0%
GTTCAAATTGGTATGCCAAT+TGG - Chr1:100700836-100700855 None:intergenic 35.0%
TATATTTCACAAAGGTTGGG+AGG - Chr1:100701486-100701505 None:intergenic 35.0%
TATGTTTAAATCCCCTTGTG+AGG - Chr1:100701198-100701217 None:intergenic 35.0%
TGTAACTTCCGAAGAACATT+AGG + Chr1:100700342-100700361 MsG0180006146.01.T01:CDS 35.0%
! TATTTGTTGAGGAAGGTTAG+TGG + Chr1:100701279-100701298 MsG0180006146.01.T01:intron 35.0%
!! ACCACAAAATGTATTGGTTC+CGG + Chr1:100701049-100701068 MsG0180006146.01.T01:intron 35.0%
!! CCTTGTTGTTCTTAAGTTGA+AGG + Chr1:100700398-100700417 MsG0180006146.01.T01:CDS 35.0%
!! TTTTGGTTGGAAGAAAAGAG+AGG - Chr1:100700068-100700087 None:intergenic 35.0%
!! TTTTGTCAGTTTGATGGACA+TGG + Chr1:100701002-100701021 MsG0180006146.01.T01:intron 35.0%
!!! AAATGGAGAGTTTTGAGAAG+CGG - Chr1:100700465-100700484 None:intergenic 35.0%
AAACTCTGATGCGACTATTG+TGG + Chr1:100701225-100701244 MsG0180006146.01.T01:intron 40.0%
AAGTAGAAACTAGTAGGTGG+TGG - Chr1:100701321-100701340 None:intergenic 40.0%
ACAATAGTCGCATCAGAGTT+TGG - Chr1:100701226-100701245 None:intergenic 40.0%
AGAAGCGGAAAATGAAACTG+AGG - Chr1:100700450-100700469 None:intergenic 40.0%
AGAGAGGATGTGACAGATAA+TGG - Chr1:100700052-100700071 None:intergenic 40.0%
AGCAAGTAGAAACTAGTAGG+TGG - Chr1:100701324-100701343 None:intergenic 40.0%
AGGGTAAGATTCTCAAGCTT+TGG - Chr1:100700886-100700905 None:intergenic 40.0%
ATGCAACTAAGTTTACGGCA+TGG + Chr1:100701912-100701931 MsG0180006146.01.T01:three_prime_UTR 40.0%
CAAGCATTCTTTCCAAGAGA+TGG + Chr1:100700100-100700119 MsG0180006146.01.T01:CDS 40.0%
GAAGGCAATCCTAATAAGAG+AGG + Chr1:100700416-100700435 MsG0180006146.01.T01:CDS 40.0%
GGATGTGAATGAACAGAAAG+GGG + Chr1:100701934-100701953 MsG0180006146.01.T01:three_prime_UTR 40.0%
GGCTCAACTAATGAAGGTAA+TGG + Chr1:100700573-100700592 MsG0180006146.01.T01:CDS 40.0%
GGGATGTGAATGAACAGAAA+GGG + Chr1:100701933-100701952 MsG0180006146.01.T01:three_prime_UTR 40.0%
GTGTAGGACCTAATGTTCTT+CGG - Chr1:100700353-100700372 None:intergenic 40.0%
TGACGATTAAAGCCTCACAA+GGG + Chr1:100701183-100701202 MsG0180006146.01.T01:intron 40.0%
TGATAGACCTACGTGTTCTA+AGG + Chr1:100701886-100701905 MsG0180006146.01.T01:intron 40.0%
TGCAACTAAGTTTACGGCAT+GGG + Chr1:100701913-100701932 MsG0180006146.01.T01:three_prime_UTR 40.0%
TGGGATGTGAATGAACAGAA+AGG + Chr1:100701932-100701951 MsG0180006146.01.T01:three_prime_UTR 40.0%
TTACTCGGCTCAACTAATGA+AGG + Chr1:100700567-100700586 MsG0180006146.01.T01:CDS 40.0%
TTGAGAATCTTACCCTCATG+AGG + Chr1:100700890-100700909 MsG0180006146.01.T01:CDS 40.0%
! AAGTTTAGTACGGCTCTAAC+TGG + Chr1:100701518-100701537 MsG0180006146.01.T01:intron 40.0%
! AGGTTAGTGGATGTCTACTT+TGG + Chr1:100701292-100701311 MsG0180006146.01.T01:intron 40.0%
! TCCGGAACCAATACATTTTG+TGG - Chr1:100701053-100701072 None:intergenic 40.0%
!! TAAATCGCTGATTCTGTCCA+CGG - Chr1:100700022-100700041 None:intergenic 40.0%
AACAGAAAGGGGTAGTGACT+GGG + Chr1:100701945-100701964 MsG0180006146.01.T01:three_prime_UTR 45.0%
AACTTAACTCACCTCGAGCT+TGG + Chr1:100700796-100700815 MsG0180006146.01.T01:CDS 45.0%
AATGATCGGATGTGCAAGGT+GGG - Chr1:100700216-100700235 None:intergenic 45.0%
ACTTAACTCACCTCGAGCTT+GGG + Chr1:100700797-100700816 MsG0180006146.01.T01:CDS 45.0%
ATCATTCCGCCTCAAATGTC+GGG + Chr1:100700230-100700249 MsG0180006146.01.T01:CDS 45.0%
ATTCGCAATCCCGACATTTG+AGG - Chr1:100700242-100700261 None:intergenic 45.0%
CCAAGAGATGGAATCCATTG+TGG + Chr1:100700112-100700131 MsG0180006146.01.T01:CDS 45.0%
GACGATTAAAGCCTCACAAG+GGG + Chr1:100701184-100701203 MsG0180006146.01.T01:intron 45.0%
GATCATTCCGCCTCAAATGT+CGG + Chr1:100700229-100700248 MsG0180006146.01.T01:CDS 45.0%
GCATAGACCTTAGAACACGT+AGG - Chr1:100701896-100701915 None:intergenic 45.0%
GGACAGAATCAGCGATTTAC+CGG + Chr1:100700023-100700042 MsG0180006146.01.T01:CDS 45.0%
GGCTTATCTTTGCGTCCAAT+TGG + Chr1:100700818-100700837 MsG0180006146.01.T01:CDS 45.0%
GTGACGATTAAAGCCTCACA+AGG + Chr1:100701182-100701201 MsG0180006146.01.T01:intron 45.0%
TGTAAAGTCGAGAGCGAGAA+CGG - Chr1:100700142-100700161 None:intergenic 45.0%
! ATGTGACAGATAATGGCGTC+CGG - Chr1:100700045-100700064 None:intergenic 45.0%
! CAGTTTGATGGACATGGAGT+TGG + Chr1:100701008-100701027 MsG0180006146.01.T01:intron 45.0%
! CCACAATGGATTCCATCTCT+TGG - Chr1:100700115-100700134 None:intergenic 45.0%
! GACATTTGAGGCGGAATGAT+CGG - Chr1:100700230-100700249 None:intergenic 45.0%
! GCTTGTAGCAGCAGATGTTT+TGG - Chr1:100700085-100700104 None:intergenic 45.0%
! GTTATAAAGGCACGTACGCT+GGG + Chr1:100701111-100701130 MsG0180006146.01.T01:intron 45.0%
!!! GTAGCAGCAGATGTTTTGGT+TGG - Chr1:100700081-100700100 None:intergenic 45.0%
!! TAAATTAAATCTAATTTATT+AGG + Chr1:100701416-100701435 MsG0180006146.01.T01:intron 5.0%
AGAGGAAGCCGATTGTTGGA+CGG + Chr1:100700648-100700667 MsG0180006146.01.T01:CDS 50.0%
ATGATCGGATGTGCAAGGTG+GGG - Chr1:100700215-100700234 None:intergenic 50.0%
ATTGTTGGACGGAGGGTTTG+AGG + Chr1:100700659-100700678 MsG0180006146.01.T01:CDS 50.0%
CAAACCCTCCGTCCAACAAT+CGG - Chr1:100700659-100700678 None:intergenic 50.0%
CAAAGATAAGCCCAAGCTCG+AGG - Chr1:100700810-100700829 None:intergenic 50.0%
CTGATTCTGTCCACGGACAT+TGG - Chr1:100700015-100700034 None:intergenic 50.0%
GAACAGAAAGGGGTAGTGAC+TGG + Chr1:100701944-100701963 MsG0180006146.01.T01:three_prime_UTR 50.0%
GAATGATCGGATGTGCAAGG+TGG - Chr1:100700217-100700236 None:intergenic 50.0%
! GGTTATAAAGGCACGTACGC+TGG + Chr1:100701110-100701129 MsG0180006146.01.T01:intron 50.0%
CACAAAGGTTGGGAGGAGCT+AGG - Chr1:100701479-100701498 None:intergenic 55.0%
CGCAATCCCGACATTTGAGG+CGG - Chr1:100700239-100700258 None:intergenic 55.0%
GAAGCCGATTGTTGGACGGA+GGG + Chr1:100700652-100700671 MsG0180006146.01.T01:CDS 55.0%
GCAGAGAGGAAGCCGATTGT+TGG + Chr1:100700644-100700663 MsG0180006146.01.T01:CDS 55.0%
GCGGAATGATCGGATGTGCA+AGG - Chr1:100700220-100700239 None:intergenic 55.0%
GCGTTCGATTCCAATGTCCG+TGG + Chr1:100700002-100700021 MsG0180006146.01.T01:CDS 55.0%
! CGACATGTAGGAGCGCATCT+TGG - Chr1:100701254-100701273 None:intergenic 55.0%
! TTCGTGTTGCTGAGCGACGA+GGG + Chr1:100700283-100700302 MsG0180006146.01.T01:CDS 55.0%
! TTTCGTGTTGCTGAGCGACG+AGG + Chr1:100700282-100700301 MsG0180006146.01.T01:CDS 55.0%
GCGAGAACGGAGAGCCACAA+TGG - Chr1:100700129-100700148 None:intergenic 60.0%
GGAAGCCGATTGTTGGACGG+AGG + Chr1:100700651-100700670 MsG0180006146.01.T01:CDS 60.0%
GGGGTCACGCGTGAGCATGA+CGG - Chr1:100700196-100700215 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 100699991 100701973 100699991 ID=MsG0180006146.01;Name=MsG0180006146.01
Chr1 mRNA 100699991 100701973 100699991 ID=MsG0180006146.01.T01;Parent=MsG0180006146.01;Name=MsG0180006146.01.T01;_AED=0.38;_eAED=0.43;_QI=0|0.66|0.25|1|1|1|4|81|296
Chr1 exon 100699991 100700680 100699991 ID=MsG0180006146.01.T01:exon:2024;Parent=MsG0180006146.01.T01
Chr1 exon 100700766 100700911 100700766 ID=MsG0180006146.01.T01:exon:2025;Parent=MsG0180006146.01.T01
Chr1 exon 100701011 100701064 100701011 ID=MsG0180006146.01.T01:exon:2026;Parent=MsG0180006146.01.T01
Chr1 exon 100701892 100701973 100701892 ID=MsG0180006146.01.T01:exon:2027;Parent=MsG0180006146.01.T01
Chr1 CDS 100699991 100700680 100699991 ID=MsG0180006146.01.T01:cds;Parent=MsG0180006146.01.T01
Chr1 CDS 100700766 100700911 100700766 ID=MsG0180006146.01.T01:cds;Parent=MsG0180006146.01.T01
Chr1 CDS 100701011 100701064 100701011 ID=MsG0180006146.01.T01:cds;Parent=MsG0180006146.01.T01
Chr1 CDS 100701892 100701892 100701892 ID=MsG0180006146.01.T01:cds;Parent=MsG0180006146.01.T01
Chr1 three_prime_UTR 100701893 100701973 100701893 ID=MsG0180006146.01.T01:three_prime_utr;Parent=MsG0180006146.01.T01
Gene Sequence

>MsG0180006146.01.T01

ATGTCTTCTGAGCGTTCGATTCCAATGTCCGTGGACAGAATCAGCGATTTACCGGACGCCATTATCTGTCACATCCTCTCTTTTCTTCCAACCAAAACATCTGCTGCTACAAGCATTCTTTCCAAGAGATGGAATCCATTGTGGCTCTCCGTTCTCGCTCTCGACTTTACAGACTTCTCGCTTTTTCGACATTTTATCAACTCCGTCATGCTCACGCGTGACCCCACCTTGCACATCCGATCATTCCGCCTCAAATGTCGGGATTGCGAATCTCATGTTATCAATCAATTTTTTCGTGTTGCTGAGCGACGAGGGTTTGAGAGTCTCGTCTTAGACTTGTCTAACAATTCTTGTAACTTCCGAAGAACATTAGGTCCTACACTTGAAACTGTTTTCAATTGTAGAAACCTTGTTGTTCTTAAGTTGAAGGCAATCCTAATAAGAGAGGATGTTGTTCCTCAGTTTCATTTTCCGCTTCTCAAAACTCTCCATTTGAACAACATTGTATTTTTTGGCGATTTTAATAAGCTTATCGAGGGTTGTCCCGTTGTAGATGATTTGCAAATTACTGATTTATTACTCGGCTCAACTAATGAAGGTAATGGAGAGTTTAAACGCTTATCTGATTTGGTCAAAGTTAATGTTTCGAATTTGCAGAGAGGAAGCCGATTGTTGGACGGAGGGTTTGAGATGCACAAGCAACAATGTCACACTTTTCGTAACTTAACTCACCTCGAGCTTGGGCTTATCTTTGCGTCCAATTGGCATACCAATTTGAACTGCTTGATAGAAGTGCTACGAGATTGTCCAAAGCTTGAGAATCTTACCCTCATGAGTTTGATGGACATGGAGTTGGTGACGACATGTGCAAAAAACCACAAAATGTATTGA

Protein sequence

>MsG0180006146.01.T01

MSSERSIPMSVDRISDLPDAIICHILSFLPTKTSAATSILSKRWNPLWLSVLALDFTDFSLFRHFINSVMLTRDPTLHIRSFRLKCRDCESHVINQFFRVAERRGFESLVLDLSNNSCNFRRTLGPTLETVFNCRNLVVLKLKAILIREDVVPQFHFPLLKTLHLNNIVFFGDFNKLIEGCPVVDDLQITDLLLGSTNEGNGEFKRLSDLVKVNVSNLQRGSRLLDGGFEMHKQQCHTFRNLTHLELGLIFASNWHTNLNCLIEVLRDCPKLENLTLMSLMDMELVTTCAKNHKMY*