AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037542.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037542.01.T01 MTR_7g033990 80.656 305 52 5 1 301 74 375 1.42e-162 459
MsG0780037542.01.T01 MTR_7g033915 72.990 311 63 4 1 309 74 365 9.78e-162 455
MsG0780037542.01.T01 MTR_7g034120 57.143 315 120 7 1 308 1 307 2.20e-114 333
MsG0780037542.01.T01 MTR_1g041245 49.844 321 139 8 1 308 74 385 7.47e-90 273
MsG0780037542.01.T01 MTR_7g034115 47.910 311 143 7 1 301 74 375 2.14e-85 261
MsG0780037542.01.T01 MTR_5g012840 46.154 312 118 6 1 308 52 317 8.46e-78 240
MsG0780037542.01.T01 MTR_7g032380 43.648 307 130 9 10 308 84 355 1.93e-76 238
MsG0780037542.01.T01 MTR_7g032370 41.509 318 151 8 4 308 56 351 1.15e-69 220
MsG0780037542.01.T01 MTR_7g056433 42.508 327 156 11 1 308 75 388 1.07e-65 211
MsG0780037542.01.T01 MTR_7g115270 40.061 327 173 10 1 306 75 399 2.75e-63 205
MsG0780037542.01.T01 MTR_0543s0010 41.905 315 158 11 4 309 152 450 3.83e-63 206
MsG0780037542.01.T01 MTR_7g098510 41.104 326 158 13 1 308 81 390 9.59e-62 201
MsG0780037542.01.T01 MTR_5g013500 41.641 329 149 13 1 308 58 364 1.49e-60 197
MsG0780037542.01.T01 MTR_7g034110 42.904 303 125 5 1 299 74 332 2.18e-60 196
MsG0780037542.01.T01 MTR_7g088260 39.877 326 160 12 1 308 154 461 6.24e-59 196
MsG0780037542.01.T01 MTR_3g108560 38.941 321 170 10 1 309 83 389 2.61e-57 189
MsG0780037542.01.T01 MTR_0492s0020 40.728 302 154 11 4 296 152 437 6.80e-56 187
MsG0780037542.01.T01 MTR_3g108150 39.571 326 162 12 3 309 78 387 3.85e-55 184
MsG0780037542.01.T01 MTR_7g098570 39.009 323 161 12 1 304 83 388 7.34e-53 180
MsG0780037542.01.T01 MTR_7g098480 39.198 324 161 14 4 309 84 389 1.04e-52 179
MsG0780037542.01.T01 MTR_3g087260 41.892 296 126 13 38 309 184 457 7.03e-52 177
MsG0780037542.01.T01 MTR_3g082890 39.766 342 157 14 1 308 157 483 1.57e-50 174
MsG0780037542.01.T01 MTR_3g036250 36.250 320 166 12 1 306 68 363 4.40e-50 170
MsG0780037542.01.T01 MTR_7g056430 37.931 319 151 9 1 303 72 359 1.85e-48 174
MsG0780037542.01.T01 MTR_7g056420 37.931 319 151 9 1 303 72 359 2.08e-48 174
MsG0780037542.01.T01 MTR_3g082890 34.565 379 162 15 1 308 77 440 4.62e-46 161
MsG0780037542.01.T01 MTR_3g109982 42.688 253 123 11 65 301 222 468 3.44e-45 164
MsG0780037542.01.T01 MTR_3g109982 37.500 144 75 5 1 138 76 210 2.19e-12 68.2
MsG0780037542.01.T01 MTR_7g026500 35.032 314 182 10 9 308 89 394 4.70e-45 157
MsG0780037542.01.T01 MTR_5g008950 38.610 259 131 10 67 308 117 364 2.37e-44 155
MsG0780037542.01.T01 MTR_7g056020 36.218 312 171 10 1 301 72 366 3.19e-44 159
MsG0780037542.01.T01 MTR_8g085430 34.437 302 122 6 3 297 84 316 4.08e-42 148
MsG0780037542.01.T01 MTR_5g008920 34.146 328 175 13 1 308 74 380 4.83e-42 149
MsG0780037542.01.T01 MTR_6g045333 35.714 322 171 11 10 309 139 446 6.53e-42 150
MsG0780037542.01.T01 MTR_5g045170 33.333 321 183 9 8 309 83 391 2.32e-40 145
MsG0780037542.01.T01 MTR_7g056277 33.660 306 184 7 9 308 335 627 3.59e-40 148
MsG0780037542.01.T01 MTR_5g007410 35.443 316 173 12 10 306 102 405 4.66e-40 145
MsG0780037542.01.T01 MTR_7g056287 32.680 306 187 7 9 308 79 371 1.23e-39 143
MsG0780037542.01.T01 MTR_3g071850 34.688 320 169 12 10 305 102 405 2.46e-39 147
MsG0780037542.01.T01 MTR_3g040700 33.750 320 173 11 1 303 106 403 2.59e-39 143
MsG0780037542.01.T01 MTR_3g023630 32.154 311 189 10 4 306 75 371 6.42e-38 138
MsG0780037542.01.T01 MTR_3g105060 32.166 314 182 10 4 308 81 372 1.64e-37 137
MsG0780037542.01.T01 MTR_2g007450 31.805 349 184 13 1 307 82 418 2.40e-37 138
MsG0780037542.01.T01 MTR_1g108820 32.817 323 174 12 10 307 80 384 2.95e-37 137
MsG0780037542.01.T01 MTR_2g020180 43.503 177 85 4 136 308 49 214 2.81e-36 130
MsG0780037542.01.T01 MTR_7g081290 50.000 138 59 5 177 308 122 255 2.18e-35 129
MsG0780037542.01.T01 MTR_5g058000 34.796 319 179 10 1 308 74 374 2.86e-35 131
MsG0780037542.01.T01 MTR_4g080610 36.614 254 136 11 76 309 109 357 3.46e-35 130
MsG0780037542.01.T01 MTR_5g058100 33.856 319 173 12 9 308 84 383 5.85e-35 130
MsG0780037542.01.T01 MTR_1g066830 32.399 321 177 12 10 308 84 386 2.04e-34 129
MsG0780037542.01.T01 MTR_7g007080 37.165 261 128 10 67 307 133 377 4.63e-34 128
MsG0780037542.01.T01 MTR_3g115430 50.394 127 55 3 187 308 1 124 5.82e-34 121
MsG0780037542.01.T01 MTR_6g022500 34.076 314 177 11 9 307 176 474 1.11e-33 129
MsG0780037542.01.T01 MTR_1g085120 32.188 320 181 11 9 308 167 470 2.59e-33 127
MsG0780037542.01.T01 MTR_5g073420 31.447 318 185 11 4 308 82 379 4.03e-33 125
MsG0780037542.01.T01 MTR_1g085120 32.188 320 181 11 9 308 242 545 5.33e-33 127
MsG0780037542.01.T01 MTR_3g107100 34.799 273 147 11 61 307 129 396 6.19e-33 125
MsG0780037542.01.T01 MTR_3g107120 32.075 318 173 14 10 306 93 388 8.91e-33 125
MsG0780037542.01.T01 MTR_7g033945 60.784 102 37 2 1 101 74 173 1.43e-32 119
MsG0780037542.01.T01 MTR_1g108800 33.758 314 168 12 10 307 51 340 7.09e-32 121
MsG0780037542.01.T01 MTR_3g467400 34.277 318 164 15 9 308 76 366 9.09e-32 122
MsG0780037542.01.T01 MTR_7g060470 32.166 314 173 11 30 309 86 393 1.78e-31 121
MsG0780037542.01.T01 MTR_3g108560 36.207 232 124 8 1 222 83 300 1.28e-30 117
MsG0780037542.01.T01 MTR_5g073370 32.803 314 183 12 10 307 77 378 1.35e-30 119
MsG0780037542.01.T01 MTR_2g005990 34.768 302 162 15 28 307 105 393 3.67e-30 118
MsG0780037542.01.T01 MTR_5g031970 33.119 311 171 12 8 309 74 356 4.95e-30 117
MsG0780037542.01.T01 MTR_5g063950 30.671 313 190 9 8 306 60 359 8.48e-30 116
MsG0780037542.01.T01 MTR_2g036470 32.515 326 173 15 11 309 91 396 1.06e-29 117
MsG0780037542.01.T01 MTR_7g114710 31.629 313 177 10 4 308 80 363 3.69e-29 114
MsG0780037542.01.T01 MTR_4g039440 31.024 332 190 13 1 308 95 411 4.78e-29 115
MsG0780037542.01.T01 MTR_1g107385 30.827 266 147 9 66 307 169 421 8.49e-29 114
MsG0780037542.01.T01 MTR_6g040270 34.109 258 146 10 66 307 130 379 1.34e-28 113
MsG0780037542.01.T01 MTR_0009s0080 32.792 308 170 12 10 295 94 386 2.00e-28 114
MsG0780037542.01.T01 MTR_3g107940 48.000 125 53 3 181 301 89 205 2.49e-28 112
MsG0780037542.01.T01 MTR_2g007400 31.190 311 165 15 27 307 110 401 3.74e-28 112
MsG0780037542.01.T01 MTR_3g099830 32.143 308 165 14 30 307 79 372 4.18e-28 112
MsG0780037542.01.T01 MTR_5g039470 32.770 296 157 14 1 273 51 327 4.31e-28 111
MsG0780037542.01.T01 MTR_5g045510 31.230 317 177 11 4 307 82 370 5.57e-28 111
MsG0780037542.01.T01 MTR_6g022520 31.045 335 181 12 1 308 1 312 8.06e-28 110
MsG0780037542.01.T01 MTR_1g053025 29.885 261 147 10 71 306 137 386 9.13e-28 111
MsG0780037542.01.T01 MTR_5g039450 33.054 239 126 9 88 306 131 355 9.54e-28 110
MsG0780037542.01.T01 MTR_6g011460 32.308 325 180 12 4 308 116 420 1.41e-27 111
MsG0780037542.01.T01 MTR_3g026920 33.459 266 122 11 66 306 167 402 3.06e-27 110
MsG0780037542.01.T01 MTR_5g054920 34.171 199 108 8 107 291 2 191 2.41e-26 103
MsG0780037542.01.T01 MTR_3g107160 30.241 291 172 13 30 306 107 380 3.11e-26 107
MsG0780037542.01.T01 MTR_4g098590 33.684 285 154 12 27 288 95 367 3.76e-26 106
MsG0780037542.01.T01 MTR_7g083740 28.618 304 167 11 27 309 93 367 5.48e-26 106
MsG0780037542.01.T01 MTR_1089s0010 31.677 322 181 15 6 308 77 378 5.80e-26 106
MsG0780037542.01.T01 MTR_7g075820 30.909 275 155 11 54 307 132 392 1.75e-25 105
MsG0780037542.01.T01 MTR_2g007550 34.762 210 97 8 123 306 137 332 1.90e-25 104
MsG0780037542.01.T01 MTR_5g039490 32.063 315 165 12 8 307 94 374 3.13e-25 104
MsG0780037542.01.T01 MTR_7g007340 30.208 288 172 10 31 303 78 351 1.26e-24 102
MsG0780037542.01.T01 MTR_2g007090 32.766 235 117 11 88 308 86 293 2.86e-24 100
MsG0780037542.01.T01 MTR_6g029350 31.579 209 117 10 111 307 2 196 7.03e-24 97.8
MsG0780037542.01.T01 MTR_7g021990 34.252 254 140 10 67 299 168 415 7.82e-24 100
MsG0780037542.01.T01 MTR_5g083890 30.888 259 143 10 65 298 144 391 1.09e-23 101
MsG0780037542.01.T01 MTR_7g055943 30.031 323 186 13 9 308 115 420 1.19e-23 100
MsG0780037542.01.T01 MTR_7g021950 34.252 254 140 10 67 299 168 415 1.30e-23 100
MsG0780037542.01.T01 MTR_7g022105 32.283 254 137 9 67 293 169 414 1.63e-23 100
MsG0780037542.01.T01 MTR_2g007360 32.130 277 126 14 73 307 116 372 3.91e-23 98.6
MsG0780037542.01.T01 MTR_6g022360 31.698 265 151 9 66 309 153 408 4.85e-23 98.6
MsG0780037542.01.T01 MTR_1g043170 52.326 86 37 2 224 308 5 87 5.50e-23 91.3
MsG0780037542.01.T01 MTR_2g008310 28.996 269 156 11 60 307 115 369 1.36e-22 97.1
MsG0780037542.01.T01 MTR_2g007500 32.946 258 131 11 27 256 91 334 5.50e-22 94.7
MsG0780037542.01.T01 MTR_6g044572 30.000 300 154 13 28 308 125 387 8.76e-22 94.7
MsG0780037542.01.T01 MTR_2g008320 29.889 271 153 13 60 307 169 425 2.47e-21 94.0
MsG0780037542.01.T01 MTR_6g044560 30.000 300 154 13 28 308 301 563 3.26e-21 94.4
MsG0780037542.01.T01 MTR_3g110010 37.073 205 102 9 65 246 222 422 3.51e-21 94.4
MsG0780037542.01.T01 MTR_5g008910 46.067 89 44 2 221 308 216 301 1.47e-19 87.4
MsG0780037542.01.T01 MTR_3g113785 46.316 95 37 2 181 267 4 92 1.70e-19 82.0
MsG0780037542.01.T01 MTR_3g095630 33.333 183 102 8 137 308 12 185 6.77e-19 83.2
MsG0780037542.01.T01 MTR_1g059860 29.452 292 141 11 26 269 36 310 9.87e-19 85.5
MsG0780037542.01.T01 MTR_1g108820 31.064 235 123 10 10 220 80 299 2.24e-18 84.7
MsG0780037542.01.T01 MTR_7g034090 35.119 168 89 7 150 308 155 311 3.15e-18 85.1
MsG0780037542.01.T01 MTR_7g007370 32.819 259 135 9 65 305 96 333 3.16e-18 84.3
MsG0780037542.01.T01 MTR_3g113770 31.553 206 85 7 67 267 180 334 3.80e-18 84.0
MsG0780037542.01.T01 MTR_5g065100 30.241 291 153 11 28 309 100 349 5.39e-18 84.3
MsG0780037542.01.T01 MTR_2g007610 37.037 135 70 3 178 307 25 149 9.60e-18 79.7
MsG0780037542.01.T01 MTR_8g077460 28.479 309 188 12 10 308 89 374 9.98e-18 83.2
MsG0780037542.01.T01 MTR_3g071790 30.645 186 103 8 105 271 24 202 1.30e-17 80.1
MsG0780037542.01.T01 MTR_3g106960 35.811 148 78 5 164 302 52 191 3.00e-17 79.7
MsG0780037542.01.T01 MTR_5g073340 33.166 199 110 7 67 246 106 300 3.87e-17 80.9
MsG0780037542.01.T01 MTR_5g024060 34.091 132 84 2 171 301 71 200 4.96e-17 79.3
MsG0780037542.01.T01 MTR_3g108140 46.914 81 42 1 230 309 68 148 6.70e-17 77.4
MsG0780037542.01.T01 MTR_1377s0010 33.571 140 81 4 153 292 10 137 7.52e-17 76.3
MsG0780037542.01.T01 MTR_7g056280 37.615 109 56 2 178 277 441 546 9.91e-17 80.9
MsG0780037542.01.T01 MTR_5g033200 33.533 167 96 7 141 299 13 172 1.27e-16 76.6
MsG0780037542.01.T01 MTR_8g070950 28.291 357 182 14 10 308 93 433 1.27e-15 77.4
MsG0780037542.01.T01 MTR_5g061680 30.403 273 146 12 1 266 78 313 1.30e-15 76.6
MsG0780037542.01.T01 MTR_4g096730 46.250 80 39 2 230 308 12 88 2.96e-15 70.9
MsG0780037542.01.T01 MTR_4g134150 35.593 177 90 9 1 172 73 230 5.79e-15 73.2
MsG0780037542.01.T01 MTR_1g085120 30.303 231 127 9 9 220 254 469 2.23e-14 73.6
MsG0780037542.01.T01 MTR_3g094980 32.143 112 69 2 171 277 8 117 4.66e-14 69.3
MsG0780037542.01.T01 MTR_7g075800 25.490 255 136 10 66 273 144 391 5.42e-14 72.8
MsG0780037542.01.T01 MTR_2g007530 31.461 178 84 6 144 306 180 334 1.66e-13 70.5
MsG0780037542.01.T01 MTR_8g014210 33.051 118 68 2 196 308 119 230 3.43e-13 68.2
MsG0780037542.01.T01 MTR_8g062310 26.966 267 140 10 89 308 169 427 7.45e-13 68.9
MsG0780037542.01.T01 MTR_5g076150 33.654 208 100 9 67 242 26 227 1.20e-12 66.6
MsG0780037542.01.T01 MTR_5g044790 33.571 140 60 4 202 309 302 440 1.47e-12 68.2
MsG0780037542.01.T01 MTR_7g056417 38.000 150 75 7 66 198 10 158 2.82e-12 64.3
MsG0780037542.01.T01 MTR_8g058965 25.464 377 191 17 10 308 91 455 2.82e-12 67.4
MsG0780037542.01.T01 MTR_7g056447 38.710 124 61 4 1 119 72 185 2.83e-12 66.6
MsG0780037542.01.T01 MTR_7g033940 60.417 48 19 0 1 48 157 204 5.19e-12 64.7
MsG0780037542.01.T01 MTR_5g073400 35.965 114 61 3 10 121 7 110 5.33e-12 62.8
MsG0780037542.01.T01 MTR_1g053050 35.802 81 48 1 226 306 36 112 6.09e-12 62.0
MsG0780037542.01.T01 MTR_5g061410 31.188 202 118 6 28 219 77 267 6.14e-12 65.1
MsG0780037542.01.T01 MTR_4g080590 23.625 309 163 11 54 294 132 435 6.74e-12 66.2
MsG0780037542.01.T01 MTR_7g022060 41.558 77 44 1 228 303 248 324 8.99e-12 65.5
MsG0780037542.01.T01 MTR_8g058970 33.929 112 70 2 201 308 365 476 1.24e-11 65.5
MsG0780037542.01.T01 MTR_4g056040 25.000 336 171 11 15 277 114 441 1.85e-11 65.1
MsG0780037542.01.T01 MTR_8g062010 35.338 133 75 4 181 308 303 429 3.52e-11 63.9
MsG0780037542.01.T01 MTR_4g024710 28.736 261 145 11 72 308 103 346 5.20e-11 63.2
MsG0780037542.01.T01 MTR_5g092960 36.283 113 65 3 201 308 351 461 5.77e-11 63.5
MsG0780037542.01.T01 MTR_7g021930 41.558 77 44 1 228 303 248 324 5.87e-11 62.8
MsG0780037542.01.T01 MTR_7g021970 41.558 77 44 1 228 303 248 324 5.87e-11 62.8
MsG0780037542.01.T01 MTR_5g080710 30.075 133 87 3 180 309 325 454 8.89e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037542.01.T01 AT5G56370 29.539 369 184 14 1 308 67 420 7.02e-25 103
MsG0780037542.01.T01 AT5G56370 29.539 369 184 14 1 308 67 420 7.02e-25 103
MsG0780037542.01.T01 AT1G32375 27.042 355 196 12 10 308 74 421 6.17e-22 95.5
MsG0780037542.01.T01 AT1G32375 27.042 355 196 12 10 308 74 421 6.17e-22 95.5
MsG0780037542.01.T01 AT5G56380 25.916 382 192 12 1 308 74 438 2.44e-19 88.2
MsG0780037542.01.T01 AT5G56380 25.916 382 192 12 1 308 74 438 2.44e-19 88.2
MsG0780037542.01.T01 AT4G10400 29.167 360 182 17 2 308 69 408 1.82e-16 79.7
MsG0780037542.01.T01 AT4G10400 29.167 360 182 17 2 308 69 408 1.82e-16 79.7
MsG0780037542.01.T01 AT4G10400 29.167 360 182 17 2 308 69 408 1.82e-16 79.7
MsG0780037542.01.T01 AT5G62970 27.457 346 182 12 23 308 112 448 1.84e-15 77.0
MsG0780037542.01.T01 AT5G56420 29.434 265 164 12 56 308 168 421 4.82e-15 75.5
MsG0780037542.01.T01 AT5G56420 29.434 265 164 12 56 308 168 421 4.82e-15 75.5
MsG0780037542.01.T01 AT5G56420 29.434 265 164 12 56 308 168 421 4.82e-15 75.5
MsG0780037542.01.T01 AT4G26340 28.808 302 152 12 65 308 122 418 4.95e-15 75.5
MsG0780037542.01.T01 AT3G54910 27.645 293 160 10 65 308 83 372 1.99e-14 73.6
MsG0780037542.01.T01 AT3G54910 27.645 293 160 10 65 308 83 372 1.99e-14 73.6
MsG0780037542.01.T01 AT3G54910 27.645 293 160 10 65 308 83 372 1.99e-14 73.6
MsG0780037542.01.T01 AT3G50710 29.373 303 147 13 66 306 127 424 4.00e-14 72.8
MsG0780037542.01.T01 AT5G38565 39.316 117 64 3 195 307 226 339 1.56e-13 70.9
MsG0780037542.01.T01 AT5G56800 30.435 253 132 13 79 308 112 343 3.28e-13 69.7
MsG0780037542.01.T01 AT3G52690 27.483 302 141 12 78 309 5 298 8.69e-13 68.2
MsG0780037542.01.T01 AT5G38580 32.353 136 85 3 179 309 31 164 2.17e-12 64.7
MsG0780037542.01.T01 AT5G44940 26.316 323 183 12 10 306 81 374 3.98e-12 66.6
MsG0780037542.01.T01 AT4G26350 27.841 176 121 2 139 308 252 427 5.65e-12 66.2
MsG0780037542.01.T01 AT5G56390 26.263 297 151 13 73 308 135 424 7.33e-12 66.2
MsG0780037542.01.T01 AT3G51530 25.333 375 183 16 10 308 99 452 3.45e-11 63.9
MsG0780037542.01.T01 AT5G56560 24.796 367 197 14 1 308 71 417 4.73e-11 63.5
MsG0780037542.01.T01 AT1G50980 26.733 303 190 11 7 297 76 358 4.99e-11 63.2

Find 103 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAATTTATGTTTCGAAATA+TGG 0.152871 7:+28051710 MsG0780037542.01.T01:three_prime_UTR
GCATTTAGTCCTGGTATTAT+TGG 0.185725 7:-28051842 None:intergenic
CCTCAAATGTGGTGCCTCTA+AGG 0.205564 7:+28047621 MsG0780037542.01.T01:CDS
AGTTGAGAAGAAAGACATTT+TGG 0.210832 7:-28048462 None:intergenic
CCATAGTGGATTCCATCTTT+TGG 0.281030 7:-28047479 None:intergenic
AGCTTATATTCAAATCAAAT+TGG 0.311318 7:+28048234 MsG0780037542.01.T01:CDS
GTTTAAACACTTGCCCAATT+TGG 0.316334 7:+28047990 MsG0780037542.01.T01:CDS
GAAGTGTGTTTATACATTAT+AGG 0.318866 7:-28051786 None:intergenic
TTGCAAAACGAAAACAAATT+AGG 0.320092 7:+28047739 MsG0780037542.01.T01:CDS
AAGTGTGTTTATACATTATA+GGG 0.321716 7:-28051785 None:intergenic
AATGTTTGCTCTGACCAAAT+TGG 0.323622 7:-28048004 None:intergenic
CAATATACACGTCACTTGTT+TGG 0.362154 7:+28051593 MsG0780037542.01.T01:three_prime_UTR
CACGAAATATTCAATTTGCT+TGG 0.381703 7:+28048040 MsG0780037542.01.T01:CDS
ATGTTTGCTCTGACCAAATT+GGG 0.383897 7:-28048003 None:intergenic
CTATGTATGCATTTGAAAGA+TGG 0.393659 7:+28047958 MsG0780037542.01.T01:CDS
TTCAAAGTACCAAATGCTAA+TGG 0.395151 7:+28048608 MsG0780037542.01.T01:CDS
AAGATAAATCCATTAGCATT+TGG 0.397989 7:-28048617 None:intergenic
CGCGTTTAAAATGACGATTA+AGG 0.399254 7:+28051496 MsG0780037542.01.T01:three_prime_UTR
CCAAAAGATGGAATCCACTA+TGG 0.409482 7:+28047479 MsG0780037542.01.T01:five_prime_UTR
CAGTGGGTCCCATCCCTTAG+AGG 0.410709 7:-28047635 None:intergenic
GAAAGATTGAAGGGGCAAGG+TGG 0.411583 7:-28047596 None:intergenic
TTCATTCATTTGATTGAAGA+AGG 0.412893 7:+28048671 MsG0780037542.01.T01:exon
ACCGACTCTCGATGATTTGA+AGG 0.418376 7:+28051533 MsG0780037542.01.T01:three_prime_UTR
AATCAAATTGGCGTACCAAA+TGG 0.421083 7:+28048246 MsG0780037542.01.T01:CDS
TACTTTGAAGTTAAATCCCC+TGG 0.422414 7:-28048594 None:intergenic
TTCTAGCAACCACTCCCATT+TGG 0.429349 7:-28048261 None:intergenic
TAACACTTATTTGAGCATCT+TGG 0.430627 7:+28051563 MsG0780037542.01.T01:three_prime_UTR
ATGTGGATGATAACGGAATC+AGG 0.435950 7:-28047409 None:intergenic
AAGGGGCAAGGTGGGGTCAC+GGG 0.436348 7:-28047587 None:intergenic
GCTTGTTGCGGCAGATTGTT+TGG 0.436931 7:-28047449 None:intergenic
GTGTATGTTCAAAACTCAAA+TGG 0.447562 7:-28051820 None:intergenic
ATTTCCAACTCCTCTAGAAC+GGG 0.451009 7:-28047925 None:intergenic
GTTGCGGCAGATTGTTTGGT+AGG 0.455605 7:-28047445 None:intergenic
AGTCATGGTCGTCGAAATCA+AGG 0.455609 7:-28047516 None:intergenic
CCTTAGAGGCACCACATTTG+AGG 0.457206 7:-28047621 None:intergenic
GGATTTATCTTTGTGTCCAC+GGG 0.458684 7:+28048629 MsG0780037542.01.T01:CDS
CAAAACTCTCCGATTGGAAA+AGG 0.458941 7:+28047861 MsG0780037542.01.T01:CDS
TAGGGAGAAAAGAGAGGATG+TGG 0.460159 7:-28047426 None:intergenic
CAAGCAAATTGAATATTTCG+TGG 0.460201 7:-28048039 None:intergenic
ATCAAATTGGCGTACCAAAT+GGG 0.460382 7:+28048247 MsG0780037542.01.T01:CDS
TGGATTTATCTTTGTGTCCA+CGG 0.462692 7:+28048628 MsG0780037542.01.T01:CDS
ATGCATTTGAAAGATGGTAT+TGG 0.467638 7:+28047964 MsG0780037542.01.T01:CDS
GGTGGGGTCACGGGAGAGCA+TGG 0.472147 7:-28047578 None:intergenic
GAAGGGGCAAGGTGGGGTCA+CGG 0.479201 7:-28047588 None:intergenic
ATGGTATTGATGACGATGAT+TGG 0.484330 7:+28048421 MsG0780037542.01.T01:CDS
ATGACAGTTAGTGCCTCTCC+AGG 0.486349 7:+28048576 MsG0780037542.01.T01:CDS
CGCTATCGTCTTCAATAAGA+AGG 0.487408 7:-28051683 None:intergenic
AGAGAGGATGTGGATGATAA+CGG 0.490532 7:-28047416 None:intergenic
CAAGCATCCTCTCCAAAAGA+TGG 0.493960 7:+28047467 MsG0780037542.01.T01:five_prime_UTR
ATTTGAGGTGGAAAGATTGA+AGG 0.498739 7:-28047606 None:intergenic
CTCTAAGGGATGGGACCCAC+TGG 0.499288 7:+28047636 MsG0780037542.01.T01:CDS
ACCAATCGATTGATATCCAG+TGG 0.502266 7:-28047652 None:intergenic
TGTCATTGTGCGCAGTAAGT+TGG 0.507051 7:-28048559 None:intergenic
AAAGATTGAAGGGGCAAGGT+GGG 0.510237 7:-28047595 None:intergenic
AGTAGGGGAAAATCGATTTG+AGG 0.510436 7:-28047838 None:intergenic
ATTCATCTCTATCTTCTCCT+AGG 0.510833 7:-28051634 None:intergenic
GTTTCTAGAATTGAAAATTG+TGG 0.512806 7:-28047773 None:intergenic
AGGAACTCAGAATTTCATCC+TGG 0.513315 7:+28047693 MsG0780037542.01.T01:CDS
CTCAAATGTGGTGCCTCTAA+GGG 0.520083 7:+28047622 MsG0780037542.01.T01:CDS
GTTTGGTAGGGAGAAAAGAG+AGG 0.522751 7:-28047432 None:intergenic
ATTTATGTTTCGAAATATGG+TGG 0.526052 7:+28051713 MsG0780037542.01.T01:three_prime_UTR
TTGAAAATTGTGGAAACTGT+AGG 0.536949 7:-28047763 None:intergenic
TTGCGGCAGATTGTTTGGTA+GGG 0.542710 7:-28047444 None:intergenic
GTGTCCCGTTCTAGAGGAGT+TGG 0.547293 7:+28047921 MsG0780037542.01.T01:CDS
CCTACTCAAAACTCTCCGAT+TGG 0.553375 7:+28047855 MsG0780037542.01.T01:CDS
CGAGGGGTGTCCCGTTCTAG+AGG 0.554179 7:+28047915 MsG0780037542.01.T01:CDS
CAATCTTTCCACCTCAAATG+TGG 0.559675 7:+28047610 MsG0780037542.01.T01:CDS
CCCACTGGATATCAATCGAT+TGG 0.565331 7:+28047651 MsG0780037542.01.T01:CDS
GTGGAAAGATTGAAGGGGCA+AGG 0.566925 7:-28047599 None:intergenic
GTGGGAACTGAGAGCCATAG+TGG 0.567873 7:-28047493 None:intergenic
AATGTGGTGCCTCTAAGGGA+TGG 0.567873 7:+28047626 MsG0780037542.01.T01:CDS
TATTTCCAACTCCTCTAGAA+CGG 0.569092 7:-28047926 None:intergenic
ATGTGGTGCCTCTAAGGGAT+GGG 0.569283 7:+28047627 MsG0780037542.01.T01:CDS
CATAAATACAACCTTGTGAA+GGG 0.570727 7:-28048318 None:intergenic
TTTGAGGTGGAAAGATTGAA+GGG 0.575816 7:-28047605 None:intergenic
ACATAAATACAACCTTGTGA+AGG 0.576752 7:-28048319 None:intergenic
AAGATAGAGATGAATACGCA+TGG 0.584106 7:+28051642 MsG0780037542.01.T01:three_prime_UTR
TTTGGAGAGGATGCTTGTTG+CGG 0.587980 7:-28047461 None:intergenic
TGACAGTTAGTGCCTCTCCA+GGG 0.588951 7:+28048577 MsG0780037542.01.T01:CDS
TAGAGGCACCACATTTGAGG+TGG 0.600933 7:-28047618 None:intergenic
ATGAATGAAAGTTTACATGT+CGG 0.601979 7:-28048657 None:intergenic
TAGCGAAATCTGCAAAGTCA+TGG 0.610175 7:-28047531 None:intergenic
TCAAAATCTTACCCTTCACA+AGG 0.613722 7:+28048307 MsG0780037542.01.T01:CDS
TCTTCTCCTAGGTCTATGCA+TGG 0.621638 7:-28051623 None:intergenic
CAAATGCCATGCATAGACCT+AGG 0.626157 7:+28051617 MsG0780037542.01.T01:three_prime_UTR
TGAAGTTAAATCCCCTGGAG+AGG 0.628494 7:-28048589 None:intergenic
AAGATTGAAGGGGCAAGGTG+GGG 0.629379 7:-28047594 None:intergenic
GTTCGCGCTGCTGTGCAAAG+AGG 0.632333 7:+28047673 MsG0780037542.01.T01:CDS
TGGTCGTCGAAATCAAGGGT+GGG 0.634918 7:-28047511 None:intergenic
GAACATACACCAATAATACC+AGG 0.638162 7:+28051833 MsG0780037542.01.T01:three_prime_UTR
GACAGTTAGTGCCTCTCCAG+GGG 0.639117 7:+28048578 MsG0780037542.01.T01:CDS
GCCTTCAAATCATCGAGAGT+CGG 0.646943 7:-28051534 None:intergenic
ATGGTCGTCGAAATCAAGGG+TGG 0.651093 7:-28047512 None:intergenic
ATTGGCGTACCAAATGGGAG+TGG 0.652622 7:+28048252 MsG0780037542.01.T01:CDS
TGTCAAGTGAAACATGTCTG+AGG 0.662600 7:+28051442 MsG0780037542.01.T01:three_prime_UTR
TTGAGGTGGAAAGATTGAAG+GGG 0.664534 7:-28047604 None:intergenic
CGACAGTTGAAATTGAACGT+AGG 0.665403 7:-28047369 None:intergenic
TCAAATCATCGAGAGTCGGT+CGG 0.665479 7:-28051530 None:intergenic
GTCATGGTCGTCGAAATCAA+GGG 0.677362 7:-28047515 None:intergenic
CCAATCGATTGATATCCAGT+GGG 0.697481 7:-28047651 None:intergenic
TTACATGTCGGAGAGCCCCG+TGG 0.701896 7:-28048645 None:intergenic
TGCTCGCTTAGAGATTACAA+AGG 0.712734 7:+28048492 MsG0780037542.01.T01:CDS
GATTTATCTTTGTGTCCACG+GGG 0.728742 7:+28048630 MsG0780037542.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAATATGAAATAAAA+GGG - Chr7:28049831-28049850 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG - Chr7:28049832-28049851 None:intergenic 10.0%
!!! ATTTTTTTTTTTGAATAGTA+TGG + Chr7:28049890-28049909 MsG0780037542.01.T01:intron 10.0%
!!! TTTTTCTTTTTACATAATTA+AGG + Chr7:28050135-28050154 MsG0780037542.01.T01:intron 10.0%
!! CAAAAAACTTATTTGAAAAT+TGG - Chr7:28049118-28049137 None:intergenic 15.0%
!! CTAATATAACATTAGAAAAT+AGG - Chr7:28048719-28048738 None:intergenic 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - Chr7:28049760-28049779 None:intergenic 15.0%
!! AAAGTACAATAATCGTATTA+GGG + Chr7:28048833-28048852 MsG0780037542.01.T01:intron 20.0%
!! AAGTGTGTTTATACATTATA+GGG - Chr7:28051788-28051807 None:intergenic 20.0%
!! AATGAAATTTCTTCTTTACT+AGG + Chr7:28050725-28050744 MsG0780037542.01.T01:intron 20.0%
!! AGCTTATATTCAAATCAAAT+TGG + Chr7:28048234-28048253 MsG0780037542.01.T01:CDS 20.0%
!! AGGGAATTAATTAAGTTTAT+GGG + Chr7:28050947-28050966 MsG0780037542.01.T01:intron 20.0%
!! ATTAATGAACATGTTTATTG+TGG + Chr7:28050195-28050214 MsG0780037542.01.T01:intron 20.0%
!! ATTGAGACTATTATTATGAA+TGG + Chr7:28049527-28049546 MsG0780037542.01.T01:intron 20.0%
!! TAAATGCAAAAAATATTGCA+TGG + Chr7:28051858-28051877 MsG0780037542.01.T01:three_prime_UTR 20.0%
!! TCTGGTATTAAATTTATTAG+TGG + Chr7:28049915-28049934 MsG0780037542.01.T01:intron 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + Chr7:28049780-28049799 MsG0780037542.01.T01:intron 20.0%
!!! AAAAGTACAATAATCGTATT+AGG + Chr7:28048832-28048851 MsG0780037542.01.T01:intron 20.0%
!!! AACATATTTTTAACTTAGAG+AGG - Chr7:28049564-28049583 None:intergenic 20.0%
!!! ATGATAATATGACTTTTATG+TGG + Chr7:28051307-28051326 MsG0780037542.01.T01:intron 20.0%
!!! GAAATTTTGAGTAATGTTTA+AGG + Chr7:28049858-28049877 MsG0780037542.01.T01:intron 20.0%
!!! GCATTACAATTTTTTTTACT+AGG + Chr7:28050594-28050613 MsG0780037542.01.T01:intron 20.0%
! AAATCTTTAGTTGTGTATTC+AGG - Chr7:28050071-28050090 None:intergenic 25.0%
! AACAAAAACAATTATCAGCA+AGG - Chr7:28049174-28049193 None:intergenic 25.0%
! AAGATAAATCCATTAGCATT+TGG - Chr7:28048620-28048639 None:intergenic 25.0%
! AATAAAACTTACCTGAAAGT+TGG - Chr7:28049393-28049412 None:intergenic 25.0%
! AGTGACAAGTAATAAAAACA+CGG - Chr7:28049503-28049522 None:intergenic 25.0%
! ATACATAAGTGTCTTCTAAA+AGG + Chr7:28051079-28051098 MsG0780037542.01.T01:intron 25.0%
! ATGAATGAAAGTTTACATGT+CGG - Chr7:28048660-28048679 None:intergenic 25.0%
! ATGCAATAATATCAATGTGA+TGG + Chr7:28048748-28048767 MsG0780037542.01.T01:intron 25.0%
! ATTTATGTTTCGAAATATGG+TGG + Chr7:28051713-28051732 MsG0780037542.01.T01:three_prime_UTR 25.0%
! CACTTGCTTAACTAATTTAA+TGG + Chr7:28050649-28050668 MsG0780037542.01.T01:intron 25.0%
! CATTAAATTAGTTAAGCAAG+TGG - Chr7:28050651-28050670 None:intergenic 25.0%
! CGAATTTATGTTTCGAAATA+TGG + Chr7:28051710-28051729 MsG0780037542.01.T01:three_prime_UTR 25.0%
! GAAGTGTGTTTATACATTAT+AGG - Chr7:28051789-28051808 None:intergenic 25.0%
! GAGGGAATTAATTAAGTTTA+TGG + Chr7:28050946-28050965 MsG0780037542.01.T01:intron 25.0%
! GTTACTTACTATGAACTTAT+TGG - Chr7:28051264-28051283 None:intergenic 25.0%
! TATTAGGGTTTGTATTGTAT+TGG + Chr7:28048848-28048867 MsG0780037542.01.T01:intron 25.0%
! TTCATTCATTTGATTGAAGA+AGG + Chr7:28048671-28048690 MsG0780037542.01.T01:exon 25.0%
! TTGCAAAACGAAAACAAATT+AGG + Chr7:28047739-28047758 MsG0780037542.01.T01:CDS 25.0%
! TTTCAATATGAACTTAGTGA+TGG - Chr7:28049267-28049286 None:intergenic 25.0%
!! AATATAGGAAGTATAGGATA+AGG + Chr7:28051015-28051034 MsG0780037542.01.T01:intron 25.0%
!! TTTTCAACTTAAGAACAACA+AGG - Chr7:28047798-28047817 None:intergenic 25.0%
!! TTTTCATAACTTAACTCACA+TGG + Chr7:28048211-28048230 MsG0780037542.01.T01:CDS 25.0%
!! TTTTTGAATAGTATGGTATC+TGG + Chr7:28049897-28049916 MsG0780037542.01.T01:intron 25.0%
!!! AATACAGTGTTTTTGAATGT+CGG + Chr7:28050354-28050373 MsG0780037542.01.T01:intron 25.0%
!!! ACTTTCAGGTAAGTTTTATT+AGG + Chr7:28049393-28049412 MsG0780037542.01.T01:intron 25.0%
!!! ATATTTTTTGCATTTAGTCC+TGG - Chr7:28051854-28051873 None:intergenic 25.0%
!!! GTTTCTAGAATTGAAAATTG+TGG - Chr7:28047776-28047795 None:intergenic 25.0%
!!! TGAATTTTTTTTATCATGCG+AGG + Chr7:28051216-28051235 MsG0780037542.01.T01:intron 25.0%
AAAACAATTATCAGCAAGGA+AGG - Chr7:28049170-28049189 None:intergenic 30.0%
AAAGAGCAGTTAACAAAAGT+CGG - Chr7:28049475-28049494 None:intergenic 30.0%
ACAATGGAAAATTGACAATG+CGG + Chr7:28050297-28050316 MsG0780037542.01.T01:intron 30.0%
ACATAAATACAACCTTGTGA+AGG - Chr7:28048322-28048341 None:intergenic 30.0%
ACATGTTTATTGTGGACATA+TGG + Chr7:28050203-28050222 MsG0780037542.01.T01:intron 30.0%
AGGTACAAAAGAAAATAACC+AGG + Chr7:28051236-28051255 MsG0780037542.01.T01:intron 30.0%
ATGCATTTGAAAGATGGTAT+TGG + Chr7:28047964-28047983 MsG0780037542.01.T01:CDS 30.0%
CAAGCAAATTGAATATTTCG+TGG - Chr7:28048042-28048061 None:intergenic 30.0%
CATAAATACAACCTTGTGAA+GGG - Chr7:28048321-28048340 None:intergenic 30.0%
CTATGTATGCATTTGAAAGA+TGG + Chr7:28047958-28047977 MsG0780037542.01.T01:CDS 30.0%
CTTCAACTTAATGTAACTCT+AGG - Chr7:28048130-28048149 None:intergenic 30.0%
GTATGGGATGTAGAATAAAT+GGG + Chr7:28050856-28050875 MsG0780037542.01.T01:intron 30.0%
GTGTATGTTCAAAACTCAAA+TGG - Chr7:28051823-28051842 None:intergenic 30.0%
GTTGGAAATGTTATCAAACA+AGG + Chr7:28051127-28051146 MsG0780037542.01.T01:intron 30.0%
TAACACTTATTTGAGCATCT+TGG + Chr7:28051563-28051582 MsG0780037542.01.T01:three_prime_UTR 30.0%
TATAGGATAAGGCTATGTTT+GGG + Chr7:28051026-28051045 MsG0780037542.01.T01:intron 30.0%
TCATTTGATTGAAGAAGGTT+AGG + Chr7:28048676-28048695 MsG0780037542.01.T01:intron 30.0%
TTGAAAATTGTGGAAACTGT+AGG - Chr7:28047766-28047785 None:intergenic 30.0%
TTGTATTTATAGCCCTCTAT+GGG + Chr7:28048896-28048915 MsG0780037542.01.T01:intron 30.0%
TTTATTGTGGACATATGGAA+TGG + Chr7:28050208-28050227 MsG0780037542.01.T01:intron 30.0%
! AAAGTTTTTGCGTTTAGAAG+TGG + Chr7:28048074-28048093 MsG0780037542.01.T01:CDS 30.0%
! AGTTGAGAAGAAAGACATTT+TGG - Chr7:28048465-28048484 None:intergenic 30.0%
! CACGAAATATTCAATTTGCT+TGG + Chr7:28048040-28048059 MsG0780037542.01.T01:CDS 30.0%
! CTTTTATGTGGTGAAACTAA+TGG + Chr7:28051319-28051338 MsG0780037542.01.T01:intron 30.0%
! GCTAGAAATATAGGAAGTAT+AGG + Chr7:28051009-28051028 MsG0780037542.01.T01:intron 30.0%
! TAACAGTTTTACTCAAATCC+AGG - Chr7:28047714-28047733 None:intergenic 30.0%
! TAGTCTTTTGAATGAGTGTA+GGG + Chr7:28049349-28049368 MsG0780037542.01.T01:intron 30.0%
! TTCAAAGTACCAAATGCTAA+TGG + Chr7:28048608-28048627 MsG0780037542.01.T01:CDS 30.0%
!! AATAGGGGTATTTGGTATTT+AGG + Chr7:28048948-28048967 MsG0780037542.01.T01:intron 30.0%
!! ACTTCCTATATTTCTAGCAT+AGG - Chr7:28051007-28051026 None:intergenic 30.0%
!! AGATTTTGATAAGCTTATCG+AGG + Chr7:28047897-28047916 MsG0780037542.01.T01:CDS 30.0%
!! ATTTTGATAAGCTTATCGAG+GGG + Chr7:28047899-28047918 MsG0780037542.01.T01:CDS 30.0%
!! CTTAATCGTCATTTTAAACG+CGG - Chr7:28051498-28051517 None:intergenic 30.0%
!! GATTTTGATAAGCTTATCGA+GGG + Chr7:28047898-28047917 MsG0780037542.01.T01:CDS 30.0%
!!! AGACATTTTGGAACAATTTG+TGG - Chr7:28048453-28048472 None:intergenic 30.0%
!!! AGGGTAAGATTTTGAAGTTT+AGG - Chr7:28048302-28048321 None:intergenic 30.0%
!!! GGGTAAGATTTTGAAGTTTA+GGG - Chr7:28048301-28048320 None:intergenic 30.0%
AAACAGTACGACAATGCATT+AGG + Chr7:28049326-28049345 MsG0780037542.01.T01:intron 35.0%
AAGATAGAGATGAATACGCA+TGG + Chr7:28051642-28051661 MsG0780037542.01.T01:three_prime_UTR 35.0%
AAGGCCTATGCTAGAAATAT+AGG + Chr7:28051000-28051019 MsG0780037542.01.T01:intron 35.0%
AATCAAATTGGCGTACCAAA+TGG + Chr7:28048246-28048265 MsG0780037542.01.T01:CDS 35.0%
AATGTTTGCTCTGACCAAAT+TGG - Chr7:28048007-28048026 None:intergenic 35.0%
AATTGCACACTCTCTAATGT+AGG + Chr7:28049430-28049449 MsG0780037542.01.T01:intron 35.0%
ACTATGAACTTATTGGAACC+TGG - Chr7:28051257-28051276 None:intergenic 35.0%
AGCAAGGAAGGAAATTTAAC+AGG - Chr7:28049158-28049177 None:intergenic 35.0%
AGGAAATTTAACAGGTTTGG+AGG - Chr7:28049150-28049169 None:intergenic 35.0%
AGTATGGTAATCCTCTATGA+CGG + Chr7:28050484-28050503 MsG0780037542.01.T01:intron 35.0%
ATAGGATAAGGCTATGTTTG+GGG + Chr7:28051027-28051046 MsG0780037542.01.T01:intron 35.0%
ATCAAATTGGCGTACCAAAT+GGG + Chr7:28048247-28048266 MsG0780037542.01.T01:CDS 35.0%
ATGTTTGCTCTGACCAAATT+GGG - Chr7:28048006-28048025 None:intergenic 35.0%
ATTCATCTCTATCTTCTCCT+AGG - Chr7:28051637-28051656 None:intergenic 35.0%
ATTGCACACTCTCTAATGTA+GGG + Chr7:28049431-28049450 MsG0780037542.01.T01:intron 35.0%
CAATATACACGTCACTTGTT+TGG + Chr7:28051593-28051612 MsG0780037542.01.T01:three_prime_UTR 35.0%
CTGAGGTTGCAAAAATTGAA+GGG + Chr7:28051459-28051478 MsG0780037542.01.T01:three_prime_UTR 35.0%
GAACATACACCAATAATACC+AGG + Chr7:28051833-28051852 MsG0780037542.01.T01:three_prime_UTR 35.0%
GCATTTAGTCCTGGTATTAT+TGG - Chr7:28051845-28051864 None:intergenic 35.0%
GGAAGGAAATTTAACAGGTT+TGG - Chr7:28049153-28049172 None:intergenic 35.0%
GGACTGATTAGTGATTACTT+AGG + Chr7:28048917-28048936 MsG0780037542.01.T01:intron 35.0%
GGTATGGGATGTAGAATAAA+TGG + Chr7:28050855-28050874 MsG0780037542.01.T01:intron 35.0%
GGTCCTTAGGAATATAATGA+CGG + Chr7:28049091-28049110 MsG0780037542.01.T01:intron 35.0%
GTATAGGATAAGGCTATGTT+TGG + Chr7:28051025-28051044 MsG0780037542.01.T01:intron 35.0%
GTTGTATTTATAGCCCTCTA+TGG + Chr7:28048895-28048914 MsG0780037542.01.T01:intron 35.0%
GTTTAAACACTTGCCCAATT+TGG + Chr7:28047990-28048009 MsG0780037542.01.T01:CDS 35.0%
TAATAGAGGCAGAAACAAGA+GGG + Chr7:28050928-28050947 MsG0780037542.01.T01:intron 35.0%
TAATGGCCTAAAACAGTTGA+GGG + Chr7:28050666-28050685 MsG0780037542.01.T01:intron 35.0%
TACTATTTATAGGTCCGCTT+TGG - Chr7:28049750-28049769 None:intergenic 35.0%
TACTTAGGCAGCAAGTAATA+GGG + Chr7:28048932-28048951 MsG0780037542.01.T01:intron 35.0%
TCAAAATCTTACCCTTCACA+AGG + Chr7:28048307-28048326 MsG0780037542.01.T01:CDS 35.0%
TGGATTTATCTTTGTGTCCA+CGG + Chr7:28048628-28048647 MsG0780037542.01.T01:CDS 35.0%
TGTTCATTAATCAGCGTACA+AGG - Chr7:28050186-28050205 None:intergenic 35.0%
TGTTTGGGGAAATATAGGTA+AGG + Chr7:28051041-28051060 MsG0780037542.01.T01:intron 35.0%
TTAATGGCCTAAAACAGTTG+AGG + Chr7:28050665-28050684 MsG0780037542.01.T01:intron 35.0%
TTACTTAGGCAGCAAGTAAT+AGG + Chr7:28048931-28048950 MsG0780037542.01.T01:intron 35.0%
! ATTTGAGGTGGAAAGATTGA+AGG - Chr7:28047609-28047628 None:intergenic 35.0%
! CGCGTTTAAAATGACGATTA+AGG + Chr7:28051496-28051515 MsG0780037542.01.T01:three_prime_UTR 35.0%
! GTAGTCTTTTGAATGAGTGT+AGG + Chr7:28049348-28049367 MsG0780037542.01.T01:intron 35.0%
! TAAATATCGGCTGATGTTGT+AGG + Chr7:28050420-28050439 MsG0780037542.01.T01:intron 35.0%
! TAGAGAGTGTGCAATTCAAT+TGG - Chr7:28049426-28049445 None:intergenic 35.0%
! TATTTCCAACTCCTCTAGAA+CGG - Chr7:28047929-28047948 None:intergenic 35.0%
! TCTGAGGTTGCAAAAATTGA+AGG + Chr7:28051458-28051477 MsG0780037542.01.T01:three_prime_UTR 35.0%
! TGCACTTTGTTTCATTAGCT+AGG + Chr7:28048782-28048801 MsG0780037542.01.T01:intron 35.0%
! TGCTAAGAGAAGTGTAAACA+AGG + Chr7:28050981-28051000 MsG0780037542.01.T01:intron 35.0%
! TTTGAGGTGGAAAGATTGAA+GGG - Chr7:28047608-28047627 None:intergenic 35.0%
!! ATGGTATTGATGACGATGAT+TGG + Chr7:28048421-28048440 MsG0780037542.01.T01:CDS 35.0%
!! TACTTTGAAGTTAAATCCCC+TGG - Chr7:28048597-28048616 None:intergenic 35.0%
!! TGGATATTGGTGGCTATTTT+TGG + Chr7:28050383-28050402 MsG0780037542.01.T01:intron 35.0%
!! TTTTGACAGCTTTATGGACA+TGG + Chr7:28048402-28048421 MsG0780037542.01.T01:intron 35.0%
!!! GGATATTGGTGGCTATTTTT+GGG + Chr7:28050384-28050403 MsG0780037542.01.T01:intron 35.0%
!!! TGCTGATTTTGACAGCTTTA+TGG + Chr7:28048396-28048415 MsG0780037542.01.T01:intron 35.0%
ACATCAGCCGATATTTACCA+TGG - Chr7:28050417-28050436 None:intergenic 40.0%
ACCAATCGATTGATATCCAG+TGG - Chr7:28047655-28047674 None:intergenic 40.0%
ACTTAGGCAGCAAGTAATAG+GGG + Chr7:28048933-28048952 MsG0780037542.01.T01:intron 40.0%
AGAGAGGATGTGGATGATAA+CGG - Chr7:28047419-28047438 None:intergenic 40.0%
AGGAACTCAGAATTTCATCC+TGG + Chr7:28047693-28047712 MsG0780037542.01.T01:CDS 40.0%
AGGGACAGCAAAATCGAAAA+TGG - Chr7:28049812-28049831 None:intergenic 40.0%
ATCACTAATCAGTCCCATAG+AGG - Chr7:28048912-28048931 None:intergenic 40.0%
ATCACTACTCATCACTAGCT+AGG + Chr7:28048104-28048123 MsG0780037542.01.T01:intron 40.0%
ATCAGCCGATATTTACCATG+GGG - Chr7:28050415-28050434 None:intergenic 40.0%
CAAAACTCTCCGATTGGAAA+AGG + Chr7:28047861-28047880 MsG0780037542.01.T01:CDS 40.0%
CAATCTTTCCACCTCAAATG+TGG + Chr7:28047610-28047629 MsG0780037542.01.T01:CDS 40.0%
CATCAGCCGATATTTACCAT+GGG - Chr7:28050416-28050435 None:intergenic 40.0%
CCAAAAGATGGAATCCACTA+TGG + Chr7:28047479-28047498 MsG0780037542.01.T01:five_prime_UTR 40.0%
CCAATCGATTGATATCCAGT+GGG - Chr7:28047654-28047673 None:intergenic 40.0%
CCTATGCTAGTATAGGGTAT+GGG + Chr7:28050840-28050859 MsG0780037542.01.T01:intron 40.0%
CGCTATCGTCTTCAATAAGA+AGG - Chr7:28051686-28051705 None:intergenic 40.0%
CTAATAGAGGCAGAAACAAG+AGG + Chr7:28050927-28050946 MsG0780037542.01.T01:intron 40.0%
CTGATGTCAATGCGAAAATG+CGG - Chr7:28050041-28050060 None:intergenic 40.0%
CTGCAAGTGACAACTAATAG+AGG + Chr7:28050914-28050933 MsG0780037542.01.T01:intron 40.0%
GATTTATCTTTGTGTCCACG+GGG + Chr7:28048630-28048649 MsG0780037542.01.T01:CDS 40.0%
GGACCGTCATTATATTCCTA+AGG - Chr7:28049097-28049116 None:intergenic 40.0%
GGATTTATCTTTGTGTCCAC+GGG + Chr7:28048629-28048648 MsG0780037542.01.T01:CDS 40.0%
GGCTATGTTTGGGGAAATAT+AGG + Chr7:28051036-28051055 MsG0780037542.01.T01:intron 40.0%
GGTCAATATCAGTCTCATTG+CGG + Chr7:28050569-28050588 MsG0780037542.01.T01:intron 40.0%
GTATCCACTTATGTGAGTGT+TGG + Chr7:28050697-28050716 MsG0780037542.01.T01:intron 40.0%
GTTAGCTAGTACCAACTTTC+AGG + Chr7:28049379-28049398 MsG0780037542.01.T01:intron 40.0%
TAGCGAAATCTGCAAAGTCA+TGG - Chr7:28047534-28047553 None:intergenic 40.0%
TATCCATGCTTATTGCTGTC+AGG + Chr7:28049202-28049221 MsG0780037542.01.T01:intron 40.0%
TCACTAATCAGTCCCATAGA+GGG - Chr7:28048911-28048930 None:intergenic 40.0%
TCATCCAACACTCACATAAG+TGG - Chr7:28050704-28050723 None:intergenic 40.0%
TGCTCGCTTAGAGATTACAA+AGG + Chr7:28048492-28048511 MsG0780037542.01.T01:CDS 40.0%
TGTCAAGTGAAACATGTCTG+AGG + Chr7:28051442-28051461 MsG0780037542.01.T01:three_prime_UTR 40.0%
TTGAGGTGGAAAGATTGAAG+GGG - Chr7:28047607-28047626 None:intergenic 40.0%
TTGGGGAAATATAGGTAAGG+TGG + Chr7:28051044-28051063 MsG0780037542.01.T01:intron 40.0%
! AACCAACCCTCAACTGTTTT+AGG - Chr7:28050675-28050694 None:intergenic 40.0%
! AGGTTTCTAGAAGCCATAAG+AGG + Chr7:28048981-28049000 MsG0780037542.01.T01:intron 40.0%
! CAAAAATTGAAGGGCGTGTT+AGG + Chr7:28051468-28051487 MsG0780037542.01.T01:three_prime_UTR 40.0%
! CTCTATTAGTTGTCACTTGC+AGG - Chr7:28050916-28050935 None:intergenic 40.0%
! CTTCTAAAAGGACTGTTGCT+GGG + Chr7:28051091-28051110 MsG0780037542.01.T01:intron 40.0%
! GAATCGCAACCTTTTCCAAT+CGG - Chr7:28047873-28047892 None:intergenic 40.0%
! TCTTCTAAAAGGACTGTTGC+TGG + Chr7:28051090-28051109 MsG0780037542.01.T01:intron 40.0%
! TGTATTGGTCATGCCTTTAG+AGG + Chr7:28048863-28048882 MsG0780037542.01.T01:intron 40.0%
! TGTGCAATTGAGCTTTTGCT+AGG + Chr7:28050817-28050836 MsG0780037542.01.T01:intron 40.0%
! TTTCTAGAAGCCATAAGAGG+CGG + Chr7:28048984-28049003 MsG0780037542.01.T01:intron 40.0%
!! AGTAGGGGAAAATCGATTTG+AGG - Chr7:28047841-28047860 None:intergenic 40.0%
!! ATGTGGATGATAACGGAATC+AGG - Chr7:28047412-28047431 None:intergenic 40.0%
!! ATTTCCAACTCCTCTAGAAC+GGG - Chr7:28047928-28047947 None:intergenic 40.0%
!! CAGCAAGTAATAGGGGTATT+TGG + Chr7:28048940-28048959 MsG0780037542.01.T01:intron 40.0%
!!! AATCGGAGAGTTTTGAGTAG+GGG - Chr7:28047856-28047875 None:intergenic 40.0%
!!! CAATCGGAGAGTTTTGAGTA+GGG - Chr7:28047857-28047876 None:intergenic 40.0%
!!! CCATAGTGGATTCCATCTTT+TGG - Chr7:28047482-28047501 None:intergenic 40.0%
!!! GGTAGTTTTAGCTTCTGATG+TGG + Chr7:28051148-28051167 MsG0780037542.01.T01:intron 40.0%
AAAGATTGAAGGGGCAAGGT+GGG - Chr7:28047598-28047617 None:intergenic 45.0%
AGTCATGGTCGTCGAAATCA+AGG - Chr7:28047519-28047538 None:intergenic 45.0%
ATAGCCACCAATATCCACCA+TGG - Chr7:28050380-28050399 None:intergenic 45.0%
ATTACCATACTGCTACCCTG+TGG - Chr7:28050475-28050494 None:intergenic 45.0%
ATTCCTAAGGACCTCCAGAA+GGG - Chr7:28049084-28049103 None:intergenic 45.0%
CAAATGCCATGCATAGACCT+AGG + Chr7:28051617-28051636 MsG0780037542.01.T01:three_prime_UTR 45.0%
CAAGCATCCTCTCCAAAAGA+TGG + Chr7:28047467-28047486 MsG0780037542.01.T01:five_prime_UTR 45.0%
CCCACTGGATATCAATCGAT+TGG + Chr7:28047651-28047670 MsG0780037542.01.T01:CDS 45.0%
CCCATACCCTATACTAGCAT+AGG - Chr7:28050843-28050862 None:intergenic 45.0%
CCTACTCAAAACTCTCCGAT+TGG + Chr7:28047855-28047874 MsG0780037542.01.T01:CDS 45.0%
CTCAAATGTGGTGCCTCTAA+GGG + Chr7:28047622-28047641 MsG0780037542.01.T01:CDS 45.0%
GAATGTGAGCGAGCTTACAA+TGG + Chr7:28050281-28050300 MsG0780037542.01.T01:intron 45.0%
GCCTATGCTAGTATAGGGTA+TGG + Chr7:28050839-28050858 MsG0780037542.01.T01:intron 45.0%
GCCTTCAAATCATCGAGAGT+CGG - Chr7:28051537-28051556 None:intergenic 45.0%
GCTAGGCCTATGCTAGTATA+GGG + Chr7:28050834-28050853 MsG0780037542.01.T01:intron 45.0%
GGTATTTAGGCGTGTTCTAG+AGG + Chr7:28048961-28048980 MsG0780037542.01.T01:intron 45.0%
GTCATGGTCGTCGAAATCAA+GGG - Chr7:28047518-28047537 None:intergenic 45.0%
GTTTGGTAGGGAGAAAAGAG+AGG - Chr7:28047435-28047454 None:intergenic 45.0%
TAGGGAGAAAAGAGAGGATG+TGG - Chr7:28047429-28047448 None:intergenic 45.0%
TATTCCTAAGGACCTCCAGA+AGG - Chr7:28049085-28049104 None:intergenic 45.0%
TCAAATCATCGAGAGTCGGT+CGG - Chr7:28051533-28051552 None:intergenic 45.0%
TCAGCCGATATTTACCATGG+GGG - Chr7:28050414-28050433 None:intergenic 45.0%
TCCGCCATAATCCTCTATGA+CGG + Chr7:28050447-28050466 MsG0780037542.01.T01:intron 45.0%
TCTTCTCCTAGGTCTATGCA+TGG - Chr7:28051626-28051645 None:intergenic 45.0%
TGAAGTTAAATCCCCTGGAG+AGG - Chr7:28048592-28048611 None:intergenic 45.0%
TGCTAGGCCTATGCTAGTAT+AGG + Chr7:28050833-28050852 MsG0780037542.01.T01:intron 45.0%
TGTCATTGTGCGCAGTAAGT+TGG - Chr7:28048562-28048581 None:intergenic 45.0%
TTCTAGCAACCACTCCCATT+TGG - Chr7:28048264-28048283 None:intergenic 45.0%
TTGCGGCAGATTGTTTGGTA+GGG - Chr7:28047447-28047466 None:intergenic 45.0%
! ACCGACTCTCGATGATTTGA+AGG + Chr7:28051533-28051552 MsG0780037542.01.T01:three_prime_UTR 45.0%
! ATGCCTTTAGAGGCTCTCAA+GGG + Chr7:28048873-28048892 MsG0780037542.01.T01:intron 45.0%
! ATTTTTCCGCTCCGCTATAG+CGG - Chr7:28049657-28049676 None:intergenic 45.0%
! TATTGACCAAGTGTTGCCGA+TGG - Chr7:28050557-28050576 None:intergenic 45.0%
! TTTGGAGAGGATGCTTGTTG+CGG - Chr7:28047464-28047483 None:intergenic 45.0%
! TTTTTGAATGTCGGCCATGG+TGG + Chr7:28050363-28050382 MsG0780037542.01.T01:intron 45.0%
!! GTGGATTCCATCTTTTGGAG+AGG - Chr7:28047477-28047496 None:intergenic 45.0%
!! GTGTTTTTGAATGTCGGCCA+TGG + Chr7:28050360-28050379 MsG0780037542.01.T01:intron 45.0%
!!! CCAATCGGAGAGTTTTGAGT+AGG - Chr7:28047858-28047877 None:intergenic 45.0%
AAAATCAAGACCACCGCACC+AGG + Chr7:28049672-28049691 MsG0780037542.01.T01:intron 50.0%
AAGATTGAAGGGGCAAGGTG+GGG - Chr7:28047597-28047616 None:intergenic 50.0%
AGAGGGTCTAAAAGCCCTTC+TGG + Chr7:28049067-28049086 MsG0780037542.01.T01:intron 50.0%
ATACTCGCTACGCTGTTGCA+TGG - Chr7:28048180-28048199 None:intergenic 50.0%
ATGACAGTTAGTGCCTCTCC+AGG + Chr7:28048576-28048595 MsG0780037542.01.T01:CDS 50.0%
ATGGTCGTCGAAATCAAGGG+TGG - Chr7:28047515-28047534 None:intergenic 50.0%
ATTGGCGTACCAAATGGGAG+TGG + Chr7:28048252-28048271 MsG0780037542.01.T01:CDS 50.0%
CAACCCTTGAGAGCCTCTAA+AGG - Chr7:28048879-28048898 None:intergenic 50.0%
CACGTGTCAGAAGTGGAAAG+CGG + Chr7:28049724-28049743 MsG0780037542.01.T01:intron 50.0%
CCTCAAATGTGGTGCCTCTA+AGG + Chr7:28047621-28047640 MsG0780037542.01.T01:CDS 50.0%
CTCGCCCCCATGGTAAATAT+CGG + Chr7:28050407-28050426 MsG0780037542.01.T01:intron 50.0%
CTGCCTGACAGCAATAAGCA+TGG - Chr7:28049208-28049227 None:intergenic 50.0%
GAAAGATTGAAGGGGCAAGG+TGG - Chr7:28047599-28047618 None:intergenic 50.0%
GACCAACCCAATAATTGGCG+CGG - Chr7:28050010-28050029 None:intergenic 50.0%
GAGCCAAAATCCCACCATAC+CGG - Chr7:28050523-28050542 None:intergenic 50.0%
GCCGTCATAGAGGATTATGG+CGG - Chr7:28050451-28050470 None:intergenic 50.0%
GGACTTTGGGCCTTTCTGAA+GGG + Chr7:28049030-28049049 MsG0780037542.01.T01:intron 50.0%
GGCCTAAAACAGTTGAGGGT+TGG + Chr7:28050670-28050689 MsG0780037542.01.T01:intron 50.0%
GTGGAAAGATTGAAGGGGCA+AGG - Chr7:28047602-28047621 None:intergenic 50.0%
GTTGCGGCAGATTGTTTGGT+AGG - Chr7:28047448-28047467 None:intergenic 50.0%
TACTCGCTACGCTGTTGCAT+GGG - Chr7:28048179-28048198 None:intergenic 50.0%
TCACTTGCAGGCATGCACAA+AGG - Chr7:28050904-28050923 None:intergenic 50.0%
TGACAGTTAGTGCCTCTCCA+GGG + Chr7:28048577-28048596 MsG0780037542.01.T01:CDS 50.0%
TGGTCGTCGAAATCAAGGGT+GGG - Chr7:28047514-28047533 None:intergenic 50.0%
! AATGTGGTGCCTCTAAGGGA+TGG + Chr7:28047626-28047645 MsG0780037542.01.T01:CDS 50.0%
! ATGTGGTGCCTCTAAGGGAT+GGG + Chr7:28047627-28047646 MsG0780037542.01.T01:CDS 50.0%
! CATGCCTTTAGAGGCTCTCA+AGG + Chr7:28048872-28048891 MsG0780037542.01.T01:intron 50.0%
! GCTTGTTGCGGCAGATTGTT+TGG - Chr7:28047452-28047471 None:intergenic 50.0%
! GGTGCCGTCATAGAGGATTA+TGG - Chr7:28050454-28050473 None:intergenic 50.0%
! TGTCTTTTCGCTCGCTCACA+CGG + Chr7:28049593-28049612 MsG0780037542.01.T01:intron 50.0%
!! ATGTCGGCCATGGTGGATAT+TGG + Chr7:28050370-28050389 MsG0780037542.01.T01:intron 50.0%
!! CCTTAGAGGCACCACATTTG+AGG - Chr7:28047624-28047643 None:intergenic 50.0%
!! TAGAGGCACCACATTTGAGG+TGG - Chr7:28047621-28047640 None:intergenic 50.0%
ATCCTCTATGACGGCACCAC+AGG + Chr7:28050456-28050475 MsG0780037542.01.T01:intron 55.0%
CAGAAAGGCCCAAAGTCCCA+AGG - Chr7:28049028-28049047 None:intergenic 55.0%
CATCCACCATCGGCAACACT+TGG + Chr7:28050548-28050567 MsG0780037542.01.T01:intron 55.0%
CTGGGAAGCTGTGTGTGTGT+TGG + Chr7:28051109-28051128 MsG0780037542.01.T01:intron 55.0%
GAAGTGGAAAGCGGCCAAAG+CGG + Chr7:28049733-28049752 MsG0780037542.01.T01:intron 55.0%
GACAGTTAGTGCCTCTCCAG+GGG + Chr7:28048578-28048597 MsG0780037542.01.T01:CDS 55.0%
GACCAACCCAACAATTGGCG+CGG - Chr7:28049984-28050003 None:intergenic 55.0%
GGCGCGACCAACCCAATAAT+TGG - Chr7:28050015-28050034 None:intergenic 55.0%
GGGACTTTGGGCCTTTCTGA+AGG + Chr7:28049029-28049048 MsG0780037542.01.T01:intron 55.0%
GGGTCTAAAAGCCCTTCTGG+AGG + Chr7:28049070-28049089 MsG0780037542.01.T01:intron 55.0%
GTCAATGCGAAAATGCGGCG+CGG - Chr7:28050036-28050055 None:intergenic 55.0%
GTGGGAACTGAGAGCCATAG+TGG - Chr7:28047496-28047515 None:intergenic 55.0%
TCCTCTATGACGGCACCACA+AGG + Chr7:28050457-28050476 MsG0780037542.01.T01:intron 55.0%
TCCTCTATGACGGCACCACA+GGG + Chr7:28050457-28050476 MsG0780037542.01.T01:intron 55.0%
TCTATGACGGCACCACAAGG+CGG + Chr7:28050497-28050516 MsG0780037542.01.T01:intron 55.0%
! AAGCCCTTCTGGAGGTCCTT+AGG + Chr7:28049078-28049097 MsG0780037542.01.T01:intron 55.0%
! GGGCTTTTAGACCCTCTCAG+AGG - Chr7:28049064-28049083 None:intergenic 55.0%
! GTCTTTTCGCTCGCTCACAC+GGG + Chr7:28049594-28049613 MsG0780037542.01.T01:intron 55.0%
! TCTTTTCGCTCGCTCACACG+GGG + Chr7:28049595-28049614 MsG0780037542.01.T01:intron 55.0%
! TGACCAAGTGTTGCCGATGG+TGG - Chr7:28050554-28050573 None:intergenic 55.0%
!! CAAGTGTTGCCGATGGTGGA+TGG - Chr7:28050550-28050569 None:intergenic 55.0%
!! GTGTCCCGTTCTAGAGGAGT+TGG + Chr7:28047921-28047940 MsG0780037542.01.T01:CDS 55.0%
!! TCGGCCATGGTGGATATTGG+TGG + Chr7:28050373-28050392 MsG0780037542.01.T01:intron 55.0%
!!! TATTTTTGGGCTCGCCCCCA+TGG + Chr7:28050397-28050416 MsG0780037542.01.T01:intron 55.0%
ACCCAACAATTGGCGCGGTG+CGG - Chr7:28049979-28049998 None:intergenic 60.0%
AGGCCACATCGGTGCGTTTC+AGG + Chr7:28049692-28049711 MsG0780037542.01.T01:intron 60.0%
AGGGCGCACCTTGGGACTTT+GGG + Chr7:28049017-28049036 MsG0780037542.01.T01:intron 60.0%
CACCGCGCCAATTGTTGGGT+TGG + Chr7:28049979-28049998 MsG0780037542.01.T01:intron 60.0%
CAGTGGGTCCCATCCCTTAG+AGG - Chr7:28047638-28047657 None:intergenic 60.0%
CGCCGCGCCAATTATTGGGT+TGG + Chr7:28050005-28050024 MsG0780037542.01.T01:intron 60.0%
GGACTCAGCGCCCTTCAGAA+AGG - Chr7:28049043-28049062 None:intergenic 60.0%
GGCACCACAGGGTAGCAGTA+TGG + Chr7:28050468-28050487 MsG0780037542.01.T01:intron 60.0%
GGCGCGACCAACCCAACAAT+TGG - Chr7:28049989-28050008 None:intergenic 60.0%
GTCGCGCCGCGCCAATTATT+GGG + Chr7:28050001-28050020 MsG0780037542.01.T01:intron 60.0%
GTTCGCGCTGCTGTGCAAAG+AGG + Chr7:28047673-28047692 MsG0780037542.01.T01:CDS 60.0%
GTTGTCAAAAGCAGCCGCGC+CGG + Chr7:28049631-28049650 MsG0780037542.01.T01:intron 60.0%
TTACATGTCGGAGAGCCCCG+TGG - Chr7:28048648-28048667 None:intergenic 60.0%
! ACTTCTGACACGTGCCGACG+CGG - Chr7:28049718-28049737 None:intergenic 60.0%
! CTCTAAGGGATGGGACCCAC+TGG + Chr7:28047636-28047655 MsG0780037542.01.T01:CDS 60.0%
! CTTTTCGCTCGCTCACACGG+GGG + Chr7:28049596-28049615 MsG0780037542.01.T01:intron 60.0%
! TGAAACGCACCGATGTGGCC+TGG - Chr7:28049693-28049712 None:intergenic 60.0%
!! ACCCTGTGGTGCCGTCATAG+AGG - Chr7:28050461-28050480 None:intergenic 60.0%
!! CGGCCGGTATGGTGGGATTT+TGG + Chr7:28050517-28050536 MsG0780037542.01.T01:intron 60.0%
!! GCACGTAGCGGGCGCTATTT+CGG - Chr7:28049949-28049968 None:intergenic 60.0%
!! GCCTTGTGGTGCCGTCATAG+AGG - Chr7:28050498-28050517 None:intergenic 60.0%
!! GTGTTGCCGATGGTGGATGG+CGG - Chr7:28050547-28050566 None:intergenic 60.0%
!! TGTTGCCGATGGTGGATGGC+GGG - Chr7:28050546-28050565 None:intergenic 60.0%
AAGGGGCAAGGTGGGGTCAC+GGG - Chr7:28047590-28047609 None:intergenic 65.0%
ACCACCGCACCAGGCCACAT+CGG + Chr7:28049681-28049700 MsG0780037542.01.T01:intron 65.0%
CACAAGGCGGCCGGTATGGT+GGG + Chr7:28050510-28050529 MsG0780037542.01.T01:intron 65.0%
CCCAACAATTGGCGCGGTGC+GGG - Chr7:28049978-28049997 None:intergenic 65.0%
CCCGCACCGCGCCAATTGTT+GGG + Chr7:28049975-28049994 MsG0780037542.01.T01:intron 65.0%
GAAGGGGCAAGGTGGGGTCA+CGG - Chr7:28047591-28047610 None:intergenic 65.0%
GGTCGCGCCGCGCCAATTAT+TGG + Chr7:28050000-28050019 MsG0780037542.01.T01:intron 65.0%
TCCCGCACCGCGCCAATTGT+TGG + Chr7:28049974-28049993 MsG0780037542.01.T01:intron 65.0%
TTCCGCTCCGCTATAGCGGC+CGG - Chr7:28049653-28049672 None:intergenic 65.0%
! CGGCCTGAAACGCACCGATG+TGG - Chr7:28049698-28049717 None:intergenic 65.0%
! CGGGCGCTATTTCGGTGGTG+CGG - Chr7:28049941-28049960 None:intergenic 65.0%
! GAGGGCGCACCTTGGGACTT+TGG + Chr7:28049016-28049035 MsG0780037542.01.T01:intron 65.0%
! GCGTCGGCACGTGTCAGAAG+TGG + Chr7:28049717-28049736 MsG0780037542.01.T01:intron 65.0%
!! AGGGCGCTGAGTCCTCTGAG+AGG + Chr7:28049049-28049068 MsG0780037542.01.T01:intron 65.0%
!! CGAGGGGTGTCCCGTTCTAG+AGG + Chr7:28047915-28047934 MsG0780037542.01.T01:CDS 65.0%
!! CGTAGCGGGCGCTATTTCGG+TGG - Chr7:28049946-28049965 None:intergenic 65.0%
!! GGGCGCTGAGTCCTCTGAGA+GGG + Chr7:28049050-28049069 MsG0780037542.01.T01:intron 65.0%
!! GTTGCCGATGGTGGATGGCG+GGG - Chr7:28050545-28050564 None:intergenic 65.0%
AATTGGCGCGGTGCGGGAGC+GGG - Chr7:28049972-28049991 None:intergenic 70.0%
ACCGATGTGGCCTGGTGCGG+TGG - Chr7:28049685-28049704 None:intergenic 70.0%
AGCCATAAGAGGCGGCGCCC+TGG + Chr7:28048992-28049011 MsG0780037542.01.T01:intron 70.0%
CAATTGGCGCGGTGCGGGAG+CGG - Chr7:28049973-28049992 None:intergenic 70.0%
CCACAAGGCGGCCGGTATGG+TGG + Chr7:28050509-28050528 MsG0780037542.01.T01:intron 70.0%
CCACCATACCGGCCGCCTTG+TGG - Chr7:28050512-28050531 None:intergenic 70.0%
CCATAAGAGGCGGCGCCCTG+GGG + Chr7:28048994-28049013 MsG0780037542.01.T01:intron 70.0%
CGGTGCGTTTCAGGCCGCGT+CGG + Chr7:28049701-28049720 MsG0780037542.01.T01:intron 70.0%
GCACCACAAGGCGGCCGGTA+TGG + Chr7:28050506-28050525 MsG0780037542.01.T01:intron 70.0%
GCCATAAGAGGCGGCGCCCT+GGG + Chr7:28048993-28049012 MsG0780037542.01.T01:intron 70.0%
GGCTCCCCGCCATCCACCAT+CGG + Chr7:28050538-28050557 MsG0780037542.01.T01:intron 70.0%
GGTGGGGTCACGGGAGAGCA+TGG - Chr7:28047581-28047600 None:intergenic 70.0%
TGACGGCACCACAAGGCGGC+CGG + Chr7:28050501-28050520 MsG0780037542.01.T01:intron 70.0%
! CGCACCGATGTGGCCTGGTG+CGG - Chr7:28049688-28049707 None:intergenic 70.0%
! GCTCGCTCACACGGGGGCAT+AGG + Chr7:28049602-28049621 MsG0780037542.01.T01:intron 70.0%
AAGAGGCGGCGCCCTGGGGA+GGG + Chr7:28048998-28049017 MsG0780037542.01.T01:intron 75.0%
ATTGGCGCGGTGCGGGAGCG+GGG - Chr7:28049971-28049990 None:intergenic 75.0%
CCCAAGGTGCGCCCTCCCCA+GGG - Chr7:28049012-28049031 None:intergenic 75.0%
CTCCGCTATAGCGGCCGGCG+CGG - Chr7:28049648-28049667 None:intergenic 75.0%
TAAGAGGCGGCGCCCTGGGG+AGG + Chr7:28048997-28049016 MsG0780037542.01.T01:intron 75.0%
TCCCAAGGTGCGCCCTCCCC+AGG - Chr7:28049013-28049032 None:intergenic 75.0%
TGCGGGAGCGGGGCACGTAG+CGG - Chr7:28049961-28049980 None:intergenic 75.0%
! AGCCGCGCCGGCCGCTATAG+CGG + Chr7:28049643-28049662 MsG0780037542.01.T01:intron 75.0%
! CCCTGGGGAGGGCGCACCTT+GGG + Chr7:28049009-28049028 MsG0780037542.01.T01:intron 75.0%
! CGCCGGCCGCTATAGCGGAG+CGG + Chr7:28049648-28049667 MsG0780037542.01.T01:intron 75.0%
!! CCCCAGGGCGCCGCCTCTTA+TGG - Chr7:28048997-28049016 None:intergenic 75.0%
! GCGGGAGCGGGGCACGTAGC+GGG - Chr7:28049960-28049979 None:intergenic 80.0%
!! GCCCTGGGGAGGGCGCACCT+TGG + Chr7:28049008-28049027 MsG0780037542.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 28047372 28051896 28047372 ID=MsG0780037542.01;Name=MsG0780037542.01
Chr7 mRNA 28047372 28051896 28047372 ID=MsG0780037542.01.T01;Parent=MsG0780037542.01;Name=MsG0780037542.01.T01;_AED=0.47;_eAED=0.47;_QI=208|1|1|1|0.66|0.5|4|468|309
Chr7 exon 28051438 28051896 28051438 ID=MsG0780037542.01.T01:exon:4948;Parent=MsG0780037542.01.T01
Chr7 exon 28048411 28048692 28048411 ID=MsG0780037542.01.T01:exon:4947;Parent=MsG0780037542.01.T01
Chr7 exon 28048188 28048328 28048188 ID=MsG0780037542.01.T01:exon:4946;Parent=MsG0780037542.01.T01
Chr7 exon 28047372 28048095 28047372 ID=MsG0780037542.01.T01:exon:4945;Parent=MsG0780037542.01.T01
Chr7 five_prime_UTR 28047372 28047579 28047372 ID=MsG0780037542.01.T01:five_prime_utr;Parent=MsG0780037542.01.T01
Chr7 CDS 28047580 28048095 28047580 ID=MsG0780037542.01.T01:cds;Parent=MsG0780037542.01.T01
Chr7 CDS 28048188 28048328 28048188 ID=MsG0780037542.01.T01:cds;Parent=MsG0780037542.01.T01
Chr7 CDS 28048411 28048683 28048411 ID=MsG0780037542.01.T01:cds;Parent=MsG0780037542.01.T01
Chr7 three_prime_UTR 28048684 28048692 28048684 ID=MsG0780037542.01.T01:three_prime_utr;Parent=MsG0780037542.01.T01
Chr7 three_prime_UTR 28051438 28051896 28051438 ID=MsG0780037542.01.T01:three_prime_utr;Parent=MsG0780037542.01.T01
Gene Sequence

>MsG0780037542.01.T01

ATGCTCTCCCGTGACCCCACCTTGCCCCTTCAATCTTTCCACCTCAAATGTGGTGCCTCTAAGGGATGGGACCCACTGGATATCAATCGATTGGTTCGCGCTGCTGTGCAAAGAGGAACTCAGAATTTCATCCTGGATTTGAGTAAAACTGTTAGAGCATTGCAAAACGAAAACAAATTAGGTCCTACAGTTTCCACAATTTTCAATTCTAGAAACCTTGTTGTTCTTAAGTTGAAAACATTACTAGTGAATGTTCTTCCTCAAATCGATTTTCCCCTACTCAAAACTCTCCGATTGGAAAAGGTTGCGATTCTAAAAGATTTTGATAAGCTTATCGAGGGGTGTCCCGTTCTAGAGGAGTTGGAAATAACTTCTTTACTATGTATGCATTTGAAAGATGGTATTGGAGAGTTTAAACACTTGCCCAATTTGGTCAGAGCAAACATTTCTCAATTTGTTCCACGAAATATTCAATTTGCTTGGATTTGCAATGCAAAGTTTTTGCGTTTAGAAGTGCGTAGCGAGTATCAAGTTCACACTTTTCATAACTTAACTCACATGGAGCTTATATTCAAATCAAATTGGCGTACCAAATGGGAGTGGTTGCTAGAAATGTTGAAGAATTGCCCTAAACTTCAAAATCTTACCCTTCACAAGCTTTATGGACATGGTATTGATGACGATGATTGGAATGAACCACAAATTGTTCCAAAATGTCTTTCTTCTCAACTAAGAACATGCTCGCTTAGAGATTACAAAGGCATGAAGTGTGAGCTTCAGTTTGCAGAGTATGTTTTGAAGAATGCCAACTTACTGCGCACAATGACAGTTAGTGCCTCTCCAGGGGATTTAACTTCAAAGTACCAAATGCTAATGGATTTATCTTTGTGTCCACGGGGCTCTCCGACATGTAAACTTTCATTCATTTGA
Protein sequence

>MsG0780037542.01.T01

MLSRDPTLPLQSFHLKCGASKGWDPLDINRLVRAAVQRGTQNFILDLSKTVRALQNENKLGPTVSTIFNSRNLVVLKLKTLLVNVLPQIDFPLLKTLRLEKVAILKDFDKLIEGCPVLEELEITSLLCMHLKDGIGEFKHLPNLVRANISQFVPRNIQFAWICNAKFLRLEVRSEYQVHTFHNLTHMELIFKSNWRTKWEWLLEMLKNCPKLQNLTLHKLYGHGIDDDDWNEPQIVPKCLSSQLRTCSLRDYKGMKCELQFAEYVLKNANLLRTMTVSASPGDLTSKYQMLMDLSLCPRGSPTCKLSFI*