AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017513.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017513.01.T01 MTR_3g108150 86.765 340 31 1 1 326 1 340 0.0 595
MsG0380017513.01.T01 MTR_7g088260 55.655 336 129 7 8 327 86 417 1.24e-114 341
MsG0380017513.01.T01 MTR_0492s0020 49.854 343 132 9 6 326 79 403 6.34e-94 287
MsG0380017513.01.T01 MTR_0492s0020 76.364 55 12 1 6 60 6 59 4.51e-19 88.6
MsG0380017513.01.T01 MTR_0543s0010 49.854 343 132 9 6 326 79 403 2.30e-93 286
MsG0380017513.01.T01 MTR_0543s0010 76.364 55 12 1 6 60 6 59 5.38e-19 88.2
MsG0380017513.01.T01 MTR_3g108560 47.904 334 154 6 8 326 14 342 1.74e-87 269
MsG0380017513.01.T01 MTR_3g108560 47.751 289 132 5 8 281 14 298 1.32e-72 228
MsG0380017513.01.T01 MTR_1g041245 41.176 340 174 6 8 326 6 340 7.14e-66 213
MsG0380017513.01.T01 MTR_7g033915 40.286 350 156 10 8 333 6 326 1.95e-64 209
MsG0380017513.01.T01 MTR_7g034115 42.982 342 162 9 8 326 6 337 6.81e-63 206
MsG0380017513.01.T01 MTR_7g033990 42.373 354 161 13 8 333 6 344 2.10e-62 205
MsG0380017513.01.T01 MTR_7g032380 40.426 329 166 9 6 326 4 310 7.51e-62 202
MsG0380017513.01.T01 MTR_7g115270 37.746 355 183 9 6 326 5 355 6.89e-61 201
MsG0380017513.01.T01 MTR_3g036250 38.154 325 184 6 13 326 5 323 8.41e-60 197
MsG0380017513.01.T01 MTR_7g098570 40.000 335 170 10 13 325 20 345 2.56e-59 199
MsG0380017513.01.T01 MTR_3g040700 38.123 341 185 9 1 326 31 360 2.17e-58 195
MsG0380017513.01.T01 MTR_7g098510 37.538 333 183 6 13 326 18 344 2.85e-58 194
MsG0380017513.01.T01 MTR_3g109982 56.915 188 76 3 6 190 6 191 6.69e-58 201
MsG0380017513.01.T01 MTR_3g109982 49.099 222 85 7 123 325 215 427 2.03e-46 169
MsG0380017513.01.T01 MTR_3g110010 56.915 188 76 3 6 190 6 191 7.40e-58 200
MsG0380017513.01.T01 MTR_3g110010 42.130 216 88 8 123 309 215 422 2.88e-30 122
MsG0380017513.01.T01 MTR_3g023630 37.537 341 193 9 9 334 4 339 1.76e-56 189
MsG0380017513.01.T01 MTR_7g056020 42.229 341 156 10 7 326 7 327 2.29e-56 194
MsG0380017513.01.T01 MTR_7g098480 38.438 333 176 7 13 325 18 341 9.32e-56 189
MsG0380017513.01.T01 MTR_3g087260 42.446 278 133 5 12 282 11 268 2.09e-54 185
MsG0380017513.01.T01 MTR_3g087260 47.280 239 91 10 110 326 185 410 6.71e-42 152
MsG0380017513.01.T01 MTR_7g034110 38.938 339 159 8 8 336 6 306 1.94e-53 180
MsG0380017513.01.T01 MTR_7g056433 36.628 344 186 10 8 325 4 341 5.58e-53 180
MsG0380017513.01.T01 MTR_7g032370 38.050 318 168 7 25 326 2 306 4.92e-51 174
MsG0380017513.01.T01 MTR_7g114710 35.866 329 185 5 8 326 8 320 2.28e-46 162
MsG0380017513.01.T01 MTR_7g056420 36.585 328 186 7 8 326 4 318 3.61e-45 166
MsG0380017513.01.T01 MTR_7g056430 36.585 328 186 7 8 326 4 318 4.79e-45 166
MsG0380017513.01.T01 MTR_3g107120 35.714 350 177 10 11 322 7 346 3.74e-44 157
MsG0380017513.01.T01 MTR_3g082890 35.674 356 183 13 9 325 91 439 1.23e-43 157
MsG0380017513.01.T01 MTR_8g085430 34.503 342 154 9 10 338 8 292 1.33e-43 154
MsG0380017513.01.T01 MTR_3g105060 36.119 335 185 7 8 326 9 330 1.66e-43 154
MsG0380017513.01.T01 MTR_7g056447 41.463 246 127 7 8 246 4 239 3.15e-42 149
MsG0380017513.01.T01 MTR_7g034120 38.652 282 136 9 79 335 4 273 8.70e-42 148
MsG0380017513.01.T01 MTR_7g033945 50.000 166 74 2 8 164 6 171 6.64e-41 142
MsG0380017513.01.T01 MTR_4g134150 39.648 227 122 5 5 223 6 225 1.23e-39 140
MsG0380017513.01.T01 MTR_3g467400 34.582 347 163 13 13 325 3 319 1.55e-39 144
MsG0380017513.01.T01 MTR_5g073420 31.594 345 202 11 13 337 11 341 4.84e-39 143
MsG0380017513.01.T01 MTR_4g080610 37.092 337 148 12 15 326 14 311 6.72e-39 142
MsG0380017513.01.T01 MTR_3g082890 33.079 393 180 14 9 325 11 396 7.19e-39 144
MsG0380017513.01.T01 MTR_5g012840 36.137 321 158 10 37 349 13 294 1.42e-38 140
MsG0380017513.01.T01 MTR_5g008920 32.440 336 190 7 15 326 14 336 1.87e-38 141
MsG0380017513.01.T01 MTR_3g107100 32.277 347 191 10 11 326 9 342 2.41e-38 142
MsG0380017513.01.T01 MTR_7g026500 32.804 378 216 15 10 355 11 382 1.89e-37 139
MsG0380017513.01.T01 MTR_6g040270 33.832 334 185 10 15 325 10 330 9.94e-37 137
MsG0380017513.01.T01 MTR_3g107160 32.464 345 190 9 13 326 10 342 3.09e-36 135
MsG0380017513.01.T01 MTR_1g066830 31.014 345 194 10 13 326 8 339 9.34e-36 134
MsG0380017513.01.T01 MTR_6g022500 32.249 338 196 8 13 326 101 429 8.45e-35 133
MsG0380017513.01.T01 MTR_1g085120 31.395 344 197 10 12 326 91 424 1.16e-34 133
MsG0380017513.01.T01 MTR_1g085120 31.395 344 197 10 12 326 166 499 3.17e-34 132
MsG0380017513.01.T01 MTR_7g007080 32.164 342 183 10 11 317 2 329 1.18e-33 129
MsG0380017513.01.T01 MTR_5g008950 31.909 351 191 11 15 337 1 331 1.77e-33 128
MsG0380017513.01.T01 MTR_7g060470 31.956 363 180 14 12 326 2 345 5.31e-33 127
MsG0380017513.01.T01 MTR_6g011460 30.769 338 198 9 13 326 46 371 8.68e-33 127
MsG0380017513.01.T01 MTR_6g044560 31.412 347 183 8 4 312 169 498 1.55e-32 128
MsG0380017513.01.T01 MTR_7g007340 31.111 360 184 11 1 334 1 322 1.56e-32 125
MsG0380017513.01.T01 MTR_5g058100 32.948 346 184 11 8 322 4 332 2.05e-32 125
MsG0380017513.01.T01 MTR_6g044572 31.361 338 177 8 13 312 2 322 2.13e-32 125
MsG0380017513.01.T01 MTR_7g056277 30.532 357 193 11 12 336 258 591 1.06e-31 126
MsG0380017513.01.T01 MTR_4g039440 29.915 351 209 9 2 326 23 362 1.11e-31 124
MsG0380017513.01.T01 MTR_7g056287 30.252 357 194 11 12 336 2 335 1.79e-31 122
MsG0380017513.01.T01 MTR_2g007500 31.657 338 179 10 13 317 14 332 3.37e-31 120
MsG0380017513.01.T01 MTR_1089s0010 33.333 330 178 10 13 317 8 320 4.30e-31 121
MsG0380017513.01.T01 MTR_7g033940 54.701 117 47 2 15 126 96 211 9.04e-31 117
MsG0380017513.01.T01 MTR_2g007450 30.811 370 193 15 13 326 16 378 1.34e-30 121
MsG0380017513.01.T01 MTR_3g071850 29.189 370 217 12 13 342 24 388 2.35e-30 122
MsG0380017513.01.T01 MTR_1g107385 31.806 371 185 16 8 326 27 381 2.39e-30 120
MsG0380017513.01.T01 MTR_6g045333 30.189 371 212 12 13 342 61 425 2.32e-29 117
MsG0380017513.01.T01 MTR_5g073370 31.722 331 188 9 9 312 1 320 5.81e-29 115
MsG0380017513.01.T01 MTR_4g098590 31.073 354 188 15 15 326 1 340 6.17e-29 115
MsG0380017513.01.T01 MTR_7g075820 29.345 351 195 10 10 318 3 342 1.01e-28 115
MsG0380017513.01.T01 MTR_5g007410 29.855 345 196 12 15 325 28 360 2.05e-28 115
MsG0380017513.01.T01 MTR_1g108820 31.564 358 190 16 10 331 5 343 1.37e-27 112
MsG0380017513.01.T01 MTR_5g013500 30.904 343 168 15 9 319 5 310 1.48e-27 111
MsG0380017513.01.T01 MTR_5g058000 33.535 331 174 12 13 317 8 318 1.81e-27 111
MsG0380017513.01.T01 MTR_1g085120 32.107 299 167 9 12 281 178 469 7.61e-27 111
MsG0380017513.01.T01 MTR_3g099830 29.412 340 186 9 5 315 4 318 9.27e-27 109
MsG0380017513.01.T01 MTR_7g083740 27.139 339 196 9 10 326 14 323 1.33e-26 109
MsG0380017513.01.T01 MTR_2g005990 29.570 372 182 17 13 327 6 354 1.58e-26 109
MsG0380017513.01.T01 MTR_5g073340 31.288 326 178 10 13 317 8 308 2.02e-26 107
MsG0380017513.01.T01 MTR_7g055943 30.704 355 201 13 13 337 40 379 2.21e-26 109
MsG0380017513.01.T01 MTR_6g022360 31.672 341 184 11 13 326 43 361 2.85e-26 108
MsG0380017513.01.T01 MTR_1g053025 29.050 358 200 11 13 327 2 348 7.98e-26 107
MsG0380017513.01.T01 MTR_5g045170 30.814 344 189 13 15 325 16 343 1.27e-25 107
MsG0380017513.01.T01 MTR_3g114200 45.139 144 70 4 8 143 10 152 1.51e-25 101
MsG0380017513.01.T01 MTR_5g083890 29.973 367 174 11 10 315 3 347 1.73e-25 107
MsG0380017513.01.T01 MTR_5g061680 31.579 304 178 10 13 307 11 293 2.52e-25 104
MsG0380017513.01.T01 MTR_7g022105 28.533 368 194 12 2 326 38 379 1.42e-24 104
MsG0380017513.01.T01 MTR_2g008310 29.518 332 188 11 13 315 2 316 1.47e-24 103
MsG0380017513.01.T01 MTR_2g036470 28.779 344 205 9 13 325 14 348 1.90e-24 103
MsG0380017513.01.T01 MTR_2g007400 30.000 350 184 14 13 315 12 347 2.36e-24 103
MsG0380017513.01.T01 MTR_5g045510 28.367 349 197 11 4 325 2 324 3.44e-24 102
MsG0380017513.01.T01 MTR_2g008320 28.824 340 185 11 13 315 52 371 1.62e-23 101
MsG0380017513.01.T01 MTR_5g039450 28.531 354 184 11 13 327 6 329 1.97e-23 100
MsG0380017513.01.T01 MTR_5g084070 30.184 381 186 14 13 326 13 380 2.00e-23 100
MsG0380017513.01.T01 MTR_8g077460 30.994 342 188 16 12 326 9 329 2.38e-23 100
MsG0380017513.01.T01 MTR_2g007360 30.447 358 155 16 6 315 5 316 7.42e-23 98.6
MsG0380017513.01.T01 MTR_0009s0080 29.971 347 193 14 15 325 20 352 8.60e-23 99.4
MsG0380017513.01.T01 MTR_7g021990 28.804 368 193 12 2 326 37 378 1.07e-22 99.0
MsG0380017513.01.T01 MTR_8g468810 28.256 407 194 13 6 325 18 413 1.35e-22 99.0
MsG0380017513.01.T01 MTR_7g021950 28.804 368 193 12 2 326 37 378 2.14e-22 98.6
MsG0380017513.01.T01 MTR_1g108800 33.531 337 158 14 10 326 5 295 7.67e-22 95.5
MsG0380017513.01.T01 MTR_7g034090 30.904 343 149 11 12 334 3 277 1.47e-21 95.5
MsG0380017513.01.T01 MTR_5g031970 29.819 332 197 12 2 325 5 308 6.75e-21 92.8
MsG0380017513.01.T01 MTR_3g026920 27.520 367 180 12 8 313 14 355 3.72e-20 91.3
MsG0380017513.01.T01 MTR_4g032730 32.530 332 170 16 11 307 13 325 5.29e-20 91.3
MsG0380017513.01.T01 MTR_1g095750 49.485 97 43 2 8 98 41 137 5.47e-20 85.5
MsG0380017513.01.T01 MTR_8g467800 27.525 396 197 13 12 324 19 407 1.19e-19 90.1
MsG0380017513.01.T01 MTR_5g063950 27.083 336 193 13 13 325 8 314 1.29e-19 89.4
MsG0380017513.01.T01 MTR_1g108820 32.026 306 163 13 10 281 5 299 5.82e-19 87.4
MsG0380017513.01.T01 MTR_2g020170 45.763 118 56 4 4 114 13 129 5.99e-19 82.8
MsG0380017513.01.T01 MTR_8g014160 30.141 355 185 16 12 322 40 375 1.75e-18 86.7
MsG0380017513.01.T01 MTR_6g013160 27.273 374 184 15 13 302 9 378 2.40e-18 85.9
MsG0380017513.01.T01 MTR_5g080710 29.288 379 194 15 13 324 33 404 3.92e-18 85.9
MsG0380017513.01.T01 MTR_8g468810 29.900 301 172 10 6 277 18 308 4.17e-18 84.3
MsG0380017513.01.T01 MTR_3g095600 30.469 256 129 9 13 242 4 236 4.47e-18 84.0
MsG0380017513.01.T01 MTR_8g445780 26.221 389 199 12 11 323 11 387 4.75e-18 85.1
MsG0380017513.01.T01 MTR_8g468810 32.075 265 146 10 6 247 18 271 5.59e-18 84.7
MsG0380017513.01.T01 MTR_8g468810 32.075 265 146 10 6 247 18 271 6.32e-18 84.0
MsG0380017513.01.T01 MTR_8g468810 32.075 265 146 10 6 247 18 271 7.99e-18 84.0
MsG0380017513.01.T01 MTR_7g098590 46.939 98 46 1 13 104 18 115 2.23e-17 78.2
MsG0380017513.01.T01 MTR_7g081290 51.648 91 39 2 8 93 11 101 2.91e-17 80.9
MsG0380017513.01.T01 MTR_8g058965 33.816 207 109 9 13 192 13 218 3.01e-17 83.2
MsG0380017513.01.T01 MTR_1g492880 49.412 85 41 1 12 94 5 89 1.23e-16 75.5
MsG0380017513.01.T01 MTR_1g492880 49.412 85 41 1 12 94 5 89 1.34e-16 74.7
MsG0380017513.01.T01 MTR_3g113782 65.455 55 17 1 8 60 10 64 1.40e-16 74.7
MsG0380017513.01.T01 MTR_8g469020 30.734 218 119 9 7 194 1 216 2.29e-16 80.5
MsG0380017513.01.T01 MTR_5g039470 27.492 331 189 14 30 325 2 316 2.53e-16 79.3
MsG0380017513.01.T01 MTR_5g054920 31.707 164 97 5 175 326 3 163 2.65e-16 76.6
MsG0380017513.01.T01 MTR_7g007370 29.450 309 147 10 13 300 17 275 2.96e-16 79.3
MsG0380017513.01.T01 MTR_8g062080 34.359 195 109 8 13 192 23 213 3.08e-16 80.1
MsG0380017513.01.T01 MTR_4g050250 31.224 237 127 9 13 214 21 256 3.88e-16 79.7
MsG0380017513.01.T01 MTR_8g467800 35.714 196 98 7 12 189 19 204 3.91e-16 79.0
MsG0380017513.01.T01 MTR_2g100590 30.660 212 120 7 9 196 38 246 5.11e-16 79.3
MsG0380017513.01.T01 MTR_2g100590 30.660 212 120 7 9 196 38 246 5.57e-16 79.3
MsG0380017513.01.T01 MTR_2g100590 30.660 212 120 7 9 196 38 246 6.18e-16 79.3
MsG0380017513.01.T01 MTR_8g467790 26.816 358 201 17 13 319 148 495 6.88e-16 79.3
MsG0380017513.01.T01 MTR_4g056040 26.134 463 214 20 12 350 8 466 1.13e-15 78.6
MsG0380017513.01.T01 MTR_7g021930 28.012 332 183 15 11 334 8 291 3.89e-15 75.9
MsG0380017513.01.T01 MTR_7g021970 28.012 332 183 15 11 334 8 291 3.89e-15 75.9
MsG0380017513.01.T01 MTR_8g468760 26.954 371 189 15 13 317 9 363 4.31e-15 76.3
MsG0380017513.01.T01 MTR_8g062010 33.163 196 110 8 12 192 8 197 4.32e-15 76.6
MsG0380017513.01.T01 MTR_5g065100 29.618 314 175 13 10 307 5 288 4.58e-15 76.3
MsG0380017513.01.T01 MTR_7g022060 28.097 331 182 15 11 333 8 290 5.25e-15 75.5
MsG0380017513.01.T01 MTR_3g107940 46.392 97 49 2 232 326 80 175 8.86e-15 75.1
MsG0380017513.01.T01 MTR_8g062310 26.425 386 185 18 13 327 25 382 9.44e-15 75.5
MsG0380017513.01.T01 MTR_6g022520 30.224 268 149 8 84 325 10 265 1.08e-14 74.3
MsG0380017513.01.T01 MTR_8g468840 28.980 245 138 9 12 236 13 241 1.24e-14 75.1
MsG0380017513.01.T01 MTR_3g099900 35.503 169 95 6 11 169 16 180 1.59e-14 74.7
MsG0380017513.01.T01 MTR_1g077420 27.636 275 163 10 12 279 3 248 3.68e-14 72.4
MsG0380017513.01.T01 MTR_4g024780 32.121 165 102 4 13 169 146 308 4.52e-14 73.6
MsG0380017513.01.T01 MTR_8g015830 27.119 295 153 13 12 271 7 274 5.29e-14 73.6
MsG0380017513.01.T01 MTR_8g015830 26.263 297 153 12 12 271 7 274 7.82e-14 72.8
MsG0380017513.01.T01 MTR_2g083840 33.659 205 113 9 11 197 19 218 8.63e-14 72.8
MsG0380017513.01.T01 MTR_4g080590 30.270 185 123 4 12 191 22 205 9.96e-14 72.0
MsG0380017513.01.T01 MTR_8g468910 31.098 164 103 4 11 164 46 209 1.17e-13 72.0
MsG0380017513.01.T01 MTR_4g080590 30.270 185 123 4 12 191 22 205 1.21e-13 72.0
MsG0380017513.01.T01 MTR_8g070950 28.571 196 119 7 12 193 14 202 1.50e-13 72.0
MsG0380017513.01.T01 MTR_7g056280 35.664 143 79 4 12 143 5 145 1.94e-13 72.0
MsG0380017513.01.T01 MTR_8g066650 32.258 155 98 3 11 162 78 228 2.07e-13 71.6
MsG0380017513.01.T01 MTR_4g093690 32.105 190 109 6 13 188 18 201 3.85e-13 69.3
MsG0380017513.01.T01 MTR_7g025650 26.754 228 126 7 9 201 15 236 4.10e-13 70.9
MsG0380017513.01.T01 MTR_4g056030 25.227 440 233 16 12 358 8 444 5.10e-13 70.5
MsG0380017513.01.T01 MTR_2g020180 40.217 92 43 2 237 326 90 171 5.37e-13 67.8
MsG0380017513.01.T01 MTR_7g017280 31.548 168 102 3 13 169 148 313 5.71e-13 70.5
MsG0380017513.01.T01 MTR_3g095640 34.932 146 81 5 13 145 18 162 6.02e-13 67.0
MsG0380017513.01.T01 MTR_3g023270 32.727 165 99 4 12 170 11 169 6.66e-13 69.3
MsG0380017513.01.T01 MTR_5g087940 33.750 160 101 3 11 169 24 179 7.07e-13 69.7
MsG0380017513.01.T01 MTR_5g058350 34.444 180 91 6 13 189 8 163 8.29e-13 66.6
MsG0380017513.01.T01 MTR_8g017280 30.909 165 107 3 7 164 30 194 9.55e-13 68.6
MsG0380017513.01.T01 MTR_2g047858 29.744 195 117 7 10 189 112 301 1.19e-12 69.3
MsG0380017513.01.T01 MTR_8g017280 30.909 165 107 3 7 164 30 194 1.97e-12 68.6
MsG0380017513.01.T01 MTR_8g465650 28.729 181 103 4 9 169 8 182 2.22e-12 67.8
MsG0380017513.01.T01 MTR_2g100570 28.426 197 124 5 8 188 67 262 2.55e-12 68.2
MsG0380017513.01.T01 MTR_2g100570 28.426 197 124 5 8 188 67 262 2.65e-12 68.6
MsG0380017513.01.T01 MTR_5g021550 32.168 143 82 3 11 138 17 159 2.83e-12 64.7
MsG0380017513.01.T01 MTR_3g052940 30.337 178 111 5 4 168 11 188 3.19e-12 67.8
MsG0380017513.01.T01 MTR_3g052940 30.337 178 111 5 4 168 11 188 3.22e-12 67.8
MsG0380017513.01.T01 MTR_8g058970 31.776 214 110 9 13 192 19 230 3.25e-12 67.8
MsG0380017513.01.T01 MTR_3g052940 30.337 178 111 5 4 168 11 188 3.49e-12 67.8
MsG0380017513.01.T01 MTR_2g100570 28.283 198 125 5 8 189 67 263 3.60e-12 67.8
MsG0380017513.01.T01 MTR_3g107140 37.356 174 81 8 44 194 23 191 4.37e-12 65.1
MsG0380017513.01.T01 MTR_1g038710 30.986 213 128 7 13 208 19 229 5.03e-12 67.4
MsG0380017513.01.T01 MTR_8g015770 29.362 235 121 8 11 202 4 236 6.52e-12 67.0
MsG0380017513.01.T01 MTR_4g081030 28.814 236 152 6 11 241 15 239 6.84e-12 66.6
MsG0380017513.01.T01 MTR_7g068570 33.571 140 88 3 9 144 1 139 1.21e-11 63.2
MsG0380017513.01.T01 MTR_5g039970 29.319 191 115 4 12 188 18 202 1.51e-11 65.1
MsG0380017513.01.T01 MTR_6g092430 31.126 151 91 3 12 158 9 150 1.57e-11 65.5
MsG0380017513.01.T01 MTR_4g047950 33.742 163 95 5 12 164 12 171 1.78e-11 65.5
MsG0380017513.01.T01 MTR_3g052990 30.488 164 109 4 11 169 26 189 1.92e-11 65.5
MsG0380017513.01.T01 MTR_4g056020 34.314 204 115 9 12 201 8 206 2.05e-11 65.5
MsG0380017513.01.T01 MTR_3g023470 35.714 168 95 5 12 170 14 177 2.08e-11 65.1
MsG0380017513.01.T01 MTR_4g092300 44.578 83 42 2 11 91 23 103 2.21e-11 65.9
MsG0380017513.01.T01 MTR_7g056417 34.868 152 70 5 126 252 5 152 2.21e-11 62.0
MsG0380017513.01.T01 MTR_4g051480 44.578 83 42 2 11 91 23 103 2.27e-11 65.9
MsG0380017513.01.T01 MTR_8g014290 30.405 148 82 3 12 138 9 156 2.37e-11 62.0
MsG0380017513.01.T01 MTR_5g039950 25.745 369 205 11 12 327 22 374 2.52e-11 65.1
MsG0380017513.01.T01 MTR_0571s0010 58.491 53 22 0 8 60 27 79 2.72e-11 60.5
MsG0380017513.01.T01 MTR_3g007790 32.386 176 93 4 12 169 24 191 2.72e-11 64.7
MsG0380017513.01.T01 MTR_3g007830 32.386 176 93 4 12 169 10 177 3.09e-11 64.7
MsG0380017513.01.T01 MTR_8g062270 29.851 201 118 5 13 192 16 214 3.35e-11 64.7
MsG0380017513.01.T01 MTR_7g021630 33.577 137 74 4 11 143 15 138 3.71e-11 64.3
MsG0380017513.01.T01 MTR_7g021630 33.577 137 74 4 11 143 15 138 3.76e-11 64.3
MsG0380017513.01.T01 MTR_6g018660 31.319 182 95 8 13 170 20 195 3.77e-11 64.3
MsG0380017513.01.T01 MTR_1g067190 36.029 136 80 3 11 143 13 144 3.83e-11 63.9
MsG0380017513.01.T01 MTR_2g101950 31.548 168 104 5 11 170 78 242 3.96e-11 64.3
MsG0380017513.01.T01 MTR_2g101950 31.548 168 104 5 11 170 36 200 4.33e-11 64.3
MsG0380017513.01.T01 MTR_3g006580 33.088 136 84 3 11 143 31 162 4.66e-11 63.9
MsG0380017513.01.T01 MTR_2g101950 29.612 206 117 7 11 208 78 263 5.23e-11 63.9
MsG0380017513.01.T01 MTR_2g101950 29.612 206 117 7 11 208 77 262 5.36e-11 63.9
MsG0380017513.01.T01 MTR_8g015680 29.680 219 121 7 12 202 6 219 6.21e-11 63.9
MsG0380017513.01.T01 MTR_3g027130 28.488 172 97 3 4 153 94 261 6.59e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017513.01.T01 AT4G00160 28.533 375 192 15 9 315 12 378 1.26e-21 95.9
MsG0380017513.01.T01 AT5G41840 36.634 202 97 7 13 188 14 210 1.81e-21 95.9
MsG0380017513.01.T01 AT1G32375 30.052 386 185 16 13 325 2 375 3.98e-21 94.4
MsG0380017513.01.T01 AT1G32375 30.052 386 185 16 13 325 2 375 3.98e-21 94.4
MsG0380017513.01.T01 AT1G58310 35.981 214 103 7 11 194 6 215 1.36e-20 93.2
MsG0380017513.01.T01 AT3G50710 35.676 185 109 4 13 188 2 185 2.11e-20 92.4
MsG0380017513.01.T01 AT1G16930 33.516 182 116 3 11 188 13 193 6.01e-20 91.3
MsG0380017513.01.T01 AT1G16930 33.516 182 116 3 11 188 13 193 6.01e-20 91.3
MsG0380017513.01.T01 AT1G16930 33.516 182 116 3 11 188 13 193 6.01e-20 91.3
MsG0380017513.01.T01 AT5G56560 31.333 300 167 11 12 285 4 290 1.07e-19 90.9
MsG0380017513.01.T01 AT3G59200 33.846 195 106 6 11 188 5 193 1.33e-19 89.4
MsG0380017513.01.T01 AT5G56420 28.117 377 199 14 13 325 6 374 2.10e-19 89.4
MsG0380017513.01.T01 AT5G56420 28.117 377 199 14 13 325 6 374 2.10e-19 89.4
MsG0380017513.01.T01 AT5G56420 28.117 377 199 14 13 325 6 374 2.10e-19 89.4
MsG0380017513.01.T01 AT4G10400 37.097 186 102 5 13 188 2 182 2.23e-19 89.4
MsG0380017513.01.T01 AT4G10400 37.097 186 102 5 13 188 2 182 2.23e-19 89.4
MsG0380017513.01.T01 AT4G10400 37.097 186 102 5 13 188 2 182 2.23e-19 89.4
MsG0380017513.01.T01 AT4G09920 35.533 197 112 5 13 199 2 193 2.93e-19 87.4
MsG0380017513.01.T01 AT4G09920 35.533 197 112 5 13 199 2 193 2.93e-19 87.4
MsG0380017513.01.T01 AT4G09920 35.533 197 112 5 13 199 2 193 2.93e-19 87.4
MsG0380017513.01.T01 AT3G59200 33.846 195 106 6 11 188 5 193 3.11e-19 89.4
MsG0380017513.01.T01 AT5G41830 36.816 201 97 8 13 188 13 208 4.82e-19 88.6
MsG0380017513.01.T01 AT4G09920 35.533 197 112 5 13 199 2 193 4.85e-19 87.0
MsG0380017513.01.T01 AT4G09920 35.533 197 112 5 13 199 2 193 4.85e-19 87.0
MsG0380017513.01.T01 AT4G13965 26.757 370 200 11 8 315 5 365 5.75e-19 88.2
MsG0380017513.01.T01 AT2G04230 36.058 208 117 6 11 205 11 215 9.43e-19 87.4
MsG0380017513.01.T01 AT1G55660 37.037 189 108 5 13 191 53 240 1.02e-18 86.7
MsG0380017513.01.T01 AT5G22660 36.813 182 110 4 10 188 10 189 1.13e-18 85.9
MsG0380017513.01.T01 AT1G55660 36.041 197 115 5 13 199 53 248 1.42e-18 87.4
MsG0380017513.01.T01 AT5G22660 37.017 181 109 4 11 188 11 189 2.07e-18 86.7
MsG0380017513.01.T01 AT5G18780 30.769 221 136 5 11 219 9 224 2.26e-18 86.3
MsG0380017513.01.T01 AT5G18780 30.769 221 136 5 11 219 9 224 2.26e-18 86.3
MsG0380017513.01.T01 AT2G26860 35.484 186 109 5 13 188 2 186 2.48e-18 85.9
MsG0380017513.01.T01 AT2G26860 35.484 186 109 5 13 188 2 186 2.48e-18 85.9
MsG0380017513.01.T01 AT4G00315 30.802 237 141 7 13 240 2 224 2.70e-18 86.3
MsG0380017513.01.T01 AT5G18780 30.769 221 136 5 11 219 9 224 3.59e-18 85.5
MsG0380017513.01.T01 AT5G18780 30.769 221 136 5 11 219 9 224 3.59e-18 85.5
MsG0380017513.01.T01 AT5G56820 28.455 369 198 13 13 325 15 373 4.68e-18 85.5
MsG0380017513.01.T01 AT4G00320 35.323 201 104 7 11 188 11 208 8.77e-18 85.1
MsG0380017513.01.T01 AT1G55030 27.394 376 202 14 13 326 19 385 9.83e-18 84.3
MsG0380017513.01.T01 AT1G55030 27.394 376 202 14 13 326 9 375 1.01e-17 84.3
MsG0380017513.01.T01 AT4G26340 37.158 183 111 4 13 191 2 184 1.60e-17 84.0
MsG0380017513.01.T01 AT5G27750 33.838 198 108 7 9 188 1 193 2.13e-17 83.2
MsG0380017513.01.T01 AT3G59240 34.555 191 108 8 12 188 7 194 2.33e-17 83.6
MsG0380017513.01.T01 AT5G27750 33.838 198 108 7 9 188 1 193 2.70e-17 83.2
MsG0380017513.01.T01 AT1G60400 34.043 188 106 7 13 188 14 195 3.84e-17 82.4
MsG0380017513.01.T01 AT3G59210 35.897 195 102 7 11 188 5 193 3.88e-17 82.8
MsG0380017513.01.T01 AT3G59210 35.897 195 102 7 11 188 5 193 3.88e-17 82.8
MsG0380017513.01.T01 AT3G59210 35.897 195 102 7 11 188 5 193 3.88e-17 82.8
MsG0380017513.01.T01 AT3G59210 35.897 195 102 7 11 188 5 193 3.88e-17 82.8
MsG0380017513.01.T01 AT3G59210 35.897 195 102 7 11 188 5 193 3.88e-17 82.8
MsG0380017513.01.T01 AT5G56370 29.067 375 193 15 13 325 2 365 4.54e-17 82.4
MsG0380017513.01.T01 AT5G56370 29.067 375 193 15 13 325 2 365 4.54e-17 82.4
MsG0380017513.01.T01 AT3G58880 37.306 193 99 8 13 188 3 190 5.40e-17 82.4
MsG0380017513.01.T01 AT4G14096 33.476 233 132 8 13 235 8 227 6.27e-17 82.4
MsG0380017513.01.T01 AT4G14096 33.476 233 132 8 13 235 8 227 6.27e-17 82.4
MsG0380017513.01.T01 AT3G52680 36.216 185 109 7 11 188 19 201 6.77e-17 81.6
MsG0380017513.01.T01 AT3G52680 36.216 185 109 7 11 188 19 201 7.25e-17 82.0
MsG0380017513.01.T01 AT1G51370 26.098 410 212 14 12 356 18 401 8.00e-17 81.6
MsG0380017513.01.T01 AT1G51370 26.379 417 224 16 12 356 18 423 8.21e-17 81.6
MsG0380017513.01.T01 AT1G69630 37.433 187 106 5 13 191 18 201 9.57e-17 81.6
MsG0380017513.01.T01 AT3G44810 32.618 233 121 9 15 218 9 234 1.07e-16 81.6
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 43 219 4.22e-16 79.7
MsG0380017513.01.T01 AT5G56560 33.333 207 126 6 9 210 1 200 5.85e-16 79.0
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 43 219 5.95e-16 79.3
MsG0380017513.01.T01 AT2G26030 33.663 202 116 9 11 203 2 194 5.97e-16 79.3
MsG0380017513.01.T01 AT2G26030 33.663 202 116 9 11 203 2 194 5.97e-16 79.3
MsG0380017513.01.T01 AT2G26030 33.663 202 116 9 11 203 2 194 6.02e-16 79.3
MsG0380017513.01.T01 AT5G56380 34.737 190 107 6 13 188 2 188 6.85e-16 79.0
MsG0380017513.01.T01 AT5G56380 34.737 190 107 6 13 188 2 188 6.85e-16 79.0
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 6 182 7.38e-16 79.0
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 6 182 7.38e-16 79.0
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 6 182 7.38e-16 79.0
MsG0380017513.01.T01 AT5G22700 34.973 183 106 5 13 188 6 182 7.38e-16 79.0
MsG0380017513.01.T01 AT3G49150 32.990 194 106 8 12 188 15 201 7.55e-16 79.0
MsG0380017513.01.T01 AT4G22280 32.984 191 101 6 13 188 2 180 8.42e-16 77.8
MsG0380017513.01.T01 AT4G22280 32.984 191 101 6 13 188 2 180 9.69e-16 78.6
MsG0380017513.01.T01 AT5G38590 29.412 374 180 18 13 317 2 360 1.59e-15 77.8
MsG0380017513.01.T01 AT3G59170 29.817 218 108 6 11 188 5 217 2.57e-15 77.4
MsG0380017513.01.T01 AT5G53840 31.148 183 114 5 12 188 17 193 2.87e-15 77.0
MsG0380017513.01.T01 AT3G59190 34.359 195 108 7 11 188 10 201 2.97e-15 76.6
MsG0380017513.01.T01 AT4G26350 33.659 205 115 8 13 201 2 201 4.15e-15 76.6
MsG0380017513.01.T01 AT4G14103 35.602 191 106 7 11 188 6 192 4.72e-15 76.3
MsG0380017513.01.T01 AT4G14103 35.602 191 106 7 11 188 6 192 4.72e-15 76.3
MsG0380017513.01.T01 AT3G59000 30.804 224 109 8 13 196 2 219 4.81e-15 75.9
MsG0380017513.01.T01 AT5G38392 33.668 199 103 8 13 188 2 194 5.83e-15 73.6
MsG0380017513.01.T01 AT4G14103 35.602 191 106 7 11 188 6 192 5.95e-15 76.3
MsG0380017513.01.T01 AT3G58980 31.771 192 107 7 13 188 2 185 6.44e-15 76.6
MsG0380017513.01.T01 AT5G44950 30.263 228 140 10 11 225 2 223 7.99e-15 75.9
MsG0380017513.01.T01 AT3G59190 34.359 195 108 7 11 188 10 201 8.66e-15 75.9
MsG0380017513.01.T01 AT4G15060 35.821 201 117 6 1 191 160 358 1.29e-14 75.5
MsG0380017513.01.T01 AT3G58960 30.851 188 113 5 13 188 2 184 1.42e-14 75.1
MsG0380017513.01.T01 AT1G13780 32.487 197 114 6 9 188 6 200 1.53e-14 75.1
MsG0380017513.01.T01 AT3G56780 34.254 181 106 6 15 188 9 183 1.77e-14 74.7
MsG0380017513.01.T01 AT1G13780 32.487 197 114 6 9 188 6 200 1.90e-14 73.9
MsG0380017513.01.T01 AT5G56370 37.158 183 100 7 13 186 2 178 2.06e-14 73.6
MsG0380017513.01.T01 AT5G53635 30.570 193 123 4 15 202 2 188 2.14e-14 74.3
MsG0380017513.01.T01 AT3G56780 34.254 181 106 6 15 188 9 183 2.28e-14 74.7
MsG0380017513.01.T01 AT3G59230 32.212 208 109 8 6 188 5 205 2.28e-14 74.7
MsG0380017513.01.T01 AT4G13960 33.333 192 105 7 13 188 2 186 2.74e-14 74.3
MsG0380017513.01.T01 AT4G13960 33.333 192 105 7 13 188 2 186 2.74e-14 74.3
MsG0380017513.01.T01 AT5G22670 28.755 233 148 6 8 228 6 232 3.08e-14 73.9
MsG0380017513.01.T01 AT5G56400 35.294 187 107 6 11 188 31 212 3.22e-14 73.9
MsG0380017513.01.T01 AT3G56780 34.254 181 106 6 15 188 9 183 3.74e-14 73.6
MsG0380017513.01.T01 AT5G62970 32.057 209 112 5 13 191 2 210 3.94e-14 73.6
MsG0380017513.01.T01 AT4G15060 35.979 189 109 6 13 191 26 212 4.75e-14 73.6
MsG0380017513.01.T01 AT2G42720 32.308 195 113 8 13 191 2 193 4.91e-14 73.6
MsG0380017513.01.T01 AT3G26922 32.787 183 116 5 11 188 12 192 5.52e-14 72.4
MsG0380017513.01.T01 AT3G26922 32.787 183 116 5 11 188 12 192 5.52e-14 72.4
MsG0380017513.01.T01 AT3G62430 32.447 188 112 6 13 188 2 186 6.34e-14 73.2
MsG0380017513.01.T01 AT1G66290 34.066 182 103 8 13 186 29 201 6.69e-14 73.2
MsG0380017513.01.T01 AT5G38590 35.519 183 107 7 13 188 2 180 9.22e-14 71.2
MsG0380017513.01.T01 AT3G49040 36.316 190 103 7 11 188 15 198 1.22e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 1.30e-13 71.2
MsG0380017513.01.T01 AT1G78750 34.021 194 104 8 13 188 18 205 1.91e-13 71.6
MsG0380017513.01.T01 AT1G78750 34.021 194 104 8 13 188 18 205 1.91e-13 71.6
MsG0380017513.01.T01 AT3G59160 28.761 226 118 7 1 188 1 221 1.99e-13 71.6
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.07e-13 70.9
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.07e-13 70.9
MsG0380017513.01.T01 AT5G44960 34.375 192 103 9 13 189 5 188 2.07e-13 71.2
MsG0380017513.01.T01 AT1G51370 32.275 189 122 5 12 199 18 201 2.12e-13 70.9
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.31e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.31e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.31e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 2.31e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 14 211 2.32e-13 71.2
MsG0380017513.01.T01 AT3G58900 32.292 192 111 8 13 189 2 189 2.48e-13 70.5
MsG0380017513.01.T01 AT5G60610 34.946 186 109 6 13 192 2 181 2.64e-13 70.9
MsG0380017513.01.T01 AT5G60610 34.946 186 109 6 13 192 2 181 2.64e-13 70.9
MsG0380017513.01.T01 AT3G26930 31.336 217 128 6 8 213 16 222 2.82e-13 71.2
MsG0380017513.01.T01 AT3G58900 32.292 192 111 8 13 189 2 189 2.88e-13 70.5
MsG0380017513.01.T01 AT3G58900 32.292 192 111 8 13 189 2 189 2.88e-13 70.5
MsG0380017513.01.T01 AT5G53640 29.101 189 109 5 12 188 21 196 2.88e-13 68.9
MsG0380017513.01.T01 AT5G41630 32.836 201 107 8 11 188 10 205 2.98e-13 71.2
MsG0380017513.01.T01 AT1G06630 32.673 202 113 10 6 188 5 202 3.37e-13 70.9
MsG0380017513.01.T01 AT3G51530 26.344 372 177 17 11 303 28 381 3.39e-13 70.9
MsG0380017513.01.T01 AT3G58900 32.292 192 111 8 13 189 2 189 3.43e-13 70.9
MsG0380017513.01.T01 AT5G56440 33.514 185 110 6 13 188 2 182 6.50e-13 70.1
MsG0380017513.01.T01 AT5G25850 31.351 185 118 4 13 193 20 199 8.85e-13 69.7
MsG0380017513.01.T01 AT1G48400 29.787 188 118 5 13 188 10 195 9.80e-13 69.7
MsG0380017513.01.T01 AT5G56810 24.219 384 217 13 9 325 11 387 1.12e-12 69.3
MsG0380017513.01.T01 AT1G48400 29.787 188 118 5 13 188 10 195 1.20e-12 69.3
MsG0380017513.01.T01 AT5G56690 32.984 191 110 7 15 191 4 190 1.26e-12 68.9
MsG0380017513.01.T01 AT5G56810 29.843 191 117 7 9 188 11 195 1.60e-12 68.2
MsG0380017513.01.T01 AT5G22720 30.159 189 121 4 8 188 18 203 2.00e-12 68.6
MsG0380017513.01.T01 AT5G18770 30.500 200 116 5 11 196 22 212 2.09e-12 68.6
MsG0380017513.01.T01 AT3G60040 31.628 215 113 9 8 196 8 214 2.30e-12 68.6
MsG0380017513.01.T01 AT3G59000 35.227 176 92 8 13 169 2 174 2.43e-12 68.6
MsG0380017513.01.T01 AT1G66310 33.696 184 108 5 13 188 19 196 2.86e-12 68.2
MsG0380017513.01.T01 AT5G18770 30.500 200 116 5 11 196 22 212 3.07e-12 67.8
MsG0380017513.01.T01 AT5G38396 32.161 199 106 9 13 188 2 194 3.16e-12 67.8
MsG0380017513.01.T01 AT3G58920 32.995 197 107 8 13 188 2 194 3.27e-12 67.8
MsG0380017513.01.T01 AT1G78760 31.319 182 119 3 12 188 15 195 3.70e-12 67.8
MsG0380017513.01.T01 AT3G60040 30.952 210 116 8 8 191 228 434 4.29e-12 68.2
MsG0380017513.01.T01 AT3G60040 30.952 210 116 8 8 191 225 431 4.70e-12 67.8
MsG0380017513.01.T01 AT3G42770 33.333 207 108 9 15 199 1 199 4.87e-12 67.4
MsG0380017513.01.T01 AT3G60040 30.952 210 116 8 8 191 227 433 4.91e-12 67.8
MsG0380017513.01.T01 AT3G60040 30.952 210 116 8 8 191 227 433 4.92e-12 67.8
MsG0380017513.01.T01 AT5G25860 31.373 204 111 10 11 188 10 210 6.14e-12 67.0
MsG0380017513.01.T01 AT5G22730 29.891 184 125 2 9 188 24 207 7.44e-12 66.6
MsG0380017513.01.T01 AT5G22730 29.891 184 125 2 9 188 24 207 7.44e-12 66.6
MsG0380017513.01.T01 AT5G22730 28.033 239 152 4 9 235 24 254 7.93e-12 66.6
MsG0380017513.01.T01 AT3G49020 28.108 370 185 17 9 309 18 375 9.20e-12 66.6
MsG0380017513.01.T01 AT5G50270 37.433 187 107 8 13 191 2 186 9.35e-12 66.2
MsG0380017513.01.T01 AT5G50270 37.433 187 107 8 13 191 2 186 9.69e-12 65.5
MsG0380017513.01.T01 AT3G44060 30.500 200 123 7 15 202 1 196 1.10e-11 66.2
MsG0380017513.01.T01 AT1G21990 28.415 183 122 5 13 188 9 189 1.43e-11 65.9
MsG0380017513.01.T01 AT3G58940 30.049 203 108 11 13 188 2 197 2.81e-11 65.5
MsG0380017513.01.T01 AT3G58940 30.049 203 108 11 13 188 2 197 2.81e-11 65.5
MsG0380017513.01.T01 AT1G52650 28.947 190 117 5 13 188 2 187 4.14e-11 64.7
MsG0380017513.01.T01 AT3G03030 31.841 201 102 10 13 188 2 192 4.86e-11 64.3
MsG0380017513.01.T01 AT1G19070 44.578 83 42 3 13 92 2 83 5.28e-11 58.9
MsG0380017513.01.T01 AT3G03030 31.841 201 102 10 13 188 2 192 6.72e-11 63.2
MsG0380017513.01.T01 AT1G60410 30.000 190 120 6 9 188 6 192 7.04e-11 63.5
MsG0380017513.01.T01 AT5G44940 28.395 324 185 13 13 307 5 310 7.63e-11 63.5
MsG0380017513.01.T01 AT1G78840 31.414 191 114 5 9 191 1 182 8.29e-11 63.5
MsG0380017513.01.T01 AT1G78840 31.414 191 114 5 9 191 1 182 8.29e-11 63.5
MsG0380017513.01.T01 AT1G66300 30.055 183 116 3 13 188 29 206 8.43e-11 63.5
MsG0380017513.01.T01 AT1G66320 31.111 180 108 6 18 188 35 207 9.67e-11 63.5

Find 75 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGGGATAAAAGACATTT+TGG 0.242050 3:+97217519 None:intergenic
AATCATGGATATCTCTATTA+AGG 0.282362 3:+97219684 None:intergenic
AATGATAAGAATTTGAAGTT+TGG 0.292233 3:+97217689 None:intergenic
ATGCTCACTTAGAAATTATA+GGG 0.297877 3:-97217490 MsG0380017513.01.T01:CDS
CTGCCCGATTCTACAAGATT+TGG 0.303965 3:-97219423 MsG0380017513.01.T01:CDS
CATGCTCACTTAGAAATTAT+AGG 0.308810 3:-97217491 MsG0380017513.01.T01:CDS
ATGATAAGAATTTGAAGTTT+GGG 0.319375 3:+97217690 None:intergenic
GAAAGAAGGCAATGTCATTA+TGG 0.342640 3:+97219595 None:intergenic
GATGACGGAGTTGACGAAAT+TGG 0.343341 3:+97219760 None:intergenic
ATGGTTGATGAGAAGGTTCC+CGG 0.351692 3:-97217825 MsG0380017513.01.T01:CDS
AACGTTTGCATGACAAAGAT+TGG 0.352656 3:-97217560 MsG0380017513.01.T01:CDS
AGTGAGGGAAGATAAAAGTA+TGG 0.357796 3:+97219512 None:intergenic
GCACTGATTCTGTCTTCGTT+TGG 0.361924 3:+97219938 None:intergenic
TAAGTGAGCATGTTGATAGA+TGG 0.368246 3:+97217502 None:intergenic
GTTTCCAAATCTTGTAGAAT+CGG 0.392226 3:+97219419 None:intergenic
ATCATTGATCTCTGCAACTC+AGG 0.418649 3:-97219623 MsG0380017513.01.T01:CDS
TTATTCCTACCGAGTTTGAT+TGG 0.419067 3:-97217974 MsG0380017513.01.T01:CDS
AGACAGAATCAGTGCTTTGC+CGG 0.434920 3:-97219930 MsG0380017513.01.T01:CDS
CAAAGAGGTGGAAACCACTT+TGG 0.435868 3:-97219841 MsG0380017513.01.T01:CDS
ATGTGGTCCTATCTAATTTG+AGG 0.444016 3:+97219546 None:intergenic
TATTAAGGAAGCAGCACTTA+AGG 0.454522 3:+97219699 None:intergenic
GACAATGTTGTCAAGTGTAC+CGG 0.465644 3:+97217806 None:intergenic
TGTCAGTCCTCAAATTAGAT+AGG 0.468193 3:-97219553 MsG0380017513.01.T01:CDS
ATTTCCACACATGTTCCAAC+AGG 0.481513 3:+97219377 None:intergenic
CAGCAGTATAAAGAAAATCA+TGG 0.487309 3:+97219669 None:intergenic
GTAGCTTATGGTTGATGAGA+AGG 0.496666 3:-97217832 MsG0380017513.01.T01:intron
AAAGGTTAAAGCATCTTGAA+AGG 0.505671 3:+97219784 None:intergenic
ACGTTTGCATGACAAAGATT+GGG 0.506115 3:-97217559 MsG0380017513.01.T01:CDS
TTTCCAAATCTTGTAGAATC+GGG 0.506877 3:+97219420 None:intergenic
GCACTTCATCCATTGCAACT+AGG 0.511010 3:+97216873 None:intergenic
TTTATCTCGATTGGCGATGA+CGG 0.517075 3:+97219745 None:intergenic
GGAGTTGACGAAATTGGAAA+AGG 0.525123 3:+97219766 None:intergenic
AAGTGAGCATGTTGATAGAT+GGG 0.526523 3:+97217503 None:intergenic
AAGGTTAAAGCATCTTGAAA+GGG 0.528752 3:+97219785 None:intergenic
AGACACTTAAATGTCAATAG+AGG 0.529360 3:+97217735 None:intergenic
ACATGATAAAGAAGTGAGTC+CGG 0.533003 3:+97219911 None:intergenic
ACCGTCTTTAGTAGTAAGAA+AGG 0.540028 3:+97219883 None:intergenic
TCCTTTCTTACTACTAAAGA+CGG 0.541546 3:-97219884 MsG0380017513.01.T01:CDS
TTGTCATGCAAACGTTCACT+TGG 0.543569 3:+97217567 None:intergenic
GGTAGAACGAGCGGATAGGT+AGG 0.548861 3:+97219720 None:intergenic
CAACGTGGAGCGTTTGCGTG+TGG 0.550505 3:-97217946 MsG0380017513.01.T01:CDS
TCAAATTCTTATCATTGATG+AGG 0.553200 3:-97217682 MsG0380017513.01.T01:intron
TTAGTACTAAGAATGAAAGA+AGG 0.554730 3:+97219581 None:intergenic
TTAAAGCATCTTGAAAGGGT+TGG 0.558935 3:+97219789 None:intergenic
GTTTCACAATTTAACCCGCA+TGG 0.560344 3:-97217781 MsG0380017513.01.T01:CDS
GTGGTTTCCACCTCTTTGAG+AGG 0.572014 3:+97219846 None:intergenic
ACAATGTTGTCAAGTGTACC+GGG 0.579472 3:+97217807 None:intergenic
ACTGACGGACCTAGTTGCAA+TGG 0.580780 3:-97216882 MsG0380017513.01.T01:CDS
ACGGAAGATCAGCTCCATGC+GGG 0.582074 3:+97217767 None:intergenic
CCTCTTTGAGAGGATGCTTG+TGG 0.583063 3:+97219856 None:intergenic
GTGAGGGAAGATAAAAGTAT+GGG 0.588932 3:+97219513 None:intergenic
ATCTAATTTGAGGACTGACA+AGG 0.595155 3:+97219556 None:intergenic
CAAGTGAAGGACTTTGAGTG+AGG 0.599328 3:+97219496 None:intergenic
CAAGCATCCTCTCAAAGAGG+TGG 0.599850 3:-97219853 MsG0380017513.01.T01:CDS
ATTTGACGATATTCAAGTGA+AGG 0.602805 3:+97219483 None:intergenic
GTTTGATTGGTTTCACAACG+TGG 0.611907 3:-97217961 MsG0380017513.01.T01:CDS
AAGTGAAGGACTTTGAGTGA+GGG 0.613143 3:+97219497 None:intergenic
TGAAACCAATCAAACTCGGT+AGG 0.615047 3:+97217969 None:intergenic
GTAGAACGAGCGGATAGGTA+GGG 0.622418 3:+97219721 None:intergenic
TTAAGGTAGAACGAGCGGAT+AGG 0.622817 3:+97219716 None:intergenic
AGGGTTGGTCATCGAAGCGG+AGG 0.625274 3:+97219804 None:intergenic
CGTGGAGCGTTTGCGTGTGG+AGG 0.627664 3:-97217943 MsG0380017513.01.T01:intron
TTTGGAATTGAAAGCTGCGG+CGG 0.636377 3:+97219956 None:intergenic
TCGTTTGGAATTGAAAGCTG+CGG 0.641587 3:+97219953 None:intergenic
AGTTGCAGAGATCAATGATG+AGG 0.646239 3:+97219627 None:intergenic
CTTTGAGAGGATGCTTGTGG+CGG 0.648682 3:+97219859 None:intergenic
TGCTCACTTAGAAATTATAG+GGG 0.650636 3:-97217489 MsG0380017513.01.T01:CDS
ATGAGTTGTGAGATCCAAAG+TGG 0.652509 3:+97219827 None:intergenic
CCACAAGCATCCTCTCAAAG+AGG 0.656620 3:-97219856 MsG0380017513.01.T01:CDS
AGCACTTAAGGTAGAACGAG+CGG 0.662027 3:+97219711 None:intergenic
CACGGAAGATCAGCTCCATG+CGG 0.666156 3:+97217766 None:intergenic
TTTGCATGACAAAGATTGGG+AGG 0.668209 3:-97217556 MsG0380017513.01.T01:CDS
GAAAGGGTTGGTCATCGAAG+CGG 0.668810 3:+97219801 None:intergenic
GTATGGGATTTCATTCAATG+TGG 0.671938 3:+97219529 None:intergenic
GTTGTGAAACCAATCAAACT+CGG 0.703278 3:+97217965 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTCAATATTTTTATTTG+AGG - Chr3:97218347-97218366 MsG0380017513.01.T01:intron 10.0%
!! AATAAATAAAAGTTTACATG+TGG + Chr3:97219513-97219532 None:intergenic 15.0%
!! AGTCAAATGTATATTATATA+CGG + Chr3:97219213-97219232 None:intergenic 15.0%
!!! AAAATATTTTAGCAAAACTT+GGG + Chr3:97217726-97217745 None:intergenic 15.0%
!! ATTAGTAGTGTTTATATAGT+GGG - Chr3:97217572-97217591 MsG0380017513.01.T01:CDS 20.0%
!!! AAATATTTTAGCAAAACTTG+GGG + Chr3:97217725-97217744 None:intergenic 20.0%
!!! AAGATAATTCCTTTTTCATT+TGG + Chr3:97219472-97219491 None:intergenic 20.0%
!!! AATGATAAGAATTTGAAGTT+TGG + Chr3:97219144-97219163 None:intergenic 20.0%
!!! ATGATAAGAATTTGAAGTTT+GGG + Chr3:97219143-97219162 None:intergenic 20.0%
!!! CAAAATATTTTAGCAAAACT+TGG + Chr3:97217727-97217746 None:intergenic 20.0%
!!! CAAGTTTTGCTAAAATATTT+TGG - Chr3:97217725-97217744 MsG0380017513.01.T01:CDS 20.0%
!!! TATTTTGTTTTTGTAGCTTA+TGG - Chr3:97218986-97219005 MsG0380017513.01.T01:intron 20.0%
!!! TATTTTTATTTGAGGAGAAA+TGG - Chr3:97218355-97218374 MsG0380017513.01.T01:intron 20.0%
! AACTAATAAGTGAGAAACTT+TGG + Chr3:97217894-97217913 None:intergenic 25.0%
! AATCATGGATATCTCTATTA+AGG + Chr3:97217149-97217168 None:intergenic 25.0%
! ACAAGTAATATGAGAAACTT+TGG + Chr3:97217869-97217888 None:intergenic 25.0%
! ACTAATAAGTGAGAAACTTT+GGG + Chr3:97217893-97217912 None:intergenic 25.0%
! ATACTGAAACCACTTTAATA+TGG + Chr3:97218500-97218519 None:intergenic 25.0%
! ATGCTCACTTAGAAATTATA+GGG - Chr3:97219340-97219359 MsG0380017513.01.T01:intron 25.0%
! ATGTGAGTTCTCTATTTATA+GGG + Chr3:97217926-97217945 None:intergenic 25.0%
! CAAGTAATATGAGAAACTTT+GGG + Chr3:97217868-97217887 None:intergenic 25.0%
! CATTAGTAGTGTTTATATAG+TGG - Chr3:97217571-97217590 MsG0380017513.01.T01:CDS 25.0%
! GACATTGTTTATTCCAAATA+GGG + Chr3:97218288-97218307 None:intergenic 25.0%
! GTAACAATACCATATTAAAG+TGG - Chr3:97218488-97218507 MsG0380017513.01.T01:intron 25.0%
! TAAGTACTCATAGAAAGAAT+TGG - Chr3:97218949-97218968 MsG0380017513.01.T01:intron 25.0%
! TATGTGAGTTCTCTATTTAT+AGG + Chr3:97217927-97217946 None:intergenic 25.0%
! TCAAATTCTTATCATTGATG+AGG - Chr3:97219148-97219167 MsG0380017513.01.T01:intron 25.0%
! TTAGTACTAAGAATGAAAGA+AGG + Chr3:97217252-97217271 None:intergenic 25.0%
! TTAGTAGTGTTTATATAGTG+GGG - Chr3:97217573-97217592 MsG0380017513.01.T01:CDS 25.0%
! TTCTATGAGTACTTATTCAA+GGG + Chr3:97218944-97218963 None:intergenic 25.0%
! TTTCTATGAGTACTTATTCA+AGG + Chr3:97218945-97218964 None:intergenic 25.0%
!! ATTTCTCCAAAGTATCAATA+TGG + Chr3:97218411-97218430 None:intergenic 25.0%
!! GAAAAAATCTGTTTTACTGA+CGG - Chr3:97219933-97219952 MsG0380017513.01.T01:CDS 25.0%
!! GACAATTCTTAACTTTAGAA+TGG - Chr3:97219829-97219848 MsG0380017513.01.T01:CDS 25.0%
!! TTGATACTTTGGAGAAATTA+AGG - Chr3:97218413-97218432 MsG0380017513.01.T01:intron 25.0%
!!! AAAACAGATTTTTTCTTTGC+TGG + Chr3:97219928-97219947 None:intergenic 25.0%
!!! AATATTTGCTGTGATCAAAT+TGG + Chr3:97218826-97218845 None:intergenic 25.0%
!!! AATTCTTAACTTTAGAATGG+TGG - Chr3:97219832-97219851 MsG0380017513.01.T01:CDS 25.0%
AAAATCGGTGACATATTGAT+CGG - Chr3:97219777-97219796 MsG0380017513.01.T01:CDS 30.0%
AAGGGACATATATTATCGAA+GGG + Chr3:97218235-97218254 None:intergenic 30.0%
AAGTAATTGCAGTTCAAAAG+AGG + Chr3:97219654-97219673 None:intergenic 30.0%
AGAAATTAAGGTTAGAATGG+TGG - Chr3:97218425-97218444 MsG0380017513.01.T01:intron 30.0%
AGACACTTAAATGTCAATAG+AGG + Chr3:97219098-97219117 None:intergenic 30.0%
AGGATGTACGCTTAAAAATT+CGG + Chr3:97217436-97217455 None:intergenic 30.0%
ATTAAACCGAAAAAGGACTA+TGG + Chr3:97218175-97218194 None:intergenic 30.0%
ATTTGACGATATTCAAGTGA+AGG + Chr3:97217350-97217369 None:intergenic 30.0%
CAGCAGTATAAAGAAAATCA+TGG + Chr3:97217164-97217183 None:intergenic 30.0%
CAGTTGAGCTGAATTAAAAT+CGG - Chr3:97219762-97219781 MsG0380017513.01.T01:CDS 30.0%
CATGCTCACTTAGAAATTAT+AGG - Chr3:97219339-97219358 MsG0380017513.01.T01:intron 30.0%
CTTCGGTAGATAATAGAATT+TGG - Chr3:97218719-97218738 MsG0380017513.01.T01:intron 30.0%
CTTTATACTGCTGTAAAAAG+CGG - Chr3:97217171-97217190 MsG0380017513.01.T01:intron 30.0%
GAAATCCAAATACAACAGTT+TGG - Chr3:97218741-97218760 MsG0380017513.01.T01:intron 30.0%
GATTTCCAAACTGTTGTATT+TGG + Chr3:97218749-97218768 None:intergenic 30.0%
GGACATTGTTTATTCCAAAT+AGG + Chr3:97218289-97218308 None:intergenic 30.0%
GGTATCAAGAATGATCTTAA+CGG - Chr3:97218313-97218332 MsG0380017513.01.T01:intron 30.0%
GTATTGTTACCACTCTATTA+TGG + Chr3:97218478-97218497 None:intergenic 30.0%
GTTGTGTGAATTGAAAAAAG+TGG - Chr3:97217522-97217541 MsG0380017513.01.T01:CDS 30.0%
GTTTCCAAATCTTGTAGAAT+CGG + Chr3:97217414-97217433 None:intergenic 30.0%
TAAACACAAATTCCCATGTT+GGG - Chr3:97217489-97217508 MsG0380017513.01.T01:CDS 30.0%
TACATGTGGTTGAATTCTTT+AGG + Chr3:97219499-97219518 None:intergenic 30.0%
TAGTAGTGTTTATATAGTGG+GGG - Chr3:97217574-97217593 MsG0380017513.01.T01:CDS 30.0%
TCCTTTCTTACTACTAAAGA+CGG - Chr3:97216946-97216965 MsG0380017513.01.T01:CDS 30.0%
TCTATGAGTACTTATTCAAG+GGG + Chr3:97218943-97218962 None:intergenic 30.0%
TGCTCACTTAGAAATTATAG+GGG - Chr3:97219341-97219360 MsG0380017513.01.T01:intron 30.0%
TGGAGAAATTAAGGTTAGAA+TGG - Chr3:97218422-97218441 MsG0380017513.01.T01:intron 30.0%
TTAAGATCATAGTCCCTATT+TGG - Chr3:97218272-97218291 MsG0380017513.01.T01:intron 30.0%
TTCGATAATATATGTCCCTT+CGG - Chr3:97218235-97218254 MsG0380017513.01.T01:intron 30.0%
TTTCCAAATCTTGTAGAATC+GGG + Chr3:97217413-97217432 None:intergenic 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG - Chr3:97217963-97217982 MsG0380017513.01.T01:CDS 30.0%
! AAAGGTTAAAGCATCTTGAA+AGG + Chr3:97217049-97217068 None:intergenic 30.0%
! AAAGTACTCTTTATTCCGAA+GGG + Chr3:97218253-97218272 None:intergenic 30.0%
! AAGGTTAAAGCATCTTGAAA+GGG + Chr3:97217048-97217067 None:intergenic 30.0%
! AGATGGGATAAAAGACATTT+TGG + Chr3:97219314-97219333 None:intergenic 30.0%
! TATCTCTTGAAGCTTTTATC+TGG - Chr3:97217384-97217403 MsG0380017513.01.T01:intron 30.0%
! TTAAGACCATAGTCCTTTTT+CGG - Chr3:97218166-97218185 MsG0380017513.01.T01:intron 30.0%
! TTCCTCTCTTCTTTTGAATA+CGG + Chr3:97218789-97218808 None:intergenic 30.0%
!! AAAAGTACTCTTTATTCCGA+AGG + Chr3:97218254-97218273 None:intergenic 30.0%
!! GAACGCAATCTAGAATATTT+TGG - Chr3:97217747-97217766 MsG0380017513.01.T01:CDS 30.0%
!! TTTTATTTGAGGAGAAATGG+TGG - Chr3:97218358-97218377 MsG0380017513.01.T01:intron 30.0%
!!! AGACATTTTGGAACAATTTG+TGG + Chr3:97219302-97219321 None:intergenic 30.0%
AAAGGAGTAGAAAAAGGTGA+AGG + Chr3:97218120-97218139 None:intergenic 35.0%
AACACAAGTCAAAAAAGGGA+GGG + Chr3:97218003-97218022 None:intergenic 35.0%
AACGTTTGCATGACAAAGAT+TGG - Chr3:97219270-97219289 MsG0380017513.01.T01:intron 35.0%
AAGAACACTCTTAATTCCGA+AGG + Chr3:97218148-97218167 None:intergenic 35.0%
AAGACCATTCTTAATTCCGA+AGG + Chr3:97218201-97218220 None:intergenic 35.0%
AAGATCATTCTTGATACCGA+CGG + Chr3:97218311-97218330 None:intergenic 35.0%
AAGGGACATTAAACCGAAAA+AGG + Chr3:97218182-97218201 None:intergenic 35.0%
ACATGATAAAGAAGTGAGTC+CGG + Chr3:97216922-97216941 None:intergenic 35.0%
ACCGTCTTTAGTAGTAAGAA+AGG + Chr3:97216950-97216969 None:intergenic 35.0%
ACGTTTGCATGACAAAGATT+GGG - Chr3:97219271-97219290 MsG0380017513.01.T01:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG - Chr3:97218702-97218721 MsG0380017513.01.T01:intron 35.0%
AGAACACTCTTAATTCCGAA+GGG + Chr3:97218147-97218166 None:intergenic 35.0%
AGACCATTCTTAATTCCGAA+GGG + Chr3:97218200-97218219 None:intergenic 35.0%
AGTGAGGGAAGATAAAAGTA+TGG + Chr3:97217321-97217340 None:intergenic 35.0%
ATCTAATTTGAGGACTGACA+AGG + Chr3:97217277-97217296 None:intergenic 35.0%
ATGTGGTCCTATCTAATTTG+AGG + Chr3:97217287-97217306 None:intergenic 35.0%
ATTTGACTGCTTCATGTGTT+TGG - Chr3:97219594-97219613 MsG0380017513.01.T01:CDS 35.0%
CATTTGACTGTGTATGTGTA+TGG - Chr3:97219224-97219243 MsG0380017513.01.T01:intron 35.0%
CGTCAACACAAGTCAAAAAA+GGG + Chr3:97218007-97218026 None:intergenic 35.0%
CTAAACACAAATTCCCATGT+TGG - Chr3:97217488-97217507 MsG0380017513.01.T01:CDS 35.0%
CTATGAGTACTTATTCAAGG+GGG + Chr3:97218942-97218961 None:intergenic 35.0%
GAAAGAAGGCAATGTCATTA+TGG + Chr3:97217238-97217257 None:intergenic 35.0%
GAAGGGACATATATTATCGA+AGG + Chr3:97218236-97218255 None:intergenic 35.0%
GACAACTCAATGAAACTCTT+TGG + Chr3:97217964-97217983 None:intergenic 35.0%
GAGAATTACACCCTCAAATA+TGG + Chr3:97218541-97218560 None:intergenic 35.0%
GGTCTTAGTACCATATTTGA+GGG - Chr3:97218528-97218547 MsG0380017513.01.T01:intron 35.0%
GTAGTGCCATATTGATACTT+TGG - Chr3:97218402-97218421 MsG0380017513.01.T01:intron 35.0%
GTATGGGATTTCATTCAATG+TGG + Chr3:97217304-97217323 None:intergenic 35.0%
GTGACATATTGATCGGTAAT+TGG - Chr3:97219784-97219803 MsG0380017513.01.T01:CDS 35.0%
GTGGTTTCAGTATTAAAGAG+TGG - Chr3:97218507-97218526 MsG0380017513.01.T01:intron 35.0%
GTTGTGAAACCAATCAAACT+CGG + Chr3:97218868-97218887 None:intergenic 35.0%
TAATTGCAGTTCAAAAGAGG+AGG + Chr3:97219651-97219670 None:intergenic 35.0%
TATCTACCGAAGTTGTTACT+AGG + Chr3:97218711-97218730 None:intergenic 35.0%
TATGTACCCCCATTAATTAG+AGG + Chr3:97217604-97217623 None:intergenic 35.0%
TATTAAGGAAGCAGCACTTA+AGG + Chr3:97217134-97217153 None:intergenic 35.0%
TCGTCAACACAAGTCAAAAA+AGG + Chr3:97218008-97218027 None:intergenic 35.0%
TGCAAAGCTCCAAATGAAAA+AGG - Chr3:97219460-97219479 MsG0380017513.01.T01:CDS 35.0%
TGCAGTTGTATCTAGGAATT+TGG + Chr3:97219444-97219463 None:intergenic 35.0%
TGTCAGTCCTCAAATTAGAT+AGG - Chr3:97217277-97217296 MsG0380017513.01.T01:intron 35.0%
TTATTCCTACCGAGTTTGAT+TGG - Chr3:97218856-97218875 MsG0380017513.01.T01:intron 35.0%
TTTGACTGCTTCATGTGTTT+GGG - Chr3:97219595-97219614 MsG0380017513.01.T01:CDS 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG - Chr3:97217964-97217983 MsG0380017513.01.T01:CDS 35.0%
! AAGTGAGCATGTTGATAGAT+GGG + Chr3:97219330-97219349 None:intergenic 35.0%
! AATTCTCGAACGGTTTTCTA+CGG - Chr3:97218554-97218573 MsG0380017513.01.T01:intron 35.0%
! AGTCTACCTTGCACAATTTT+GGG - Chr3:97218639-97218658 MsG0380017513.01.T01:intron 35.0%
! GTGAGGGAAGATAAAAGTAT+GGG + Chr3:97217320-97217339 None:intergenic 35.0%
! TAAGTGAGCATGTTGATAGA+TGG + Chr3:97219331-97219350 None:intergenic 35.0%
! TAGTCTACCTTGCACAATTT+TGG - Chr3:97218638-97218657 MsG0380017513.01.T01:intron 35.0%
! TCAATAGAGGATTTTGAGCA+CGG + Chr3:97219085-97219104 None:intergenic 35.0%
! TGGTCTTAGTACCATATTTG+AGG - Chr3:97218527-97218546 MsG0380017513.01.T01:intron 35.0%
! TGTGTATGTGTATGGTTTTC+AGG - Chr3:97219232-97219251 MsG0380017513.01.T01:intron 35.0%
! TTAAAGCATCTTGAAAGGGT+TGG + Chr3:97217044-97217063 None:intergenic 35.0%
! TTTGGCACTCTGAATTTTCA+TGG + Chr3:97219426-97219445 None:intergenic 35.0%
! TTTTCGGTTTAATGTCCCTT+CGG - Chr3:97218182-97218201 MsG0380017513.01.T01:intron 35.0%
!! TTTTTAAGCGTACATCCTGT+TGG - Chr3:97217438-97217457 MsG0380017513.01.T01:intron 35.0%
!!! CGATTTTAATTCAGCTCAAC+TGG + Chr3:97219764-97219783 None:intergenic 35.0%
!!! TACGGTGGATATGTTGTTTT+TGG + Chr3:97218771-97218790 None:intergenic 35.0%
AAAAAGTGGAAGTCCCACAT+CGG - Chr3:97217536-97217555 MsG0380017513.01.T01:CDS 40.0%
AAGTGAAGGACTTTGAGTGA+GGG + Chr3:97217336-97217355 None:intergenic 40.0%
ACAATGTTGTCAAGTGTACC+GGG + Chr3:97219026-97219045 None:intergenic 40.0%
AGATCATTCTTGATACCGAC+GGG + Chr3:97218310-97218329 None:intergenic 40.0%
AGTTGCAGAGATCAATGATG+AGG + Chr3:97217206-97217225 None:intergenic 40.0%
ATCATTGATCTCTGCAACTC+AGG - Chr3:97217207-97217226 MsG0380017513.01.T01:intron 40.0%
ATGAGTTGTGAGATCCAAAG+TGG + Chr3:97217006-97217025 None:intergenic 40.0%
ATTTCCACACATGTTCCAAC+AGG + Chr3:97217456-97217475 None:intergenic 40.0%
CAACACAAGTCAAAAAAGGG+AGG + Chr3:97218004-97218023 None:intergenic 40.0%
CACCGTATTCAAAAGAAGAG+AGG - Chr3:97218784-97218803 MsG0380017513.01.T01:intron 40.0%
GACAATGTTGTCAAGTGTAC+CGG + Chr3:97219027-97219046 None:intergenic 40.0%
GGACAGAAAGGAGTAGAAAA+AGG + Chr3:97218126-97218145 None:intergenic 40.0%
GGAGTTGACGAAATTGGAAA+AGG + Chr3:97217067-97217086 None:intergenic 40.0%
GGGGTGTACCTCTAATTAAT+GGG - Chr3:97217593-97217612 MsG0380017513.01.T01:intron 40.0%
GGGTGTACCTCTAATTAATG+GGG - Chr3:97217594-97217613 MsG0380017513.01.T01:intron 40.0%
GGTGTACCTCTAATTAATGG+GGG - Chr3:97217595-97217614 MsG0380017513.01.T01:intron 40.0%
GTCTTAGCACCATAATAGAG+TGG - Chr3:97218466-97218485 MsG0380017513.01.T01:intron 40.0%
GTGGTAACACCATATTTGAG+TGG - Chr3:97218377-97218396 MsG0380017513.01.T01:intron 40.0%
GTTTCACAATTTAACCCGCA+TGG - Chr3:97219049-97219068 MsG0380017513.01.T01:intron 40.0%
TGAAACCAATCAAACTCGGT+AGG + Chr3:97218864-97218883 None:intergenic 40.0%
TGGAATAAACAATGTCCCGT+CGG - Chr3:97218292-97218311 MsG0380017513.01.T01:intron 40.0%
TGTCCCTTCGGAATTAAGAA+TGG - Chr3:97218194-97218213 MsG0380017513.01.T01:intron 40.0%
TTAATTCCGAAGGGACAGAA+AGG + Chr3:97218138-97218157 None:intergenic 40.0%
TTGTCAAACAAGTCGAAGGA+GGG + Chr3:97218095-97218114 None:intergenic 40.0%
TTGTCATGCAAACGTTCACT+TGG + Chr3:97219266-97219285 None:intergenic 40.0%
TTTATCTCGATTGGCGATGA+CGG + Chr3:97217088-97217107 None:intergenic 40.0%
TTTGCATGACAAAGATTGGG+AGG - Chr3:97219274-97219293 MsG0380017513.01.T01:intron 40.0%
! AACCAAGCTTTATGTAGAGC+TGG - Chr3:97219807-97219826 MsG0380017513.01.T01:CDS 40.0%
! CAATGAAACTCTTTGGTGTG+TGG + Chr3:97217957-97217976 None:intergenic 40.0%
! CTCTCTTCTTTTGAATACGG+TGG + Chr3:97218786-97218805 None:intergenic 40.0%
! TCGTTTGGAATTGAAAGCTG+CGG + Chr3:97216880-97216899 None:intergenic 40.0%
! TTGAGGGTGTAATTCTCGAA+CGG - Chr3:97218544-97218563 MsG0380017513.01.T01:intron 40.0%
!! AACACTAGTTCTACCCAACA+TGG + Chr3:97217505-97217524 None:intergenic 40.0%
!! ACACTAGTTCTACCCAACAT+GGG + Chr3:97217504-97217523 None:intergenic 40.0%
!! AGGTAGGGTTTTATCTCGAT+TGG + Chr3:97217097-97217116 None:intergenic 40.0%
!! GTAGCTTATGGTTGATGAGA+AGG - Chr3:97218998-97219017 MsG0380017513.01.T01:intron 40.0%
!! GTTTGATTGGTTTCACAACG+TGG - Chr3:97218869-97218888 MsG0380017513.01.T01:intron 40.0%
!!! TAGCTGGACTTGTTTTATCC+TGG - Chr3:97218600-97218619 MsG0380017513.01.T01:intron 40.0%
ACAAGTCAAAAAAGGGAGGG+AGG + Chr3:97218048-97218067 None:intergenic 45.0%
ACATCCTGTTGGAACATGTG+TGG - Chr3:97217449-97217468 MsG0380017513.01.T01:intron 45.0%
AGACAGAATCAGTGCTTTGC+CGG - Chr3:97216900-97216919 MsG0380017513.01.T01:CDS 45.0%
AGCACTTAAGGTAGAACGAG+CGG + Chr3:97217122-97217141 None:intergenic 45.0%
CAAAGAGGTGGAAACCACTT+TGG - Chr3:97216989-97217008 MsG0380017513.01.T01:intron 45.0%
CAAGTCAAAAAAGGGAGGGA+GGG + Chr3:97218047-97218066 None:intergenic 45.0%
CAAGTGAAGGACTTTGAGTG+AGG + Chr3:97217337-97217356 None:intergenic 45.0%
CAGTTCAAAAGAGGAGGAAG+AGG + Chr3:97219645-97219664 None:intergenic 45.0%
CTGCCCGATTCTACAAGATT+TGG - Chr3:97217407-97217426 MsG0380017513.01.T01:intron 45.0%
CTTGTCAAACAAGTCGAAGG+AGG + Chr3:97218096-97218115 None:intergenic 45.0%
GCACTACCCAAAATTGTGCA+AGG + Chr3:97218648-97218667 None:intergenic 45.0%
GCACTACGACCACTCAAATA+TGG + Chr3:97218389-97218408 None:intergenic 45.0%
GCACTTCATCCATTGCAACT+AGG + Chr3:97219960-97219979 None:intergenic 45.0%
GGACTTGTCAAACAAGTCGA+AGG + Chr3:97218099-97218118 None:intergenic 45.0%
GGAGCTTTGCAGTTGTATCT+AGG + Chr3:97219451-97219470 None:intergenic 45.0%
GTCCAGCTCTACATAAAGCT+TGG + Chr3:97219812-97219831 None:intergenic 45.0%
GTGCTAAGACCACTCAACTA+TGG + Chr3:97218456-97218475 None:intergenic 45.0%
GTGGTAACACCATAGTTGAG+TGG - Chr3:97218444-97218463 MsG0380017513.01.T01:intron 45.0%
GTTCCTGCTTGGTTCAAACT+CGG + Chr3:97219742-97219761 None:intergenic 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - Chr3:97218129-97218148 MsG0380017513.01.T01:intron 45.0%
TGAGTACTTATTCAAGGGGG+AGG + Chr3:97218939-97218958 None:intergenic 45.0%
TTAAGGTAGAACGAGCGGAT+AGG + Chr3:97217117-97217136 None:intergenic 45.0%
! GGGGGTGTACCTCTAATTAA+TGG - Chr3:97217592-97217611 MsG0380017513.01.T01:intron 45.0%
! TAATGGGGGTACATAAGCAC+TGG - Chr3:97217609-97217628 MsG0380017513.01.T01:intron 45.0%
! TTTGGAATTGAAAGCTGCGG+CGG + Chr3:97216877-97216896 None:intergenic 45.0%
!! ATGGTTGATGAGAAGGTTCC+CGG - Chr3:97219005-97219024 MsG0380017513.01.T01:intron 45.0%
!! GATGACGGAGTTGACGAAAT+TGG + Chr3:97217073-97217092 None:intergenic 45.0%
!! GCACTGATTCTGTCTTCGTT+TGG + Chr3:97216895-97216914 None:intergenic 45.0%
!!! CTGGACTTGTTTTATCCTGG+AGG - Chr3:97218603-97218622 MsG0380017513.01.T01:intron 45.0%
!!! GACTTGTTTTATCCTGGAGG+CGG - Chr3:97218606-97218625 MsG0380017513.01.T01:intron 45.0%
!!! TTGATATATATTTTATTATT+TGG - Chr3:97217646-97217665 MsG0380017513.01.T01:intron 5.0%
ACGTCTTACAGAGAGCGATC+TGG - Chr3:97218674-97218693 MsG0380017513.01.T01:intron 50.0%
CAAGCATCCTCTCAAAGAGG+TGG - Chr3:97216977-97216996 MsG0380017513.01.T01:intron 50.0%
CAAGTCCAGCTACAACTGTG+CGG + Chr3:97218592-97218611 None:intergenic 50.0%
CCACAAGCATCCTCTCAAAG+AGG - Chr3:97216974-97216993 MsG0380017513.01.T01:intron 50.0%
GACTGCTTCATGTGTTTGGG+TGG - Chr3:97219598-97219617 MsG0380017513.01.T01:CDS 50.0%
GCTCTCTGTAAGACGTTTCG+TGG + Chr3:97218670-97218689 None:intergenic 50.0%
GTAGAACGAGCGGATAGGTA+GGG + Chr3:97217112-97217131 None:intergenic 50.0%
GTGGTTTCCACCTCTTTGAG+AGG + Chr3:97216987-97217006 None:intergenic 50.0%
GTGTGTGTTCCATCCGATGT+GGG + Chr3:97217552-97217571 None:intergenic 50.0%
GTTAACCGCACAGTTGTAGC+TGG - Chr3:97218584-97218603 MsG0380017513.01.T01:intron 50.0%
TGTGTGTGTTCCATCCGATG+TGG + Chr3:97217553-97217572 None:intergenic 50.0%
! ACTGACGGACCTAGTTGCAA+TGG - Chr3:97219948-97219967 MsG0380017513.01.T01:CDS 50.0%
! CCTCTTTGAGAGGATGCTTG+TGG + Chr3:97216977-97216996 None:intergenic 50.0%
! CTTTGAGAGGATGCTTGTGG+CGG + Chr3:97216974-97216993 None:intergenic 50.0%
!! GAAAGGGTTGGTCATCGAAG+CGG + Chr3:97217032-97217051 None:intergenic 50.0%
ACGGAAGATCAGCTCCATGC+GGG + Chr3:97219066-97219085 None:intergenic 55.0%
AGTGGAAGTCCCACATCGGA+TGG - Chr3:97217540-97217559 MsG0380017513.01.T01:CDS 55.0%
CACGGAAGATCAGCTCCATG+CGG + Chr3:97219067-97219086 None:intergenic 55.0%
CGTCCGAGTTTGAACCAAGC+AGG - Chr3:97219736-97219755 MsG0380017513.01.T01:CDS 55.0%
GGTAGAACGAGCGGATAGGT+AGG + Chr3:97217113-97217132 None:intergenic 55.0%
! CAGCTCAACTGGTTCCTGCT+TGG + Chr3:97219753-97219772 None:intergenic 55.0%
! CAACGTGGAGCGTTTGCGTG+TGG - Chr3:97218884-97218903 MsG0380017513.01.T01:intron 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - Chr3:97218611-97218630 MsG0380017513.01.T01:intron 60.0%
!! AGGGTTGGTCATCGAAGCGG+AGG + Chr3:97217029-97217048 None:intergenic 60.0%
CTATCAACCACGCCGCCTCC+AGG + Chr3:97218621-97218640 None:intergenic 65.0%
! CGTGGAGCGTTTGCGTGTGG+AGG - Chr3:97218887-97218906 MsG0380017513.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 97216865 97219987 97216865 ID=MsG0380017513.01;Name=MsG0380017513.01
Chr3 mRNA 97216865 97219987 97216865 ID=MsG0380017513.01.T01;Parent=MsG0380017513.01;Name=MsG0380017513.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0|0|1|1|1|5|0|361
Chr3 exon 97219387 97219987 97219387 ID=MsG0380017513.01.T01:exon:16334;Parent=MsG0380017513.01.T01
Chr3 exon 97217944 97218014 97217944 ID=MsG0380017513.01.T01:exon:16333;Parent=MsG0380017513.01.T01
Chr3 exon 97217683 97217850 97217683 ID=MsG0380017513.01.T01:exon:16332;Parent=MsG0380017513.01.T01
Chr3 exon 97217481 97217598 97217481 ID=MsG0380017513.01.T01:exon:16331;Parent=MsG0380017513.01.T01
Chr3 exon 97216865 97216992 97216865 ID=MsG0380017513.01.T01:exon:16330;Parent=MsG0380017513.01.T01
Chr3 CDS 97219387 97219987 97219387 ID=MsG0380017513.01.T01:cds;Parent=MsG0380017513.01.T01
Chr3 CDS 97217944 97218014 97217944 ID=MsG0380017513.01.T01:cds;Parent=MsG0380017513.01.T01
Chr3 CDS 97217683 97217850 97217683 ID=MsG0380017513.01.T01:cds;Parent=MsG0380017513.01.T01
Chr3 CDS 97217481 97217598 97217481 ID=MsG0380017513.01.T01:cds;Parent=MsG0380017513.01.T01
Chr3 CDS 97216865 97216992 97216865 ID=MsG0380017513.01.T01:cds;Parent=MsG0380017513.01.T01
Gene Sequence

>MsG0380017513.01.T01

ATGTGGCAGCCGCCGCAGCTTTCAATTCCAAACGAAGACAGAATCAGTGCTTTGCCGGACTCACTTCTTTATCATGTTCTTTCCTTTCTTACTACTAAAGACGGTGCCGCCACAAGCATCCTCTCAAAGAGGTGGAAACCACTTTGGATCTCACAACTCATCCTCCGCTTCGATGACCAACCCTTTCAAGATGCTTTAACCTTTTCCAATTTCGTCAACTCCGTCATCGCCAATCGAGATAAAACCCTACCTATCCGCTCGTTCTACCTTAAGTGCTGCTTCCTTAATAGAGATATCCATGATTTTCTTTATACTGCTGTAAAAAGCGGAGTTGAAAACCTCATCATTGATCTCTGCAACTCAGGATACTCCATAATGACATTGCCTTCTTTCATTCTTAGTACTAAAACCTTGTCAGTCCTCAAATTAGATAGGACCACATTGAATGAAATCCCATACTTTTATCTTCCCTCACTCAAAGTCCTTCACTTGAATATCGTCAAATTCAGATATTATGAATATCTCTTGAAGCTTTTATCTGGCTGCCCGATTCTACAAGATTTGGAAACCGAATTTTTAAGCGTACATCCTGTTGGAACATCAAATATTTGTAATGTTTTTATTCCTACCGAGTTTGATTGGTTTCACAACGTGGAGCGTTTGCGTGTGGAGCTTATGGTTGATGAGAAGGTTCCCGGTACACTTGACAACATTGTCATGTTTCACAATTTAACCCGCATGGAGCTGATCTTCCGTGCTCAAAATCCTCTATTGACATTTAAGTGTCTCATGAAGTTGCTTCAATATTGTCCCAAACTTCAAATTCTTATCATTGATGAGGTTATTACACCAAGTGAACGTTTGCATGACAAAGATTGGGAGGAACCACAAATTGTTCCAAAATGTCTTTTATCCCATCTATCAACATGCTCACTTAGAAATTATAGGGGCATCACTTATGAAGTTAAATTAGCAAAACTTGATGAGCTTAATAAGAATGCATCGCAAAATCAGTTGCAATTTCCAGCAAAGAAAAAATCTGTTTTACTGACGGACCTAGTTGCAATGGATGAAGTGCGAAAGTAA
Protein sequence

>MsG0380017513.01.T01

MWQPPQLSIPNEDRISALPDSLLYHVLSFLTTKDGAATSILSKRWKPLWISQLILRFDDQPFQDALTFSNFVNSVIANRDKTLPIRSFYLKCCFLNRDIHDFLYTAVKSGVENLIIDLCNSGYSIMTLPSFILSTKTLSVLKLDRTTLNEIPYFYLPSLKVLHLNIVKFRYYEYLLKLLSGCPILQDLETEFLSVHPVGTSNICNVFIPTEFDWFHNVERLRVELMVDEKVPGTLDNIVMFHNLTRMELIFRAQNPLLTFKCLMKLLQYCPKLQILIIDEVITPSERLHDKDWEEPQIVPKCLLSHLSTCSLRNYRGITYEVKLAKLDELNKNASQNQLQFPAKKKSVLLTDLVAMDEVRK*