AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041629.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041629.01.T01 MTR_7g114710 72.398 221 38 3 1 198 1 221 5.70e-102 298
MsG0780041629.01.T01 MTR_3g023630 50.980 204 77 3 9 190 4 206 5.83e-54 176
MsG0780041629.01.T01 MTR_3g105060 51.813 193 71 3 4 175 5 196 1.35e-52 172
MsG0780041629.01.T01 MTR_7g098480 48.515 202 77 6 1 176 1 201 1.49e-39 140
MsG0780041629.01.T01 MTR_1g041245 42.487 193 88 3 4 174 2 193 9.72e-39 137
MsG0780041629.01.T01 MTR_7g056447 45.405 185 80 4 6 170 2 185 2.49e-38 134
MsG0780041629.01.T01 MTR_7g032380 43.299 194 87 4 4 175 2 194 1.22e-37 133
MsG0780041629.01.T01 MTR_7g098510 45.000 200 83 5 1 174 1 199 4.04e-37 133
MsG0780041629.01.T01 MTR_3g040700 42.714 199 89 4 1 175 31 228 3.26e-35 129
MsG0780041629.01.T01 MTR_3g467400 39.500 200 81 5 12 173 2 199 5.96e-35 126
MsG0780041629.01.T01 MTR_3g036250 43.455 191 77 6 12 175 4 190 3.46e-34 124
MsG0780041629.01.T01 MTR_8g085430 39.801 201 91 4 4 175 2 201 5.57e-34 123
MsG0780041629.01.T01 MTR_7g115270 39.901 203 91 4 3 175 2 203 3.39e-33 122
MsG0780041629.01.T01 MTR_3g108150 41.304 184 92 1 8 175 8 191 4.29e-33 122
MsG0780041629.01.T01 MTR_1g095750 63.158 95 33 1 2 94 35 129 8.07e-33 115
MsG0780041629.01.T01 MTR_7g098570 45.213 188 80 5 8 174 16 201 1.70e-32 122
MsG0780041629.01.T01 MTR_7g033990 38.384 198 90 4 4 173 2 195 6.21e-30 114
MsG0780041629.01.T01 MTR_0492s0020 42.623 183 88 4 8 175 81 261 5.95e-29 112
MsG0780041629.01.T01 MTR_0492s0020 60.377 53 20 1 8 60 8 59 9.12e-12 63.5
MsG0780041629.01.T01 MTR_0543s0010 42.623 183 88 4 8 175 81 261 8.69e-29 111
MsG0780041629.01.T01 MTR_0543s0010 55.000 60 26 1 1 60 1 59 9.50e-12 63.5
MsG0780041629.01.T01 MTR_7g088260 40.415 193 90 4 1 174 84 270 1.36e-28 111
MsG0780041629.01.T01 MTR_7g034115 41.089 202 96 3 4 183 2 202 2.46e-28 109
MsG0780041629.01.T01 MTR_7g056433 40.102 197 90 5 6 175 2 197 2.67e-28 109
MsG0780041629.01.T01 MTR_3g087260 41.420 169 90 3 13 175 12 177 2.99e-28 110
MsG0780041629.01.T01 MTR_7g033945 40.000 170 77 3 4 148 2 171 7.49e-28 103
MsG0780041629.01.T01 MTR_2g007360 41.477 176 83 8 8 173 7 172 2.48e-26 103
MsG0780041629.01.T01 MTR_3g109982 38.547 179 93 2 13 174 13 191 2.74e-26 105
MsG0780041629.01.T01 MTR_4g134150 39.896 193 95 7 2 177 3 191 3.03e-26 100
MsG0780041629.01.T01 MTR_3g110010 38.547 179 93 2 13 174 13 191 3.41e-26 105
MsG0780041629.01.T01 MTR_7g034110 39.594 197 90 5 4 174 2 195 4.00e-26 103
MsG0780041629.01.T01 MTR_3g108560 38.919 185 91 4 8 174 14 194 4.62e-26 102
MsG0780041629.01.T01 MTR_7g033915 37.566 189 100 5 4 182 2 182 7.41e-26 102
MsG0780041629.01.T01 MTR_3g108560 38.547 179 89 3 13 174 20 194 1.23e-25 102
MsG0780041629.01.T01 MTR_3g107100 36.559 186 94 3 13 175 11 195 3.21e-25 101
MsG0780041629.01.T01 MTR_7g098590 58.824 85 35 0 7 91 12 96 3.44e-25 95.5
MsG0780041629.01.T01 MTR_5g073420 36.126 191 97 7 11 176 9 199 9.46e-25 99.8
MsG0780041629.01.T01 MTR_3g095600 37.143 175 99 5 11 178 2 172 9.90e-25 98.6
MsG0780041629.01.T01 MTR_5g008950 37.363 182 84 5 15 173 1 175 1.52e-24 99.4
MsG0780041629.01.T01 MTR_3g099830 39.891 183 96 6 3 173 2 182 7.20e-24 97.4
MsG0780041629.01.T01 MTR_7g032370 35.465 172 89 3 25 175 2 172 1.14e-23 96.7
MsG0780041629.01.T01 MTR_7g056420 38.068 176 88 4 7 175 3 164 1.30e-23 98.2
MsG0780041629.01.T01 MTR_7g056430 38.068 176 88 4 7 175 3 164 1.30e-23 98.2
MsG0780041629.01.T01 MTR_1g108820 38.587 184 88 5 10 172 5 184 1.84e-23 96.3
MsG0780041629.01.T01 MTR_1g108820 38.587 184 88 5 10 172 5 184 1.86e-23 95.9
MsG0780041629.01.T01 MTR_6g011460 35.160 219 103 7 12 191 45 263 2.97e-23 96.3
MsG0780041629.01.T01 MTR_1g085120 36.364 187 93 6 13 175 179 363 3.42e-23 96.3
MsG0780041629.01.T01 MTR_1g085120 36.364 187 93 6 13 175 92 276 3.90e-23 96.3
MsG0780041629.01.T01 MTR_1g085120 36.364 187 93 6 13 175 167 351 4.10e-23 96.3
MsG0780041629.01.T01 MTR_3g107120 35.149 202 87 4 13 175 9 205 4.71e-23 95.5
MsG0780041629.01.T01 MTR_5g073340 35.758 165 101 2 12 176 7 166 7.09e-23 93.6
MsG0780041629.01.T01 MTR_3g082890 38.071 197 93 8 3 173 4 197 1.11e-22 94.7
MsG0780041629.01.T01 MTR_3g082890 38.071 197 93 8 3 173 84 277 1.17e-22 94.7
MsG0780041629.01.T01 MTR_5g061680 34.184 196 102 5 4 174 2 195 6.22e-22 91.3
MsG0780041629.01.T01 MTR_7g055943 33.333 189 100 5 11 175 38 224 2.07e-21 90.9
MsG0780041629.01.T01 MTR_5g073370 32.973 185 98 2 13 172 5 188 2.91e-21 90.1
MsG0780041629.01.T01 MTR_5g008920 35.829 187 94 5 11 175 10 192 1.16e-20 88.6
MsG0780041629.01.T01 MTR_6g022500 34.450 209 103 8 12 196 100 298 1.77e-20 88.6
MsG0780041629.01.T01 MTR_7g007340 38.764 178 98 4 1 173 1 172 2.16e-20 87.8
MsG0780041629.01.T01 MTR_7g026500 34.184 196 98 7 10 175 11 205 2.63e-20 87.8
MsG0780041629.01.T01 MTR_5g083890 34.300 207 93 6 10 174 3 208 3.71e-20 87.8
MsG0780041629.01.T01 MTR_7g033940 50.000 82 41 0 12 93 93 174 3.78e-20 84.7
MsG0780041629.01.T01 MTR_6g044560 31.651 218 100 6 5 173 170 387 5.18e-20 87.4
MsG0780041629.01.T01 MTR_8g062310 31.771 192 107 6 1 173 15 201 7.81e-20 86.7
MsG0780041629.01.T01 MTR_4g039440 35.676 185 94 4 12 175 33 213 1.00e-19 86.3
MsG0780041629.01.T01 MTR_5g058100 34.375 192 105 4 8 178 4 195 1.60e-19 85.5
MsG0780041629.01.T01 MTR_6g044572 31.754 211 95 6 12 173 1 211 1.84e-19 85.5
MsG0780041629.01.T01 MTR_1g066830 37.433 187 92 7 11 174 6 190 3.37e-19 84.7
MsG0780041629.01.T01 MTR_7g056277 36.842 190 89 6 13 175 259 444 5.15e-19 84.7
MsG0780041629.01.T01 MTR_7g007080 34.031 191 98 6 13 176 4 193 6.31e-19 84.0
MsG0780041629.01.T01 MTR_7g075820 33.493 209 94 6 10 174 3 210 9.48e-19 83.2
MsG0780041629.01.T01 MTR_1g107385 34.286 210 91 6 8 174 27 232 9.66e-19 83.6
MsG0780041629.01.T01 MTR_5g012840 37.647 170 85 6 37 185 13 182 1.30e-18 82.4
MsG0780041629.01.T01 MTR_7g060470 33.155 187 101 4 13 175 3 189 1.37e-18 82.8
MsG0780041629.01.T01 MTR_1089s0010 36.957 184 95 6 12 174 7 190 1.56e-18 82.8
MsG0780041629.01.T01 MTR_3g107160 32.804 189 98 5 13 174 10 196 1.59e-18 82.8
MsG0780041629.01.T01 MTR_7g056287 36.316 190 90 7 13 175 3 188 1.74e-18 82.4
MsG0780041629.01.T01 MTR_6g040270 36.022 186 88 6 15 174 10 190 2.61e-18 82.0
MsG0780041629.01.T01 MTR_1g108800 39.157 166 78 4 10 172 5 150 3.39e-18 81.3
MsG0780041629.01.T01 MTR_2g005990 35.678 199 91 7 11 173 4 201 5.66e-18 81.3
MsG0780041629.01.T01 MTR_6g022360 36.517 178 96 5 12 176 42 215 1.09e-17 80.5
MsG0780041629.01.T01 MTR_3g095640 51.136 88 37 3 11 92 16 103 1.36e-17 77.0
MsG0780041629.01.T01 MTR_4g080610 33.714 175 102 3 15 188 14 175 2.65e-17 79.0
MsG0780041629.01.T01 MTR_3g019240 34.320 169 87 5 13 158 26 193 3.42e-17 79.0
MsG0780041629.01.T01 MTR_3g023270 34.545 165 86 5 13 158 12 173 3.52e-17 78.6
MsG0780041629.01.T01 MTR_2g008310 36.413 184 93 6 12 173 1 182 3.75e-17 79.0
MsG0780041629.01.T01 MTR_2g007500 34.392 189 98 6 6 175 7 188 4.30e-17 78.2
MsG0780041629.01.T01 MTR_5g058000 36.022 186 99 7 12 177 7 192 4.45e-17 78.6
MsG0780041629.01.T01 MTR_2g007400 32.512 203 99 6 8 173 7 208 4.86e-17 78.6
MsG0780041629.01.T01 MTR_4g051510 35.948 153 86 4 13 153 35 187 1.39e-16 76.6
MsG0780041629.01.T01 MTR_5g013500 32.768 177 95 5 6 175 2 161 1.43e-16 77.0
MsG0780041629.01.T01 MTR_2g008320 35.079 191 98 7 8 173 47 236 1.72e-16 77.0
MsG0780041629.01.T01 MTR_3g114200 48.148 81 41 1 13 92 19 99 3.89e-16 72.8
MsG0780041629.01.T01 MTR_0571s0010 55.224 67 28 1 8 72 27 93 9.71e-16 70.5
MsG0780041629.01.T01 MTR_5g058350 34.969 163 99 4 12 173 7 163 1.35e-15 71.6
MsG0780041629.01.T01 MTR_8g070950 33.155 187 94 6 13 172 15 197 1.55e-15 74.3
MsG0780041629.01.T01 MTR_4g032730 33.981 206 98 9 4 173 6 209 2.17e-15 73.9
MsG0780041629.01.T01 MTR_7g083740 31.492 181 103 5 4 174 8 177 2.24e-15 73.6
MsG0780041629.01.T01 MTR_5g045510 32.609 184 104 5 11 174 10 193 3.81e-15 73.2
MsG0780041629.01.T01 MTR_2g020170 46.429 84 42 2 13 93 22 105 4.49e-15 69.3
MsG0780041629.01.T01 MTR_3g071850 32.447 188 100 6 12 173 23 209 7.52e-15 72.8
MsG0780041629.01.T01 MTR_8g058965 30.435 207 98 8 12 174 12 216 1.26e-14 71.6
MsG0780041629.01.T01 MTR_8g066650 34.000 150 82 3 13 146 80 228 2.66e-14 70.9
MsG0780041629.01.T01 MTR_2g007450 33.495 206 96 5 12 176 15 220 2.80e-14 70.9
MsG0780041629.01.T01 MTR_6g045333 34.921 189 96 8 12 174 60 247 2.91e-14 70.9
MsG0780041629.01.T01 MTR_6g018660 42.683 82 47 0 11 92 18 99 2.95e-14 70.5
MsG0780041629.01.T01 MTR_3g463830 43.750 80 45 0 13 92 63 142 3.13e-14 70.5
MsG0780041629.01.T01 MTR_4g092430 41.053 95 49 2 13 100 43 137 3.90e-14 70.5
MsG0780041629.01.T01 MTR_5g044800 32.558 172 90 4 13 158 30 201 4.06e-14 70.1
MsG0780041629.01.T01 MTR_5g087940 27.962 211 127 5 13 198 26 236 4.26e-14 70.1
MsG0780041629.01.T01 MTR_4g092430 41.053 95 49 2 13 100 43 137 4.60e-14 70.1
MsG0780041629.01.T01 MTR_7g081290 58.929 56 23 0 2 57 7 62 5.91e-14 68.6
MsG0780041629.01.T01 MTR_8g469020 27.404 208 105 7 10 172 4 210 7.80e-14 69.3
MsG0780041629.01.T01 MTR_8g467800 29.688 192 108 5 13 178 20 210 8.66e-14 68.9
MsG0780041629.01.T01 MTR_8g468810 31.429 210 97 9 13 183 25 226 8.80e-14 68.9
MsG0780041629.01.T01 MTR_3g036320 30.864 162 88 4 15 153 22 182 9.08e-14 68.9
MsG0780041629.01.T01 MTR_7g007370 35.152 165 82 4 12 173 16 158 1.03e-13 68.9
MsG0780041629.01.T01 MTR_8g468810 31.429 210 97 9 13 183 25 226 1.09e-13 68.6
MsG0780041629.01.T01 MTR_8g467800 29.688 192 108 5 13 178 20 210 1.15e-13 68.9
MsG0780041629.01.T01 MTR_8g468810 31.429 210 97 9 13 183 25 226 1.20e-13 68.6
MsG0780041629.01.T01 MTR_8g445780 29.048 210 98 6 1 172 1 197 1.60e-13 68.6
MsG0780041629.01.T01 MTR_1g492880 45.122 82 43 1 13 92 6 87 1.95e-13 64.3
MsG0780041629.01.T01 MTR_8g468810 31.429 210 97 9 13 183 25 226 1.99e-13 68.2
MsG0780041629.01.T01 MTR_5g044860 31.977 172 91 4 13 158 30 201 2.00e-13 68.2
MsG0780041629.01.T01 MTR_2g007090 33.136 169 65 3 5 173 2 122 2.24e-13 67.4
MsG0780041629.01.T01 MTR_8g468810 31.429 210 97 9 13 183 25 226 2.40e-13 68.2
MsG0780041629.01.T01 MTR_1g492880 45.122 82 43 1 13 92 6 87 2.74e-13 63.5
MsG0780041629.01.T01 MTR_2g083840 41.304 92 46 4 13 97 21 111 3.20e-13 67.8
MsG0780041629.01.T01 MTR_3g023470 32.414 145 81 4 13 141 15 158 4.18e-13 67.4
MsG0780041629.01.T01 MTR_3g113782 48.000 75 34 3 1 70 1 75 4.31e-13 62.8
MsG0780041629.01.T01 MTR_8g062080 32.308 195 91 9 13 173 23 210 4.44e-13 67.4
MsG0780041629.01.T01 MTR_3g463820 43.590 78 44 0 13 90 13 90 5.50e-13 66.2
MsG0780041629.01.T01 MTR_7g056020 32.632 190 106 4 1 175 1 183 6.03e-13 67.0
MsG0780041629.01.T01 MTR_8g062010 30.108 186 99 5 13 170 9 191 7.23e-13 66.6
MsG0780041629.01.T01 MTR_4g092980 30.636 173 92 5 14 158 15 187 7.73e-13 66.6
MsG0780041629.01.T01 MTR_0009s0080 31.694 183 102 8 15 174 20 202 7.95e-13 66.6
MsG0780041629.01.T01 MTR_4g024770 54.000 50 23 0 13 62 24 73 1.06e-12 61.2
MsG0780041629.01.T01 MTR_4g050250 27.488 211 105 7 11 174 19 228 1.33e-12 65.9
MsG0780041629.01.T01 MTR_4g051480 39.241 79 48 0 13 91 25 103 1.35e-12 66.2
MsG0780041629.01.T01 MTR_4g130200 34.161 161 95 3 13 172 20 170 1.36e-12 65.9
MsG0780041629.01.T01 MTR_4g092300 39.241 79 48 0 13 91 25 103 1.53e-12 65.9
MsG0780041629.01.T01 MTR_7g023310 28.333 180 109 4 13 172 26 205 1.59e-12 65.9
MsG0780041629.01.T01 MTR_4g092440 34.821 112 66 2 13 117 32 143 2.79e-12 65.1
MsG0780041629.01.T01 MTR_4g092440 34.821 112 66 2 13 117 32 143 3.07e-12 65.1
MsG0780041629.01.T01 MTR_3g019200 44.737 76 42 0 13 88 8 83 3.46e-12 64.7
MsG0780041629.01.T01 MTR_5g021550 39.080 87 46 1 13 92 19 105 4.48e-12 62.0
MsG0780041629.01.T01 MTR_1g094760 41.026 78 46 0 13 90 26 103 5.22e-12 64.3
MsG0780041629.01.T01 MTR_3g007790 37.778 90 56 0 13 102 25 114 5.92e-12 63.9
MsG0780041629.01.T01 MTR_3g007830 37.778 90 56 0 13 102 11 100 7.48e-12 63.5
MsG0780041629.01.T01 MTR_4g050940 31.579 171 92 4 13 158 67 237 8.42e-12 63.5
MsG0780041629.01.T01 MTR_7g084080 42.667 75 43 0 13 87 17 91 1.08e-11 62.8
MsG0780041629.01.T01 MTR_5g082930 49.123 57 29 0 15 71 17 73 1.13e-11 61.6
MsG0780041629.01.T01 MTR_5g039450 30.688 189 114 7 12 192 5 184 1.14e-11 63.2
MsG0780041629.01.T01 MTR_5g084070 33.889 180 102 5 12 175 12 190 1.18e-11 63.2
MsG0780041629.01.T01 MTR_4g045740 46.269 67 36 0 14 80 21 87 1.36e-11 61.6
MsG0780041629.01.T01 MTR_8g017280 40.845 71 42 0 13 83 36 106 1.42e-11 62.4
MsG0780041629.01.T01 MTR_3g008050 37.778 90 56 0 13 102 11 100 1.43e-11 62.8
MsG0780041629.01.T01 MTR_2g007100 65.854 41 14 0 12 52 1 41 1.57e-11 58.2
MsG0780041629.01.T01 MTR_1g053025 32.474 194 99 7 12 174 1 193 1.57e-11 62.8
MsG0780041629.01.T01 MTR_3g052940 37.736 106 59 2 13 111 28 133 1.78e-11 62.8
MsG0780041629.01.T01 MTR_8g468910 30.286 175 92 5 12 158 47 219 1.82e-11 62.4
MsG0780041629.01.T01 MTR_3g052940 37.736 106 59 2 13 111 28 133 1.83e-11 62.8
MsG0780041629.01.T01 MTR_1880s0010 32.298 161 93 4 6 159 9 160 1.89e-11 61.6
MsG0780041629.01.T01 MTR_8g017280 40.845 71 42 0 13 83 36 106 1.89e-11 62.4
MsG0780041629.01.T01 MTR_3g052940 37.736 106 59 2 13 111 28 133 2.11e-11 62.4
MsG0780041629.01.T01 MTR_3g019220 44.737 76 42 0 13 88 26 101 2.25e-11 62.4
MsG0780041629.01.T01 MTR_4g050930 31.293 147 84 5 13 142 29 175 2.33e-11 62.0
MsG0780041629.01.T01 MTR_8g014260 39.604 101 56 2 2 97 5 105 2.35e-11 62.4
MsG0780041629.01.T01 MTR_4g050930 31.293 147 84 5 13 142 29 175 2.39e-11 62.4
MsG0780041629.01.T01 MTR_4g051640 39.189 74 45 0 13 86 30 103 2.60e-11 59.7
MsG0780041629.01.T01 MTR_5g045170 31.795 195 111 7 3 175 4 198 2.69e-11 62.0
MsG0780041629.01.T01 MTR_4g024720 38.636 88 48 2 13 94 17 104 3.00e-11 60.5
MsG0780041629.01.T01 MTR_4g093690 30.270 185 101 6 13 171 18 200 3.55e-11 61.2
MsG0780041629.01.T01 MTR_8g014290 37.234 94 46 1 13 93 10 103 3.78e-11 59.3
MsG0780041629.01.T01 MTR_7g033470 66.667 42 14 0 11 52 12 53 4.26e-11 58.9
MsG0780041629.01.T01 MTR_4g045680 28.916 166 93 5 13 153 16 181 4.30e-11 61.2
MsG0780041629.01.T01 MTR_8g465650 28.042 189 103 5 1 158 1 187 5.37e-11 61.2
MsG0780041629.01.T01 MTR_2g100590 28.155 206 97 8 9 173 38 233 5.47e-11 61.2
MsG0780041629.01.T01 MTR_3g099900 31.548 168 93 5 13 158 18 185 5.68e-11 61.2
MsG0780041629.01.T01 MTR_3g052990 37.736 106 59 2 13 111 28 133 6.29e-11 60.8
MsG0780041629.01.T01 MTR_3g019180 40.909 88 52 0 13 100 25 112 6.46e-11 60.8
MsG0780041629.01.T01 MTR_2g100590 28.155 206 97 8 9 173 38 233 6.86e-11 60.8
MsG0780041629.01.T01 MTR_2g100590 28.155 206 97 8 9 173 38 233 6.97e-11 60.8
MsG0780041629.01.T01 MTR_8g465380 32.335 167 82 6 12 148 11 176 7.71e-11 60.5
MsG0780041629.01.T01 MTR_6g022390 40.217 92 44 2 12 92 4 95 7.82e-11 58.2
MsG0780041629.01.T01 MTR_3g005980 31.515 165 88 5 13 154 17 179 7.85e-11 60.5
MsG0780041629.01.T01 MTR_6g088705 37.273 110 60 2 13 113 19 128 8.57e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041629.01.T01 AT4G14096 36.413 184 92 5 13 172 8 190 1.99e-21 91.3
MsG0780041629.01.T01 AT4G14096 36.413 184 92 5 13 172 8 190 1.99e-21 91.3
MsG0780041629.01.T01 AT5G22670 31.500 200 118 5 4 185 2 200 7.21e-20 86.7
MsG0780041629.01.T01 AT4G14103 36.559 186 91 7 13 172 8 192 6.03e-17 78.6
MsG0780041629.01.T01 AT4G14103 36.559 186 91 7 13 172 8 192 8.31e-17 77.8
MsG0780041629.01.T01 AT4G14103 36.559 186 91 7 13 172 8 192 8.31e-17 77.8
MsG0780041629.01.T01 AT3G59200 33.511 188 96 7 13 172 7 193 1.07e-16 77.4
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 6 182 1.91e-16 77.0
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 6 182 1.91e-16 77.0
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 6 182 1.91e-16 77.0
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 6 182 1.91e-16 77.0
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 43 219 2.48e-16 76.6
MsG0780041629.01.T01 AT5G22700 30.899 178 104 3 13 172 43 219 2.51e-16 76.6
MsG0780041629.01.T01 AT4G26340 32.432 185 103 6 12 175 1 184 2.72e-16 76.6
MsG0780041629.01.T01 AT3G59200 33.511 188 96 7 13 172 7 193 2.75e-16 76.6
MsG0780041629.01.T01 AT1G16930 28.889 180 107 3 13 172 15 193 3.14e-16 76.6
MsG0780041629.01.T01 AT1G16930 28.889 180 107 3 13 172 15 193 3.14e-16 76.6
MsG0780041629.01.T01 AT1G16930 28.889 180 107 3 13 172 15 193 3.14e-16 76.6
MsG0780041629.01.T01 AT5G25850 31.522 184 103 5 12 176 19 198 7.18e-16 75.5
MsG0780041629.01.T01 AT4G00160 33.333 189 102 5 7 172 10 197 8.78e-16 75.1
MsG0780041629.01.T01 AT5G53635 31.492 181 100 6 15 173 2 180 4.76e-15 73.2
MsG0780041629.01.T01 AT3G59210 33.511 188 96 6 13 172 7 193 7.44e-15 72.4
MsG0780041629.01.T01 AT3G59210 33.511 188 96 6 13 172 7 193 7.44e-15 72.4
MsG0780041629.01.T01 AT3G59210 33.511 188 96 6 13 172 7 193 7.44e-15 72.4
MsG0780041629.01.T01 AT3G59210 33.511 188 96 6 13 172 7 193 7.44e-15 72.4
MsG0780041629.01.T01 AT3G59210 33.511 188 96 6 13 172 7 193 7.44e-15 72.4
MsG0780041629.01.T01 AT1G58310 33.953 215 91 8 6 175 4 212 7.72e-15 72.4
MsG0780041629.01.T01 AT5G56810 31.892 185 105 4 9 172 11 195 7.82e-15 71.6
MsG0780041629.01.T01 AT5G27750 31.088 193 104 6 9 172 1 193 8.42e-15 72.0
MsG0780041629.01.T01 AT5G56810 31.892 185 105 4 9 172 11 195 8.87e-15 72.4
MsG0780041629.01.T01 AT1G13780 31.795 195 102 7 9 172 6 200 8.93e-15 71.6
MsG0780041629.01.T01 AT4G00315 30.000 190 106 7 12 175 1 189 1.00e-14 72.0
MsG0780041629.01.T01 AT1G13780 31.795 195 102 7 9 172 6 200 1.02e-14 72.0
MsG0780041629.01.T01 AT5G27750 31.088 193 104 6 9 172 1 193 1.02e-14 72.0
MsG0780041629.01.T01 AT4G13965 31.892 185 107 6 6 172 3 186 1.29e-14 71.6
MsG0780041629.01.T01 AT5G56420 32.418 182 99 5 13 172 6 185 1.35e-14 71.6
MsG0780041629.01.T01 AT5G56420 32.418 182 99 5 13 172 6 185 1.35e-14 71.6
MsG0780041629.01.T01 AT5G56420 32.418 182 99 5 13 172 6 185 1.35e-14 71.6
MsG0780041629.01.T01 AT5G22660 32.597 181 97 6 13 172 13 189 1.54e-14 70.9
MsG0780041629.01.T01 AT4G10400 30.851 188 107 6 12 177 1 187 1.68e-14 71.2
MsG0780041629.01.T01 AT4G10400 30.851 188 107 6 12 177 1 187 1.68e-14 71.2
MsG0780041629.01.T01 AT4G10400 30.851 188 107 6 12 177 1 187 1.68e-14 71.2
MsG0780041629.01.T01 AT5G56820 32.973 185 99 5 13 177 15 194 1.89e-14 71.2
MsG0780041629.01.T01 AT5G22720 29.282 181 107 5 13 172 23 203 2.42e-14 70.9
MsG0780041629.01.T01 AT5G41840 34.000 200 89 8 13 172 14 210 2.63e-14 70.9
MsG0780041629.01.T01 AT1G66290 30.108 186 109 4 3 170 19 201 2.66e-14 70.9
MsG0780041629.01.T01 AT5G53640 29.834 181 100 5 13 172 22 196 3.66e-14 68.9
MsG0780041629.01.T01 AT2G26030 32.044 181 99 8 13 171 4 182 4.93e-14 70.1
MsG0780041629.01.T01 AT2G26030 32.044 181 99 8 13 171 4 182 4.93e-14 70.1
MsG0780041629.01.T01 AT2G26030 32.044 181 99 8 13 171 4 182 5.01e-14 70.1
MsG0780041629.01.T01 AT5G22660 32.597 181 97 6 13 172 13 189 5.38e-14 70.1
MsG0780041629.01.T01 AT5G18780 29.891 184 100 5 13 173 11 188 5.74e-14 70.1
MsG0780041629.01.T01 AT5G18780 29.891 184 100 5 13 173 11 188 5.74e-14 70.1
MsG0780041629.01.T01 AT5G18780 29.891 184 100 5 13 173 11 188 6.77e-14 69.7
MsG0780041629.01.T01 AT5G18780 29.891 184 100 5 13 173 11 188 6.77e-14 69.7
MsG0780041629.01.T01 AT5G56370 35.754 179 94 7 12 170 1 178 1.38e-13 68.2
MsG0780041629.01.T01 AT5G56370 35.754 179 94 7 12 170 1 178 1.44e-13 68.6
MsG0780041629.01.T01 AT5G56370 35.754 179 94 7 12 170 1 178 1.44e-13 68.6
MsG0780041629.01.T01 AT5G22610 31.053 190 96 7 13 172 18 202 1.58e-13 68.6
MsG0780041629.01.T01 AT5G22610 31.053 190 96 7 13 172 18 202 1.59e-13 68.6
MsG0780041629.01.T01 AT4G09920 30.481 187 99 7 12 172 1 182 2.08e-13 67.4
MsG0780041629.01.T01 AT4G09920 30.481 187 99 7 12 172 1 182 2.08e-13 67.4
MsG0780041629.01.T01 AT4G09920 30.481 187 99 7 12 172 1 182 2.08e-13 67.4
MsG0780041629.01.T01 AT3G59240 27.660 188 107 5 13 172 8 194 2.09e-13 68.2
MsG0780041629.01.T01 AT4G09920 30.601 183 104 6 12 172 1 182 3.34e-13 67.4
MsG0780041629.01.T01 AT4G09920 30.601 183 104 6 12 172 1 182 3.34e-13 67.4
MsG0780041629.01.T01 AT3G59250 31.515 165 96 5 13 172 7 159 3.42e-13 67.8
MsG0780041629.01.T01 AT5G53840 31.250 176 105 3 13 172 18 193 4.71e-13 67.4
MsG0780041629.01.T01 AT2G26860 30.542 203 108 7 12 185 1 199 7.45e-13 66.6
MsG0780041629.01.T01 AT2G26860 30.542 203 108 7 12 185 1 199 7.45e-13 66.6
MsG0780041629.01.T01 AT2G29930 32.022 178 102 5 13 172 12 188 1.26e-12 65.9
MsG0780041629.01.T01 AT2G29930 32.022 178 102 5 13 172 12 188 1.26e-12 65.9
MsG0780041629.01.T01 AT3G26922 30.622 209 112 8 13 189 14 221 1.38e-12 65.5
MsG0780041629.01.T01 AT3G26922 30.622 209 112 8 13 189 14 221 1.38e-12 65.5
MsG0780041629.01.T01 AT5G44490 27.604 192 114 4 6 173 10 200 1.46e-12 65.9
MsG0780041629.01.T01 AT4G15060 29.101 189 108 5 12 175 171 358 1.63e-12 65.9
MsG0780041629.01.T01 AT1G32375 28.372 215 125 8 12 198 1 214 1.74e-12 65.5
MsG0780041629.01.T01 AT1G32375 28.372 215 125 8 12 198 1 214 1.74e-12 65.5
MsG0780041629.01.T01 AT4G15060 28.947 190 107 5 12 175 25 212 1.83e-12 65.5
MsG0780041629.01.T01 AT1G78760 27.473 182 108 5 13 172 16 195 1.89e-12 65.5
MsG0780041629.01.T01 AT4G00320 34.343 198 90 8 13 172 13 208 2.01e-12 65.5
MsG0780041629.01.T01 AT5G02930 32.778 180 95 6 12 172 27 199 2.07e-12 65.5
MsG0780041629.01.T01 AT5G44490 27.604 192 114 4 6 173 10 200 2.07e-12 65.5
MsG0780041629.01.T01 AT1G48400 32.692 208 106 8 13 190 10 213 2.42e-12 65.1
MsG0780041629.01.T01 AT5G38392 32.292 192 83 8 12 176 1 172 2.67e-12 63.5
MsG0780041629.01.T01 AT1G48400 32.692 208 106 8 13 190 10 213 2.74e-12 65.1
MsG0780041629.01.T01 AT1G66310 31.868 182 100 6 12 172 18 196 8.98e-12 63.5
MsG0780041629.01.T01 AT1G78730 29.341 167 106 3 12 172 21 181 9.63e-12 63.5
MsG0780041629.01.T01 AT3G51530 30.978 184 104 5 13 177 30 209 9.81e-12 63.5
MsG0780041629.01.T01 AT3G52680 30.415 217 116 7 7 189 15 230 1.02e-11 63.2
MsG0780041629.01.T01 AT5G22730 29.834 181 105 6 13 172 28 207 1.07e-11 63.2
MsG0780041629.01.T01 AT5G41830 42.105 95 43 2 13 95 13 107 1.14e-11 63.2
MsG0780041629.01.T01 AT3G52680 30.493 223 108 8 7 189 15 230 1.18e-11 63.2
MsG0780041629.01.T01 AT5G22730 29.834 181 105 6 13 172 28 207 1.23e-11 63.2
MsG0780041629.01.T01 AT5G22730 29.834 181 105 6 13 172 28 207 1.23e-11 63.2
MsG0780041629.01.T01 AT1G69630 28.877 187 108 5 12 175 17 201 1.29e-11 63.2
MsG0780041629.01.T01 AT3G58940 41.304 92 42 2 12 92 1 91 1.54e-11 63.2
MsG0780041629.01.T01 AT3G58940 41.304 92 42 2 12 92 1 91 1.54e-11 63.2
MsG0780041629.01.T01 AT3G42770 33.508 191 86 8 18 172 4 189 1.59e-11 62.8
MsG0780041629.01.T01 AT3G58930 32.022 178 90 7 12 173 1 163 1.77e-11 62.8
MsG0780041629.01.T01 AT3G58930 32.022 178 90 7 12 173 1 163 1.77e-11 62.8
MsG0780041629.01.T01 AT5G44980 32.105 190 94 6 13 173 4 187 2.09e-11 62.0
MsG0780041629.01.T01 AT5G44980 32.105 190 94 6 13 173 4 187 2.09e-11 62.0
MsG0780041629.01.T01 AT5G44980 32.105 190 94 6 13 173 4 187 2.20e-11 62.4
MsG0780041629.01.T01 AT5G44980 32.105 190 94 6 13 173 4 187 2.20e-11 62.4
MsG0780041629.01.T01 AT1G55030 32.821 195 105 7 13 186 19 208 2.39e-11 62.4
MsG0780041629.01.T01 AT1G55030 32.821 195 105 7 13 186 9 198 2.41e-11 62.4
MsG0780041629.01.T01 AT3G58880 31.606 193 96 6 12 172 2 190 2.66e-11 62.0
MsG0780041629.01.T01 AT2G42720 35.354 198 89 9 12 175 1 193 3.92e-11 61.6
MsG0780041629.01.T01 AT3G59190 31.771 192 97 8 13 172 12 201 4.10e-11 61.6
MsG0780041629.01.T01 AT3G58930 40.217 92 43 2 12 92 1 91 4.49e-11 61.6
MsG0780041629.01.T01 AT3G58930 40.217 92 43 2 12 92 1 91 4.49e-11 61.6
MsG0780041629.01.T01 AT3G58930 40.217 92 43 2 12 92 1 91 4.49e-11 61.6
MsG0780041629.01.T01 AT1G60400 30.303 198 109 7 1 172 1 195 6.07e-11 61.2
MsG0780041629.01.T01 AT3G59190 31.771 192 97 8 13 172 12 201 6.41e-11 61.2
MsG0780041629.01.T01 AT1G21990 32.240 183 99 5 13 172 9 189 7.12e-11 60.8
MsG0780041629.01.T01 AT5G02920 32.584 178 97 8 13 173 28 199 8.04e-11 60.1
MsG0780041629.01.T01 AT3G03040 31.088 193 101 5 12 173 1 192 8.65e-11 60.8
MsG0780041629.01.T01 AT3G59230 29.231 195 102 5 13 172 12 205 9.19e-11 60.5

Find 33 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCCGTGGTTGCAGCAAATT+TGG 0.188427 7:+93234005 None:intergenic
AATATTGTGAAATTTCTATT+AGG 0.265934 7:-93233628 MsG0780041629.01.T01:CDS
AGAAGATTTGCAAACAGAAT+TGG 0.286588 7:-93233593 MsG0780041629.01.T01:CDS
CAAAGTTGTTGAAGGTTTCC+TGG 0.300585 7:+93233926 None:intergenic
AAATTACCTATATGCTTTCT+CGG 0.313380 7:-93233772 MsG0780041629.01.T01:CDS
TTTGCAAATCTTCTAGAATA+GGG 0.342655 7:+93233602 None:intergenic
GTTTGCAAATCTTCTAGAAT+AGG 0.351333 7:+93233601 None:intergenic
GGAAGATGAATTCTTCTTCC+GGG 0.369870 7:-93234104 None:intergenic
GGGAAGATGAATTCTTCTTC+CGG 0.374400 7:-93234105 None:intergenic
GAAGATTTGCAAACAGAATT+GGG 0.379844 7:-93233592 MsG0780041629.01.T01:CDS
CTTGACTTCTCCACATTTGA+GGG 0.408890 7:+93233834 None:intergenic
AGCAAATTTGGTTGGGTGAA+AGG 0.424814 7:+93234017 None:intergenic
AACCAAATTTGCTGCAACCA+CGG 0.427675 7:-93234007 MsG0780041629.01.T01:CDS
AAAGCTTTCAAAGTTGTTGA+AGG 0.432773 7:+93233918 None:intergenic
AGATAGAATCAGTGACTTGC+CGG 0.448475 7:-93234064 MsG0780041629.01.T01:CDS
ACCAAATTTGCTGCAACCAC+GGG 0.452284 7:-93234006 MsG0780041629.01.T01:CDS
TCTTGACTTCTCCACATTTG+AGG 0.454460 7:+93233833 None:intergenic
TTCTCCACATTTGAGGGTAA+AGG 0.469337 7:+93233840 None:intergenic
GTGGTTGCAGCAAATTTGGT+TGG 0.487309 7:+93234009 None:intergenic
CACATTTGAGGGTAAAGGAA+TGG 0.489631 7:+93233845 None:intergenic
GATTCTATCTACCGTGGGAA+TGG 0.491263 7:+93234077 None:intergenic
TGGTTGCAGCAAATTTGGTT+GGG 0.508278 7:+93234010 None:intergenic
ATATGACAAAGTATCGAATC+CGG 0.508309 7:+93234045 None:intergenic
TTATAACCGAGAAAGCATAT+AGG 0.516710 7:+93233766 None:intergenic
TACCGTGGGAATGGATCGCC+CGG 0.541732 7:+93234086 None:intergenic
TCTTGTTCTTGACTTTGACC+AGG 0.549679 7:-93233944 MsG0780041629.01.T01:CDS
CGGGCGTTCTCTCAAAGAGA+TGG 0.561533 7:-93233987 MsG0780041629.01.T01:CDS
CATTCCTTTACCCTCAAATG+TGG 0.562986 7:-93233844 MsG0780041629.01.T01:CDS
GTCACTGATTCTATCTACCG+TGG 0.623595 7:+93234071 None:intergenic
TCTCTTTGAGAGAACGCCCG+TGG 0.623866 7:+93233990 None:intergenic
TTCCGGGCGATCCATTCCCA+CGG 0.627676 7:-93234088 MsG0780041629.01.T01:CDS
CAAAGAGATGGAAACATGTG+TGG 0.638108 7:-93233975 MsG0780041629.01.T01:CDS
TCACTGATTCTATCTACCGT+GGG 0.644376 7:+93234072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTGTGAAATTTCTATT+AGG - Chr7:93233996-93234015 MsG0780041629.01.T01:CDS 15.0%
!!! AGAAATTTCACAATATTTTC+AGG + Chr7:93233993-93234012 None:intergenic 20.0%
! AAATTACCTATATGCTTTCT+CGG - Chr7:93233852-93233871 MsG0780041629.01.T01:CDS 25.0%
!!! TTTGCAAATCTTCTAGAATA+GGG + Chr7:93234025-93234044 None:intergenic 25.0%
AAAGCTTTCAAAGTTGTTGA+AGG + Chr7:93233709-93233728 None:intergenic 30.0%
AGAAGATTTGCAAACAGAAT+TGG - Chr7:93234031-93234050 MsG0780041629.01.T01:CDS 30.0%
GAAGATTTGCAAACAGAATT+GGG - Chr7:93234032-93234051 MsG0780041629.01.T01:CDS 30.0%
! ACATATTTTGCATGAAGAAG+AGG - Chr7:93234094-93234113 MsG0780041629.01.T01:CDS 30.0%
! TTATAACCGAGAAAGCATAT+AGG + Chr7:93233861-93233880 None:intergenic 30.0%
!! ATATGACAAAGTATCGAATC+CGG + Chr7:93233582-93233601 None:intergenic 30.0%
!! GTTTGCAAATCTTCTAGAAT+AGG + Chr7:93234026-93234045 None:intergenic 30.0%
!!! AATTGAAGAATTTTGAGACG+AGG + Chr7:93233948-93233967 None:intergenic 30.0%
!! GAAATCGTTTTGAGCAAACT+AGG + Chr7:93234062-93234081 None:intergenic 35.0%
AGCAAATTTGGTTGGGTGAA+AGG + Chr7:93233610-93233629 None:intergenic 40.0%
CAAAGAGATGGAAACATGTG+TGG - Chr7:93233649-93233668 MsG0780041629.01.T01:CDS 40.0%
CAAAGTTGTTGAAGGTTTCC+TGG + Chr7:93233701-93233720 None:intergenic 40.0%
CACATTTGAGGGTAAAGGAA+TGG + Chr7:93233782-93233801 None:intergenic 40.0%
CATTCCTTTACCCTCAAATG+TGG - Chr7:93233780-93233799 MsG0780041629.01.T01:CDS 40.0%
CTTGACTTCTCCACATTTGA+GGG + Chr7:93233793-93233812 None:intergenic 40.0%
TCTTGACTTCTCCACATTTG+AGG + Chr7:93233794-93233813 None:intergenic 40.0%
TCTTGTTCTTGACTTTGACC+AGG - Chr7:93233680-93233699 MsG0780041629.01.T01:CDS 40.0%
TGGTTGCAGCAAATTTGGTT+GGG + Chr7:93233617-93233636 None:intergenic 40.0%
TTCTCCACATTTGAGGGTAA+AGG + Chr7:93233787-93233806 None:intergenic 40.0%
! AGATAGAATCAGTGACTTGC+CGG - Chr7:93233560-93233579 MsG0780041629.01.T01:CDS 40.0%
! CTTTTTGTCTCGCAACTTGA+TGG + Chr7:93233751-93233770 None:intergenic 40.0%
!! AACCAAATTTGCTGCAACCA+CGG - Chr7:93233617-93233636 MsG0780041629.01.T01:CDS 40.0%
!! TCACTGATTCTATCTACCGT+GGG + Chr7:93233555-93233574 None:intergenic 40.0%
GATTCTATCTACCGTGGGAA+TGG + Chr7:93233550-93233569 None:intergenic 45.0%
GTGGTTGCAGCAAATTTGGT+TGG + Chr7:93233618-93233637 None:intergenic 45.0%
!! ACCAAATTTGCTGCAACCAC+GGG - Chr7:93233618-93233637 MsG0780041629.01.T01:CDS 45.0%
!! GTCACTGATTCTATCTACCG+TGG + Chr7:93233556-93233575 None:intergenic 45.0%
CGGGCGTTCTCTCAAAGAGA+TGG - Chr7:93233637-93233656 MsG0780041629.01.T01:CDS 55.0%
GCCCGTGGTTGCAGCAAATT+TGG + Chr7:93233622-93233641 None:intergenic 55.0%
! TCTCTTTGAGAGAACGCCCG+TGG + Chr7:93233637-93233656 None:intergenic 55.0%
TACCGTGGGAATGGATCGCC+CGG + Chr7:93233541-93233560 None:intergenic 60.0%
TTCCGGGCGATCCATTCCCA+CGG - Chr7:93233536-93233555 MsG0780041629.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 93233525 93234121 93233525 ID=MsG0780041629.01;Name=MsG0780041629.01
Chr7 mRNA 93233525 93234121 93233525 ID=MsG0780041629.01.T01;Parent=MsG0780041629.01;Name=MsG0780041629.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|198
Chr7 exon 93233525 93234121 93233525 ID=MsG0780041629.01.T01:exon:20380;Parent=MsG0780041629.01.T01
Chr7 CDS 93233525 93234121 93233525 ID=MsG0780041629.01.T01:cds;Parent=MsG0780041629.01.T01
Gene Sequence

>MsG0780041629.01.T01

ATGAATTCTTCTTCCGGGCGATCCATTCCCACGGTAGATAGAATCAGTGACTTGCCGGATTCGATACTTTGTCATATTCTCTCCTTTCACCCAACCAAATTTGCTGCAACCACGGGCGTTCTCTCAAAGAGATGGAAACATGTGTGGCTCGCAGTTCTTGTTCTTGACTTTGACCAGGAAACCTTCAACAACTTTGAAAGCTTTTGCAAATTTGTCTGCTTAACCATCAAGTTGCGAGACAAAAAGAATTCAATCCATTCCTTTACCCTCAAATGTGGAGAAGTCAAGATTCTTAACTTCGACATGTCTGATAAAAAGCGTCAAATCAAATTACCTATATGCTTTCTCGGTTATAACAAAACACTTGAAGTTCTTAAGTTGTCAAACACACAAATGAGAGATTTTGATCAAGTGAATTTTCCTCGTCTCAAAATTCTTCAATTGAATGATGTTTTTTTCAAATCTCCTGAAAATATTGTGAAATTTCTATTAGGTTGCCCTATTCTAGAAGATTTGCAAACAGAATTGGGTTTACCTAGTTTGCTCAAAACGATTTCTGATTCTAATGCACATATTTTGCATGAAGAAGAGGTATGA
Protein sequence

>MsG0780041629.01.T01

MNSSSGRSIPTVDRISDLPDSILCHILSFHPTKFAATTGVLSKRWKHVWLAVLVLDFDQETFNNFESFCKFVCLTIKLRDKKNSIHSFTLKCGEVKILNFDMSDKKRQIKLPICFLGYNKTLEVLKLSNTQMRDFDQVNFPRLKILQLNDVFFKSPENIVKFLLGCPILEDLQTELGLPSLLKTISDSNAHILHEEEV*