Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380012590.01.T01 | KEH43359.1 | 68.439 | 301 | 91 | 2 | 1 | 301 | 1 | 297 | 4.34E-137 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380012590.01.T01 | Q8L7H1 | 35.945 | 217 | 122 | 7 | 20 | 227 | 7 | 215 | 2.26E-23 | 101 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380012590.01.T01 | A0A072VN11 | 68.439 | 301 | 91 | 2 | 1 | 301 | 1 | 297 | 2.07e-137 | 402 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380012590.01.T01 | MTR_1g090883 | 68.439 | 301 | 91 | 2 | 1 | 301 | 1 | 297 | 5.25e-141 | 402 |
MsG0380012590.01.T01 | MTR_4g056040 | 59.813 | 321 | 95 | 4 | 11 | 301 | 1 | 317 | 1.34e-117 | 348 |
MsG0380012590.01.T01 | MTR_1g038710 | 62.866 | 307 | 104 | 5 | 1 | 301 | 1 | 303 | 3.36e-115 | 340 |
MsG0380012590.01.T01 | MTR_4g056020 | 61.856 | 291 | 107 | 3 | 11 | 301 | 1 | 287 | 1.77e-113 | 335 |
MsG0380012590.01.T01 | MTR_4g056030 | 62.199 | 291 | 106 | 3 | 11 | 301 | 1 | 287 | 6.73e-113 | 334 |
MsG0380012590.01.T01 | MTR_1g090900 | 89.888 | 178 | 18 | 0 | 11 | 188 | 1 | 178 | 1.37e-112 | 324 |
MsG0380012590.01.T01 | MTR_4g056070 | 56.495 | 331 | 100 | 5 | 11 | 301 | 1 | 327 | 4.36e-108 | 321 |
MsG0380012590.01.T01 | MTR_4g055580 | 55.623 | 329 | 104 | 5 | 10 | 301 | 91 | 414 | 1.37e-107 | 325 |
MsG0380012590.01.T01 | MTR_4g055990 | 56.402 | 328 | 102 | 5 | 11 | 301 | 1 | 324 | 1.44e-104 | 314 |
MsG0380012590.01.T01 | MTR_4g055990 | 56.402 | 328 | 102 | 5 | 11 | 301 | 1 | 324 | 2.05e-104 | 314 |
MsG0380012590.01.T01 | MTR_4g093690 | 55.986 | 284 | 112 | 9 | 3 | 282 | 2 | 276 | 3.31e-86 | 259 |
MsG0380012590.01.T01 | MTR_7g110920 | 50.777 | 193 | 56 | 3 | 111 | 301 | 1 | 156 | 3.24e-47 | 161 |
MsG0380012590.01.T01 | MTR_4g056010 | 65.625 | 96 | 32 | 1 | 82 | 177 | 3 | 97 | 7.95e-33 | 117 |
MsG0380012590.01.T01 | MTR_7g007080 | 35.217 | 230 | 114 | 12 | 19 | 231 | 2 | 213 | 5.53e-20 | 89.7 |
MsG0380012590.01.T01 | MTR_5g084070 | 31.864 | 295 | 169 | 11 | 15 | 300 | 7 | 278 | 2.55e-18 | 85.1 |
MsG0380012590.01.T01 | MTR_5g080710 | 33.813 | 278 | 158 | 11 | 17 | 288 | 29 | 286 | 3.95e-18 | 84.7 |
MsG0380012590.01.T01 | MTR_1g041245 | 34.171 | 199 | 118 | 5 | 11 | 205 | 1 | 190 | 8.45e-18 | 83.2 |
MsG0380012590.01.T01 | MTR_7g033945 | 34.444 | 180 | 97 | 5 | 11 | 177 | 1 | 172 | 1.27e-17 | 79.3 |
MsG0380012590.01.T01 | MTR_2g005990 | 32.075 | 212 | 105 | 5 | 21 | 208 | 6 | 202 | 1.48e-17 | 82.4 |
MsG0380012590.01.T01 | MTR_8g445780 | 30.627 | 271 | 164 | 7 | 19 | 280 | 11 | 266 | 1.86e-17 | 82.4 |
MsG0380012590.01.T01 | MTR_2g007500 | 32.780 | 241 | 125 | 9 | 14 | 236 | 7 | 228 | 2.88e-17 | 81.3 |
MsG0380012590.01.T01 | MTR_6g022360 | 30.996 | 271 | 123 | 12 | 21 | 253 | 43 | 287 | 7.99e-17 | 80.5 |
MsG0380012590.01.T01 | MTR_7g034115 | 35.450 | 189 | 109 | 6 | 21 | 205 | 11 | 190 | 1.65e-16 | 79.3 |
MsG0380012590.01.T01 | MTR_8g014260 | 29.603 | 277 | 162 | 9 | 1 | 260 | 1 | 261 | 2.41e-16 | 79.3 |
MsG0380012590.01.T01 | MTR_7g032380 | 31.707 | 205 | 125 | 4 | 11 | 210 | 1 | 195 | 3.52e-16 | 78.2 |
MsG0380012590.01.T01 | MTR_7g098570 | 31.868 | 273 | 143 | 12 | 21 | 265 | 20 | 277 | 3.81e-16 | 79.0 |
MsG0380012590.01.T01 | MTR_1g053025 | 31.915 | 235 | 128 | 10 | 21 | 232 | 2 | 227 | 4.85e-16 | 78.2 |
MsG0380012590.01.T01 | MTR_7g056447 | 35.176 | 199 | 114 | 6 | 14 | 208 | 2 | 189 | 8.87e-16 | 76.6 |
MsG0380012590.01.T01 | MTR_8g085430 | 30.457 | 197 | 115 | 5 | 21 | 205 | 11 | 197 | 1.82e-15 | 75.9 |
MsG0380012590.01.T01 | MTR_6g011460 | 33.333 | 222 | 123 | 9 | 21 | 234 | 46 | 250 | 2.66e-15 | 76.3 |
MsG0380012590.01.T01 | MTR_8g467800 | 30.769 | 299 | 183 | 11 | 14 | 300 | 13 | 299 | 4.38e-15 | 75.1 |
MsG0380012590.01.T01 | MTR_3g107100 | 32.039 | 206 | 122 | 8 | 11 | 209 | 1 | 195 | 5.10e-15 | 75.1 |
MsG0380012590.01.T01 | MTR_8g467800 | 30.769 | 299 | 183 | 11 | 14 | 300 | 13 | 299 | 7.70e-15 | 74.7 |
MsG0380012590.01.T01 | MTR_4g039440 | 32.663 | 199 | 107 | 8 | 21 | 210 | 34 | 214 | 1.09e-14 | 74.3 |
MsG0380012590.01.T01 | MTR_7g055943 | 31.959 | 194 | 112 | 6 | 21 | 206 | 40 | 221 | 1.36e-14 | 73.9 |
MsG0380012590.01.T01 | MTR_8g468840 | 28.188 | 298 | 186 | 11 | 20 | 300 | 13 | 299 | 1.44e-14 | 73.9 |
MsG0380012590.01.T01 | MTR_3g023630 | 29.348 | 276 | 153 | 8 | 21 | 280 | 8 | 257 | 1.46e-14 | 73.6 |
MsG0380012590.01.T01 | MTR_5g073420 | 31.776 | 214 | 123 | 7 | 11 | 214 | 1 | 201 | 1.84e-14 | 73.6 |
MsG0380012590.01.T01 | MTR_4g080590 | 27.917 | 240 | 154 | 6 | 18 | 250 | 20 | 247 | 1.86e-14 | 73.6 |
MsG0380012590.01.T01 | MTR_4g080590 | 28.151 | 238 | 152 | 6 | 20 | 250 | 22 | 247 | 2.33e-14 | 73.6 |
MsG0380012590.01.T01 | MTR_8g062270 | 28.094 | 299 | 184 | 10 | 21 | 300 | 16 | 302 | 3.07e-14 | 73.2 |
MsG0380012590.01.T01 | MTR_3g108150 | 33.036 | 224 | 129 | 8 | 20 | 234 | 12 | 223 | 3.15e-14 | 72.8 |
MsG0380012590.01.T01 | MTR_7g033915 | 34.641 | 153 | 88 | 3 | 11 | 153 | 1 | 151 | 3.43e-14 | 72.4 |
MsG0380012590.01.T01 | MTR_4g032730 | 29.562 | 274 | 160 | 12 | 21 | 278 | 15 | 271 | 3.97e-14 | 72.8 |
MsG0380012590.01.T01 | MTR_7g115270 | 32.995 | 197 | 113 | 8 | 20 | 205 | 11 | 199 | 5.06e-14 | 72.4 |
MsG0380012590.01.T01 | MTR_7g098510 | 31.169 | 231 | 139 | 9 | 21 | 241 | 18 | 238 | 7.01e-14 | 71.6 |
MsG0380012590.01.T01 | MTR_6g044560 | 29.487 | 234 | 116 | 8 | 11 | 208 | 168 | 388 | 8.45e-14 | 72.0 |
MsG0380012590.01.T01 | MTR_1g085120 | 32.323 | 198 | 106 | 7 | 21 | 206 | 179 | 360 | 1.03e-13 | 71.6 |
MsG0380012590.01.T01 | MTR_1g085120 | 32.323 | 198 | 106 | 7 | 21 | 206 | 92 | 273 | 1.18e-13 | 71.2 |
MsG0380012590.01.T01 | MTR_1g085120 | 32.323 | 198 | 106 | 7 | 21 | 206 | 167 | 348 | 1.39e-13 | 71.2 |
MsG0380012590.01.T01 | MTR_3g087260 | 29.368 | 269 | 150 | 8 | 19 | 271 | 10 | 254 | 1.42e-13 | 71.2 |
MsG0380012590.01.T01 | MTR_3g108560 | 31.088 | 193 | 120 | 4 | 18 | 210 | 17 | 196 | 2.73e-13 | 69.7 |
MsG0380012590.01.T01 | MTR_3g108560 | 31.088 | 193 | 120 | 4 | 18 | 210 | 17 | 196 | 3.69e-13 | 69.7 |
MsG0380012590.01.T01 | MTR_6g022500 | 30.702 | 228 | 124 | 9 | 21 | 229 | 101 | 313 | 4.38e-13 | 69.7 |
MsG0380012590.01.T01 | MTR_6g044572 | 29.911 | 224 | 108 | 8 | 21 | 208 | 2 | 212 | 7.04e-13 | 68.9 |
MsG0380012590.01.T01 | MTR_2g007450 | 30.841 | 214 | 119 | 8 | 14 | 205 | 9 | 215 | 9.90e-13 | 68.6 |
MsG0380012590.01.T01 | MTR_7g098480 | 32.083 | 240 | 141 | 9 | 21 | 248 | 18 | 247 | 9.99e-13 | 68.6 |
MsG0380012590.01.T01 | MTR_8g468760 | 29.167 | 288 | 166 | 11 | 15 | 281 | 3 | 273 | 1.32e-12 | 68.2 |
MsG0380012590.01.T01 | MTR_7g007370 | 30.392 | 204 | 97 | 5 | 7 | 210 | 3 | 161 | 1.37e-12 | 67.8 |
MsG0380012590.01.T01 | MTR_7g056287 | 30.256 | 195 | 115 | 7 | 21 | 206 | 3 | 185 | 1.64e-12 | 67.8 |
MsG0380012590.01.T01 | MTR_7g056277 | 29.231 | 195 | 117 | 6 | 21 | 206 | 259 | 441 | 1.92e-12 | 67.8 |
MsG0380012590.01.T01 | MTR_8g070950 | 32.990 | 194 | 113 | 5 | 18 | 204 | 12 | 195 | 1.94e-12 | 67.8 |
MsG0380012590.01.T01 | MTR_7g060470 | 32.143 | 196 | 109 | 6 | 21 | 205 | 3 | 185 | 2.62e-12 | 67.0 |
MsG0380012590.01.T01 | MTR_1g107385 | 31.020 | 245 | 131 | 8 | 20 | 232 | 31 | 269 | 3.19e-12 | 67.0 |
MsG0380012590.01.T01 | MTR_0492s0020 | 31.651 | 218 | 126 | 8 | 20 | 229 | 85 | 287 | 6.80e-12 | 65.9 |
MsG0380012590.01.T01 | MTR_3g109982 | 33.000 | 200 | 119 | 6 | 16 | 212 | 8 | 195 | 7.03e-12 | 66.2 |
MsG0380012590.01.T01 | MTR_0543s0010 | 31.651 | 218 | 126 | 8 | 20 | 229 | 85 | 287 | 7.43e-12 | 65.9 |
MsG0380012590.01.T01 | MTR_3g110010 | 33.000 | 200 | 119 | 6 | 16 | 212 | 8 | 195 | 7.93e-12 | 66.2 |
MsG0380012590.01.T01 | MTR_8g014160 | 27.796 | 313 | 182 | 10 | 14 | 300 | 34 | 328 | 9.59e-12 | 65.5 |
MsG0380012590.01.T01 | MTR_1g013560 | 31.019 | 216 | 125 | 7 | 6 | 208 | 4 | 208 | 1.01e-11 | 65.1 |
MsG0380012590.01.T01 | MTR_7g033990 | 27.984 | 243 | 140 | 7 | 11 | 234 | 1 | 227 | 1.46e-11 | 65.1 |
MsG0380012590.01.T01 | MTR_7g007340 | 30.244 | 205 | 111 | 5 | 5 | 209 | 2 | 174 | 1.77e-11 | 64.7 |
MsG0380012590.01.T01 | MTR_5g058100 | 25.940 | 266 | 161 | 8 | 21 | 270 | 9 | 254 | 1.85e-11 | 64.7 |
MsG0380012590.01.T01 | MTR_5g005690 | 28.390 | 236 | 151 | 7 | 1 | 229 | 1 | 225 | 1.88e-11 | 64.7 |
MsG0380012590.01.T01 | MTR_1g013560 | 31.019 | 216 | 125 | 7 | 6 | 208 | 4 | 208 | 1.94e-11 | 64.7 |
MsG0380012590.01.T01 | MTR_2g007400 | 31.707 | 205 | 116 | 7 | 21 | 208 | 12 | 209 | 2.10e-11 | 64.3 |
MsG0380012590.01.T01 | MTR_4g050250 | 28.990 | 307 | 174 | 12 | 21 | 294 | 21 | 316 | 2.61e-11 | 64.3 |
MsG0380012590.01.T01 | MTR_5g058000 | 28.636 | 220 | 132 | 6 | 15 | 221 | 2 | 209 | 2.65e-11 | 63.9 |
MsG0380012590.01.T01 | MTR_8g062310 | 32.673 | 202 | 112 | 9 | 11 | 205 | 15 | 199 | 3.09e-11 | 63.9 |
MsG0380012590.01.T01 | MTR_7g110910 | 66.000 | 50 | 15 | 1 | 1 | 50 | 148 | 195 | 3.31e-11 | 62.0 |
MsG0380012590.01.T01 | MTR_7g034110 | 28.856 | 201 | 128 | 7 | 11 | 205 | 1 | 192 | 4.15e-11 | 63.2 |
MsG0380012590.01.T01 | MTR_7g056280 | 34.831 | 178 | 105 | 5 | 17 | 186 | 2 | 176 | 4.41e-11 | 63.9 |
MsG0380012590.01.T01 | MTR_5g083890 | 30.435 | 230 | 131 | 7 | 20 | 228 | 5 | 226 | 4.77e-11 | 63.5 |
MsG0380012590.01.T01 | MTR_2g047848 | 32.314 | 229 | 123 | 12 | 16 | 227 | 2 | 215 | 5.17e-11 | 63.2 |
MsG0380012590.01.T01 | MTR_7g032370 | 32.075 | 159 | 99 | 4 | 32 | 186 | 1 | 154 | 5.23e-11 | 63.2 |
MsG0380012590.01.T01 | MTR_7g033940 | 33.333 | 126 | 78 | 2 | 23 | 144 | 96 | 219 | 7.06e-11 | 61.2 |
MsG0380012590.01.T01 | MTR_8g469020 | 31.527 | 203 | 119 | 7 | 21 | 204 | 7 | 208 | 7.20e-11 | 62.8 |
MsG0380012590.01.T01 | MTR_3g014590 | 26.939 | 245 | 164 | 6 | 11 | 251 | 1 | 234 | 7.76e-11 | 62.8 |
MsG0380012590.01.T01 | MTR_4g098590 | 30.677 | 251 | 142 | 9 | 23 | 247 | 1 | 245 | 7.90e-11 | 62.8 |
MsG0380012590.01.T01 | MTR_5g058350 | 30.108 | 186 | 97 | 6 | 21 | 205 | 8 | 161 | 8.35e-11 | 60.5 |
MsG0380012590.01.T01 | MTR_1g115245 | 31.176 | 170 | 112 | 1 | 15 | 179 | 20 | 189 | 8.72e-11 | 62.0 |
MsG0380012590.01.T01 | MTR_6g040270 | 30.457 | 197 | 114 | 7 | 23 | 210 | 10 | 192 | 9.38e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380012590.01.T01 | AT4G14103 | 35.945 | 217 | 122 | 7 | 20 | 227 | 7 | 215 | 2.31e-24 | 101 |
MsG0380012590.01.T01 | AT4G14103 | 35.945 | 217 | 122 | 7 | 20 | 227 | 7 | 215 | 2.31e-24 | 101 |
MsG0380012590.01.T01 | AT4G14103 | 35.945 | 217 | 122 | 7 | 20 | 227 | 7 | 215 | 3.08e-24 | 102 |
MsG0380012590.01.T01 | AT4G00315 | 32.661 | 248 | 143 | 9 | 21 | 257 | 2 | 236 | 7.55e-23 | 98.2 |
MsG0380012590.01.T01 | AT4G26340 | 32.404 | 287 | 168 | 12 | 21 | 300 | 2 | 269 | 5.14e-22 | 95.5 |
MsG0380012590.01.T01 | AT1G55660 | 32.530 | 249 | 144 | 10 | 20 | 257 | 52 | 287 | 5.85e-22 | 94.7 |
MsG0380012590.01.T01 | AT1G55660 | 32.661 | 248 | 143 | 10 | 21 | 257 | 53 | 287 | 7.01e-22 | 95.9 |
MsG0380012590.01.T01 | AT4G10400 | 31.944 | 288 | 167 | 11 | 21 | 300 | 2 | 268 | 1.30e-21 | 94.4 |
MsG0380012590.01.T01 | AT4G10400 | 31.944 | 288 | 167 | 11 | 21 | 300 | 2 | 268 | 1.30e-21 | 94.4 |
MsG0380012590.01.T01 | AT4G10400 | 31.944 | 288 | 167 | 11 | 21 | 300 | 2 | 268 | 1.30e-21 | 94.4 |
MsG0380012590.01.T01 | AT5G56400 | 30.634 | 284 | 177 | 8 | 5 | 281 | 17 | 287 | 2.31e-21 | 94.0 |
MsG0380012590.01.T01 | AT2G26860 | 31.879 | 298 | 157 | 13 | 20 | 294 | 1 | 275 | 1.07e-20 | 91.7 |
MsG0380012590.01.T01 | AT2G26860 | 31.879 | 298 | 157 | 13 | 20 | 294 | 1 | 275 | 1.07e-20 | 91.7 |
MsG0380012590.01.T01 | AT5G60610 | 31.250 | 304 | 152 | 16 | 21 | 298 | 2 | 274 | 1.09e-20 | 91.7 |
MsG0380012590.01.T01 | AT5G60610 | 31.250 | 304 | 152 | 16 | 21 | 298 | 2 | 274 | 1.09e-20 | 91.7 |
MsG0380012590.01.T01 | AT3G59230 | 31.930 | 285 | 153 | 12 | 20 | 280 | 11 | 278 | 1.16e-20 | 92.0 |
MsG0380012590.01.T01 | AT3G59190 | 35.683 | 227 | 118 | 7 | 20 | 229 | 11 | 226 | 1.76e-20 | 90.9 |
MsG0380012590.01.T01 | AT5G56420 | 36.150 | 213 | 118 | 8 | 20 | 225 | 5 | 206 | 2.13e-20 | 90.9 |
MsG0380012590.01.T01 | AT5G56420 | 36.150 | 213 | 118 | 8 | 20 | 225 | 5 | 206 | 2.13e-20 | 90.9 |
MsG0380012590.01.T01 | AT5G56420 | 36.150 | 213 | 118 | 8 | 20 | 225 | 5 | 206 | 2.13e-20 | 90.9 |
MsG0380012590.01.T01 | AT3G59190 | 35.683 | 227 | 118 | 7 | 20 | 229 | 11 | 226 | 3.48e-20 | 90.9 |
MsG0380012590.01.T01 | AT4G09920 | 32.342 | 269 | 161 | 11 | 20 | 280 | 1 | 256 | 1.32e-19 | 87.0 |
MsG0380012590.01.T01 | AT4G09920 | 32.342 | 269 | 161 | 11 | 20 | 280 | 1 | 256 | 1.32e-19 | 87.0 |
MsG0380012590.01.T01 | AT4G09920 | 32.342 | 269 | 161 | 11 | 20 | 280 | 1 | 256 | 1.32e-19 | 87.0 |
MsG0380012590.01.T01 | AT4G09920 | 32.463 | 268 | 160 | 11 | 21 | 280 | 2 | 256 | 1.56e-19 | 87.4 |
MsG0380012590.01.T01 | AT4G09920 | 32.463 | 268 | 160 | 11 | 21 | 280 | 2 | 256 | 1.56e-19 | 87.4 |
MsG0380012590.01.T01 | AT5G56370 | 30.677 | 251 | 143 | 8 | 21 | 260 | 2 | 232 | 2.22e-19 | 87.0 |
MsG0380012590.01.T01 | AT2G42720 | 33.704 | 270 | 151 | 13 | 21 | 278 | 2 | 255 | 2.78e-19 | 87.8 |
MsG0380012590.01.T01 | AT5G56370 | 30.677 | 251 | 143 | 8 | 21 | 260 | 2 | 232 | 2.88e-19 | 87.8 |
MsG0380012590.01.T01 | AT5G56370 | 30.677 | 251 | 143 | 8 | 21 | 260 | 2 | 232 | 2.88e-19 | 87.8 |
MsG0380012590.01.T01 | AT5G56380 | 30.667 | 300 | 167 | 10 | 21 | 293 | 2 | 287 | 7.51e-19 | 86.7 |
MsG0380012590.01.T01 | AT5G56380 | 30.667 | 300 | 167 | 10 | 21 | 293 | 2 | 287 | 7.51e-19 | 86.7 |
MsG0380012590.01.T01 | AT1G51370 | 28.906 | 256 | 149 | 7 | 5 | 253 | 3 | 232 | 2.28e-18 | 84.7 |
MsG0380012590.01.T01 | AT2G04230 | 31.984 | 247 | 148 | 8 | 20 | 255 | 12 | 249 | 3.66e-18 | 84.7 |
MsG0380012590.01.T01 | AT4G14096 | 31.944 | 216 | 130 | 5 | 20 | 227 | 7 | 213 | 5.39e-18 | 84.3 |
MsG0380012590.01.T01 | AT4G14096 | 31.944 | 216 | 130 | 5 | 20 | 227 | 7 | 213 | 5.39e-18 | 84.3 |
MsG0380012590.01.T01 | AT1G51370 | 29.134 | 254 | 147 | 7 | 7 | 253 | 5 | 232 | 6.34e-18 | 84.0 |
MsG0380012590.01.T01 | AT1G51370 | 29.134 | 254 | 147 | 7 | 7 | 253 | 5 | 232 | 6.69e-18 | 84.0 |
MsG0380012590.01.T01 | AT4G00160 | 31.687 | 243 | 153 | 5 | 20 | 257 | 15 | 249 | 1.49e-17 | 82.8 |
MsG0380012590.01.T01 | AT3G59160 | 28.689 | 244 | 133 | 8 | 20 | 230 | 12 | 247 | 2.54e-17 | 82.4 |
MsG0380012590.01.T01 | AT5G41840 | 28.704 | 324 | 178 | 10 | 21 | 300 | 14 | 328 | 3.43e-17 | 82.0 |
MsG0380012590.01.T01 | AT3G58860 | 29.276 | 304 | 174 | 11 | 18 | 300 | 4 | 287 | 3.91e-17 | 81.6 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 6.25e-17 | 80.5 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 6.25e-17 | 80.5 |
MsG0380012590.01.T01 | AT3G50710 | 30.120 | 249 | 150 | 10 | 21 | 257 | 2 | 238 | 6.58e-17 | 80.9 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 9.52e-17 | 80.1 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 9.52e-17 | 80.1 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 9.52e-17 | 80.1 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 4 | 256 | 9.52e-17 | 80.1 |
MsG0380012590.01.T01 | AT2G29910 | 30.075 | 266 | 168 | 9 | 20 | 280 | 28 | 280 | 1.21e-16 | 79.7 |
MsG0380012590.01.T01 | AT3G59200 | 31.136 | 273 | 155 | 11 | 20 | 276 | 6 | 261 | 1.46e-16 | 79.7 |
MsG0380012590.01.T01 | AT5G56440 | 31.752 | 274 | 164 | 12 | 21 | 285 | 2 | 261 | 3.33e-16 | 79.0 |
MsG0380012590.01.T01 | AT3G26922 | 29.876 | 241 | 152 | 8 | 20 | 255 | 13 | 241 | 4.04e-16 | 77.8 |
MsG0380012590.01.T01 | AT3G26922 | 29.876 | 241 | 152 | 8 | 20 | 255 | 13 | 241 | 4.04e-16 | 77.8 |
MsG0380012590.01.T01 | AT3G59200 | 31.136 | 273 | 155 | 11 | 20 | 276 | 6 | 261 | 4.12e-16 | 79.0 |
MsG0380012590.01.T01 | AT4G00320 | 27.900 | 319 | 182 | 10 | 17 | 299 | 9 | 315 | 5.48e-16 | 78.6 |
MsG0380012590.01.T01 | AT3G59210 | 29.487 | 312 | 182 | 9 | 17 | 301 | 3 | 303 | 6.77e-16 | 78.2 |
MsG0380012590.01.T01 | AT3G59210 | 29.487 | 312 | 182 | 9 | 17 | 301 | 3 | 303 | 6.77e-16 | 78.2 |
MsG0380012590.01.T01 | AT3G59210 | 29.487 | 312 | 182 | 9 | 17 | 301 | 3 | 303 | 6.77e-16 | 78.2 |
MsG0380012590.01.T01 | AT3G59210 | 29.487 | 312 | 182 | 9 | 17 | 301 | 3 | 303 | 6.77e-16 | 78.2 |
MsG0380012590.01.T01 | AT3G59210 | 29.487 | 312 | 182 | 9 | 17 | 301 | 3 | 303 | 6.77e-16 | 78.2 |
MsG0380012590.01.T01 | AT5G38590 | 31.452 | 248 | 142 | 10 | 20 | 257 | 1 | 230 | 7.46e-16 | 76.6 |
MsG0380012590.01.T01 | AT5G41830 | 27.812 | 320 | 183 | 10 | 17 | 300 | 9 | 316 | 8.82e-16 | 77.8 |
MsG0380012590.01.T01 | AT3G42770 | 31.229 | 301 | 162 | 14 | 26 | 301 | 4 | 284 | 1.03e-15 | 77.8 |
MsG0380012590.01.T01 | AT3G03030 | 37.762 | 143 | 78 | 3 | 21 | 153 | 2 | 143 | 1.14e-15 | 76.6 |
MsG0380012590.01.T01 | AT5G44950 | 28.369 | 282 | 167 | 12 | 20 | 287 | 3 | 263 | 1.14e-15 | 77.4 |
MsG0380012590.01.T01 | AT3G03030 | 37.762 | 143 | 78 | 3 | 21 | 153 | 2 | 143 | 1.41e-15 | 77.0 |
MsG0380012590.01.T01 | AT3G44060 | 31.343 | 268 | 148 | 13 | 26 | 278 | 4 | 250 | 1.51e-15 | 77.0 |
MsG0380012590.01.T01 | AT5G38590 | 31.687 | 243 | 146 | 9 | 21 | 257 | 2 | 230 | 1.70e-15 | 76.6 |
MsG0380012590.01.T01 | AT3G03040 | 28.254 | 315 | 176 | 11 | 21 | 300 | 2 | 301 | 1.98e-15 | 76.6 |
MsG0380012590.01.T01 | AT2G42730 | 29.603 | 277 | 162 | 11 | 20 | 280 | 4 | 263 | 2.29e-15 | 76.6 |
MsG0380012590.01.T01 | AT5G56810 | 28.968 | 252 | 146 | 7 | 21 | 257 | 15 | 248 | 2.54e-15 | 75.5 |
MsG0380012590.01.T01 | AT5G38392 | 34.951 | 206 | 109 | 5 | 21 | 210 | 2 | 198 | 2.92e-15 | 73.9 |
MsG0380012590.01.T01 | AT5G56810 | 28.968 | 252 | 146 | 7 | 21 | 257 | 15 | 248 | 3.29e-15 | 75.9 |
MsG0380012590.01.T01 | AT1G58310 | 29.210 | 291 | 161 | 9 | 20 | 280 | 7 | 282 | 4.89e-15 | 75.5 |
MsG0380012590.01.T01 | AT3G59170 | 30.769 | 247 | 126 | 9 | 20 | 230 | 6 | 243 | 5.23e-15 | 75.5 |
MsG0380012590.01.T01 | AT3G49030 | 29.719 | 249 | 148 | 10 | 19 | 256 | 19 | 251 | 8.31e-15 | 74.7 |
MsG0380012590.01.T01 | AT3G49030 | 29.719 | 249 | 148 | 10 | 19 | 256 | 19 | 251 | 1.03e-14 | 74.7 |
MsG0380012590.01.T01 | AT3G44810 | 28.625 | 269 | 169 | 8 | 23 | 278 | 9 | 267 | 1.11e-14 | 74.3 |
MsG0380012590.01.T01 | AT4G15060 | 30.120 | 249 | 153 | 9 | 18 | 257 | 23 | 259 | 1.58e-14 | 73.9 |
MsG0380012590.01.T01 | AT3G59250 | 29.749 | 279 | 157 | 8 | 20 | 295 | 6 | 248 | 1.64e-14 | 73.9 |
MsG0380012590.01.T01 | AT4G13960 | 34.343 | 198 | 109 | 6 | 21 | 208 | 2 | 188 | 1.68e-14 | 73.9 |
MsG0380012590.01.T01 | AT4G13960 | 34.343 | 198 | 109 | 6 | 21 | 208 | 2 | 188 | 1.68e-14 | 73.9 |
MsG0380012590.01.T01 | AT4G22280 | 29.720 | 286 | 181 | 8 | 20 | 300 | 1 | 271 | 2.02e-14 | 73.6 |
MsG0380012590.01.T01 | AT4G22280 | 29.720 | 286 | 181 | 8 | 20 | 300 | 1 | 271 | 2.22e-14 | 72.8 |
MsG0380012590.01.T01 | AT3G49150 | 28.061 | 196 | 129 | 3 | 19 | 208 | 14 | 203 | 2.74e-14 | 73.2 |
MsG0380012590.01.T01 | AT3G58900 | 29.286 | 280 | 158 | 10 | 21 | 280 | 2 | 261 | 3.14e-14 | 72.4 |
MsG0380012590.01.T01 | AT2G26030 | 29.762 | 252 | 146 | 10 | 21 | 257 | 4 | 239 | 3.47e-14 | 72.8 |
MsG0380012590.01.T01 | AT2G26030 | 29.762 | 252 | 146 | 10 | 21 | 257 | 4 | 239 | 3.47e-14 | 72.8 |
MsG0380012590.01.T01 | AT2G26030 | 29.762 | 252 | 146 | 10 | 21 | 257 | 4 | 239 | 3.51e-14 | 72.8 |
MsG0380012590.01.T01 | AT5G44490 | 29.694 | 229 | 126 | 8 | 1 | 213 | 1 | 210 | 4.00e-14 | 72.8 |
MsG0380012590.01.T01 | AT5G44490 | 29.694 | 229 | 126 | 8 | 1 | 213 | 1 | 210 | 4.30e-14 | 72.8 |
MsG0380012590.01.T01 | AT3G58900 | 29.286 | 280 | 158 | 10 | 21 | 280 | 2 | 261 | 5.18e-14 | 71.6 |
MsG0380012590.01.T01 | AT3G58900 | 29.286 | 280 | 158 | 10 | 21 | 280 | 2 | 261 | 5.18e-14 | 71.6 |
MsG0380012590.01.T01 | AT3G58900 | 29.286 | 280 | 158 | 10 | 21 | 280 | 2 | 261 | 6.40e-14 | 72.4 |
MsG0380012590.01.T01 | AT1G66310 | 30.000 | 270 | 151 | 11 | 1 | 255 | 1 | 247 | 6.89e-14 | 72.0 |
MsG0380012590.01.T01 | AT3G59150 | 32.735 | 223 | 122 | 10 | 3 | 213 | 2 | 208 | 8.44e-14 | 72.0 |
MsG0380012590.01.T01 | AT4G15060 | 29.839 | 248 | 153 | 9 | 19 | 257 | 170 | 405 | 8.63e-14 | 72.0 |
MsG0380012590.01.T01 | AT5G56690 | 29.044 | 272 | 170 | 8 | 23 | 283 | 4 | 263 | 1.31e-13 | 71.2 |
MsG0380012590.01.T01 | AT4G26350 | 29.381 | 194 | 119 | 4 | 21 | 208 | 2 | 183 | 1.52e-13 | 70.9 |
MsG0380012590.01.T01 | AT5G53840 | 31.169 | 231 | 134 | 8 | 9 | 229 | 3 | 218 | 1.83e-13 | 70.9 |
MsG0380012590.01.T01 | AT5G53635 | 30.435 | 299 | 167 | 14 | 23 | 299 | 2 | 281 | 2.45e-13 | 70.5 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 3.49e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 4.93e-13 | 69.7 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.04e-13 | 68.9 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.04e-13 | 68.9 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 6 | 184 | 5.21e-13 | 69.3 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 6 | 184 | 5.21e-13 | 69.3 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 6 | 184 | 5.21e-13 | 69.3 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 6 | 184 | 5.21e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.60e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.60e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.60e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 11 | 292 | 5.60e-13 | 69.3 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 43 | 221 | 5.61e-13 | 69.3 |
MsG0380012590.01.T01 | AT3G52680 | 29.553 | 291 | 184 | 8 | 20 | 300 | 20 | 299 | 5.99e-13 | 69.3 |
MsG0380012590.01.T01 | AT5G22700 | 31.937 | 191 | 115 | 5 | 21 | 208 | 43 | 221 | 6.53e-13 | 69.3 |
MsG0380012590.01.T01 | AT1G06630 | 29.043 | 303 | 172 | 13 | 20 | 300 | 20 | 301 | 7.23e-13 | 68.9 |
MsG0380012590.01.T01 | AT1G78760 | 26.568 | 271 | 174 | 8 | 19 | 280 | 14 | 268 | 8.68e-13 | 68.9 |
MsG0380012590.01.T01 | AT3G52680 | 29.210 | 291 | 185 | 8 | 20 | 300 | 20 | 299 | 8.90e-13 | 68.6 |
MsG0380012590.01.T01 | AT3G58920 | 29.032 | 279 | 170 | 9 | 21 | 280 | 2 | 271 | 9.99e-13 | 68.6 |
MsG0380012590.01.T01 | AT3G49040 | 29.032 | 248 | 150 | 9 | 18 | 255 | 14 | 245 | 1.61e-12 | 67.4 |
MsG0380012590.01.T01 | AT3G51530 | 29.568 | 301 | 181 | 12 | 1 | 292 | 14 | 292 | 1.98e-12 | 67.8 |
MsG0380012590.01.T01 | AT5G56410 | 31.197 | 234 | 117 | 12 | 21 | 224 | 2 | 221 | 2.53e-12 | 67.4 |
MsG0380012590.01.T01 | AT5G22670 | 26.667 | 255 | 167 | 7 | 11 | 257 | 1 | 243 | 3.15e-12 | 67.0 |
MsG0380012590.01.T01 | AT1G13780 | 28.179 | 291 | 172 | 12 | 21 | 290 | 10 | 284 | 3.37e-12 | 66.6 |
MsG0380012590.01.T01 | AT1G66300 | 28.261 | 230 | 135 | 8 | 1 | 213 | 1 | 217 | 3.38e-12 | 67.0 |
MsG0380012590.01.T01 | AT1G13780 | 28.179 | 291 | 172 | 12 | 21 | 290 | 10 | 284 | 3.99e-12 | 66.6 |
MsG0380012590.01.T01 | AT3G58980 | 28.727 | 275 | 174 | 10 | 21 | 285 | 2 | 264 | 4.08e-12 | 67.0 |
MsG0380012590.01.T01 | AT3G58960 | 27.244 | 312 | 178 | 14 | 21 | 301 | 2 | 295 | 4.54e-12 | 66.6 |
MsG0380012590.01.T01 | AT5G50270 | 29.876 | 241 | 155 | 7 | 21 | 255 | 2 | 234 | 9.96e-12 | 65.1 |
MsG0380012590.01.T01 | AT5G38396 | 29.787 | 282 | 159 | 10 | 21 | 281 | 2 | 265 | 1.29e-11 | 65.5 |
MsG0380012590.01.T01 | AT2G29930 | 29.195 | 298 | 179 | 14 | 20 | 301 | 11 | 292 | 1.60e-11 | 65.1 |
MsG0380012590.01.T01 | AT2G29930 | 29.195 | 298 | 179 | 14 | 20 | 301 | 11 | 292 | 1.60e-11 | 65.1 |
MsG0380012590.01.T01 | AT5G18780 | 31.138 | 167 | 106 | 4 | 20 | 183 | 10 | 170 | 1.63e-11 | 64.7 |
MsG0380012590.01.T01 | AT5G18780 | 31.138 | 167 | 106 | 4 | 20 | 183 | 10 | 170 | 1.63e-11 | 64.7 |
MsG0380012590.01.T01 | AT5G50270 | 29.876 | 241 | 155 | 7 | 21 | 255 | 2 | 234 | 1.89e-11 | 64.7 |
MsG0380012590.01.T01 | AT3G58930 | 27.758 | 281 | 169 | 9 | 21 | 280 | 2 | 269 | 2.30e-11 | 64.7 |
MsG0380012590.01.T01 | AT3G58930 | 27.758 | 281 | 169 | 9 | 21 | 280 | 2 | 269 | 2.30e-11 | 64.7 |
MsG0380012590.01.T01 | AT3G58930 | 27.758 | 281 | 169 | 9 | 21 | 280 | 2 | 269 | 2.30e-11 | 64.7 |
MsG0380012590.01.T01 | AT5G18780 | 31.138 | 167 | 106 | 4 | 20 | 183 | 10 | 170 | 2.97e-11 | 64.3 |
MsG0380012590.01.T01 | AT5G18780 | 31.138 | 167 | 106 | 4 | 20 | 183 | 10 | 170 | 2.97e-11 | 64.3 |
MsG0380012590.01.T01 | AT3G59240 | 26.910 | 301 | 189 | 9 | 20 | 300 | 7 | 296 | 3.67e-11 | 63.9 |
MsG0380012590.01.T01 | AT1G16930 | 25.000 | 252 | 164 | 6 | 15 | 257 | 9 | 244 | 4.23e-11 | 63.5 |
MsG0380012590.01.T01 | AT1G16930 | 25.000 | 252 | 164 | 6 | 15 | 257 | 9 | 244 | 4.23e-11 | 63.5 |
MsG0380012590.01.T01 | AT1G16930 | 25.000 | 252 | 164 | 6 | 15 | 257 | 9 | 244 | 4.23e-11 | 63.5 |
MsG0380012590.01.T01 | AT3G59000 | 30.137 | 219 | 121 | 9 | 21 | 209 | 2 | 218 | 4.30e-11 | 63.2 |
MsG0380012590.01.T01 | AT5G22660 | 26.471 | 272 | 176 | 9 | 20 | 281 | 12 | 269 | 4.43e-11 | 63.2 |
MsG0380012590.01.T01 | AT3G58880 | 29.279 | 222 | 134 | 6 | 21 | 229 | 3 | 214 | 4.63e-11 | 63.5 |
MsG0380012590.01.T01 | AT3G26930 | 29.831 | 295 | 182 | 11 | 12 | 300 | 12 | 287 | 5.51e-11 | 63.5 |
MsG0380012590.01.T01 | AT5G22660 | 27.861 | 201 | 134 | 5 | 20 | 219 | 12 | 202 | 8.64e-11 | 62.8 |
MsG0380012590.01.T01 | AT5G38590 | 30.909 | 165 | 107 | 5 | 21 | 180 | 2 | 164 | 8.95e-11 | 62.0 |
Find 55 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATTGCTTTGGACGAAAT+AGG | 0.255211 | 3:-20369696 | None:intergenic |
CAAGGTTGAGGAACTTGAAT+TGG | 0.292646 | 3:+20369836 | MsG0380012590.01.T01:CDS |
TGTTTATTTATGCCTGTTGC+TGG | 0.329287 | 3:+20370167 | MsG0380012590.01.T01:CDS |
GGATTGCTTTGGACGAAATA+GGG | 0.347836 | 3:-20369695 | None:intergenic |
TCTTCGCATTTCTAAGCATC+TGG | 0.358395 | 3:+20370310 | MsG0380012590.01.T01:CDS |
GATAATTCAAAGTCAAGGTT+CGG | 0.364707 | 3:-20369660 | None:intergenic |
TCAGAAGAAGAATTAATTCC+TGG | 0.365045 | 3:-20369951 | None:intergenic |
GCTCGTGGTCTTGAAATTGC+GGG | 0.367607 | 3:+20369917 | MsG0380012590.01.T01:CDS |
AAAGTCAAGGTTCGGGATCT+TGG | 0.367911 | 3:-20369652 | None:intergenic |
AACCAATCTTATTGCCCTTT+AGG | 0.384324 | 3:+20369877 | MsG0380012590.01.T01:CDS |
ATATACAGATTGGATTGCTT+TGG | 0.388000 | 3:-20369706 | None:intergenic |
ACCCACAAGTGCATATCATA+TGG | 0.391836 | 3:-20369795 | None:intergenic |
AGCCTAAAGGGCAATAAGAT+TGG | 0.392082 | 3:-20369879 | None:intergenic |
ATAATTCAAAGTCAAGGTTC+GGG | 0.396163 | 3:-20369659 | None:intergenic |
CCCATATGATATGCACTTGT+GGG | 0.415753 | 3:+20369794 | MsG0380012590.01.T01:CDS |
AGGAACTTGAATTGGATTGT+AGG | 0.418034 | 3:+20369844 | MsG0380012590.01.T01:CDS |
AAGAGTGGCTCGATCAAGAT+TGG | 0.444407 | 3:-20370291 | None:intergenic |
TTGTAGATAGAACACTTGTT+TGG | 0.449162 | 3:-20369611 | None:intergenic |
GACCACGAGCGACTTAGAAA+TGG | 0.449696 | 3:-20369904 | None:intergenic |
ATCCTGCTCTTCATCAGATT+CGG | 0.451545 | 3:-20369520 | None:intergenic |
GGAGAGCTGCATATACAGAT+TGG | 0.456055 | 3:-20369716 | None:intergenic |
AATTTGCAGTGGACACACTT+TGG | 0.462341 | 3:-20370192 | None:intergenic |
CACACTTTGGAACCAGCAAC+AGG | 0.468311 | 3:-20370179 | None:intergenic |
CTTAGAAATGGAAAGCCTAA+AGG | 0.485386 | 3:-20369892 | None:intergenic |
TTAGAAATGGAAAGCCTAAA+GGG | 0.487373 | 3:-20369891 | None:intergenic |
TAGAATTGAACACAATAAGT+TGG | 0.489735 | 3:-20370007 | None:intergenic |
CGCTCGTGGTCTTGAAATTG+CGG | 0.490023 | 3:+20369916 | MsG0380012590.01.T01:CDS |
CAAGTGTTCTATCTACAAGA+TGG | 0.503005 | 3:+20369616 | MsG0380012590.01.T01:CDS |
TTGCGGGGCGGAACTATGCC+AGG | 0.505023 | 3:+20369933 | MsG0380012590.01.T01:CDS |
CTCCGAATCTGATGAAGAGC+AGG | 0.514545 | 3:+20369518 | MsG0380012590.01.T01:CDS |
AATGAACACTCTCTTTAATG+AGG | 0.516242 | 3:-20370144 | None:intergenic |
CCCACAAGTGCATATCATAT+GGG | 0.516903 | 3:-20369794 | None:intergenic |
ATCTCGTTGTCCACATCTTG+AGG | 0.524833 | 3:+20370070 | MsG0380012590.01.T01:CDS |
AGCATTAGACCTCAAGGTTG+AGG | 0.528928 | 3:+20369824 | MsG0380012590.01.T01:CDS |
TTCAAAAGCATTAGACCTCA+AGG | 0.530430 | 3:+20369818 | MsG0380012590.01.T01:CDS |
TATGAAGAACTTCAAGTGAC+GGG | 0.538915 | 3:-20370220 | None:intergenic |
CCCCATATGATATGCACTTG+TGG | 0.550566 | 3:+20369793 | MsG0380012590.01.T01:CDS |
TTCCATTTCTAAGTCGCTCG+TGG | 0.557905 | 3:+20369902 | MsG0380012590.01.T01:CDS |
CTAAGTCTCTATAGTGACAA+TGG | 0.561315 | 3:+20369765 | MsG0380012590.01.T01:CDS |
AGTTTGTATTCACTCTTGAG+AGG | 0.563248 | 3:+20370341 | MsG0380012590.01.T01:CDS |
AAGTGTTCTATCTACAAGAT+GGG | 0.565572 | 3:+20369617 | MsG0380012590.01.T01:CDS |
GACGGGGCATTAATTTGCAG+TGG | 0.587492 | 3:-20370203 | None:intergenic |
AAAACAAATTCCTCAAGATG+TGG | 0.591033 | 3:-20370080 | None:intergenic |
TCTTTGATAATTCAAAGTCA+AGG | 0.592329 | 3:-20369665 | None:intergenic |
ATGAACACTCTCTTTAATGA+GGG | 0.595651 | 3:-20370143 | None:intergenic |
ATTCAAGTTCCTCAACCTTG+AGG | 0.595725 | 3:-20369833 | None:intergenic |
CAATAAGATTGGTTTCTCGA+TGG | 0.596958 | 3:-20369868 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.601943 | 3:-20369984 | None:intergenic |
ATATGAAGAACTTCAAGTGA+CGG | 0.613196 | 3:-20370221 | None:intergenic |
CTCGTGGTCTTGAAATTGCG+GGG | 0.626254 | 3:+20369918 | MsG0380012590.01.T01:CDS |
ATGCTTAGAAATGCGAAGAG+TGG | 0.630789 | 3:-20370306 | None:intergenic |
TATTGTGTTCAATTCTATCG+CGG | 0.635341 | 3:+20370013 | MsG0380012590.01.T01:CDS |
CCACAAGTGCATATCATATG+GGG | 0.653247 | 3:-20369793 | None:intergenic |
ATGAAGAACTTCAAGTGACG+GGG | 0.714715 | 3:-20370219 | None:intergenic |
GTGGTCTTGAAATTGCGGGG+CGG | 0.723470 | 3:+20369921 | MsG0380012590.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTGTTAATTCATATTTTCT+TGG | - | Chr3:20370266-20370285 | None:intergenic | 15.0% |
! | TAGAATTGAACACAATAAGT+TGG | - | Chr3:20370010-20370029 | None:intergenic | 25.0% |
!! | TCTTTGATAATTCAAAGTCA+AGG | - | Chr3:20369668-20369687 | None:intergenic | 25.0% |
AAAACAAATTCCTCAAGATG+TGG | - | Chr3:20370083-20370102 | None:intergenic | 30.0% | |
AAGTGTTCTATCTACAAGAT+GGG | + | Chr3:20369617-20369636 | MsG0380012590.01.T01:CDS | 30.0% | |
AATGAACACTCTCTTTAATG+AGG | - | Chr3:20370147-20370166 | None:intergenic | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | Chr3:20369987-20370006 | None:intergenic | 30.0% | |
ATAATTCAAAGTCAAGGTTC+GGG | - | Chr3:20369662-20369681 | None:intergenic | 30.0% | |
ATATACAGATTGGATTGCTT+TGG | - | Chr3:20369709-20369728 | None:intergenic | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | Chr3:20370224-20370243 | None:intergenic | 30.0% | |
ATGAACACTCTCTTTAATGA+GGG | - | Chr3:20370146-20370165 | None:intergenic | 30.0% | |
CAACAAGAAACCAAAAACAA+TGG | + | Chr3:20369491-20369510 | MsG0380012590.01.T01:CDS | 30.0% | |
GATAATTCAAAGTCAAGGTT+CGG | - | Chr3:20369663-20369682 | None:intergenic | 30.0% | |
TATTGTGTTCAATTCTATCG+CGG | + | Chr3:20370013-20370032 | MsG0380012590.01.T01:CDS | 30.0% | |
TCAGAAGAAGAATTAATTCC+TGG | - | Chr3:20369954-20369973 | None:intergenic | 30.0% | |
TTAGAAATGGAAAGCCTAAA+GGG | - | Chr3:20369894-20369913 | None:intergenic | 30.0% | |
TTGTAGATAGAACACTTGTT+TGG | - | Chr3:20369614-20369633 | None:intergenic | 30.0% | |
!!! | TTAAGTTTTTAGTGCGTCTT+AGG | - | Chr3:20369740-20369759 | None:intergenic | 30.0% |
AACCAATCTTATTGCCCTTT+AGG | + | Chr3:20369877-20369896 | MsG0380012590.01.T01:CDS | 35.0% | |
AGGAACTTGAATTGGATTGT+AGG | + | Chr3:20369844-20369863 | MsG0380012590.01.T01:CDS | 35.0% | |
AGTTTGTATTCACTCTTGAG+AGG | + | Chr3:20370341-20370360 | MsG0380012590.01.T01:CDS | 35.0% | |
CAAGTGTTCTATCTACAAGA+TGG | + | Chr3:20369616-20369635 | MsG0380012590.01.T01:CDS | 35.0% | |
CTAAGTCTCTATAGTGACAA+TGG | + | Chr3:20369765-20369784 | MsG0380012590.01.T01:CDS | 35.0% | |
CTTAGAAATGGAAAGCCTAA+AGG | - | Chr3:20369895-20369914 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | Chr3:20370223-20370242 | None:intergenic | 35.0% | |
TGTTTATTTATGCCTGTTGC+TGG | + | Chr3:20370167-20370186 | MsG0380012590.01.T01:CDS | 35.0% | |
!! | CAATAAGATTGGTTTCTCGA+TGG | - | Chr3:20369871-20369890 | None:intergenic | 35.0% |
!! | TTCAAAAGCATTAGACCTCA+AGG | + | Chr3:20369818-20369837 | MsG0380012590.01.T01:CDS | 35.0% |
!!! | GGTAAGACTCTTTTGTTGTT+AGG | - | Chr3:20369593-20369612 | None:intergenic | 35.0% |
AATTTGCAGTGGACACACTT+TGG | - | Chr3:20370195-20370214 | None:intergenic | 40.0% | |
ACCCACAAGTGCATATCATA+TGG | - | Chr3:20369798-20369817 | None:intergenic | 40.0% | |
AGCCTAAAGGGCAATAAGAT+TGG | - | Chr3:20369882-20369901 | None:intergenic | 40.0% | |
ATCCTGCTCTTCATCAGATT+CGG | - | Chr3:20369523-20369542 | None:intergenic | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | Chr3:20370222-20370241 | None:intergenic | 40.0% | |
ATGCTTAGAAATGCGAAGAG+TGG | - | Chr3:20370309-20370328 | None:intergenic | 40.0% | |
CAAGGTTGAGGAACTTGAAT+TGG | + | Chr3:20369836-20369855 | MsG0380012590.01.T01:CDS | 40.0% | |
CCACAAGTGCATATCATATG+GGG | - | Chr3:20369796-20369815 | None:intergenic | 40.0% | |
CCCACAAGTGCATATCATAT+GGG | - | Chr3:20369797-20369816 | None:intergenic | 40.0% | |
CCCATATGATATGCACTTGT+GGG | + | Chr3:20369794-20369813 | MsG0380012590.01.T01:CDS | 40.0% | |
TCTTCGCATTTCTAAGCATC+TGG | + | Chr3:20370310-20370329 | MsG0380012590.01.T01:CDS | 40.0% | |
! | ATTCAAGTTCCTCAACCTTG+AGG | - | Chr3:20369836-20369855 | None:intergenic | 40.0% |
! | GGATTGCTTTGGACGAAATA+GGG | - | Chr3:20369698-20369717 | None:intergenic | 40.0% |
! | TGGATTGCTTTGGACGAAAT+AGG | - | Chr3:20369699-20369718 | None:intergenic | 40.0% |
AAAGTCAAGGTTCGGGATCT+TGG | - | Chr3:20369655-20369674 | None:intergenic | 45.0% | |
AAGAGTGGCTCGATCAAGAT+TGG | - | Chr3:20370294-20370313 | None:intergenic | 45.0% | |
AGCATTAGACCTCAAGGTTG+AGG | + | Chr3:20369824-20369843 | MsG0380012590.01.T01:CDS | 45.0% | |
ATCTCGTTGTCCACATCTTG+AGG | + | Chr3:20370070-20370089 | MsG0380012590.01.T01:CDS | 45.0% | |
CCCCATATGATATGCACTTG+TGG | + | Chr3:20369793-20369812 | MsG0380012590.01.T01:CDS | 45.0% | |
GGAGAGCTGCATATACAGAT+TGG | - | Chr3:20369719-20369738 | None:intergenic | 45.0% | |
TTCCATTTCTAAGTCGCTCG+TGG | + | Chr3:20369902-20369921 | MsG0380012590.01.T01:CDS | 45.0% | |
CTCCGAATCTGATGAAGAGC+AGG | + | Chr3:20369518-20369537 | MsG0380012590.01.T01:CDS | 50.0% | |
GACCACGAGCGACTTAGAAA+TGG | - | Chr3:20369907-20369926 | None:intergenic | 50.0% | |
! | CGCTCGTGGTCTTGAAATTG+CGG | + | Chr3:20369916-20369935 | MsG0380012590.01.T01:CDS | 50.0% |
! | CTCGTGGTCTTGAAATTGCG+GGG | + | Chr3:20369918-20369937 | MsG0380012590.01.T01:CDS | 50.0% |
! | GCTCGTGGTCTTGAAATTGC+GGG | + | Chr3:20369917-20369936 | MsG0380012590.01.T01:CDS | 50.0% |
! | TCGGAGCACGCCATTGTTTT+TGG | - | Chr3:20369504-20369523 | None:intergenic | 50.0% |
!! | CACACTTTGGAACCAGCAAC+AGG | - | Chr3:20370182-20370201 | None:intergenic | 50.0% |
!! | GACGGGGCATTAATTTGCAG+TGG | - | Chr3:20370206-20370225 | None:intergenic | 50.0% |
! | GTGGTCTTGAAATTGCGGGG+CGG | + | Chr3:20369921-20369940 | MsG0380012590.01.T01:CDS | 55.0% |
TTGCGGGGCGGAACTATGCC+AGG | + | Chr3:20369933-20369952 | MsG0380012590.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 20369480 | 20370385 | 20369480 | ID=MsG0380012590.01;Name=MsG0380012590.01 |
Chr3 | mRNA | 20369480 | 20370385 | 20369480 | ID=MsG0380012590.01.T01;Parent=MsG0380012590.01;Name=MsG0380012590.01.T01;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|301 |
Chr3 | exon | 20369480 | 20370385 | 20369480 | ID=MsG0380012590.01.T01:exon:3703;Parent=MsG0380012590.01.T01 |
Chr3 | CDS | 20369480 | 20370385 | 20369480 | ID=MsG0380012590.01.T01:cds;Parent=MsG0380012590.01.T01 |
Gene Sequence |
Protein sequence |