AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024321.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024321.01.T01 MTR_5g008920 68.351 376 112 5 22 393 12 384 5.26e-175 493
MsG0580024321.01.T01 MTR_5g008950 60.317 378 138 7 24 396 1 371 1.51e-154 441
MsG0580024321.01.T01 MTR_7g056433 38.205 390 218 8 17 390 7 389 3.11e-75 239
MsG0580024321.01.T01 MTR_1g041245 39.637 386 202 11 24 390 13 386 5.88e-74 236
MsG0580024321.01.T01 MTR_7g032370 37.867 375 185 12 37 390 5 352 3.79e-63 207
MsG0580024321.01.T01 MTR_7g032380 37.433 374 191 11 27 390 16 356 4.97e-62 204
MsG0580024321.01.T01 MTR_7g098510 36.049 405 230 12 1 390 1 391 4.41e-61 202
MsG0580024321.01.T01 MTR_7g115270 36.709 395 210 12 24 387 14 399 1.24e-59 199
MsG0580024321.01.T01 MTR_7g033915 36.719 384 193 15 24 389 13 364 1.51e-59 197
MsG0580024321.01.T01 MTR_0543s0010 35.389 373 223 9 24 389 88 449 9.17e-59 198
MsG0580024321.01.T01 MTR_7g034115 38.933 375 201 12 24 382 13 375 3.87e-56 189
MsG0580024321.01.T01 MTR_7g088260 33.990 406 239 11 2 390 69 462 4.49e-56 191
MsG0580024321.01.T01 MTR_3g108560 34.896 384 223 10 20 389 18 388 5.15e-55 186
MsG0580024321.01.T01 MTR_7g033990 35.219 389 218 16 12 382 3 375 5.47e-55 187
MsG0580024321.01.T01 MTR_0492s0020 35.057 348 210 8 24 366 88 424 3.34e-54 186
MsG0580024321.01.T01 MTR_7g098480 33.666 401 241 11 1 389 1 388 2.09e-52 182
MsG0580024321.01.T01 MTR_3g467400 34.837 399 192 16 24 390 5 367 3.44e-52 178
MsG0580024321.01.T01 MTR_3g082890 34.848 396 219 12 24 390 99 484 4.44e-52 181
MsG0580024321.01.T01 MTR_7g098570 33.422 377 228 9 24 386 22 389 1.19e-51 180
MsG0580024321.01.T01 MTR_5g008910 39.610 308 120 12 114 394 38 306 8.24e-51 173
MsG0580024321.01.T01 MTR_2g007450 34.186 430 221 15 6 387 2 417 2.68e-50 175
MsG0580024321.01.T01 MTR_3g108150 34.987 383 221 11 24 389 15 386 8.55e-50 172
MsG0580024321.01.T01 MTR_3g036250 33.862 378 215 11 24 387 7 363 1.16e-49 172
MsG0580024321.01.T01 MTR_7g056430 35.092 379 198 12 24 384 11 359 2.77e-48 176
MsG0580024321.01.T01 MTR_7g056420 34.828 379 199 12 24 384 11 359 2.86e-48 176
MsG0580024321.01.T01 MTR_3g082890 32.564 433 216 13 24 390 19 441 5.65e-48 169
MsG0580024321.01.T01 MTR_3g105060 32.979 376 225 8 24 390 16 373 1.82e-47 166
MsG0580024321.01.T01 MTR_6g022500 34.817 382 226 12 24 390 103 476 2.09e-47 169
MsG0580024321.01.T01 MTR_3g107160 33.163 392 235 12 15 390 3 383 2.97e-47 166
MsG0580024321.01.T01 MTR_3g087260 30.752 452 228 13 19 389 9 456 4.08e-47 167
MsG0580024321.01.T01 MTR_3g107100 35.190 395 219 13 24 390 13 398 4.09e-47 166
MsG0580024321.01.T01 MTR_1g107385 33.659 410 219 16 16 387 26 420 5.55e-47 166
MsG0580024321.01.T01 MTR_5g058100 35.279 394 228 13 16 392 3 386 1.24e-45 162
MsG0580024321.01.T01 MTR_6g045333 32.323 396 227 14 23 389 62 445 9.28e-45 160
MsG0580024321.01.T01 MTR_3g040700 32.394 355 206 8 12 352 33 367 1.10e-44 160
MsG0580024321.01.T01 MTR_3g023630 32.546 381 235 9 15 387 5 371 1.36e-44 159
MsG0580024321.01.T01 MTR_3g107120 32.398 392 225 10 23 387 10 388 1.72e-44 159
MsG0580024321.01.T01 MTR_5g007410 32.902 386 231 12 23 387 27 405 1.83e-43 157
MsG0580024321.01.T01 MTR_7g026500 30.713 407 237 15 14 389 2 394 4.00e-43 155
MsG0580024321.01.T01 MTR_7g034120 35.783 313 174 13 91 390 10 308 1.58e-42 151
MsG0580024321.01.T01 MTR_1g066830 33.077 390 224 14 24 389 10 386 2.38e-42 153
MsG0580024321.01.T01 MTR_6g040270 31.593 383 233 13 22 387 8 378 5.39e-42 152
MsG0580024321.01.T01 MTR_7g007080 33.499 403 227 17 19 397 1 386 1.98e-41 150
MsG0580024321.01.T01 MTR_2g008320 30.348 402 247 12 8 390 40 427 2.20e-41 152
MsG0580024321.01.T01 MTR_7g055943 34.336 399 229 14 16 392 36 423 3.58e-41 151
MsG0580024321.01.T01 MTR_1089s0010 30.990 384 234 14 24 390 10 379 9.67e-41 149
MsG0580024321.01.T01 MTR_1g053025 32.461 382 218 12 35 387 16 386 1.10e-40 149
MsG0580024321.01.T01 MTR_5g013500 34.278 353 196 11 57 390 30 365 4.56e-40 146
MsG0580024321.01.T01 MTR_1g085120 33.590 390 228 15 24 392 94 473 6.22e-40 148
MsG0580024321.01.T01 MTR_5g073420 31.169 385 228 13 24 389 13 379 7.77e-40 146
MsG0580024321.01.T01 MTR_1g085120 33.590 390 228 15 24 392 169 548 1.10e-39 149
MsG0580024321.01.T01 MTR_2g008310 30.990 384 232 13 24 390 4 371 1.14e-39 146
MsG0580024321.01.T01 MTR_2g007400 30.693 404 229 15 24 390 14 403 1.97e-39 145
MsG0580024321.01.T01 MTR_8g077460 30.542 406 222 16 13 390 2 375 2.66e-39 144
MsG0580024321.01.T01 MTR_7g075820 30.303 396 232 13 24 387 8 391 3.56e-39 144
MsG0580024321.01.T01 MTR_5g039490 32.426 404 220 16 5 389 6 375 1.79e-38 142
MsG0580024321.01.T01 MTR_2g005990 31.407 398 226 13 24 387 8 392 8.73e-38 141
MsG0580024321.01.T01 MTR_7g083740 30.691 391 225 10 13 389 8 366 2.27e-37 139
MsG0580024321.01.T01 MTR_5g039450 30.469 384 213 12 23 387 7 355 5.44e-37 138
MsG0580024321.01.T01 MTR_1g108820 31.486 397 216 17 24 387 10 383 6.21e-37 138
MsG0580024321.01.T01 MTR_5g058000 32.642 386 219 13 26 391 12 376 2.78e-36 136
MsG0580024321.01.T01 MTR_3g099830 31.156 398 224 17 12 387 2 371 3.64e-36 136
MsG0580024321.01.T01 MTR_6g011460 31.421 401 248 12 8 392 34 423 8.58e-36 136
MsG0580024321.01.T01 MTR_3g071850 29.873 395 240 14 15 382 17 401 1.36e-35 139
MsG0580024321.01.T01 MTR_5g045170 30.075 399 242 13 12 387 4 388 1.73e-35 135
MsG0580024321.01.T01 MTR_3g026920 30.120 415 206 15 24 387 21 402 3.58e-35 134
MsG0580024321.01.T01 MTR_7g007340 32.115 383 208 15 15 384 8 351 3.73e-35 133
MsG0580024321.01.T01 MTR_5g083890 30.556 396 223 14 24 379 8 391 5.22e-35 135
MsG0580024321.01.T01 MTR_7g056277 33.421 380 220 15 27 389 264 627 1.08e-34 135
MsG0580024321.01.T01 MTR_7g114710 31.525 387 208 14 24 390 15 364 1.42e-34 131
MsG0580024321.01.T01 MTR_0009s0080 31.608 367 221 11 16 359 8 367 1.75e-34 132
MsG0580024321.01.T01 MTR_7g056287 32.632 380 223 15 27 389 8 371 2.35e-34 131
MsG0580024321.01.T01 MTR_2g036470 31.111 405 245 14 9 389 1 395 3.20e-34 131
MsG0580024321.01.T01 MTR_4g080610 30.114 352 200 10 20 360 10 326 3.60e-34 130
MsG0580024321.01.T01 MTR_5g012840 31.781 365 183 14 40 390 6 318 4.04e-34 129
MsG0580024321.01.T01 MTR_4g039440 31.606 386 240 10 24 392 36 414 1.45e-33 130
MsG0580024321.01.T01 MTR_5g039470 31.454 337 202 12 38 355 1 327 2.53e-33 127
MsG0580024321.01.T01 MTR_7g060470 30.788 406 206 17 27 383 8 387 3.93e-33 128
MsG0580024321.01.T01 MTR_6g022360 33.073 384 218 13 24 389 45 407 6.11e-33 128
MsG0580024321.01.T01 MTR_1g108800 33.069 378 191 15 24 387 10 339 1.48e-32 125
MsG0580024321.01.T01 MTR_2g020180 35.371 229 118 6 166 390 13 215 1.11e-31 120
MsG0580024321.01.T01 MTR_7g034110 31.503 346 179 12 24 359 13 310 1.12e-31 123
MsG0580024321.01.T01 MTR_3g108560 32.646 291 171 9 20 298 18 295 3.00e-31 121
MsG0580024321.01.T01 MTR_7g021990 28.367 349 227 6 27 360 53 393 4.16e-31 123
MsG0580024321.01.T01 MTR_7g021950 28.367 349 227 6 27 360 53 393 1.12e-30 123
MsG0580024321.01.T01 MTR_3g109982 32.975 279 172 8 134 401 218 492 1.22e-30 124
MsG0580024321.01.T01 MTR_3g109982 36.500 200 111 6 21 209 12 206 1.50e-22 100
MsG0580024321.01.T01 MTR_7g056020 29.975 397 202 13 20 383 14 367 2.13e-30 123
MsG0580024321.01.T01 MTR_5g031970 28.497 386 231 11 11 387 4 353 2.60e-30 120
MsG0580024321.01.T01 MTR_2g007360 29.353 402 226 14 12 387 2 371 3.08e-30 120
MsG0580024321.01.T01 MTR_2g007550 29.723 397 188 15 12 387 6 332 3.10e-30 119
MsG0580024321.01.T01 MTR_7g056447 37.766 188 107 4 15 196 2 185 3.99e-29 115
MsG0580024321.01.T01 MTR_5g045510 29.199 387 225 14 23 387 10 369 4.01e-29 117
MsG0580024321.01.T01 MTR_4g134150 34.091 220 129 5 35 250 23 230 1.33e-28 112
MsG0580024321.01.T01 MTR_2g007500 30.986 355 189 13 13 338 7 334 1.73e-28 114
MsG0580024321.01.T01 MTR_7g022105 28.857 350 226 7 27 361 54 395 3.65e-28 115
MsG0580024321.01.T01 MTR_6g044572 29.126 412 220 15 24 390 4 388 7.45e-28 114
MsG0580024321.01.T01 MTR_4g098590 30.495 364 215 13 24 359 1 354 9.67e-28 113
MsG0580024321.01.T01 MTR_6g044560 29.647 425 223 17 12 390 170 564 1.03e-27 115
MsG0580024321.01.T01 MTR_5g073370 30.168 358 217 14 24 362 7 350 3.07e-27 112
MsG0580024321.01.T01 MTR_7g081290 42.857 140 73 3 255 390 120 256 4.92e-27 108
MsG0580024321.01.T01 MTR_5g063950 27.249 378 233 13 24 387 10 359 5.97e-27 110
MsG0580024321.01.T01 MTR_8g058965 28.078 463 245 19 9 390 1 456 8.94e-27 111
MsG0580024321.01.T01 MTR_8g085430 37.799 209 105 7 12 203 3 203 1.02e-25 106
MsG0580024321.01.T01 MTR_8g085430 42.857 112 57 3 285 389 216 327 2.31e-16 80.1
MsG0580024321.01.T01 MTR_5g084070 27.494 411 226 15 5 360 2 395 2.17e-25 107
MsG0580024321.01.T01 MTR_6g022520 35.366 328 180 14 84 392 1 315 1.39e-24 103
MsG0580024321.01.T01 MTR_1g085120 33.108 296 171 12 24 300 181 468 2.55e-24 104
MsG0580024321.01.T01 MTR_5g065100 26.963 382 228 13 20 389 6 348 5.22e-24 103
MsG0580024321.01.T01 MTR_1g038710 27.460 437 228 14 17 373 14 441 2.61e-23 101
MsG0580024321.01.T01 MTR_8g062310 26.437 435 255 16 5 390 10 428 2.82e-23 101
MsG0580024321.01.T01 MTR_2g083840 27.473 455 234 20 18 390 17 457 1.38e-22 99.8
MsG0580024321.01.T01 MTR_1g108820 30.063 316 173 14 14 300 2 298 1.77e-22 97.8
MsG0580024321.01.T01 MTR_3g110010 36.318 201 112 6 20 209 11 206 1.88e-22 100
MsG0580024321.01.T01 MTR_3g115430 45.217 115 53 4 280 390 17 125 8.41e-22 90.5
MsG0580024321.01.T01 MTR_5g073340 29.907 321 181 12 24 329 10 301 2.27e-21 94.0
MsG0580024321.01.T01 MTR_3g107940 41.406 128 66 2 261 386 89 209 2.46e-21 94.7
MsG0580024321.01.T01 MTR_5g061680 29.358 327 185 12 13 327 2 294 2.94e-21 94.0
MsG0580024321.01.T01 MTR_4g056020 26.253 419 226 15 17 361 4 413 7.20e-21 94.4
MsG0580024321.01.T01 MTR_2g007090 32.051 234 128 9 162 389 85 293 4.62e-20 90.1
MsG0580024321.01.T01 MTR_4g056040 26.457 446 221 17 17 361 4 443 2.94e-19 90.1
MsG0580024321.01.T01 MTR_5g061410 27.000 300 157 10 24 300 7 267 8.31e-19 86.3
MsG0580024321.01.T01 MTR_7g033945 35.976 164 89 5 24 175 13 172 1.57e-18 83.2
MsG0580024321.01.T01 MTR_5g054920 34.973 183 95 8 189 359 7 177 2.38e-18 82.8
MsG0580024321.01.T01 MTR_8g468760 26.047 430 250 16 14 389 3 418 2.75e-18 86.7
MsG0580024321.01.T01 MTR_7g007370 28.177 362 197 13 10 358 5 316 2.79e-18 85.9
MsG0580024321.01.T01 MTR_1g043170 48.780 82 37 2 311 390 10 88 5.15e-18 79.0
MsG0580024321.01.T01 MTR_8g062080 30.488 246 133 11 24 250 25 251 5.67e-18 85.9
MsG0580024321.01.T01 MTR_6g029350 33.540 161 90 6 234 387 45 195 8.21e-18 82.4
MsG0580024321.01.T01 MTR_7g056280 29.245 212 128 6 189 387 368 570 1.04e-16 82.4
MsG0580024321.01.T01 MTR_7g075800 26.598 391 214 15 26 355 13 391 3.67e-16 80.9
MsG0580024321.01.T01 MTR_4g055990 24.176 455 232 15 17 361 4 455 3.12e-15 77.8
MsG0580024321.01.T01 MTR_8g070950 37.143 210 97 11 20 210 13 206 3.16e-15 77.4
MsG0580024321.01.T01 MTR_4g055990 23.904 456 232 15 17 361 4 455 3.92e-15 77.4
MsG0580024321.01.T01 MTR_4g055580 24.889 450 229 16 17 361 95 540 4.56e-15 77.4
MsG0580024321.01.T01 MTR_3g108140 44.565 92 49 1 300 389 56 147 4.67e-15 73.2
MsG0580024321.01.T01 MTR_8g468810 33.005 203 112 8 16 199 19 216 5.44e-15 75.9
MsG0580024321.01.T01 MTR_7g056417 35.333 150 84 5 136 274 7 154 5.53e-15 72.4
MsG0580024321.01.T01 MTR_8g468810 33.005 203 112 8 16 199 19 216 6.27e-15 75.5
MsG0580024321.01.T01 MTR_8g014260 31.429 210 120 7 13 198 2 211 6.95e-15 76.3
MsG0580024321.01.T01 MTR_8g468810 33.005 203 112 8 16 199 19 216 7.34e-15 75.9
MsG0580024321.01.T01 MTR_8g468810 33.005 203 112 8 16 199 19 216 8.10e-15 75.5
MsG0580024321.01.T01 MTR_8g468810 33.005 203 112 8 16 199 19 216 1.24e-14 75.9
MsG0580024321.01.T01 MTR_7g034090 35.252 139 81 5 255 389 178 311 1.26e-14 75.5
MsG0580024321.01.T01 MTR_5g024060 36.923 130 75 4 259 386 80 204 2.67e-14 72.8
MsG0580024321.01.T01 MTR_3g071790 33.333 147 82 6 219 353 60 202 5.08e-14 70.9
MsG0580024321.01.T01 MTR_8g445780 26.154 260 170 9 20 266 11 261 6.66e-14 73.2
MsG0580024321.01.T01 MTR_1377s0010 40.385 104 58 3 259 362 31 130 6.90e-14 68.9
MsG0580024321.01.T01 MTR_4g056070 25.843 445 203 20 17 345 4 437 8.60e-14 73.2
MsG0580024321.01.T01 MTR_3g114200 35.000 160 92 5 5 156 2 157 1.16e-13 68.9
MsG0580024321.01.T01 MTR_3g095600 25.474 369 180 15 24 380 6 291 1.73e-13 70.9
MsG0580024321.01.T01 MTR_5g080710 35.644 202 116 8 13 205 24 220 2.10e-13 72.0
MsG0580024321.01.T01 MTR_8g469020 32.178 202 110 6 24 198 9 210 2.12e-13 72.0
MsG0580024321.01.T01 MTR_7g033940 40.367 109 58 3 24 128 96 201 3.46e-13 68.9
MsG0580024321.01.T01 MTR_3g094980 41.176 85 44 2 280 359 34 117 3.50e-13 67.8
MsG0580024321.01.T01 MTR_8g058970 27.826 230 127 10 4 199 3 227 5.69e-13 70.5
MsG0580024321.01.T01 MTR_8g058970 39.640 111 59 4 286 390 369 477 4.66e-12 67.8
MsG0580024321.01.T01 MTR_2g007530 36.434 129 58 4 259 387 230 334 8.14e-13 69.3
MsG0580024321.01.T01 MTR_4g096730 41.772 79 45 1 312 390 12 89 1.14e-12 64.3
MsG0580024321.01.T01 MTR_2g007610 34.146 123 70 3 280 396 40 157 1.51e-12 65.9
MsG0580024321.01.T01 MTR_5g021550 28.916 166 97 5 1 149 1 162 2.00e-12 65.5
MsG0580024321.01.T01 MTR_3g107140 33.333 186 100 6 44 209 12 193 3.10e-12 65.9
MsG0580024321.01.T01 MTR_8g014160 31.884 207 115 8 15 199 34 236 3.57e-12 68.2
MsG0580024321.01.T01 MTR_3g106960 33.333 135 77 5 261 391 74 199 5.21e-12 65.9
MsG0580024321.01.T01 MTR_4g056030 26.102 295 191 8 85 361 128 413 6.90e-12 67.4
MsG0580024321.01.T01 MTR_7g023310 26.540 211 148 5 5 210 10 218 8.41e-12 67.0
MsG0580024321.01.T01 MTR_3g113782 55.102 49 22 0 20 68 15 63 1.64e-11 60.5
MsG0580024321.01.T01 MTR_7g110920 30.435 161 79 6 231 361 142 299 2.81e-11 64.7
MsG0580024321.01.T01 MTR_8g014290 26.752 157 91 4 16 149 4 159 3.31e-11 61.6
MsG0580024321.01.T01 MTR_5g033200 31.724 145 92 4 221 364 13 151 8.83e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024321.01.T01 AT4G26340 27.778 432 231 15 24 390 4 419 4.07e-30 120
MsG0580024321.01.T01 AT1G32375 26.606 436 234 18 24 390 4 422 1.18e-25 108
MsG0580024321.01.T01 AT1G32375 26.606 436 234 18 24 390 4 422 1.18e-25 108
MsG0580024321.01.T01 AT1G55660 26.490 453 257 16 12 389 40 491 1.55e-25 108
MsG0580024321.01.T01 AT4G10400 25.420 417 248 12 24 389 4 408 3.81e-25 106
MsG0580024321.01.T01 AT4G10400 25.420 417 248 12 24 389 4 408 3.81e-25 106
MsG0580024321.01.T01 AT4G10400 25.420 417 248 12 24 389 4 408 3.81e-25 106
MsG0580024321.01.T01 AT4G00315 26.897 435 245 15 27 389 7 440 6.23e-25 106
MsG0580024321.01.T01 AT3G50710 24.775 444 237 15 24 390 4 427 2.58e-24 104
MsG0580024321.01.T01 AT5G56420 26.353 425 245 16 24 390 8 422 2.68e-24 104
MsG0580024321.01.T01 AT5G56420 26.353 425 245 16 24 390 8 422 2.68e-24 104
MsG0580024321.01.T01 AT5G56420 26.353 425 245 16 24 390 8 422 2.68e-24 104
MsG0580024321.01.T01 AT5G56380 26.067 445 236 16 27 390 7 439 8.97e-24 102
MsG0580024321.01.T01 AT5G56380 26.067 445 236 16 27 390 7 439 8.97e-24 102
MsG0580024321.01.T01 AT3G52680 25.682 440 251 16 21 394 20 449 7.82e-23 100
MsG0580024321.01.T01 AT5G56560 25.714 420 259 15 20 390 3 418 3.75e-22 97.8
MsG0580024321.01.T01 AT5G22730 24.831 443 245 18 24 387 30 463 7.08e-22 97.4
MsG0580024321.01.T01 AT5G22730 24.831 443 245 18 24 387 30 463 7.08e-22 97.4
MsG0580024321.01.T01 AT4G00160 27.628 409 211 19 21 361 15 406 1.01e-21 97.1
MsG0580024321.01.T01 AT1G50980 26.124 356 219 11 14 361 24 343 3.90e-21 94.4
MsG0580024321.01.T01 AT1G51370 23.182 440 266 16 5 385 4 430 1.84e-20 93.2
MsG0580024321.01.T01 AT5G56440 26.879 439 229 18 27 389 7 429 3.85e-20 92.0
MsG0580024321.01.T01 AT4G14103 36.458 192 102 7 21 198 7 192 1.71e-19 90.5
MsG0580024321.01.T01 AT4G14103 36.458 192 102 7 21 198 7 192 1.75e-19 89.7
MsG0580024321.01.T01 AT4G14103 36.458 192 102 7 21 198 7 192 1.75e-19 89.7
MsG0580024321.01.T01 AT4G13965 27.136 398 218 15 19 358 7 390 8.81e-19 88.2
MsG0580024321.01.T01 AT3G59200 35.052 194 108 7 19 198 4 193 1.37e-18 87.0
MsG0580024321.01.T01 AT3G49030 23.624 436 255 16 19 389 18 440 1.88e-18 87.4
MsG0580024321.01.T01 AT3G59200 35.052 194 108 7 19 198 4 193 2.43e-18 87.4
MsG0580024321.01.T01 AT1G55660 31.658 199 123 6 12 198 40 237 2.97e-18 85.9
MsG0580024321.01.T01 AT5G53635 22.991 448 239 16 24 389 2 425 3.41e-18 86.3
MsG0580024321.01.T01 AT5G22670 33.690 187 112 4 27 210 16 193 4.24e-18 86.3
MsG0580024321.01.T01 AT5G56820 25.581 430 225 14 27 387 20 423 5.38e-18 85.9
MsG0580024321.01.T01 AT1G16930 22.697 445 254 12 24 390 17 449 1.23e-16 81.6
MsG0580024321.01.T01 AT1G16930 22.697 445 254 12 24 390 17 449 1.23e-16 81.6
MsG0580024321.01.T01 AT1G16930 22.697 445 254 12 24 390 17 449 1.23e-16 81.6
MsG0580024321.01.T01 AT1G78750 23.060 464 267 18 4 387 2 455 3.47e-16 80.5
MsG0580024321.01.T01 AT1G78750 23.060 464 267 18 4 387 2 455 3.47e-16 80.5
MsG0580024321.01.T01 AT5G38590 34.066 182 108 6 24 198 4 180 1.01e-15 77.4
MsG0580024321.01.T01 AT5G38590 34.066 182 108 6 24 198 4 180 1.54e-15 78.2
MsG0580024321.01.T01 AT1G51370 23.058 399 233 15 5 339 4 392 1.74e-15 78.2
MsG0580024321.01.T01 AT1G80470 28.261 184 126 3 20 198 13 195 1.95e-15 78.2
MsG0580024321.01.T01 AT5G22730 26.293 232 146 6 24 233 30 258 2.55e-15 77.4
MsG0580024321.01.T01 AT2G26860 29.646 226 134 6 24 235 4 218 3.18e-15 77.4
MsG0580024321.01.T01 AT2G26860 29.646 226 134 6 24 235 4 218 3.18e-15 77.4
MsG0580024321.01.T01 AT1G78760 22.697 445 249 16 20 387 14 440 4.33e-15 77.0
MsG0580024321.01.T01 AT3G26930 25.400 437 240 18 24 390 23 443 5.56e-15 76.6
MsG0580024321.01.T01 AT5G25850 29.384 211 133 5 5 208 3 204 1.02e-14 76.3
MsG0580024321.01.T01 AT5G25860 21.940 433 235 13 21 368 11 425 1.53e-14 75.5
MsG0580024321.01.T01 AT5G62970 25.272 459 215 19 34 389 15 448 1.54e-14 75.5
MsG0580024321.01.T01 AT1G60400 30.435 184 115 3 24 198 16 195 2.10e-14 74.7
MsG0580024321.01.T01 AT1G51055 38.261 115 64 4 280 390 50 161 2.24e-14 70.9
MsG0580024321.01.T01 AT3G26920 27.338 278 164 10 135 389 38 300 2.38e-14 73.6
MsG0580024321.01.T01 AT3G58960 30.729 192 119 6 24 205 4 191 3.08e-14 74.7
MsG0580024321.01.T01 AT4G09920 30.978 184 109 6 26 198 6 182 3.17e-14 73.2
MsG0580024321.01.T01 AT4G09920 30.978 184 109 6 26 198 6 182 3.17e-14 73.2
MsG0580024321.01.T01 AT4G09920 30.978 184 109 6 26 198 6 182 3.17e-14 73.2
MsG0580024321.01.T01 AT4G09920 30.978 184 109 6 26 198 6 182 3.35e-14 73.6
MsG0580024321.01.T01 AT4G09920 30.978 184 109 6 26 198 6 182 3.35e-14 73.6
MsG0580024321.01.T01 AT5G56370 36.111 180 97 7 27 196 7 178 3.44e-14 73.6
MsG0580024321.01.T01 AT4G14096 33.854 192 105 8 21 198 7 190 3.56e-14 74.3
MsG0580024321.01.T01 AT4G14096 33.854 192 105 8 21 198 7 190 3.56e-14 74.3
MsG0580024321.01.T01 AT5G56370 36.111 180 97 7 27 196 7 178 3.70e-14 73.9
MsG0580024321.01.T01 AT5G56370 36.111 180 97 7 27 196 7 178 3.70e-14 73.9
MsG0580024321.01.T01 AT1G51370 26.531 196 134 4 5 198 4 191 4.87e-14 73.2
MsG0580024321.01.T01 AT5G53640 26.500 200 131 6 6 198 6 196 5.70e-14 71.2
MsG0580024321.01.T01 AT4G13960 33.659 205 108 8 24 210 4 198 7.05e-14 73.6
MsG0580024321.01.T01 AT4G13960 33.659 205 108 8 24 210 4 198 7.05e-14 73.6
MsG0580024321.01.T01 AT1G66300 22.436 468 267 16 1 387 1 453 7.35e-14 73.6
MsG0580024321.01.T01 AT3G59240 30.151 199 125 5 21 207 7 203 9.68e-14 73.2
MsG0580024321.01.T01 AT5G53840 28.934 197 128 6 8 198 3 193 1.15e-13 72.8
MsG0580024321.01.T01 AT2G29930 29.032 217 136 6 24 233 14 219 1.26e-13 72.8
MsG0580024321.01.T01 AT2G29930 29.032 217 136 6 24 233 14 219 1.26e-13 72.8
MsG0580024321.01.T01 AT1G66290 25.980 204 140 4 1 196 1 201 1.50e-13 72.4
MsG0580024321.01.T01 AT1G69630 22.246 463 265 18 4 387 2 448 3.38e-13 71.2
MsG0580024321.01.T01 AT3G58860 33.168 202 109 8 27 210 12 205 3.89e-13 71.2
MsG0580024321.01.T01 AT5G44940 25.556 360 232 13 24 364 7 349 6.39e-13 70.1
MsG0580024321.01.T01 AT1G60410 29.570 186 121 4 21 198 9 192 9.86e-13 69.7
MsG0580024321.01.T01 AT3G60040 28.571 203 123 4 27 207 18 220 1.09e-12 70.1
MsG0580024321.01.T01 AT5G56810 31.373 204 128 5 15 208 4 205 1.22e-12 69.7
MsG0580024321.01.T01 AT5G56560 29.082 196 132 6 20 211 3 195 1.40e-12 69.7
MsG0580024321.01.T01 AT5G38590 29.665 209 131 7 24 220 4 208 1.48e-12 68.2
MsG0580024321.01.T01 AT3G58930 32.057 209 106 8 24 205 4 203 1.53e-12 69.3
MsG0580024321.01.T01 AT3G58930 32.057 209 106 8 24 205 4 203 1.53e-12 69.3
MsG0580024321.01.T01 AT3G58930 32.057 209 106 8 24 205 4 203 1.53e-12 69.3
MsG0580024321.01.T01 AT5G56810 31.373 204 128 5 15 208 4 205 1.57e-12 68.2
MsG0580024321.01.T01 AT3G60040 28.571 203 123 4 27 207 237 439 1.75e-12 69.7
MsG0580024321.01.T01 AT3G60040 28.571 203 123 4 27 207 235 437 1.80e-12 69.3
MsG0580024321.01.T01 AT3G60040 28.571 203 123 4 27 207 237 439 1.81e-12 69.3
MsG0580024321.01.T01 AT3G60040 28.571 203 123 4 27 207 238 440 1.84e-12 69.7
MsG0580024321.01.T01 AT3G59150 31.443 194 113 5 23 200 14 203 2.04e-12 68.9
MsG0580024321.01.T01 AT3G52680 33.158 190 109 7 21 199 20 202 2.27e-12 68.2
MsG0580024321.01.T01 AT1G66310 28.218 202 135 5 1 198 1 196 2.70e-12 68.6
MsG0580024321.01.T01 AT1G26890 30.952 168 108 4 18 182 34 196 2.82e-12 67.4
MsG0580024321.01.T01 AT1G26890 30.952 168 108 4 18 182 34 196 2.82e-12 67.4
MsG0580024321.01.T01 AT3G26920 26.688 311 163 13 135 389 38 339 3.96e-12 67.4
MsG0580024321.01.T01 AT3G26920 26.688 311 163 13 135 389 38 339 3.96e-12 67.4
MsG0580024321.01.T01 AT3G58900 33.158 190 103 9 26 198 6 188 4.12e-12 67.0
MsG0580024321.01.T01 AT3G58900 33.158 190 103 9 26 198 6 188 5.16e-12 67.8
MsG0580024321.01.T01 AT1G26890 30.952 168 108 4 18 182 34 196 5.17e-12 67.4
MsG0580024321.01.T01 AT3G58900 33.158 190 103 9 26 198 6 188 5.64e-12 67.0
MsG0580024321.01.T01 AT3G58900 33.158 190 103 9 26 198 6 188 5.64e-12 67.0
MsG0580024321.01.T01 AT1G26890 30.952 168 108 4 18 182 34 196 5.97e-12 67.0
MsG0580024321.01.T01 AT1G26890 30.952 168 108 4 18 182 34 196 5.97e-12 67.0
MsG0580024321.01.T01 AT4G15060 28.495 186 118 5 24 198 28 209 6.55e-12 67.4
MsG0580024321.01.T01 AT2G42730 27.979 193 123 5 21 198 4 195 6.62e-12 67.4
MsG0580024321.01.T01 AT5G56800 33.929 112 70 3 280 389 234 343 7.41e-12 66.6
MsG0580024321.01.T01 AT5G44490 26.178 191 129 4 17 198 12 199 8.19e-12 67.0
MsG0580024321.01.T01 AT4G15060 28.495 186 118 5 24 198 174 355 9.04e-12 67.0
MsG0580024321.01.T01 AT2G26030 27.604 192 129 6 26 210 8 196 9.46e-12 66.6
MsG0580024321.01.T01 AT2G26030 27.604 192 129 6 26 210 8 196 9.46e-12 66.6
MsG0580024321.01.T01 AT2G26030 27.604 192 129 6 26 210 8 196 9.75e-12 66.6
MsG0580024321.01.T01 AT5G44490 26.178 191 129 4 17 198 12 199 1.02e-11 66.6
MsG0580024321.01.T01 AT5G56690 30.052 193 108 9 24 198 4 187 1.10e-11 66.6
MsG0580024321.01.T01 AT3G59230 24.777 448 226 23 21 366 11 449 1.18e-11 66.6
MsG0580024321.01.T01 AT3G58980 31.515 165 100 6 24 179 4 164 1.65e-11 66.2
MsG0580024321.01.T01 AT1G66320 26.943 193 133 4 12 199 19 208 1.85e-11 65.9
MsG0580024321.01.T01 AT3G03040 30.732 205 117 7 24 209 4 202 2.37e-11 65.9
MsG0580024321.01.T01 AT4G26350 29.508 183 110 6 28 199 8 182 3.55e-11 65.1
MsG0580024321.01.T01 AT3G44810 28.571 231 135 5 17 232 2 217 4.39e-11 64.7
MsG0580024321.01.T01 AT3G52690 26.050 238 146 9 167 389 75 297 6.57e-11 63.2
MsG0580024321.01.T01 AT5G41840 29.064 203 118 6 19 198 11 210 8.57e-11 63.9

Find 105 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATATGGTGGCGCTAAA+AGG 0.140591 5:+3349738 MsG0580024321.01.T01:CDS
CATTCTTGCTCTGACCAATT+TGG 0.166989 5:-3350060 None:intergenic
TATTTGAATGATATCAAATT+TGG 0.193456 5:+3349912 MsG0580024321.01.T01:CDS
TTTCCACTTCTTTCTTAATA+TGG 0.231529 5:+3349725 MsG0580024321.01.T01:CDS
ATTTGATATCATTCAAATAT+AGG 0.249673 5:-3349908 None:intergenic
GCAAGATCCCTACAATTTAT+TGG 0.251828 5:+3349993 MsG0580024321.01.T01:CDS
TTTGATATCATTCAAATATA+GGG 0.260093 5:-3349907 None:intergenic
GCATAATATATTTAGCGAAT+TGG 0.269416 5:-3350616 None:intergenic
AGAGAGAAAGTTTCCAATAT+TGG 0.271471 5:-3350701 None:intergenic
ATTCTTGCTCTGACCAATTT+GGG 0.322709 5:-3350059 None:intergenic
GTAGAAGCTATAAGGCAATT+TGG 0.324066 5:-3349796 None:intergenic
TACTCTACACATTGATATAA+AGG 0.325652 5:+3350676 MsG0580024321.01.T01:CDS
AGATAAACCCTTACCCAAAT+TGG 0.337731 5:+3350046 MsG0580024321.01.T01:CDS
TGCTCTGACCAATTTGGGTA+AGG 0.343853 5:-3350054 None:intergenic
TGTCTAGTATTAATTGTTGT+TGG 0.345239 5:-3350979 None:intergenic
TGATATAAAGGATCCAATAT+TGG 0.347645 5:+3350688 MsG0580024321.01.T01:CDS
TTGATGCAAACTGCGGTTGC+AGG 0.351621 5:+3350852 MsG0580024321.01.T01:three_prime_UTR
CATAATATATTTAGCGAATT+GGG 0.355665 5:-3350615 None:intergenic
AAGCATAGGAAACGGGGTAT+AGG 0.359633 5:-3350093 None:intergenic
AGCATAGGAAACGGGGTATA+GGG 0.365815 5:-3350092 None:intergenic
TGCATGTAAATATTCAAGAT+TGG 0.376320 5:-3349973 None:intergenic
CTGGATTAGATTGTGAAACT+TGG 0.398834 5:-3350281 None:intergenic
TTAATATGGTGGCGCTAAAA+GGG 0.400452 5:+3349739 MsG0580024321.01.T01:CDS
TTGCAACCGTAGAAGCTATA+AGG 0.400555 5:-3349804 None:intergenic
AACGATGTTGGGCCGGTTGT+AGG 0.410603 5:-3350763 None:intergenic
TTAAGAAAGAAGTGGAAATC+AGG 0.419857 5:-3349720 None:intergenic
GCATGTAAATATTCAAGATT+GGG 0.420230 5:-3349972 None:intergenic
ATGGTAAGACTTTGAAGCTT+AGG 0.422565 5:-3350376 None:intergenic
CAAAGAGATGGAAACCGCTT+TGG 0.422583 5:+3349547 MsG0580024321.01.T01:CDS
TCGGAAAACTTGCGGAAGTC+AGG 0.424094 5:-3349609 None:intergenic
CATTACAAAGCATAGGAAAC+GGG 0.426658 5:-3350100 None:intergenic
TTATCTCCCTCTTCCACTTG+TGG 0.435870 5:-3350029 None:intergenic
ATACGACGCCGAACATCGTT+AGG 0.441263 5:-3349477 None:intergenic
AAATATAGGGATTTGAGTAA+TGG 0.442401 5:-3349894 None:intergenic
TCATGAACTTGACCTTGGCT+TGG 0.443276 5:+3349764 MsG0580024321.01.T01:CDS
ACTTGAAAGTAAGGTCCATC+TGG 0.444214 5:-3350300 None:intergenic
AACTTTCTCTCTGTGTCCAA+GGG 0.446198 5:+3350712 MsG0580024321.01.T01:CDS
TACTTCTGAATTCGATTCAC+TGG 0.447084 5:-3349430 None:intergenic
CACAGGTGAGGCGTAATGAT+TGG 0.447727 5:-3349668 None:intergenic
AAACTTTCTCTCTGTGTCCA+AGG 0.450877 5:+3350711 MsG0580024321.01.T01:CDS
GCTGCAAAGTCATGTGGAAC+TGG 0.452811 5:+3350329 MsG0580024321.01.T01:CDS
AGCGTTGATACTTGAAAGTA+AGG 0.458749 5:-3350309 None:intergenic
TCTTCGCTTTGACCTACAAC+CGG 0.469256 5:+3350751 MsG0580024321.01.T01:CDS
CCACAATTGAAAACGATGTT+GGG 0.470227 5:-3350774 None:intergenic
TGTCACGACCAATAAATTGT+AGG 0.473845 5:-3350001 None:intergenic
GGAAAACTTGAGTTGACAAA+AGG 0.479543 5:-3349699 None:intergenic
GAGAACTGAGGTGACGAAAT+CGG 0.481048 5:-3349628 None:intergenic
AATAACATTGTGTAGCTTGA+GGG 0.482020 5:-3349838 None:intergenic
GCTCTGACCAATTTGGGTAA+GGG 0.483994 5:-3350053 None:intergenic
AAATTGCCTTATAGCTTCTA+CGG 0.487592 5:+3349798 MsG0580024321.01.T01:CDS
TAAATGAAGGCAATGAGCAC+TGG 0.489093 5:+3350507 MsG0580024321.01.T01:CDS
ACCACAATTGAAAACGATGT+TGG 0.496062 5:-3350775 None:intergenic
CCACTTCTTTCTTAATATGG+TGG 0.496777 5:+3349728 MsG0580024321.01.T01:CDS
TTAATACTAGACAGTTTCAA+TGG 0.502984 5:+3350989 MsG0580024321.01.T01:three_prime_UTR
CATTCCTCCACAAGTGGAAG+AGG 0.503097 5:+3350022 MsG0580024321.01.T01:CDS
TGGATTAGATTGTGAAACTT+GGG 0.504125 5:-3350280 None:intergenic
AGTCGCTTCCTAACGATGTT+CGG 0.506208 5:+3349469 MsG0580024321.01.T01:CDS
TGCCTTCATTTACACATGTG+TGG 0.515499 5:-3350496 None:intergenic
GGGGTTCATGAACTTGACCT+TGG 0.517943 5:+3349759 MsG0580024321.01.T01:CDS
CAAATTGGTCAGAGCAAGAA+TGG 0.520078 5:+3350061 MsG0580024321.01.T01:CDS
ATAGTTGCTAGGGAAGTATG+TGG 0.520408 5:+3350889 MsG0580024321.01.T01:three_prime_UTR
TCTCTTTGACAGAAGGCTGC+TGG 0.525192 5:-3349532 None:intergenic
GTTTCCATCTCTTTGACAGA+AGG 0.527118 5:-3349539 None:intergenic
GCATTACAAAGCATAGGAAA+CGG 0.527868 5:-3350101 None:intergenic
TCTCCCTCTTCCACTTGTGG+AGG 0.534393 5:-3350026 None:intergenic
GTCACGACCAATAAATTGTA+GGG 0.536533 5:-3350000 None:intergenic
TCAAAGTCTTACCATTTACA+AGG 0.536566 5:+3350384 MsG0580024321.01.T01:CDS
CTGGCAGCAGCATCTCTCGT+TGG 0.539918 5:-3349513 None:intergenic
GCTTTCTTTGACTTCAATGA+CGG 0.544896 5:+3349579 MsG0580024321.01.T01:CDS
AGACATGTCGGAACAATCTG+TGG 0.547179 5:-3350536 None:intergenic
AAATAACATTGTGTAGCTTG+AGG 0.550586 5:-3349839 None:intergenic
CAGCAGCATCTCTCGTTGGA+AGG 0.551060 5:-3349509 None:intergenic
AATTGAAAACGATGTTGGGC+CGG 0.557022 5:-3350770 None:intergenic
TTACATGTCGCAGAGCCCCT+TGG 0.557674 5:-3350728 None:intergenic
TTTATGGTTTCAGACTCAGT+TGG 0.557977 5:+3350935 MsG0580024321.01.T01:three_prime_UTR
AACCACACATGTGTAAATGA+AGG 0.562226 5:+3350494 MsG0580024321.01.T01:CDS
CCACCATATTAAGAAAGAAG+TGG 0.564017 5:-3349728 None:intergenic
TGGCGAAGATGTCGTGTGAT+GGG 0.570350 5:+3349388 MsG0580024321.01.T01:exon
GCAGCCTTCTGTCAAAGAGA+TGG 0.574540 5:+3349535 MsG0580024321.01.T01:CDS
TGGTTAAAGTGACCAAGCCA+AGG 0.577418 5:-3349776 None:intergenic
TTCACACTCAAATATTACAA+AGG 0.580831 5:+3350578 MsG0580024321.01.T01:CDS
GTGTGATGGGAAGAAGAAGA+TGG 0.583335 5:+3349401 MsG0580024321.01.T01:CDS
GTGGCGAAGATGTCGTGTGA+TGG 0.594948 5:+3349387 MsG0580024321.01.T01:exon
TAATATGGTGGCGCTAAAAG+GGG 0.596589 5:+3349740 MsG0580024321.01.T01:CDS
GTTTCACAATCTAATCCAGA+TGG 0.602694 5:+3350285 MsG0580024321.01.T01:CDS
GAGTAATGGAAAATCAACAT+AGG 0.603791 5:-3349880 None:intergenic
TCGTGACATTCCTCCACAAG+TGG 0.613715 5:+3350016 MsG0580024321.01.T01:CDS
GACAAAAGGATGAAAACCAC+AGG 0.621005 5:-3349685 None:intergenic
CAATCATTACGCCTCACCTG+TGG 0.621836 5:+3349669 MsG0580024321.01.T01:CDS
ATCAACGCTGCAAAGTCATG+TGG 0.625043 5:+3350323 MsG0580024321.01.T01:CDS
AGTTGTGTTGAAAGACATGT+CGG 0.625477 5:-3350548 None:intergenic
ATTCCTCCACAAGTGGAAGA+GGG 0.627939 5:+3350023 MsG0580024321.01.T01:CDS
TGAAGGCAATGAGCACTGGA+AGG 0.628693 5:+3350511 MsG0580024321.01.T01:CDS
AAAGCAAGTGAGAGCCAAAG+CGG 0.630116 5:-3349561 None:intergenic
ACTTTCTCTCTGTGTCCAAG+GGG 0.635528 5:+3350713 MsG0580024321.01.T01:CDS
CGTAATGATTGGACGGAGTG+CGG 0.636689 5:-3349657 None:intergenic
GGTGAGGCGTAATGATTGGA+CGG 0.641726 5:-3349664 None:intergenic
AATTGTGCATTACAAAGCAT+AGG 0.642963 5:-3350107 None:intergenic
AGAAGTAGAGAAGACAACGA+TGG 0.648802 5:+3349446 MsG0580024321.01.T01:CDS
GACATGTCGGAACAATCTGT+GGG 0.649703 5:-3350535 None:intergenic
AAGGATGAAAACCACAGGTG+AGG 0.670203 5:-3349680 None:intergenic
TGATTGGACGGAGTGCGGTG+AGG 0.684855 5:-3349652 None:intergenic
TGACGAAATCGGAAAACTTG+CGG 0.689639 5:-3349617 None:intergenic
ATTACAAAGCATAGGAAACG+GGG 0.716341 5:-3350099 None:intergenic
GTGCGGTGAGGAGAGAACTG+AGG 0.721541 5:-3349640 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGATATCATTCAAATAT+AGG - Chr5:3349911-3349930 None:intergenic 15.0%
!! TATTTGAATGATATCAAATT+TGG + Chr5:3349912-3349931 MsG0580024321.01.T01:CDS 15.0%
!! TTTGATATCATTCAAATATA+GGG - Chr5:3349910-3349929 None:intergenic 15.0%
!! CATAATATATTTAGCGAATT+GGG - Chr5:3350618-3350637 None:intergenic 20.0%
! AAATATAGGGATTTGAGTAA+TGG - Chr5:3349897-3349916 None:intergenic 25.0%
! ACAAAAACAAACCTTGTAAA+TGG - Chr5:3350398-3350417 None:intergenic 25.0%
! ACATAAAAACTCGAACATAA+TGG - Chr5:3349946-3349965 None:intergenic 25.0%
! GCATAATATATTTAGCGAAT+TGG - Chr5:3350619-3350638 None:intergenic 25.0%
! GCATGTAAATATTCAAGATT+GGG - Chr5:3349975-3349994 None:intergenic 25.0%
! TACTCTACACATTGATATAA+AGG + Chr5:3350676-3350695 MsG0580024321.01.T01:CDS 25.0%
! TGATATAAAGGATCCAATAT+TGG + Chr5:3350688-3350707 MsG0580024321.01.T01:CDS 25.0%
! TGCATGTAAATATTCAAGAT+TGG - Chr5:3349976-3349995 None:intergenic 25.0%
! TGTCTAGTATTAATTGTTGT+TGG - Chr5:3350982-3351001 None:intergenic 25.0%
! TTAATACTAGACAGTTTCAA+TGG + Chr5:3350989-3351008 MsG0580024321.01.T01:three_prime_UTR 25.0%
! TTCACACTCAAATATTACAA+AGG + Chr5:3350578-3350597 MsG0580024321.01.T01:CDS 25.0%
! TTTCCACTTCTTTCTTAATA+TGG + Chr5:3349725-3349744 MsG0580024321.01.T01:CDS 25.0%
!!! ATTATGTTCGAGTTTTTATG+TGG + Chr5:3349945-3349964 MsG0580024321.01.T01:CDS 25.0%
!!! CGTATTTTATTTTTGGCTAA+TGG + Chr5:3350449-3350468 MsG0580024321.01.T01:intron 25.0%
!!! TGCAGTATTTGATAGTTTTA+TGG + Chr5:3350919-3350938 MsG0580024321.01.T01:three_prime_UTR 25.0%
!!! TTTACAAGGTTTGTTTTTGT+TGG + Chr5:3350398-3350417 MsG0580024321.01.T01:intron 25.0%
AAAAATAAAATACGTGAGCG+TGG - Chr5:3350443-3350462 None:intergenic 30.0%
AAATAACATTGTGTAGCTTG+AGG - Chr5:3349842-3349861 None:intergenic 30.0%
AAATTGCCTTATAGCTTCTA+CGG + Chr5:3349798-3349817 MsG0580024321.01.T01:CDS 30.0%
AATAACATTGTGTAGCTTGA+GGG - Chr5:3349841-3349860 None:intergenic 30.0%
AATTGTGCATTACAAAGCAT+AGG - Chr5:3350110-3350129 None:intergenic 30.0%
AGAGAGAAAGTTTCCAATAT+TGG - Chr5:3350704-3350723 None:intergenic 30.0%
TCAAAGTCTTACCATTTACA+AGG + Chr5:3350384-3350403 MsG0580024321.01.T01:CDS 30.0%
TTAAGAAAGAAGTGGAAATC+AGG - Chr5:3349723-3349742 None:intergenic 30.0%
! GAGTAATGGAAAATCAACAT+AGG - Chr5:3349883-3349902 None:intergenic 30.0%
! TGGATTAGATTGTGAAACTT+GGG - Chr5:3350283-3350302 None:intergenic 30.0%
!! AGTAGATTTTGATAGTTGCT+AGG + Chr5:3350878-3350897 MsG0580024321.01.T01:three_prime_UTR 30.0%
!! GTAGATTTTGATAGTTGCTA+GGG + Chr5:3350879-3350898 MsG0580024321.01.T01:three_prime_UTR 30.0%
!!! ACGCTCACGTATTTTATTTT+TGG + Chr5:3350442-3350461 MsG0580024321.01.T01:intron 30.0%
AACCACACATGTGTAAATGA+AGG + Chr5:3350494-3350513 MsG0580024321.01.T01:CDS 35.0%
ACCACAATTGAAAACGATGT+TGG - Chr5:3350778-3350797 None:intergenic 35.0%
AGATAAACCCTTACCCAAAT+TGG + Chr5:3350046-3350065 MsG0580024321.01.T01:CDS 35.0%
AGTTGTGTTGAAAGACATGT+CGG - Chr5:3350551-3350570 None:intergenic 35.0%
ATTACAAAGCATAGGAAACG+GGG - Chr5:3350102-3350121 None:intergenic 35.0%
ATTCTTGCTCTGACCAATTT+GGG - Chr5:3350062-3350081 None:intergenic 35.0%
CATTACAAAGCATAGGAAAC+GGG - Chr5:3350103-3350122 None:intergenic 35.0%
CCACAATTGAAAACGATGTT+GGG - Chr5:3350777-3350796 None:intergenic 35.0%
CCACCATATTAAGAAAGAAG+TGG - Chr5:3349731-3349750 None:intergenic 35.0%
CCACTTCTTTCTTAATATGG+TGG + Chr5:3349728-3349747 MsG0580024321.01.T01:CDS 35.0%
GCAAGATCCCTACAATTTAT+TGG + Chr5:3349993-3350012 MsG0580024321.01.T01:CDS 35.0%
GCATTACAAAGCATAGGAAA+CGG - Chr5:3350104-3350123 None:intergenic 35.0%
GTAGAAGCTATAAGGCAATT+TGG - Chr5:3349799-3349818 None:intergenic 35.0%
GTCACGACCAATAAATTGTA+GGG - Chr5:3350003-3350022 None:intergenic 35.0%
GTTTCACAATCTAATCCAGA+TGG + Chr5:3350285-3350304 MsG0580024321.01.T01:CDS 35.0%
TACTTCTGAATTCGATTCAC+TGG - Chr5:3349433-3349452 None:intergenic 35.0%
TGTCACGACCAATAAATTGT+AGG - Chr5:3350004-3350023 None:intergenic 35.0%
TTTATGGTTTCAGACTCAGT+TGG + Chr5:3350935-3350954 MsG0580024321.01.T01:three_prime_UTR 35.0%
! CTGGATTAGATTGTGAAACT+TGG - Chr5:3350284-3350303 None:intergenic 35.0%
! GCTTTCTTTGACTTCAATGA+CGG + Chr5:3349579-3349598 MsG0580024321.01.T01:CDS 35.0%
! TTAATATGGTGGCGCTAAAA+GGG + Chr5:3349739-3349758 MsG0580024321.01.T01:CDS 35.0%
!! AGCGTTGATACTTGAAAGTA+AGG - Chr5:3350312-3350331 None:intergenic 35.0%
!! ATGGTAAGACTTTGAAGCTT+AGG - Chr5:3350379-3350398 None:intergenic 35.0%
!! CATTGACTCTACTGCAATTT+AGG + Chr5:3351012-3351031 MsG0580024321.01.T01:three_prime_UTR 35.0%
!! CTTTTTCACAGAAGAAGTTG+TGG + Chr5:3349368-3349387 MsG0580024321.01.T01:five_prime_UTR 35.0%
!! GGAAAACTTGAGTTGACAAA+AGG - Chr5:3349702-3349721 None:intergenic 35.0%
!! GTTCATTTTGATGCAAACTG+CGG + Chr5:3350845-3350864 MsG0580024321.01.T01:three_prime_UTR 35.0%
AAACTTTCTCTCTGTGTCCA+AGG + Chr5:3350711-3350730 MsG0580024321.01.T01:CDS 40.0%
AACTTTCTCTCTGTGTCCAA+GGG + Chr5:3350712-3350731 MsG0580024321.01.T01:CDS 40.0%
AATTGAAAACGATGTTGGGC+CGG - Chr5:3350773-3350792 None:intergenic 40.0%
ACTTGAAAGTAAGGTCCATC+TGG - Chr5:3350303-3350322 None:intergenic 40.0%
AGAAGTAGAGAAGACAACGA+TGG + Chr5:3349446-3349465 MsG0580024321.01.T01:CDS 40.0%
CAAATTGGTCAGAGCAAGAA+TGG + Chr5:3350061-3350080 MsG0580024321.01.T01:CDS 40.0%
CATTCTTGCTCTGACCAATT+TGG - Chr5:3350063-3350082 None:intergenic 40.0%
GACAAAAGGATGAAAACCAC+AGG - Chr5:3349688-3349707 None:intergenic 40.0%
GTTTCCATCTCTTTGACAGA+AGG - Chr5:3349542-3349561 None:intergenic 40.0%
TAAATGAAGGCAATGAGCAC+TGG + Chr5:3350507-3350526 MsG0580024321.01.T01:CDS 40.0%
TGACGAAATCGGAAAACTTG+CGG - Chr5:3349620-3349639 None:intergenic 40.0%
TGCCTTCATTTACACATGTG+TGG - Chr5:3350499-3350518 None:intergenic 40.0%
TTGCAACCGTAGAAGCTATA+AGG - Chr5:3349807-3349826 None:intergenic 40.0%
! ATAGTTGCTAGGGAAGTATG+TGG + Chr5:3350889-3350908 MsG0580024321.01.T01:three_prime_UTR 40.0%
! CCCAACATCGTTTTCAATTG+TGG + Chr5:3350774-3350793 MsG0580024321.01.T01:CDS 40.0%
! CTTAATATGGTGGCGCTAAA+AGG + Chr5:3349738-3349757 MsG0580024321.01.T01:CDS 40.0%
! TAATATGGTGGCGCTAAAAG+GGG + Chr5:3349740-3349759 MsG0580024321.01.T01:CDS 40.0%
AAAGCAAGTGAGAGCCAAAG+CGG - Chr5:3349564-3349583 None:intergenic 45.0%
AAGCATAGGAAACGGGGTAT+AGG - Chr5:3350096-3350115 None:intergenic 45.0%
AAGGATGAAAACCACAGGTG+AGG - Chr5:3349683-3349702 None:intergenic 45.0%
ACTTTCTCTCTGTGTCCAAG+GGG + Chr5:3350713-3350732 MsG0580024321.01.T01:CDS 45.0%
AGACATGTCGGAACAATCTG+TGG - Chr5:3350539-3350558 None:intergenic 45.0%
AGCATAGGAAACGGGGTATA+GGG - Chr5:3350095-3350114 None:intergenic 45.0%
AGTCGCTTCCTAACGATGTT+CGG + Chr5:3349469-3349488 MsG0580024321.01.T01:CDS 45.0%
ATCAACGCTGCAAAGTCATG+TGG + Chr5:3350323-3350342 MsG0580024321.01.T01:CDS 45.0%
ATTCCTCCACAAGTGGAAGA+GGG + Chr5:3350023-3350042 MsG0580024321.01.T01:CDS 45.0%
CAAAGAGATGGAAACCGCTT+TGG + Chr5:3349547-3349566 MsG0580024321.01.T01:CDS 45.0%
GACATGTCGGAACAATCTGT+GGG - Chr5:3350538-3350557 None:intergenic 45.0%
GAGAACTGAGGTGACGAAAT+CGG - Chr5:3349631-3349650 None:intergenic 45.0%
GCTCTGACCAATTTGGGTAA+GGG - Chr5:3350056-3350075 None:intergenic 45.0%
TCATGAACTTGACCTTGGCT+TGG + Chr5:3349764-3349783 MsG0580024321.01.T01:CDS 45.0%
TCTTCGCTTTGACCTACAAC+CGG + Chr5:3350751-3350770 MsG0580024321.01.T01:CDS 45.0%
TGCTCTGACCAATTTGGGTA+AGG - Chr5:3350057-3350076 None:intergenic 45.0%
TGGTTAAAGTGACCAAGCCA+AGG - Chr5:3349779-3349798 None:intergenic 45.0%
TTATCTCCCTCTTCCACTTG+TGG - Chr5:3350032-3350051 None:intergenic 45.0%
! AATGCACAATTTTTGCGCGC+AGG + Chr5:3350119-3350138 MsG0580024321.01.T01:CDS 45.0%
! ACAATTTTTGCGCGCAGGAA+TGG + Chr5:3350124-3350143 MsG0580024321.01.T01:CDS 45.0%
! GTGTGATGGGAAGAAGAAGA+TGG + Chr5:3349401-3349420 MsG0580024321.01.T01:CDS 45.0%
ATACGACGCCGAACATCGTT+AGG - Chr5:3349480-3349499 None:intergenic 50.0%
CAATCATTACGCCTCACCTG+TGG + Chr5:3349669-3349688 MsG0580024321.01.T01:CDS 50.0%
CACAGGTGAGGCGTAATGAT+TGG - Chr5:3349671-3349690 None:intergenic 50.0%
CATTCCTCCACAAGTGGAAG+AGG + Chr5:3350022-3350041 MsG0580024321.01.T01:CDS 50.0%
CGTAATGATTGGACGGAGTG+CGG - Chr5:3349660-3349679 None:intergenic 50.0%
GCAGCCTTCTGTCAAAGAGA+TGG + Chr5:3349535-3349554 MsG0580024321.01.T01:CDS 50.0%
GCTGCAAAGTCATGTGGAAC+TGG + Chr5:3350329-3350348 MsG0580024321.01.T01:CDS 50.0%
GGGGTTCATGAACTTGACCT+TGG + Chr5:3349759-3349778 MsG0580024321.01.T01:CDS 50.0%
GGTGAGGCGTAATGATTGGA+CGG - Chr5:3349667-3349686 None:intergenic 50.0%
TCGGAAAACTTGCGGAAGTC+AGG - Chr5:3349612-3349631 None:intergenic 50.0%
TCGTGACATTCCTCCACAAG+TGG + Chr5:3350016-3350035 MsG0580024321.01.T01:CDS 50.0%
TCTCTTTGACAGAAGGCTGC+TGG - Chr5:3349535-3349554 None:intergenic 50.0%
TGGCGAAGATGTCGTGTGAT+GGG + Chr5:3349388-3349407 MsG0580024321.01.T01:exon 50.0%
TTGATGCAAACTGCGGTTGC+AGG + Chr5:3350852-3350871 MsG0580024321.01.T01:three_prime_UTR 50.0%
!! TGAAGGCAATGAGCACTGGA+AGG + Chr5:3350511-3350530 MsG0580024321.01.T01:CDS 50.0%
AACGATGTTGGGCCGGTTGT+AGG - Chr5:3350766-3350785 None:intergenic 55.0%
CAGCAGCATCTCTCGTTGGA+AGG - Chr5:3349512-3349531 None:intergenic 55.0%
GTGGCGAAGATGTCGTGTGA+TGG + Chr5:3349387-3349406 MsG0580024321.01.T01:exon 55.0%
TCTCCCTCTTCCACTTGTGG+AGG - Chr5:3350029-3350048 None:intergenic 55.0%
TTACATGTCGCAGAGCCCCT+TGG - Chr5:3350731-3350750 None:intergenic 55.0%
CTGGCAGCAGCATCTCTCGT+TGG - Chr5:3349516-3349535 None:intergenic 60.0%
GTGCGGTGAGGAGAGAACTG+AGG - Chr5:3349643-3349662 None:intergenic 60.0%
TGATTGGACGGAGTGCGGTG+AGG - Chr5:3349655-3349674 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 3349362 3351031 3349362 ID=MsG0580024321.01;Name=MsG0580024321.01
Chr5 mRNA 3349362 3351031 3349362 ID=MsG0580024321.01.T01;Parent=MsG0580024321.01;Name=MsG0580024321.01.T01;_AED=0.26;_eAED=0.26;_QI=34|1|1|1|1|1|3|229|402
Chr5 exon 3349362 3350145 3349362 ID=MsG0580024321.01.T01:exon:1051;Parent=MsG0580024321.01.T01
Chr5 exon 3350256 3350405 3350256 ID=MsG0580024321.01.T01:exon:1052;Parent=MsG0580024321.01.T01
Chr5 exon 3350494 3351031 3350494 ID=MsG0580024321.01.T01:exon:1053;Parent=MsG0580024321.01.T01
Chr5 five_prime_UTR 3349362 3349395 3349362 ID=MsG0580024321.01.T01:five_prime_utr;Parent=MsG0580024321.01.T01
Chr5 CDS 3349396 3350145 3349396 ID=MsG0580024321.01.T01:cds;Parent=MsG0580024321.01.T01
Chr5 CDS 3350256 3350405 3350256 ID=MsG0580024321.01.T01:cds;Parent=MsG0580024321.01.T01
Chr5 CDS 3350494 3350802 3350494 ID=MsG0580024321.01.T01:cds;Parent=MsG0580024321.01.T01
Chr5 three_prime_UTR 3350803 3351031 3350803 ID=MsG0580024321.01.T01:three_prime_utr;Parent=MsG0580024321.01.T01
Gene Sequence

>MsG0580024321.01.T01

ATGTCGTGTGATGGGAAGAAGAAGATGGAGTTTTCCAGTGAATCGAATTCAGAAGTAGAGAAGACAACGATGGAGTCGCTTCCTAACGATGTTCGGCGTCGTATTCTGTCATTCCTTCCAACGAGAGATGCTGCTGCCAGCAGCCTTCTGTCAAAGAGATGGAAACCGCTTTGGCTCTCACTTGCTTTCTTTGACTTCAATGACGGATACTTTCCTGACTTCCGCAAGTTTTCCGATTTCGTCACCTCAGTTCTCTCCTCACCGCACTCCGTCCAATCATTACGCCTCACCTGTGGTTTTCATCCTTTTGTCAACTCAAGTTTTCCTGATTTCCACTTCTTTCTTAATATGGTGGCGCTAAAAGGGGTTCATGAACTTGACCTTGGCTTGGTCACTTTAACCAAATTGCCTTATAGCTTCTACGGTTGCAAGACTCTTGTCACCCTCAAGCTACACAATGTTATTTTGATTTTGATTGACTCTTCCTATGTTGATTTTCCATTACTCAAATCCCTATATTTGAATGATATCAAATTTGGAAGTCAAGCCATTATGTTCGAGTTTTTATGTGGATGTCCCAATCTTGAATATTTACATGCAAGATCCCTACAATTTATTGGTCGTGACATTCCTCCACAAGTGGAAGAGGGAGATAAACCCTTACCCAAATTGGTCAGAGCAAGAATGGTTGATTCTCCCTATACCCCGTTTCCTATGCTTTGTAATGCACAATTTTTGCGCGCAGGAATGAACTTTAAAGACTGTGTCTTCAATCCCAAGTTTCACAATCTAATCCAGATGGACCTTACTTTCAAGTATCAACGCTGCAAAGTCATGTGGAACTGGTTCGCGCAAGTGCTGCACAATTGTCCTAAGCTTCAAAGTCTTACCATTTACAAGAACCACACATGTGTAAATGAAGGCAATGAGCACTGGAAGGACCCACAGATTGTTCCGACATGTCTTTCAACACAACTTAGAACATTCACACTCAAATATTACAAAGGTTTGAAATGTGAGACCCAATTCGCTAAATATATTATGCAAAATTCAAAACTACTACAAAATATGACAATTCACACTACTCTACACATTGATATAAAGGATCCAATATTGGAAACTTTCTCTCTGTGTCCAAGGGGCTCTGCGACATGTAATCTTCGCTTTGACCTACAACCGGCCCAACATCGTTTTCAATTGTGGTCGTGA
Protein sequence

>MsG0580024321.01.T01

MSCDGKKKMEFSSESNSEVEKTTMESLPNDVRRRILSFLPTRDAAASSLLSKRWKPLWLSLAFFDFNDGYFPDFRKFSDFVTSVLSSPHSVQSLRLTCGFHPFVNSSFPDFHFFLNMVALKGVHELDLGLVTLTKLPYSFYGCKTLVTLKLHNVILILIDSSYVDFPLLKSLYLNDIKFGSQAIMFEFLCGCPNLEYLHARSLQFIGRDIPPQVEEGDKPLPKLVRARMVDSPYTPFPMLCNAQFLRAGMNFKDCVFNPKFHNLIQMDLTFKYQRCKVMWNWFAQVLHNCPKLQSLTIYKNHTCVNEGNEHWKDPQIVPTCLSTQLRTFTLKYYKGLKCETQFAKYIMQNSKLLQNMTIHTTLHIDIKDPILETFSLCPRGSATCNLRFDLQPAQHRFQLWS*