AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005010.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005010.01.T01 MTR_1g038710 64.859 461 147 7 1 451 1 456 0.0 528
MsG0180005010.01.T01 MTR_4g056040 60.510 471 147 6 11 446 1 467 0.0 528
MsG0180005010.01.T01 MTR_1g090883 71.745 361 98 2 1 361 1 357 4.71e-179 505
MsG0180005010.01.T01 MTR_4g056020 61.435 446 163 5 11 451 1 442 3.08e-178 506
MsG0180005010.01.T01 MTR_4g056030 60.987 446 165 5 11 451 1 442 3.96e-176 501
MsG0180005010.01.T01 MTR_4g055990 57.172 488 158 8 11 451 1 484 1.59e-167 481
MsG0180005010.01.T01 MTR_4g055990 56.729 483 158 8 11 446 1 479 1.34e-163 471
MsG0180005010.01.T01 MTR_4g055580 56.707 492 166 7 2 451 83 569 4.55e-163 473
MsG0180005010.01.T01 MTR_4g056070 57.370 441 140 6 11 407 1 437 2.64e-155 447
MsG0180005010.01.T01 MTR_1g090900 89.888 178 18 0 11 188 1 178 1.78e-110 324
MsG0180005010.01.T01 MTR_7g110920 52.925 359 107 6 111 446 1 320 5.22e-106 317
MsG0180005010.01.T01 MTR_4g093690 56.794 287 104 12 1 280 1 274 5.56e-81 251
MsG0180005010.01.T01 MTR_4g056020 63.699 146 48 2 311 451 1 146 2.21e-54 179
MsG0180005010.01.T01 MTR_4g056010 67.742 93 29 1 85 177 6 97 5.92e-32 117
MsG0180005010.01.T01 MTR_5g084070 28.774 424 269 12 15 431 7 404 1.74e-28 117
MsG0180005010.01.T01 MTR_1g090890 63.415 82 28 1 365 446 37 116 8.16e-27 104
MsG0180005010.01.T01 MTR_5g080710 30.000 420 261 13 17 426 29 425 8.80e-27 112
MsG0180005010.01.T01 MTR_8g445780 28.087 413 238 15 19 406 11 389 3.63e-25 107
MsG0180005010.01.T01 MTR_3g108560 30.318 409 211 15 18 421 17 356 1.74e-24 105
MsG0180005010.01.T01 MTR_8g014260 27.252 444 278 16 1 423 1 420 8.03e-24 103
MsG0180005010.01.T01 MTR_8g467800 29.587 436 254 17 3 410 2 412 4.32e-23 101
MsG0180005010.01.T01 MTR_7g007080 29.009 424 210 17 19 422 2 354 4.30e-22 98.2
MsG0180005010.01.T01 MTR_4g080590 26.118 425 266 15 20 422 22 420 1.02e-21 97.8
MsG0180005010.01.T01 MTR_1g041245 25.587 426 230 11 11 421 1 354 1.25e-21 96.7
MsG0180005010.01.T01 MTR_4g032730 26.517 445 260 15 21 421 15 436 1.13e-20 94.7
MsG0180005010.01.T01 MTR_3g023630 26.829 410 219 12 21 421 8 345 2.17e-20 92.8
MsG0180005010.01.T01 MTR_4g080590 28.142 366 217 13 20 363 22 363 3.11e-20 92.4
MsG0180005010.01.T01 MTR_1g085120 26.802 444 209 18 21 433 92 450 7.42e-20 92.0
MsG0180005010.01.T01 MTR_2g005990 25.942 451 221 16 21 434 6 380 1.11e-19 90.9
MsG0180005010.01.T01 MTR_1g085120 26.802 444 209 18 21 433 167 525 1.14e-19 92.0
MsG0180005010.01.T01 MTR_0492s0020 27.407 405 219 14 20 421 85 417 1.22e-19 91.3
MsG0180005010.01.T01 MTR_0543s0010 27.407 405 219 13 20 421 85 417 1.32e-19 91.3
MsG0180005010.01.T01 MTR_4g039440 26.764 411 223 17 21 421 34 376 1.96e-19 90.5
MsG0180005010.01.T01 MTR_8g468810 27.419 434 278 16 16 428 20 437 3.84e-19 90.1
MsG0180005010.01.T01 MTR_8g468840 27.400 427 266 17 20 421 13 420 4.90e-19 89.7
MsG0180005010.01.T01 MTR_8g062270 28.311 438 248 18 21 421 16 424 1.05e-18 88.6
MsG0180005010.01.T01 MTR_6g011460 26.812 414 216 18 21 421 46 385 2.92e-18 87.0
MsG0180005010.01.T01 MTR_7g056277 26.492 419 226 14 17 426 255 600 3.91e-18 87.4
MsG0180005010.01.T01 MTR_1g107385 26.374 455 228 15 15 434 26 408 1.34e-17 85.1
MsG0180005010.01.T01 MTR_3g108150 27.451 408 225 15 20 421 12 354 2.59e-17 84.0
MsG0180005010.01.T01 MTR_8g058970 26.304 460 282 14 1 421 1 442 3.59e-17 84.0
MsG0180005010.01.T01 MTR_2g007450 24.017 458 250 18 14 434 9 405 6.42e-17 82.8
MsG0180005010.01.T01 MTR_8g467800 29.805 359 206 15 3 342 2 333 8.47e-17 81.6
MsG0180005010.01.T01 MTR_1g053025 24.537 432 249 14 21 434 2 374 1.52e-16 81.6
MsG0180005010.01.T01 MTR_7g055943 25.197 381 201 13 21 388 40 349 1.78e-16 81.6
MsG0180005010.01.T01 MTR_7g056287 26.747 415 222 15 21 426 3 344 4.22e-16 80.1
MsG0180005010.01.T01 MTR_3g107160 23.923 418 244 12 14 421 3 356 4.26e-16 80.1
MsG0180005010.01.T01 MTR_3g107100 25.761 427 238 17 11 425 1 360 4.33e-16 80.5
MsG0180005010.01.T01 MTR_3g087260 26.998 463 240 17 19 426 10 429 6.19e-16 80.1
MsG0180005010.01.T01 MTR_5g039950 26.139 417 242 14 20 421 22 387 6.41e-16 79.7
MsG0180005010.01.T01 MTR_3g108560 30.682 352 170 15 18 364 17 299 7.81e-16 78.6
MsG0180005010.01.T01 MTR_2g083840 26.190 420 273 13 21 421 21 422 1.42e-15 79.0
MsG0180005010.01.T01 MTR_3g109982 27.451 459 246 18 16 416 8 437 1.85e-15 79.3
MsG0180005010.01.T01 MTR_7g088260 24.762 420 233 13 16 424 86 433 2.52e-15 78.2
MsG0180005010.01.T01 MTR_1g085120 27.807 374 156 18 21 363 179 469 3.54e-15 77.8
MsG0180005010.01.T01 MTR_4g050930 27.844 334 207 10 19 336 27 342 3.62e-15 77.4
MsG0180005010.01.T01 MTR_2g036470 23.973 438 242 17 14 431 7 373 4.75e-15 77.0
MsG0180005010.01.T01 MTR_4g050930 27.844 334 207 10 19 336 27 342 7.40e-15 77.0
MsG0180005010.01.T01 MTR_2g007500 25.735 408 201 14 14 398 7 335 9.12e-15 75.5
MsG0180005010.01.T01 MTR_7g032380 29.956 227 138 5 11 232 1 211 1.02e-14 75.9
MsG0180005010.01.T01 MTR_7g034115 35.979 189 108 6 21 205 11 190 1.26e-14 75.5
MsG0180005010.01.T01 MTR_3g099900 26.957 345 213 15 9 335 7 330 1.43e-14 75.5
MsG0180005010.01.T01 MTR_3g048290 26.047 430 277 15 17 421 19 432 2.10e-14 75.5
MsG0180005010.01.T01 MTR_6g022500 26.202 416 219 19 21 421 101 443 2.49e-14 75.1
MsG0180005010.01.T01 MTR_7g033945 32.768 177 104 4 11 177 1 172 4.85e-14 70.5
MsG0180005010.01.T01 MTR_7g023310 23.256 430 283 13 16 421 21 427 5.22e-14 74.3
MsG0180005010.01.T01 MTR_4g080773 26.037 434 270 15 21 421 19 434 6.70e-14 73.9
MsG0180005010.01.T01 MTR_7g098510 24.292 424 232 13 21 431 18 365 7.39e-14 73.2
MsG0180005010.01.T01 MTR_4g080773 26.037 434 270 15 21 421 19 434 7.62e-14 73.9
MsG0180005010.01.T01 MTR_4g130200 25.301 415 225 14 20 422 19 360 1.11e-13 72.8
MsG0180005010.01.T01 MTR_5g058100 25.362 414 224 13 21 421 9 350 1.62e-13 72.4
MsG0180005010.01.T01 MTR_4g045680 27.381 336 206 13 19 334 14 331 2.10e-13 72.0
MsG0180005010.01.T01 MTR_7g060470 25.581 430 241 17 21 432 3 371 2.48e-13 71.6
MsG0180005010.01.T01 MTR_6g022360 31.120 241 129 11 21 245 43 262 4.44e-13 71.2
MsG0180005010.01.T01 MTR_8g066650 25.223 337 218 11 18 338 77 395 4.53e-13 71.2
MsG0180005010.01.T01 MTR_7g115270 32.995 197 113 7 20 205 11 199 5.59e-13 70.9
MsG0180005010.01.T01 MTR_7g056430 27.187 423 211 16 14 426 2 337 6.16e-13 71.6
MsG0180005010.01.T01 MTR_7g098570 32.018 228 139 8 21 245 20 234 6.26e-13 70.9
MsG0180005010.01.T01 MTR_7g056420 27.187 423 211 16 14 426 2 337 7.24e-13 71.2
MsG0180005010.01.T01 MTR_2g047848 26.027 438 264 18 16 429 2 403 8.21e-13 70.5
MsG0180005010.01.T01 MTR_2g094750 27.062 388 231 16 14 360 83 459 1.12e-12 70.1
MsG0180005010.01.T01 MTR_8g085430 28.037 214 132 5 21 222 11 214 1.12e-12 69.3
MsG0180005010.01.T01 MTR_3g019240 27.606 355 216 13 1 336 9 341 1.42e-12 69.3
MsG0180005010.01.T01 MTR_8g469020 26.340 429 273 16 21 422 7 419 1.57e-12 69.7
MsG0180005010.01.T01 MTR_4g081030 27.410 332 206 12 20 337 16 326 1.99e-12 68.9
MsG0180005010.01.T01 MTR_7g017280 24.936 393 255 15 4 365 131 514 3.00e-12 68.9
MsG0180005010.01.T01 MTR_7g110910 70.000 50 13 1 1 50 148 195 3.32e-12 65.9
MsG0180005010.01.T01 MTR_4g024680 31.818 198 102 8 17 211 518 685 3.49e-12 69.3
MsG0180005010.01.T01 MTR_3g014590 25.602 332 228 7 11 334 1 321 3.74e-12 68.2
MsG0180005010.01.T01 MTR_7g056447 35.533 197 108 7 14 204 2 185 4.66e-12 67.0
MsG0180005010.01.T01 MTR_4g051480 25.770 357 230 11 1 336 5 347 7.38e-12 68.2
MsG0180005010.01.T01 MTR_4g092300 25.770 357 230 11 1 336 5 347 7.77e-12 68.2
MsG0180005010.01.T01 MTR_7g033915 33.333 153 90 3 11 153 1 151 7.85e-12 67.0
MsG0180005010.01.T01 MTR_8g014160 28.349 321 186 10 14 308 34 336 1.12e-11 66.6
MsG0180005010.01.T01 MTR_1g048340 24.781 343 215 11 14 349 9 315 2.28e-11 65.1
MsG0180005010.01.T01 MTR_6g022390 44.444 63 35 0 21 83 5 67 2.31e-11 62.0
MsG0180005010.01.T01 MTR_4g024780 29.787 188 122 6 8 188 131 315 3.93e-11 65.5
MsG0180005010.01.T01 MTR_7g033990 29.508 244 131 9 11 232 1 225 4.46e-11 65.1
MsG0180005010.01.T01 MTR_3g014550 24.699 332 232 6 11 334 1 322 5.83e-11 64.3
MsG0180005010.01.T01 MTR_8g062310 31.068 206 118 10 7 205 11 199 6.75e-11 64.3
MsG0180005010.01.T01 MTR_6g025270 24.309 362 235 10 16 356 29 372 6.96e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005010.01.T01 AT4G26340 28.910 422 264 16 21 432 2 397 1.97e-30 122
MsG0180005010.01.T01 AT4G10400 29.356 419 236 14 21 421 2 378 6.42e-28 115
MsG0180005010.01.T01 AT4G10400 29.356 419 236 14 21 421 2 378 6.42e-28 115
MsG0180005010.01.T01 AT4G10400 29.356 419 236 14 21 421 2 378 6.42e-28 115
MsG0180005010.01.T01 AT4G14103 28.841 371 217 12 20 363 7 357 1.06e-27 114
MsG0180005010.01.T01 AT4G14103 28.841 371 217 12 20 363 7 357 1.06e-27 114
MsG0180005010.01.T01 AT4G14103 29.111 371 216 12 20 363 7 357 1.59e-27 114
MsG0180005010.01.T01 AT5G56400 27.739 429 277 11 3 421 15 420 5.29e-27 113
MsG0180005010.01.T01 AT2G04230 28.355 462 267 16 20 450 12 440 6.15e-27 112
MsG0180005010.01.T01 AT5G56370 29.508 427 252 15 21 434 2 392 7.63e-27 112
MsG0180005010.01.T01 AT5G56370 29.508 427 252 15 21 434 2 392 7.63e-27 112
MsG0180005010.01.T01 AT3G59230 28.035 453 256 18 20 422 11 443 1.41e-26 112
MsG0180005010.01.T01 AT5G56380 27.828 442 266 15 21 434 2 418 7.31e-26 109
MsG0180005010.01.T01 AT5G56380 27.828 442 266 15 21 434 2 418 7.31e-26 109
MsG0180005010.01.T01 AT4G00315 28.345 441 252 19 21 426 2 413 8.69e-26 109
MsG0180005010.01.T01 AT4G14096 26.728 434 264 16 20 422 7 417 2.49e-25 108
MsG0180005010.01.T01 AT4G14096 26.728 434 264 16 20 422 7 417 2.49e-25 108
MsG0180005010.01.T01 AT5G60610 28.162 419 249 16 21 421 2 386 3.97e-25 107
MsG0180005010.01.T01 AT5G60610 28.162 419 249 16 21 421 2 386 3.97e-25 107
MsG0180005010.01.T01 AT1G55660 27.130 446 251 21 21 426 53 464 5.39e-25 107
MsG0180005010.01.T01 AT4G26350 27.107 439 259 18 21 432 2 406 6.73e-25 106
MsG0180005010.01.T01 AT1G51370 28.146 437 261 15 4 421 2 404 2.36e-24 105
MsG0180005010.01.T01 AT2G26860 28.640 419 259 15 20 421 1 396 1.37e-23 102
MsG0180005010.01.T01 AT2G26860 28.640 419 259 15 20 421 1 396 1.37e-23 102
MsG0180005010.01.T01 AT3G59190 28.533 375 220 10 20 361 11 370 7.92e-23 100
MsG0180005010.01.T01 AT4G09920 32.143 308 164 10 20 309 1 281 9.81e-23 98.2
MsG0180005010.01.T01 AT4G09920 32.143 308 164 10 20 309 1 281 9.81e-23 98.2
MsG0180005010.01.T01 AT4G09920 32.143 308 164 10 20 309 1 281 9.81e-23 98.2
MsG0180005010.01.T01 AT3G59190 28.382 377 222 10 20 363 11 372 1.64e-22 100
MsG0180005010.01.T01 AT3G59210 28.307 378 223 11 17 364 3 362 2.35e-22 99.8
MsG0180005010.01.T01 AT3G59210 28.307 378 223 11 17 364 3 362 2.35e-22 99.8
MsG0180005010.01.T01 AT3G59210 28.307 378 223 11 17 364 3 362 2.35e-22 99.8
MsG0180005010.01.T01 AT3G59210 28.307 378 223 11 17 364 3 362 2.35e-22 99.8
MsG0180005010.01.T01 AT3G59210 28.307 378 223 11 17 364 3 362 2.35e-22 99.8
MsG0180005010.01.T01 AT5G56370 30.226 354 201 15 20 363 1 318 2.91e-22 97.4
MsG0180005010.01.T01 AT4G09920 32.039 309 157 10 21 307 2 279 5.70e-22 96.7
MsG0180005010.01.T01 AT4G09920 32.039 309 157 10 21 307 2 279 5.70e-22 96.7
MsG0180005010.01.T01 AT5G41840 26.615 387 227 10 21 363 14 387 7.83e-22 98.6
MsG0180005010.01.T01 AT4G00320 26.471 408 247 12 17 388 9 399 1.37e-21 97.8
MsG0180005010.01.T01 AT5G62970 26.767 467 268 19 21 443 2 438 1.47e-21 97.1
MsG0180005010.01.T01 AT4G00160 27.163 416 267 10 20 423 15 406 2.49e-21 96.7
MsG0180005010.01.T01 AT3G26930 28.266 421 260 15 12 419 12 403 3.88e-21 95.9
MsG0180005010.01.T01 AT5G18770 26.667 465 297 16 14 451 17 464 5.81e-21 95.5
MsG0180005010.01.T01 AT5G56420 26.230 427 248 13 20 421 5 389 9.51e-21 94.4
MsG0180005010.01.T01 AT5G56420 26.230 427 248 13 20 421 5 389 9.51e-21 94.4
MsG0180005010.01.T01 AT5G56420 26.230 427 248 13 20 421 5 389 9.51e-21 94.4
MsG0180005010.01.T01 AT5G56440 27.869 427 251 16 21 421 2 397 1.86e-20 93.6
MsG0180005010.01.T01 AT3G59200 27.451 408 231 16 20 385 6 390 1.93e-20 94.4
MsG0180005010.01.T01 AT5G56410 26.304 460 275 19 21 443 2 434 2.76e-20 93.6
MsG0180005010.01.T01 AT5G53840 28.738 428 260 16 9 418 3 403 3.67e-20 92.8
MsG0180005010.01.T01 AT3G52680 27.689 437 248 13 20 431 20 413 4.29e-20 92.8
MsG0180005010.01.T01 AT3G59200 28.010 382 212 15 20 361 6 364 4.60e-20 91.7
MsG0180005010.01.T01 AT5G38590 27.014 422 251 15 21 423 2 385 4.93e-20 92.4
MsG0180005010.01.T01 AT3G59160 25.061 407 232 15 20 370 12 401 5.14e-20 92.8
MsG0180005010.01.T01 AT5G18780 26.812 414 270 15 20 418 10 405 7.47e-20 92.0
MsG0180005010.01.T01 AT5G18780 26.812 414 270 15 20 418 10 405 7.47e-20 92.0
MsG0180005010.01.T01 AT1G51370 27.628 409 244 14 4 394 2 376 7.82e-20 91.7
MsG0180005010.01.T01 AT2G42720 28.689 366 220 13 21 363 2 349 1.24e-19 91.3
MsG0180005010.01.T01 AT5G53635 28.842 423 250 18 23 418 2 400 1.52e-19 90.9
MsG0180005010.01.T01 AT5G44950 27.494 451 253 23 20 431 3 418 1.82e-19 90.9
MsG0180005010.01.T01 AT1G78760 26.846 447 264 18 19 436 14 426 1.89e-19 90.9
MsG0180005010.01.T01 AT3G49150 24.138 435 288 13 19 422 14 437 2.01e-19 90.9
MsG0180005010.01.T01 AT3G49030 26.366 421 263 14 19 423 19 408 2.62e-19 90.5
MsG0180005010.01.T01 AT1G51370 28.797 316 186 9 4 308 2 289 3.02e-19 89.0
MsG0180005010.01.T01 AT3G50710 27.169 438 256 18 21 431 2 403 3.15e-19 90.1
MsG0180005010.01.T01 AT3G58900 26.562 448 260 16 21 423 2 425 3.81e-19 90.1
MsG0180005010.01.T01 AT3G44060 27.053 414 256 16 26 417 4 393 4.23e-19 89.7
MsG0180005010.01.T01 AT4G13965 26.591 440 240 19 21 430 10 396 4.40e-19 89.7
MsG0180005010.01.T01 AT1G58310 26.966 445 250 16 18 402 5 434 5.02e-19 89.7
MsG0180005010.01.T01 AT1G55660 31.746 252 142 11 20 257 52 287 6.07e-19 88.6
MsG0180005010.01.T01 AT5G41830 26.536 407 246 14 17 388 9 397 1.48e-18 88.6
MsG0180005010.01.T01 AT4G13960 25.885 452 268 17 21 432 2 426 1.54e-18 88.2
MsG0180005010.01.T01 AT4G13960 25.885 452 268 17 21 432 2 426 1.54e-18 88.2
MsG0180005010.01.T01 AT1G05080 29.070 430 244 14 20 421 12 408 1.63e-18 87.8
MsG0180005010.01.T01 AT2G29930 29.863 365 210 13 20 363 11 350 1.93e-18 87.8
MsG0180005010.01.T01 AT2G29930 29.863 365 210 13 20 363 11 350 1.93e-18 87.8
MsG0180005010.01.T01 AT3G58860 26.975 367 229 10 18 366 4 349 2.29e-18 87.8
MsG0180005010.01.T01 AT1G13780 27.083 432 259 17 21 418 10 419 2.35e-18 87.4
MsG0180005010.01.T01 AT3G58960 25.762 361 236 10 21 360 2 351 7.00e-18 86.3
MsG0180005010.01.T01 AT3G26930 27.202 386 239 14 47 419 2 358 1.53e-17 84.7
MsG0180005010.01.T01 AT3G58880 24.783 460 278 12 21 439 3 435 2.36e-17 84.3
MsG0180005010.01.T01 AT5G38570 25.000 416 245 10 21 432 2 354 2.87e-17 83.6
MsG0180005010.01.T01 AT5G56810 27.295 414 262 13 21 421 15 402 3.43e-17 84.0
MsG0180005010.01.T01 AT1G66310 27.193 456 283 15 9 442 7 435 4.07e-17 83.6
MsG0180005010.01.T01 AT5G44490 27.778 468 263 22 1 432 1 429 4.57e-17 83.6
MsG0180005010.01.T01 AT5G44490 27.778 468 263 22 1 432 1 429 4.96e-17 83.6
MsG0180005010.01.T01 AT4G10420 29.412 323 184 14 111 421 1 291 4.99e-17 82.4
MsG0180005010.01.T01 AT4G22280 29.248 359 229 10 20 371 1 341 8.22e-17 82.8
MsG0180005010.01.T01 AT3G59250 25.285 439 260 14 20 436 6 398 9.78e-17 82.4
MsG0180005010.01.T01 AT3G03030 25.132 378 234 10 21 363 2 365 1.12e-16 82.4
MsG0180005010.01.T01 AT4G22280 30.199 351 216 12 20 361 1 331 1.20e-16 81.3
MsG0180005010.01.T01 AT5G22670 25.986 431 272 15 11 418 1 407 1.62e-16 82.0
MsG0180005010.01.T01 AT2G26030 25.943 424 266 15 21 418 4 405 1.83e-16 81.6
MsG0180005010.01.T01 AT2G26030 25.943 424 266 15 21 418 4 405 1.83e-16 81.6
MsG0180005010.01.T01 AT5G22700 27.907 430 250 17 21 426 6 399 1.96e-16 81.6
MsG0180005010.01.T01 AT5G22700 27.907 430 250 17 21 426 6 399 1.96e-16 81.6
MsG0180005010.01.T01 AT5G22700 27.907 430 250 17 21 426 6 399 1.96e-16 81.6
MsG0180005010.01.T01 AT5G22700 27.907 430 250 17 21 426 6 399 1.96e-16 81.6
MsG0180005010.01.T01 AT5G22730 25.708 424 271 12 20 418 27 431 3.20e-16 81.3
MsG0180005010.01.T01 AT5G22730 25.708 424 271 12 20 418 27 431 3.20e-16 81.3
MsG0180005010.01.T01 AT5G22700 27.907 430 250 17 21 426 43 436 3.33e-16 81.3
MsG0180005010.01.T01 AT5G22610 28.665 457 264 18 13 443 10 430 4.33e-16 80.9
MsG0180005010.01.T01 AT3G51530 26.517 445 265 17 5 431 21 421 5.18e-16 80.5
MsG0180005010.01.T01 AT3G03040 26.649 379 222 11 21 363 2 360 5.47e-16 80.5
MsG0180005010.01.T01 AT5G18770 26.997 363 232 11 14 358 17 364 6.39e-16 79.7
MsG0180005010.01.T01 AT3G58920 26.455 378 228 12 21 361 2 366 7.78e-16 80.1
MsG0180005010.01.T01 AT3G59240 26.230 366 231 12 20 363 7 355 7.89e-16 80.1
MsG0180005010.01.T01 AT5G22610 27.872 470 281 18 13 443 10 460 7.99e-16 80.1
MsG0180005010.01.T01 AT2G42730 27.989 368 215 15 20 358 4 350 9.99e-16 79.7
MsG0180005010.01.T01 AT3G62430 27.654 358 229 12 21 363 2 344 1.06e-15 79.3
MsG0180005010.01.T01 AT5G27750 24.943 437 269 14 21 418 5 421 1.36e-15 79.3
MsG0180005010.01.T01 AT5G18780 26.761 355 229 13 20 360 10 347 3.82e-15 77.4
MsG0180005010.01.T01 AT5G18780 26.761 355 229 13 20 360 10 347 3.82e-15 77.4
MsG0180005010.01.T01 AT5G50270 25.118 422 281 14 21 429 2 401 3.87e-15 77.4
MsG0180005010.01.T01 AT1G06630 28.492 358 224 14 20 361 11 352 8.85e-15 75.9
MsG0180005010.01.T01 AT1G06630 28.492 358 224 14 20 361 11 352 8.85e-15 75.9
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 20 363 9.84e-15 76.3
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 11 354 9.93e-15 76.3
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 11 354 9.93e-15 76.3
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 11 354 9.93e-15 76.3
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 11 354 9.93e-15 76.3
MsG0180005010.01.T01 AT1G69630 25.000 448 287 14 14 436 11 434 1.08e-14 76.3
MsG0180005010.01.T01 AT1G06630 28.333 360 226 14 20 363 11 354 1.09e-14 76.3
MsG0180005010.01.T01 AT2G26030 25.701 428 267 16 21 418 4 410 1.12e-14 76.3
MsG0180005010.01.T01 AT5G25860 25.666 413 253 16 20 403 11 398 1.53e-14 75.9
MsG0180005010.01.T01 AT5G38392 33.981 206 111 6 21 210 2 198 2.12e-14 72.8
MsG0180005010.01.T01 AT3G58900 27.356 329 186 11 21 312 2 314 2.15e-14 74.3
MsG0180005010.01.T01 AT1G32375 25.290 431 262 17 21 427 2 396 2.24e-14 75.1
MsG0180005010.01.T01 AT1G32375 25.290 431 262 17 21 427 2 396 2.24e-14 75.1
MsG0180005010.01.T01 AT3G58900 27.628 333 186 12 21 314 2 318 2.47e-14 74.3
MsG0180005010.01.T01 AT3G58900 27.628 333 186 12 21 314 2 318 2.47e-14 74.3
MsG0180005010.01.T01 AT4G15060 29.167 312 176 16 16 304 167 456 2.60e-14 75.5
MsG0180005010.01.T01 AT1G66300 25.708 459 278 17 15 442 23 449 2.91e-14 75.1
MsG0180005010.01.T01 AT4G15060 28.387 310 177 15 18 304 23 310 3.87e-14 74.3
MsG0180005010.01.T01 AT5G22660 26.303 422 272 15 20 421 12 414 4.31e-14 74.3
MsG0180005010.01.T01 AT5G56690 26.555 418 266 15 23 421 4 399 5.26e-14 73.9
MsG0180005010.01.T01 AT3G52680 27.945 365 203 10 20 363 20 345 5.31e-14 73.6
MsG0180005010.01.T01 AT3G58930 23.542 463 276 15 21 429 2 440 6.20e-14 73.9
MsG0180005010.01.T01 AT3G58930 23.542 463 276 15 21 429 2 440 6.20e-14 73.9
MsG0180005010.01.T01 AT3G58930 23.542 463 276 15 21 429 2 440 6.20e-14 73.9
MsG0180005010.01.T01 AT3G49030 26.506 415 244 16 19 423 19 382 7.58e-14 73.6
MsG0180005010.01.T01 AT3G54910 27.778 342 212 11 87 421 29 342 8.46e-14 73.2
MsG0180005010.01.T01 AT3G54910 27.778 342 212 11 87 421 29 342 8.46e-14 73.2
MsG0180005010.01.T01 AT3G54910 27.778 342 212 11 87 421 29 342 8.46e-14 73.2
MsG0180005010.01.T01 AT1G16930 24.943 437 273 15 15 426 9 415 9.96e-14 73.2
MsG0180005010.01.T01 AT1G16930 24.943 437 273 15 15 426 9 415 9.96e-14 73.2
MsG0180005010.01.T01 AT1G16930 24.943 437 273 15 15 426 9 415 9.96e-14 73.2
MsG0180005010.01.T01 AT3G56780 24.215 446 278 12 23 422 9 440 1.06e-13 73.6
MsG0180005010.01.T01 AT3G03030 36.364 143 80 3 21 153 2 143 1.84e-13 71.6
MsG0180005010.01.T01 AT1G13780 28.615 325 177 14 21 309 10 315 2.03e-13 71.6
MsG0180005010.01.T01 AT3G59150 26.452 465 271 19 3 422 2 440 2.70e-13 72.0
MsG0180005010.01.T01 AT3G59000 24.045 445 276 14 21 423 2 426 2.76e-13 72.0
MsG0180005010.01.T01 AT5G38590 28.846 312 177 13 20 315 1 283 5.92e-13 69.7
MsG0180005010.01.T01 AT3G44810 24.931 361 233 11 26 364 12 356 6.31e-13 70.9
MsG0180005010.01.T01 AT1G66290 27.378 431 249 21 16 418 24 418 7.80e-13 70.5
MsG0180005010.01.T01 AT1G52650 25.571 438 266 17 21 421 2 416 1.15e-12 70.1
MsG0180005010.01.T01 AT5G27750 25.197 381 231 11 21 364 5 368 1.59e-12 69.3
MsG0180005010.01.T01 AT5G56810 29.150 247 152 8 21 257 15 248 2.00e-12 68.2
MsG0180005010.01.T01 AT5G22700 33.511 188 110 5 21 205 43 218 2.06e-12 69.3
MsG0180005010.01.T01 AT5G22730 26.230 366 228 11 20 360 27 375 2.47e-12 68.6
MsG0180005010.01.T01 AT3G42770 25.581 430 249 17 26 423 4 394 2.68e-12 69.3
MsG0180005010.01.T01 AT1G55030 24.878 410 266 15 21 419 19 397 3.33e-12 68.6
MsG0180005010.01.T01 AT3G26922 27.801 241 157 7 20 255 13 241 3.54e-12 67.4
MsG0180005010.01.T01 AT3G26922 27.801 241 157 7 20 255 13 241 3.54e-12 67.4
MsG0180005010.01.T01 AT1G55030 24.878 410 266 15 21 419 9 387 3.78e-12 68.2
MsG0180005010.01.T01 AT3G58940 26.158 367 225 13 21 366 2 343 5.11e-12 68.6
MsG0180005010.01.T01 AT3G58940 26.158 367 225 13 21 366 2 343 5.11e-12 68.6
MsG0180005010.01.T01 AT4G10410 28.313 332 151 13 35 359 1 252 6.48e-12 66.2
MsG0180005010.01.T01 AT5G56560 25.517 435 259 16 18 428 2 395 8.78e-12 67.0
MsG0180005010.01.T01 AT3G60040 25.604 414 251 14 20 403 12 398 1.77e-11 66.6
MsG0180005010.01.T01 AT5G38390 24.017 458 261 20 21 431 2 419 1.85e-11 66.2
MsG0180005010.01.T01 AT3G60040 25.604 414 251 14 20 403 231 617 2.26e-11 66.6
MsG0180005010.01.T01 AT3G60040 25.604 414 251 14 20 403 232 618 2.28e-11 66.6
MsG0180005010.01.T01 AT3G60040 25.604 414 251 14 20 403 231 617 2.35e-11 66.2
MsG0180005010.01.T01 AT3G49020 25.917 436 276 16 19 440 20 422 2.36e-11 65.9
MsG0180005010.01.T01 AT3G60040 25.604 414 251 14 20 403 229 615 2.37e-11 66.2
MsG0180005010.01.T01 AT3G49480 24.711 433 274 15 20 427 11 416 3.50e-11 65.5
MsG0180005010.01.T01 AT2G29910 25.886 367 216 15 20 349 4 351 4.26e-11 64.7
MsG0180005010.01.T01 AT2G29910 25.886 367 216 15 20 349 4 351 4.26e-11 64.7
MsG0180005010.01.T01 AT2G29910 25.886 367 216 15 20 349 4 351 4.26e-11 64.7
MsG0180005010.01.T01 AT2G29910 25.886 367 216 15 20 349 4 351 4.26e-11 64.7
MsG0180005010.01.T01 AT3G49040 26.623 308 184 12 13 304 9 290 4.32e-11 64.3
MsG0180005010.01.T01 AT3G58980 26.415 371 224 14 21 361 2 353 6.38e-11 65.1
MsG0180005010.01.T01 AT2G29910 25.886 367 216 15 20 349 28 375 6.86e-11 64.3
MsG0180005010.01.T01 AT3G58930 23.333 450 259 16 21 429 2 406 7.83e-11 64.3
MsG0180005010.01.T01 AT3G58930 23.333 450 259 16 21 429 2 406 7.83e-11 64.3

Find 88 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTGGTTTGTTTGAATT+TGG 0.121921 1:-85636443 None:intergenic
CTCATTACATTTGAATTTAG+AGG 0.218662 1:+85636335 MsG0180005010.01.T01:CDS
ACAAATCCTCCATTCTAGTA+TGG 0.245317 1:+85636489 MsG0180005010.01.T01:CDS
TAATCGGTCCTGCTCTTTAT+CGG 0.276903 1:-85634778 None:intergenic
TCACAATTTATCATCTTTAT+CGG 0.278854 1:+85635786 MsG0180005010.01.T01:CDS
CAAGTGACGGGGCATTAATT+TGG 0.287533 1:-85635460 None:intergenic
ATGGCAAGATGCTTAAGTTT+TGG 0.290006 1:-85635865 None:intergenic
TTGAGCAATTTATAACATAT+CGG 0.323075 1:-85636391 None:intergenic
TATTGTGTTTAATTCTATCT+TGG 0.324989 1:+85635265 MsG0180005010.01.T01:CDS
TGAAAGACATGTTGGAGTTT+CGG 0.342768 1:-85636306 None:intergenic
AAAGTCAAGGTTGGGGATCT+TGG 0.348543 1:-85634904 None:intergenic
GCTTGTGGTCTTAAAATTGC+GGG 0.361424 1:+85635169 MsG0180005010.01.T01:CDS
GGAAAGCCTAAGGGGCAATA+AGG 0.368330 1:-85635135 None:intergenic
GGTAATTCAAAGTCAAGGTT+GGG 0.380669 1:-85634912 None:intergenic
ATATACAGATTGGATTGCTT+TGG 0.388000 1:-85634958 None:intergenic
TTTACATGACTGCATGAAAC+AGG 0.390447 1:+85635352 MsG0180005010.01.T01:CDS
CGTCTGAAAGATCGCTTAAT+CGG 0.392098 1:-85634794 None:intergenic
AAATATCTGAAAATTGTTGT+TGG 0.393636 1:+85635812 MsG0180005010.01.T01:CDS
TCGAGTAAGCTTCTTTCTAC+TGG 0.410299 1:-85636458 None:intergenic
ATTTCTTTATTTCCACGTCT+TGG 0.417975 1:+85635416 MsG0180005010.01.T01:CDS
AAGAACTTGAATTCGATTGT+TGG 0.421294 1:+85635096 MsG0180005010.01.T01:CDS
GACCACAAGCGACTTAGAAA+TGG 0.423352 1:-85635156 None:intergenic
ACCATATGATATGCACTTGT+GGG 0.445487 1:+85635046 MsG0180005010.01.T01:CDS
TAGAATTAAACACAATAAGT+TGG 0.445919 1:-85635259 None:intergenic
AAGAGTAGCTCGATCAAGAT+TGG 0.446848 1:-85635543 None:intergenic
TTTATGCAGTTTCTAAGCAT+GGG 0.464461 1:+85635730 MsG0180005010.01.T01:intron
ACTTAAGCATCTTGCCATTG+AGG 0.470976 1:+85635870 MsG0180005010.01.T01:CDS
TTGCTCAAGTAATTTGAAGA+AGG 0.471257 1:+85636406 MsG0180005010.01.T01:CDS
TGAATTCGATTGTTGGTCCA+TGG 0.474053 1:+85635103 MsG0180005010.01.T01:CDS
TCTTCGCATTAGTAATCATC+CGG 0.478281 1:+85635562 MsG0180005010.01.T01:CDS
TGAGCAATTTATAACATATC+GGG 0.479615 1:-85636390 None:intergenic
CTTTGAATTACCAATGACTA+CGG 0.481951 1:+85634923 MsG0180005010.01.T01:CDS
ACCCACAAGTGCATATCATA+TGG 0.486209 1:-85635047 None:intergenic
GTATACAAACTGTTCAAATC+CGG 0.486513 1:-85635581 None:intergenic
CGCTTGTGGTCTTAAAATTG+CGG 0.490842 1:+85635168 MsG0180005010.01.T01:CDS
GGAGAGCTGCATATACAGAT+TGG 0.504410 1:-85634968 None:intergenic
TCAGAAGAATAATTAAGTCT+TGG 0.507877 1:-85635203 None:intergenic
AGCCTAAGGGGCAATAAGGT+TGG 0.508182 1:-85635131 None:intergenic
TGGTAATTCAAAGTCAAGGT+TGG 0.508833 1:-85634913 None:intergenic
TCTTTATTTCCACGTCTTGG+TGG 0.512827 1:+85635419 MsG0180005010.01.T01:CDS
ACTTAGAAATGGAAAGCCTA+AGG 0.512993 1:-85635145 None:intergenic
TTTGCAGAACGTCAAGTGAC+GGG 0.513099 1:-85635472 None:intergenic
TTCCATTTCTAAGTCGCTTG+TGG 0.515162 1:+85635154 MsG0180005010.01.T01:CDS
GACATAGGATCCGTAGTCAT+TGG 0.517402 1:-85634933 None:intergenic
CAAATCCTCCATTCTAGTAT+GGG 0.523811 1:+85636490 MsG0180005010.01.T01:CDS
TCAAAACGTACAAACTGAGT+TGG 0.523905 1:+85636361 MsG0180005010.01.T01:CDS
ATCTCGTTGTCCACATCTTG+AGG 0.524833 1:+85635322 MsG0180005010.01.T01:CDS
AGAGGTTGAAAACACAGGTT+GGG 0.525676 1:+85636274 MsG0180005010.01.T01:CDS
AATTTGGAGTGGACAAACAT+TGG 0.530609 1:-85635444 None:intergenic
GTTGAAAACACAGGTTGGGT+GGG 0.532925 1:+85636278 MsG0180005010.01.T01:CDS
AATATTCATACACACCTCAA+TGG 0.534611 1:-85635884 None:intergenic
GGTTGAAAACACAGGTTGGG+TGG 0.534898 1:+85636277 MsG0180005010.01.T01:CDS
CCAGTGTTCTATCTACAAGA+TGG 0.537999 1:+85634868 MsG0180005010.01.T01:CDS
CTCTGAATCCGATAAAGAGC+AGG 0.540909 1:+85634770 MsG0180005010.01.T01:CDS
CAATAAGGTTGGTTTCTCCA+TGG 0.541074 1:-85635120 None:intergenic
AACCAACCTTATTGCCCCTT+AGG 0.541824 1:+85635129 MsG0180005010.01.T01:CDS
TGGATTGCTTTGGACGACAT+AGG 0.543112 1:-85634948 None:intergenic
ACTTCATACCCATACTAGAA+TGG 0.545060 1:-85636498 None:intergenic
TTGAAAACACAGGTTGGGTG+GGG 0.553467 1:+85636279 MsG0180005010.01.T01:CDS
CAGTGTTCTATCTACAAGAT+GGG 0.555298 1:+85634869 MsG0180005010.01.T01:CDS
ATTCAAGTTCTTGAACCTTG+AGG 0.556422 1:-85635085 None:intergenic
CTTAGAAATGGAAAGCCTAA+GGG 0.556919 1:-85635144 None:intergenic
CACCATATGATATGCACTTG+TGG 0.561872 1:+85635045 MsG0180005010.01.T01:CDS
TTATGCAGTTTCTAAGCATG+GGG 0.573192 1:+85635731 MsG0180005010.01.T01:intron
TTCAAAAGCACTAGACCTCA+AGG 0.574224 1:+85635070 MsG0180005010.01.T01:CDS
AAGAGGTTGAAAACACAGGT+TGG 0.577723 1:+85636273 MsG0180005010.01.T01:CDS
GTAATTCAAAGTCAAGGTTG+GGG 0.578498 1:-85634911 None:intergenic
GACGGGGCATTAATTTGGAG+TGG 0.584321 1:-85635455 None:intergenic
ATTTGCAGAACGTCAAGTGA+CGG 0.592314 1:-85635473 None:intergenic
AGACATGTTGGAGTTTCGGA+TGG 0.596785 1:-85636302 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.601943 1:-85635236 None:intergenic
TGTGAAAAGTGAGAAGATGT+AGG 0.614072 1:-85635768 None:intergenic
GAATAATTAAGTCTTGGATG+AGG 0.615546 1:-85635197 None:intergenic
GTAGAAAGAAGCTTACTCGA+GGG 0.619367 1:+85636461 MsG0180005010.01.T01:CDS
CTAAGTCTCTATAGTGACGA+TGG 0.622950 1:+85635017 MsG0180005010.01.T01:CDS
TCATTGGTAATTCAAAGTCA+AGG 0.634424 1:-85634917 None:intergenic
ACCGAAGAGGTTGAAAACAC+AGG 0.639338 1:+85636269 MsG0180005010.01.T01:CDS
CTTGTGGTCTTAAAATTGCG+GGG 0.639914 1:+85635170 MsG0180005010.01.T01:CDS
ACATTGGAACCACCAAGACG+TGG 0.643756 1:-85635428 None:intergenic
TTAGAAATGGAAAGCCTAAG+GGG 0.656773 1:-85635143 None:intergenic
TTGCAGAACGTCAAGTGACG+GGG 0.657565 1:-85635471 None:intergenic
TAGAAAGAAGCTTACTCGAG+GGG 0.661193 1:+85636462 MsG0180005010.01.T01:CDS
AGTAGAAAGAAGCTTACTCG+AGG 0.666155 1:+85636460 MsG0180005010.01.T01:CDS
TCATACCCATACTAGAATGG+AGG 0.667044 1:-85636495 None:intergenic
CAACAAGAAACCGAAAACAA+TGG 0.674703 1:+85634743 MsG0180005010.01.T01:CDS
CCATCTTGTAGATAGAACAC+TGG 0.676162 1:-85634868 None:intergenic
GTGGTCTTAAAATTGCGGGG+CGG 0.702393 1:+85635173 MsG0180005010.01.T01:CDS
TATGCAGTTTCTAAGCATGG+GGG 0.711635 1:+85635732 MsG0180005010.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATTATTTTTTTAT+CGG - Chr1:85636034-85636053 None:intergenic 0.0%
!! TAATGAAAAGTTATAACAAA+TGG + Chr1:85636070-85636089 MsG0180005010.01.T01:intron 15.0%
!! TGATCAAAATAAAAATTTAG+TGG - Chr1:85637773-85637792 None:intergenic 15.0%
!!! ACACGAATTTTTATAAATTT+AGG - Chr1:85637931-85637950 None:intergenic 15.0%
!!! TATTATTCAATATTTGTTAC+AGG + Chr1:85638043-85638062 MsG0180005010.01.T01:intron 15.0%
!!! TGCACAATATTTTTTAAAAA+TGG + Chr1:85635919-85635938 MsG0180005010.01.T01:intron 15.0%
!! AAAAATTTAGTAGATGTGTA+TGG + Chr1:85637590-85637609 MsG0180005010.01.T01:intron 20.0%
!! AAATATCTGAAAATTGTTGT+TGG + Chr1:85635812-85635831 MsG0180005010.01.T01:CDS 20.0%
!! ATTATCAGTTAGTTGTAATA+AGG + Chr1:85636102-85636121 MsG0180005010.01.T01:intron 20.0%
!! CAAAATAAAAATTTAGTGGT+GGG - Chr1:85637769-85637788 None:intergenic 20.0%
!! GTTCTAATAACCATAATATT+TGG + Chr1:85636210-85636229 MsG0180005010.01.T01:intron 20.0%
!! TAACAAGTTACAACTAAAAA+CGG + Chr1:85636764-85636783 MsG0180005010.01.T01:intron 20.0%
!! TAGAATTAAACACAATAAGT+TGG - Chr1:85635262-85635281 None:intergenic 20.0%
!! TATTGTGTTTAATTCTATCT+TGG + Chr1:85635265-85635284 MsG0180005010.01.T01:CDS 20.0%
!! TCAAAATAAAAATTTAGTGG+TGG - Chr1:85637770-85637789 None:intergenic 20.0%
!! TCACAATTTATCATCTTTAT+CGG + Chr1:85635786-85635805 MsG0180005010.01.T01:CDS 20.0%
!! TTAAACGATACCAAATATTA+TGG - Chr1:85636223-85636242 None:intergenic 20.0%
!! TTGAGCAATTTATAACATAT+CGG - Chr1:85636394-85636413 None:intergenic 20.0%
!!! ACTCTTTAATCAAATTTTGT+GGG - Chr1:85636740-85636759 None:intergenic 20.0%
!!! ACTTAGTTTTCTTAAGTTTT+CGG - Chr1:85635003-85635022 None:intergenic 20.0%
!!! ATATTTTATCGGATACATAT+AGG + Chr1:85637476-85637495 MsG0180005010.01.T01:intron 20.0%
!!! ATTTTAGAAACATACATCTT+AGG - Chr1:85636945-85636964 None:intergenic 20.0%
!!! TACTCTTTAATCAAATTTTG+TGG - Chr1:85636741-85636760 None:intergenic 20.0%
!!! TATAAATTTAGGATACGATA+CGG - Chr1:85637920-85637939 None:intergenic 20.0%
!!! TATCGGATATCAATATTTTA+CGG + Chr1:85637396-85637415 MsG0180005010.01.T01:intron 20.0%
!!! TTTTAGAAACATACATCTTA+GGG - Chr1:85636944-85636963 None:intergenic 20.0%
! AAAAAAAATTCCTCAAGATG+TGG - Chr1:85635335-85635354 None:intergenic 25.0%
! AGTTAATATATGGAGCAATA+GGG - Chr1:85636645-85636664 None:intergenic 25.0%
! CACTAAATTTATACTTCTTG+TGG + Chr1:85637656-85637675 MsG0180005010.01.T01:intron 25.0%
! CTCATTACATTTGAATTTAG+AGG + Chr1:85636335-85636354 MsG0180005010.01.T01:CDS 25.0%
! GTGCATTTAATATTCATGTT+AGG + Chr1:85636124-85636143 MsG0180005010.01.T01:intron 25.0%
! TAAGTATCTTTGTGTATCTA+TGG - Chr1:85637507-85637526 None:intergenic 25.0%
! TCAGAAGAATAATTAAGTCT+TGG - Chr1:85635206-85635225 None:intergenic 25.0%
! TCCTTCACAAAAACATTAAT+AGG + Chr1:85636967-85636986 MsG0180005010.01.T01:intron 25.0%
! TGAGCAATTTATAACATATC+GGG - Chr1:85636393-85636412 None:intergenic 25.0%
! TGCATATGAGTAACAAAATA+TGG - Chr1:85635702-85635721 None:intergenic 25.0%
! TGGCTTAAAATAGTGAAAAT+TGG - Chr1:85637090-85637109 None:intergenic 25.0%
! TTTAAGCCACTTGAAATTAA+AGG + Chr1:85637101-85637120 MsG0180005010.01.T01:intron 25.0%
!! AACTATCCTTTAATTTCAAG+TGG - Chr1:85637110-85637129 None:intergenic 25.0%
!! CACAAGAAGTATAAATTTAG+TGG - Chr1:85637658-85637677 None:intergenic 25.0%
!! TAATTATTTTCGATACTTCG+TGG - Chr1:85637440-85637459 None:intergenic 25.0%
!! TACACTCACTCAATTTTAAA+AGG + Chr1:85636878-85636897 MsG0180005010.01.T01:intron 25.0%
!! TATTTGTTAGTATGATGTTG+CGG + Chr1:85636595-85636614 MsG0180005010.01.T01:intron 25.0%
!! TTGATATTAAGTTGTGTTGA+TGG - Chr1:85636672-85636691 None:intergenic 25.0%
!! TTTATGAGCTCATATTTTCT+GGG - Chr1:85635518-85635537 None:intergenic 25.0%
!! TTTTAACAACATGCACATTA+AGG - Chr1:85636799-85636818 None:intergenic 25.0%
!! TTTTACCTTTCATCTTTTCT+AGG - Chr1:85637553-85637572 None:intergenic 25.0%
!! TTTTTATGAACGAGAAATGT+TGG + Chr1:85636560-85636579 MsG0180005010.01.T01:intron 25.0%
!!! ACCTATTAATGTTTTTGTGA+AGG - Chr1:85636971-85636990 None:intergenic 25.0%
!!! AGATTTTTTGAAAGACATGT+TGG - Chr1:85636317-85636336 None:intergenic 25.0%
!!! TATACATTAATTGTTGACTC+AGG - Chr1:85636717-85636736 None:intergenic 25.0%
AAGAACTTGAATTCGATTGT+TGG + Chr1:85635096-85635115 MsG0180005010.01.T01:CDS 30.0%
AATATTCATACACACCTCAA+TGG - Chr1:85635887-85635906 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG - Chr1:85635239-85635258 None:intergenic 30.0%
ATATACAGATTGGATTGCTT+TGG - Chr1:85634961-85634980 None:intergenic 30.0%
CATATCCTAGAAAAGATGAA+AGG + Chr1:85637545-85637564 MsG0180005010.01.T01:intron 30.0%
CTTTGAATTACCAATGACTA+CGG + Chr1:85634923-85634942 MsG0180005010.01.T01:CDS 30.0%
GAATAATTAAGTCTTGGATG+AGG - Chr1:85635200-85635219 None:intergenic 30.0%
GAGTTAATATATGGAGCAAT+AGG - Chr1:85636646-85636665 None:intergenic 30.0%
GTATACAAACTGTTCAAATC+CGG - Chr1:85635584-85635603 None:intergenic 30.0%
GTGTATTCTACTAAATCTCA+CGG + Chr1:85636989-85637008 MsG0180005010.01.T01:intron 30.0%
GTTAATATATGGAGCAATAG+GGG - Chr1:85636644-85636663 None:intergenic 30.0%
TCGTGTAATATTGTCTACAT+GGG - Chr1:85636160-85636179 None:intergenic 30.0%
TGATGGTCAGAGTTAATATA+TGG - Chr1:85636655-85636674 None:intergenic 30.0%
TTGCTCAAGTAATTTGAAGA+AGG + Chr1:85636406-85636425 MsG0180005010.01.T01:CDS 30.0%
TTTATACTTCTTGTGGATGA+AGG + Chr1:85637663-85637682 MsG0180005010.01.T01:intron 30.0%
TTTATGCAGTTTCTAAGCAT+GGG + Chr1:85635730-85635749 MsG0180005010.01.T01:intron 30.0%
! ATTTCTTTATTTCCACGTCT+TGG + Chr1:85635416-85635435 MsG0180005010.01.T01:CDS 30.0%
! ATTTGTTAGTATGATGTTGC+GGG + Chr1:85636596-85636615 MsG0180005010.01.T01:intron 30.0%
! GTTTATGAGCTCATATTTTC+TGG - Chr1:85635519-85635538 None:intergenic 30.0%
! TCATTGGTAATTCAAAGTCA+AGG - Chr1:85634920-85634939 None:intergenic 30.0%
! TTTTATGCAGTTTCTAAGCA+TGG + Chr1:85635729-85635748 MsG0180005010.01.T01:intron 30.0%
!! TCTACTGGTTTGTTTGAATT+TGG - Chr1:85636446-85636465 None:intergenic 30.0%
!!! ATTGGTTTTATAATTGGTGC+TGG - Chr1:85637244-85637263 None:intergenic 30.0%
!!! GAAAATTTTTGAAACCGAAG+AGG + Chr1:85636256-85636275 MsG0180005010.01.T01:intron 30.0%
!!! GTGGGTATTGGTTTTATAAT+TGG - Chr1:85637250-85637269 None:intergenic 30.0%
!!! TGTAAGACTCTTTTGTTGTT+AGG - Chr1:85634845-85634864 None:intergenic 30.0%
AAACAGAGATGTACTCGTAT+CGG + Chr1:85637379-85637398 MsG0180005010.01.T01:intron 35.0%
AAGATTGAGCGAAAGATACT+TGG + Chr1:85635993-85636012 MsG0180005010.01.T01:intron 35.0%
ACAAATCCTCCATTCTAGTA+TGG + Chr1:85636489-85636508 MsG0180005010.01.T01:CDS 35.0%
ACCATATGATATGCACTTGT+GGG + Chr1:85635046-85635065 MsG0180005010.01.T01:CDS 35.0%
ACTTAGAAATGGAAAGCCTA+AGG - Chr1:85635148-85635167 None:intergenic 35.0%
ACTTCATACCCATACTAGAA+TGG - Chr1:85636501-85636520 None:intergenic 35.0%
ATGAAGCCCGTATATAGAAA+CGG - Chr1:85637985-85638004 None:intergenic 35.0%
ATGCATAGTTCAAGTACAGT+GGG - Chr1:85637268-85637287 None:intergenic 35.0%
CAAATCCTCCATTCTAGTAT+GGG + Chr1:85636490-85636509 MsG0180005010.01.T01:CDS 35.0%
CAACAAGAAACCGAAAACAA+TGG + Chr1:85634743-85634762 MsG0180005010.01.T01:CDS 35.0%
CAGTGTTCTATCTACAAGAT+GGG + Chr1:85634869-85634888 MsG0180005010.01.T01:CDS 35.0%
CTTAGAAATGGAAAGCCTAA+GGG - Chr1:85635147-85635166 None:intergenic 35.0%
GGTAATTCAAAGTCAAGGTT+GGG - Chr1:85634915-85634934 None:intergenic 35.0%
GTAATTCAAAGTCAAGGTTG+GGG - Chr1:85634914-85634933 None:intergenic 35.0%
GTCGTGTAATATTGTCTACA+TGG - Chr1:85636161-85636180 None:intergenic 35.0%
TAGAGATATGTTATGAAGCC+CGG + Chr1:85637348-85637367 MsG0180005010.01.T01:intron 35.0%
TCAAAACGTACAAACTGAGT+TGG + Chr1:85636361-85636380 MsG0180005010.01.T01:CDS 35.0%
TCTTCGCATTAGTAATCATC+CGG + Chr1:85635562-85635581 MsG0180005010.01.T01:CDS 35.0%
TGAAAGACATGTTGGAGTTT+CGG - Chr1:85636309-85636328 None:intergenic 35.0%
TGGTAATTCAAAGTCAAGGT+TGG - Chr1:85634916-85634935 None:intergenic 35.0%
TGTGAAAAGTGAGAAGATGT+AGG - Chr1:85635771-85635790 None:intergenic 35.0%
TTAGAAATGGAAAGCCTAAG+GGG - Chr1:85635146-85635165 None:intergenic 35.0%
TTATGCAGTTTCTAAGCATG+GGG + Chr1:85635731-85635750 MsG0180005010.01.T01:intron 35.0%
TTTACATGACTGCATGAAAC+AGG + Chr1:85635352-85635371 MsG0180005010.01.T01:CDS 35.0%
TTTCTATATACGGGCTTCAT+AGG + Chr1:85637985-85638004 MsG0180005010.01.T01:intron 35.0%
! AATTTGGAGTGGACAAACAT+TGG - Chr1:85635447-85635466 None:intergenic 35.0%
! ACCCCTTTTAACAAATCAGT+GGG + Chr1:85636820-85636839 MsG0180005010.01.T01:intron 35.0%
! ATACGAGTACATCTCTGTTT+TGG - Chr1:85637379-85637398 None:intergenic 35.0%
! ATGGCAAGATGCTTAAGTTT+TGG - Chr1:85635868-85635887 None:intergenic 35.0%
! ATTCAAGTTCTTGAACCTTG+AGG - Chr1:85635088-85635107 None:intergenic 35.0%
! TACCCCTTTTAACAAATCAG+TGG + Chr1:85636819-85636838 MsG0180005010.01.T01:intron 35.0%
!! ACACCCACTGATTTGTTAAA+AGG - Chr1:85636826-85636845 None:intergenic 35.0%
!! ACCCACTGATTTGTTAAAAG+GGG - Chr1:85636824-85636843 None:intergenic 35.0%
!! CACCCACTGATTTGTTAAAA+GGG - Chr1:85636825-85636844 None:intergenic 35.0%
AAGAGGTTGAAAACACAGGT+TGG + Chr1:85636273-85636292 MsG0180005010.01.T01:CDS 40.0%
AAGAGTAGCTCGATCAAGAT+TGG - Chr1:85635546-85635565 None:intergenic 40.0%
AATATATGGAGCAATAGGGG+AGG - Chr1:85636641-85636660 None:intergenic 40.0%
ACCCACAAGTGCATATCATA+TGG - Chr1:85635050-85635069 None:intergenic 40.0%
ACTTAAGCATCTTGCCATTG+AGG + Chr1:85635870-85635889 MsG0180005010.01.T01:CDS 40.0%
AGAGGTTGAAAACACAGGTT+GGG + Chr1:85636274-85636293 MsG0180005010.01.T01:CDS 40.0%
AGTAGAAAGAAGCTTACTCG+AGG + Chr1:85636460-85636479 MsG0180005010.01.T01:CDS 40.0%
AGTTCAAGTACAGTGGGTAT+TGG - Chr1:85637262-85637281 None:intergenic 40.0%
ATATATGGAGCAATAGGGGA+GGG - Chr1:85636640-85636659 None:intergenic 40.0%
ATTTGCAGAACGTCAAGTGA+CGG - Chr1:85635476-85635495 None:intergenic 40.0%
CAACGTGGATACATGTTTGT+TGG + Chr1:85637179-85637198 MsG0180005010.01.T01:intron 40.0%
CACCATATGATATGCACTTG+TGG + Chr1:85635045-85635064 MsG0180005010.01.T01:CDS 40.0%
CCAGTGTTCTATCTACAAGA+TGG + Chr1:85634868-85634887 MsG0180005010.01.T01:CDS 40.0%
CCATCTTGTAGATAGAACAC+TGG - Chr1:85634871-85634890 None:intergenic 40.0%
CGTCTGAAAGATCGCTTAAT+CGG - Chr1:85634797-85634816 None:intergenic 40.0%
CTAAGTCTCTATAGTGACGA+TGG + Chr1:85635017-85635036 MsG0180005010.01.T01:CDS 40.0%
GATGCATAGTTCAAGTACAG+TGG - Chr1:85637269-85637288 None:intergenic 40.0%
GTAGAAAGAAGCTTACTCGA+GGG + Chr1:85636461-85636480 MsG0180005010.01.T01:CDS 40.0%
TAATCGGTCCTGCTCTTTAT+CGG - Chr1:85634781-85634800 None:intergenic 40.0%
TAGAAAGAAGCTTACTCGAG+GGG + Chr1:85636462-85636481 MsG0180005010.01.T01:CDS 40.0%
TATGCAGTTTCTAAGCATGG+GGG + Chr1:85635732-85635751 MsG0180005010.01.T01:intron 40.0%
TCATACCCATACTAGAATGG+AGG - Chr1:85636498-85636517 None:intergenic 40.0%
TCGAGTAAGCTTCTTTCTAC+TGG - Chr1:85636461-85636480 None:intergenic 40.0%
TCTTTGTCGAAATCAAGTGC+AGG - Chr1:85637067-85637086 None:intergenic 40.0%
TGAAGCCCGTATATAGAAAC+GGG - Chr1:85637984-85638003 None:intergenic 40.0%
TGAATTCGATTGTTGGTCCA+TGG + Chr1:85635103-85635122 MsG0180005010.01.T01:CDS 40.0%
TTCCATTTCTAAGTCGCTTG+TGG + Chr1:85635154-85635173 MsG0180005010.01.T01:CDS 40.0%
! ACCTGTGTTTTCAACCTCTT+CGG - Chr1:85636273-85636292 None:intergenic 40.0%
! CGCTTGTGGTCTTAAAATTG+CGG + Chr1:85635168-85635187 MsG0180005010.01.T01:CDS 40.0%
! CTTGTGGTCTTAAAATTGCG+GGG + Chr1:85635170-85635189 MsG0180005010.01.T01:CDS 40.0%
! GCTTGTGGTCTTAAAATTGC+GGG + Chr1:85635169-85635188 MsG0180005010.01.T01:CDS 40.0%
! TCTTTATTTCCACGTCTTGG+TGG + Chr1:85635419-85635438 MsG0180005010.01.T01:CDS 40.0%
!! CAATAAGGTTGGTTTCTCCA+TGG - Chr1:85635123-85635142 None:intergenic 40.0%
!! CTGTTGTTTCAAGCATCTGA+GGG - Chr1:85637293-85637312 None:intergenic 40.0%
!! TAATTGGTGCTGGAAGAAAG+AGG - Chr1:85637234-85637253 None:intergenic 40.0%
!! TTAAGTTTTCGGTGCGTCTA+AGG - Chr1:85634992-85635011 None:intergenic 40.0%
!! TTCAAAAGCACTAGACCTCA+AGG + Chr1:85635070-85635089 MsG0180005010.01.T01:CDS 40.0%
!!! ATCTCTGTTTTGGAGTATCC+GGG - Chr1:85637369-85637388 None:intergenic 40.0%
!!! CATCTCTGTTTTGGAGTATC+CGG - Chr1:85637370-85637389 None:intergenic 40.0%
AAAGTCAAGGTTGGGGATCT+TGG - Chr1:85634907-85634926 None:intergenic 45.0%
AACCAACCTTATTGCCCCTT+AGG + Chr1:85635129-85635148 MsG0180005010.01.T01:CDS 45.0%
ACCGAAGAGGTTGAAAACAC+AGG + Chr1:85636269-85636288 MsG0180005010.01.T01:CDS 45.0%
AGACATGTTGGAGTTTCGGA+TGG - Chr1:85636305-85636324 None:intergenic 45.0%
ATCTCGTTGTCCACATCTTG+AGG + Chr1:85635322-85635341 MsG0180005010.01.T01:CDS 45.0%
CCTCAGATGCTTGAAACAAC+AGG + Chr1:85637291-85637310 MsG0180005010.01.T01:intron 45.0%
CTCTGAATCCGATAAAGAGC+AGG + Chr1:85634770-85634789 MsG0180005010.01.T01:CDS 45.0%
GACATAGGATCCGTAGTCAT+TGG - Chr1:85634936-85634955 None:intergenic 45.0%
GACCACAAGCGACTTAGAAA+TGG - Chr1:85635159-85635178 None:intergenic 45.0%
GGAGAGCTGCATATACAGAT+TGG - Chr1:85634971-85634990 None:intergenic 45.0%
GTACGATACATACGGATACG+TGG - Chr1:85637956-85637975 None:intergenic 45.0%
GTTAGTATGATGTTGCGGGA+TGG + Chr1:85636600-85636619 MsG0180005010.01.T01:intron 45.0%
TTTGCAGAACGTCAAGTGAC+GGG - Chr1:85635475-85635494 None:intergenic 45.0%
! CAAGTGACGGGGCATTAATT+TGG - Chr1:85635463-85635482 None:intergenic 45.0%
! GTTGAAAACACAGGTTGGGT+GGG + Chr1:85636278-85636297 MsG0180005010.01.T01:CDS 45.0%
! TCAGAGCACGCCATTGTTTT+CGG - Chr1:85634756-85634775 None:intergenic 45.0%
! TGGATTGCTTTGGACGACAT+AGG - Chr1:85634951-85634970 None:intergenic 45.0%
! TTGAAAACACAGGTTGGGTG+GGG + Chr1:85636279-85636298 MsG0180005010.01.T01:CDS 45.0%
!! CCTGTTGTTTCAAGCATCTG+AGG - Chr1:85637294-85637313 None:intergenic 45.0%
!!! ATTCAAAAAAAATATTTTAT+CGG + Chr1:85637465-85637484 MsG0180005010.01.T01:intron 5.0%
ACATTGGAACCACCAAGACG+TGG - Chr1:85635431-85635450 None:intergenic 50.0%
AGCCTAAGGGGCAATAAGGT+TGG - Chr1:85635134-85635153 None:intergenic 50.0%
CCCGCACCCGTTTCTATATA+CGG + Chr1:85637975-85637994 MsG0180005010.01.T01:intron 50.0%
CCCGTATATAGAAACGGGTG+CGG - Chr1:85637979-85637998 None:intergenic 50.0%
CCGCACCCGTTTCTATATAC+GGG + Chr1:85637976-85637995 MsG0180005010.01.T01:intron 50.0%
CCGTATATAGAAACGGGTGC+GGG - Chr1:85637978-85637997 None:intergenic 50.0%
GGAAAGCCTAAGGGGCAATA+AGG - Chr1:85635138-85635157 None:intergenic 50.0%
TTGCAGAACGTCAAGTGACG+GGG - Chr1:85635474-85635493 None:intergenic 50.0%
! GACGGGGCATTAATTTGGAG+TGG - Chr1:85635458-85635477 None:intergenic 50.0%
! GGTTGAAAACACAGGTTGGG+TGG + Chr1:85636277-85636296 MsG0180005010.01.T01:CDS 50.0%
! GTGGTCTTAAAATTGCGGGG+CGG + Chr1:85635173-85635192 MsG0180005010.01.T01:CDS 50.0%
! TGCGCAACTGTTTCTCAACG+TGG + Chr1:85637164-85637183 MsG0180005010.01.T01:intron 50.0%
GGGTGCGGGTACGATACATA+CGG - Chr1:85637964-85637983 None:intergenic 55.0%
TATGGAGCAATAGGGGAGGG+TGG - Chr1:85636637-85636656 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 85634732 85638082 85634732 ID=MsG0180005010.01;Name=MsG0180005010.01
Chr1 mRNA 85634732 85638082 85634732 ID=MsG0180005010.01.T01;Parent=MsG0180005010.01;Name=MsG0180005010.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|0.66|0.75|4|0|451
Chr1 exon 85634732 85635661 85634732 ID=MsG0180005010.01.T01:exon:28241;Parent=MsG0180005010.01.T01
Chr1 exon 85635739 85635891 85635739 ID=MsG0180005010.01.T01:exon:28242;Parent=MsG0180005010.01.T01
Chr1 exon 85636257 85636511 85636257 ID=MsG0180005010.01.T01:exon:28243;Parent=MsG0180005010.01.T01
Chr1 exon 85638065 85638082 85638065 ID=MsG0180005010.01.T01:exon:28244;Parent=MsG0180005010.01.T01
Chr1 CDS 85634732 85635661 85634732 ID=MsG0180005010.01.T01:cds;Parent=MsG0180005010.01.T01
Chr1 CDS 85635739 85635891 85635739 ID=MsG0180005010.01.T01:cds;Parent=MsG0180005010.01.T01
Chr1 CDS 85636257 85636511 85636257 ID=MsG0180005010.01.T01:cds;Parent=MsG0180005010.01.T01
Chr1 CDS 85638065 85638082 85638065 ID=MsG0180005010.01.T01:cds;Parent=MsG0180005010.01.T01
Gene Sequence

>MsG0180005010.01.T01

ATGGAGGAAGTCAACAAGAAACCGAAAACAATGGCGTGCTCTGAATCCGATAAAGAGCAGGACCGATTAAGCGATCTTTCAGACGAATTGATTATTCATATTTTGTCTTTCCTAACAACAAAAGAGTCTTACAGAACCAGTGTTCTATCTACAAGATGGGAGTCGATTTGCACCAAGATCCCCAACCTTGACTTTGAATTACCAATGACTACGGATCCTATGTCGTCCAAAGCAATCCAATCTGTATATGCAGCTCTCCTTAGACGCACCGAAAACTTAAGAAAACTAAGTCTCTATAGTGACGATGGTTGCACACCATATGATATGCACTTGTGGGTTTCAAAAGCACTAGACCTCAAGGTTCAAGAACTTGAATTCGATTGTTGGTCCATGGAGAAACCAACCTTATTGCCCCTTAGGCTTTCCATTTCTAAGTCGCTTGTGGTCTTAAAATTGCGGGGCGGACCTCATCCAAGACTTAATTATTCTTCTGATGTGTGTTTTCCGTCACTAAAGATTCTTCATCTCCAACTTATTGTGTTTAATTCTATCTTGGATAATCATAGTGAGTATGATCTTGCTAATTTTCTATCTCGTTGTCCACATCTTGAGGAATTTTTTTTACATGACTGCATGAAACAGGCGATCAATATTGTCTCTTTTCACTCGTTAAAGAGAGTATTCATTTCTTTATTTCCACGTCTTGGTGGTTCCAATGTTTGTCCACTCCAAATTAATGCCCCGTCACTTGACGTTCTGCAAATTGTTGATACTTCAATTTCTCCCAGAAAATATGAGCTCATAAACTTGTCCAATCTTGATCGAGCTACTCTTCGCATTAGTAATCATCCGGATTTGAACAGTTTGTATACACTCTTGAAAGAAATTTCTAATGTTAAATCACTGACTATCAGTTCTGAAACTATTCATTTTCTAAGCATGGGGGATAATCTTGACAACCTACATCTTCTCACTTTTCACAATTTATCATCTTTATCGGTTGAAATATCTGAAAATTGTTGTTGGAATGTGCTTGTTAGCATACTACAGTATGCTCCAAAACTTAAGCATCTTGCCATTGAGAAAATTTTTGAAACCGAAGAGGTTGAAAACACAGGTTGGGTGGGGCCATCCGAAACTCCAACATGTCTTTCAAAAAATCTCATTACATTTGAATTTAGAGGAATTCAAAACGTACAAACTGAGTTGGACTTTACCCGATATGTTATAAATTGCTCAAGTAATTTGAAGAAGGCAAAGATTTTCACTCCAAATTCAAACAAACCAGTAGAAAGAAGCTTACTCGAGGGGTCAAACAAATCCTCCATTCTAGTATGGGATATTAATTCAATTTGA

Protein sequence

>MsG0180005010.01.T01

MEEVNKKPKTMACSESDKEQDRLSDLSDELIIHILSFLTTKESYRTSVLSTRWESICTKIPNLDFELPMTTDPMSSKAIQSVYAALLRRTENLRKLSLYSDDGCTPYDMHLWVSKALDLKVQELEFDCWSMEKPTLLPLRLSISKSLVVLKLRGGPHPRLNYSSDVCFPSLKILHLQLIVFNSILDNHSEYDLANFLSRCPHLEEFFLHDCMKQAINIVSFHSLKRVFISLFPRLGGSNVCPLQINAPSLDVLQIVDTSISPRKYELINLSNLDRATLRISNHPDLNSLYTLLKEISNVKSLTISSETIHFLSMGDNLDNLHLLTFHNLSSLSVEISENCCWNVLVSILQYAPKLKHLAIEKIFETEEVENTGWVGPSETPTCLSKNLITFEFRGIQNVQTELDFTRYVINCSSNLKKAKIFTPNSNKPVERSLLEGSNKSSILVWDINSI*