AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007849.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007849.01.T04 MTR_7g033990 70.192 104 30 1 1 104 261 363 1.85e-49 162
MsG0280007849.01.T04 MTR_7g033915 70.192 104 30 1 1 104 243 345 2.30e-49 160
MsG0280007849.01.T04 MTR_7g034120 60.870 115 40 2 1 115 190 299 5.82e-39 132
MsG0280007849.01.T04 MTR_7g032380 58.879 107 41 2 1 104 230 336 3.22e-36 126
MsG0280007849.01.T04 MTR_7g034115 56.075 107 44 2 1 104 257 363 7.69e-35 123
MsG0280007849.01.T04 MTR_7g034110 63.043 92 31 2 1 92 222 310 3.81e-34 120
MsG0280007849.01.T04 MTR_7g032370 53.704 108 46 2 1 104 225 332 8.25e-33 117
MsG0280007849.01.T04 MTR_7g056433 54.286 105 47 1 1 104 265 369 7.16e-32 115
MsG0280007849.01.T04 MTR_1g041245 53.211 109 45 3 1 104 259 366 1.60e-30 112
MsG0280007849.01.T04 MTR_8g085430 56.701 97 34 2 15 104 213 308 5.74e-30 109
MsG0280007849.01.T04 MTR_5g012840 50.435 115 55 2 1 115 197 309 2.63e-29 107
MsG0280007849.01.T04 MTR_2g020180 53.061 98 36 2 8 104 110 198 1.48e-28 103
MsG0280007849.01.T04 MTR_3g115430 50.459 109 48 3 1 104 1 108 6.02e-28 99.4
MsG0280007849.01.T04 MTR_7g115270 51.402 107 47 3 1 104 278 382 1.59e-27 104
MsG0280007849.01.T04 MTR_7g081290 48.980 98 47 2 9 104 143 239 2.58e-27 101
MsG0280007849.01.T04 MTR_7g098510 46.364 110 54 4 9 115 275 382 3.47e-26 100
MsG0280007849.01.T04 MTR_7g088260 47.273 110 50 3 1 104 336 443 8.04e-24 94.7
MsG0280007849.01.T04 MTR_0492s0020 45.946 111 50 4 1 104 323 430 1.70e-23 93.6
MsG0280007849.01.T04 MTR_0543s0010 45.946 111 50 4 1 104 323 430 2.06e-23 93.6
MsG0280007849.01.T04 MTR_7g056430 47.414 116 55 4 1 111 237 351 3.74e-23 93.2
MsG0280007849.01.T04 MTR_7g056420 47.414 116 55 4 1 111 237 351 4.32e-23 93.2
MsG0280007849.01.T04 MTR_5g013500 46.552 116 60 2 1 114 240 355 6.39e-23 91.3
MsG0280007849.01.T04 MTR_5g008950 45.263 95 45 3 13 103 253 344 2.78e-22 89.7
MsG0280007849.01.T04 MTR_3g082890 48.000 100 49 2 8 104 368 467 4.04e-21 87.4
MsG0280007849.01.T04 MTR_3g108150 47.664 107 53 3 1 104 261 367 1.46e-20 85.1
MsG0280007849.01.T04 MTR_3g107940 51.899 79 38 0 13 91 110 188 2.93e-20 84.0
MsG0280007849.01.T04 MTR_7g098480 42.727 110 58 4 9 115 273 380 3.96e-20 84.3
MsG0280007849.01.T04 MTR_3g087260 45.098 102 39 3 13 104 343 437 4.58e-20 84.3
MsG0280007849.01.T04 MTR_3g108560 47.917 96 43 3 13 104 277 369 6.40e-20 83.6
MsG0280007849.01.T04 MTR_7g098570 42.017 119 63 5 1 115 268 384 8.15e-20 83.6
MsG0280007849.01.T04 MTR_7g056020 48.421 95 48 1 13 106 262 356 1.02e-19 83.6
MsG0280007849.01.T04 MTR_3g036250 39.316 117 66 3 1 115 244 357 3.97e-19 81.3
MsG0280007849.01.T04 MTR_2g007450 48.235 85 40 2 12 92 308 392 7.84e-19 80.5
MsG0280007849.01.T04 MTR_3g107100 45.882 85 44 1 12 94 274 358 2.11e-18 79.3
MsG0280007849.01.T04 MTR_5g008920 45.161 93 47 3 13 103 270 360 7.58e-18 77.8
MsG0280007849.01.T04 MTR_3g109982 42.202 109 58 3 1 104 347 455 9.94e-18 77.8
MsG0280007849.01.T04 MTR_3g467400 62.712 59 21 1 47 104 289 347 1.03e-17 77.4
MsG0280007849.01.T04 MTR_4g080610 43.878 98 52 2 10 104 241 338 1.14e-17 77.0
MsG0280007849.01.T04 MTR_7g056280 36.937 111 54 3 8 110 456 558 1.44e-17 77.4
MsG0280007849.01.T04 MTR_3g107120 38.679 106 53 3 11 112 281 378 1.94e-17 76.6
MsG0280007849.01.T04 MTR_5g054920 34.021 97 63 1 1 97 87 182 2.40e-17 73.9
MsG0280007849.01.T04 MTR_3g113785 43.529 85 41 1 8 85 11 95 9.29e-17 70.1
MsG0280007849.01.T04 MTR_3g082890 34.307 137 50 4 8 104 288 424 1.24e-16 74.3
MsG0280007849.01.T04 MTR_3g094980 42.353 85 45 2 12 92 33 117 1.77e-16 71.2
MsG0280007849.01.T04 MTR_1g043170 53.333 60 27 1 46 104 12 71 2.78e-16 68.6
MsG0280007849.01.T04 MTR_5g045170 39.080 87 52 1 8 94 275 360 3.30e-16 73.2
MsG0280007849.01.T04 MTR_3g106960 40.909 88 49 1 11 95 87 174 5.79e-16 71.2
MsG0280007849.01.T04 MTR_7g034090 45.783 83 43 2 12 93 205 286 5.96e-16 72.4
MsG0280007849.01.T04 MTR_7g083740 38.889 90 43 2 12 92 251 337 6.59e-16 72.4
MsG0280007849.01.T04 MTR_6g022500 36.036 111 69 1 1 111 354 462 1.40e-15 71.6
MsG0280007849.01.T04 MTR_3g107160 41.176 85 48 1 11 93 273 357 1.98e-15 70.9
MsG0280007849.01.T04 MTR_1377s0010 40.741 81 46 1 12 92 49 127 2.17e-15 67.4
MsG0280007849.01.T04 MTR_2g007550 40.698 86 48 2 12 94 228 313 3.03e-15 70.1
MsG0280007849.01.T04 MTR_5g007410 36.559 93 58 1 1 93 285 376 7.08e-15 69.3
MsG0280007849.01.T04 MTR_7g026500 36.905 84 53 0 12 95 284 367 1.03e-14 68.9
MsG0280007849.01.T04 MTR_1g053025 35.632 87 51 2 10 92 276 361 1.30e-14 68.6
MsG0280007849.01.T04 MTR_1g108820 41.667 84 44 2 12 95 277 355 1.31e-14 68.6
MsG0280007849.01.T04 MTR_6g045333 35.484 93 59 1 1 92 321 413 1.63e-14 68.6
MsG0280007849.01.T04 MTR_6g040270 38.095 84 49 2 12 95 268 348 2.67e-14 67.8
MsG0280007849.01.T04 MTR_7g022105 38.710 93 54 2 1 92 303 393 2.99e-14 67.8
MsG0280007849.01.T04 MTR_3g040700 40.449 89 52 1 1 88 282 370 3.21e-14 67.8
MsG0280007849.01.T04 MTR_7g021990 36.458 96 55 3 1 92 299 392 3.62e-14 67.4
MsG0280007849.01.T04 MTR_7g007080 40.230 87 46 2 12 92 267 353 3.64e-14 67.4
MsG0280007849.01.T04 MTR_7g021950 36.458 96 55 3 1 92 299 392 3.76e-14 67.4
MsG0280007849.01.T04 MTR_3g023630 41.837 98 52 4 19 115 272 365 4.50e-14 67.0
MsG0280007849.01.T04 MTR_7g056277 36.842 95 57 2 1 95 507 598 5.86e-14 67.0
MsG0280007849.01.T04 MTR_2g036470 39.506 81 48 1 17 96 287 367 6.82e-14 66.6
MsG0280007849.01.T04 MTR_0009s0080 37.037 81 51 0 12 92 287 367 9.28e-14 66.2
MsG0280007849.01.T04 MTR_3g071850 36.364 88 49 2 12 95 295 379 9.32e-14 66.2
MsG0280007849.01.T04 MTR_5g008910 54.545 55 22 1 50 104 231 282 1.04e-13 65.9
MsG0280007849.01.T04 MTR_5g073370 40.777 103 43 4 1 95 258 350 1.12e-13 65.9
MsG0280007849.01.T04 MTR_3g026920 42.169 83 44 2 13 92 300 381 1.31e-13 65.9
MsG0280007849.01.T04 MTR_3g113770 60.465 43 17 0 40 82 292 334 1.42e-13 65.5
MsG0280007849.01.T04 MTR_6g022360 38.144 97 56 2 1 95 284 378 1.59e-13 65.5
MsG0280007849.01.T04 MTR_4g096730 50.943 53 26 0 46 98 13 65 3.70e-13 60.8
MsG0280007849.01.T04 MTR_2g007400 35.870 92 48 3 12 92 284 375 4.55e-13 64.3
MsG0280007849.01.T04 MTR_6g022520 35.789 95 59 1 1 95 191 283 1.06e-12 63.2
MsG0280007849.01.T04 MTR_5g073420 38.272 81 47 2 12 92 267 344 1.25e-12 63.2
MsG0280007849.01.T04 MTR_1g066830 35.714 84 51 2 12 95 276 356 1.96e-12 62.4
MsG0280007849.01.T04 MTR_5g024060 34.568 81 52 1 12 92 99 178 2.16e-12 61.6
MsG0280007849.01.T04 MTR_3g105060 41.250 80 41 2 17 95 273 347 2.26e-12 62.4
MsG0280007849.01.T04 MTR_2g005990 42.529 87 39 5 17 92 281 367 2.53e-12 62.0
MsG0280007849.01.T04 MTR_1g107385 37.079 89 46 3 13 92 308 395 4.82e-12 61.2
MsG0280007849.01.T04 MTR_4g098590 41.667 84 45 3 13 92 271 354 5.54e-12 61.2
MsG0280007849.01.T04 MTR_1g108800 41.860 86 45 2 12 97 234 314 6.58e-12 60.8
MsG0280007849.01.T04 MTR_7g114710 35.514 107 53 3 12 106 246 348 6.86e-12 60.8
MsG0280007849.01.T04 MTR_7g056287 35.789 95 58 2 1 95 251 342 8.60e-12 60.5
MsG0280007849.01.T04 MTR_2g007610 39.286 84 47 2 13 92 40 123 1.15e-11 58.5
MsG0280007849.01.T04 MTR_4g039440 34.000 100 64 1 1 100 287 384 1.60e-11 60.1
MsG0280007849.01.T04 MTR_5g083890 36.047 86 45 2 17 92 289 374 2.09e-11 59.7
MsG0280007849.01.T04 MTR_3g095630 33.696 92 57 2 1 92 64 151 2.35e-11 58.2
MsG0280007849.01.T04 MTR_7g060470 36.190 105 53 5 1 98 270 367 2.54e-11 59.3
MsG0280007849.01.T04 MTR_5g033200 33.684 95 59 2 1 95 59 149 3.33e-11 57.8
MsG0280007849.01.T04 MTR_6g033095 37.647 85 51 1 17 101 111 193 3.99e-11 57.8
MsG0280007849.01.T04 MTR_7g055943 36.634 101 56 2 1 95 293 391 4.18e-11 58.9
MsG0280007849.01.T04 MTR_1089s0010 36.905 84 50 1 12 95 266 346 4.83e-11 58.5
MsG0280007849.01.T04 MTR_3g108140 42.254 71 40 1 46 115 69 139 6.84e-11 56.6
MsG0280007849.01.T04 MTR_1g085120 31.818 110 73 1 1 110 349 456 7.39e-11 58.2
MsG0280007849.01.T04 MTR_1g085120 31.818 110 73 1 1 110 424 531 7.54e-11 58.2
MsG0280007849.01.T04 MTR_5g063950 36.905 84 50 1 12 92 246 329 9.75e-11 57.8
MsG0280007849.01.T03 MTR_7g034120 68.683 281 78 4 1 276 24 299 2.88e-125 359
MsG0280007849.01.T03 MTR_7g033915 64.179 268 74 5 1 265 97 345 2.51e-112 328
MsG0280007849.01.T03 MTR_7g033990 62.362 271 92 9 1 265 97 363 4.56e-102 304
MsG0280007849.01.T03 MTR_5g012840 47.670 279 105 6 1 276 69 309 2.36e-71 222
MsG0280007849.01.T03 MTR_1g041245 46.975 281 122 10 1 265 97 366 6.91e-69 218
MsG0280007849.01.T03 MTR_7g034110 49.219 256 88 6 1 253 94 310 1.49e-66 211
MsG0280007849.01.T03 MTR_7g032370 45.018 271 129 8 1 265 76 332 1.42e-61 198
MsG0280007849.01.T03 MTR_7g034115 45.196 281 124 11 1 265 97 363 3.73e-61 198
MsG0280007849.01.T03 MTR_7g032380 42.963 270 118 7 1 265 98 336 1.36e-56 186
MsG0280007849.01.T03 MTR_7g056433 46.014 276 130 12 3 265 100 369 3.96e-56 185
MsG0280007849.01.T03 MTR_7g088260 39.928 278 145 8 1 265 175 443 3.02e-49 169
MsG0280007849.01.T03 MTR_7g098510 39.583 288 151 14 3 276 104 382 4.58e-48 164
MsG0280007849.01.T03 MTR_3g108150 38.989 277 151 7 2 265 96 367 3.53e-47 162
MsG0280007849.01.T03 MTR_7g115270 38.462 299 152 13 3 275 100 392 2.30e-45 157
MsG0280007849.01.T03 MTR_7g098570 40.070 287 149 12 4 276 107 384 2.95e-44 156
MsG0280007849.01.T03 MTR_0492s0020 38.828 273 141 10 4 265 173 430 1.14e-43 154
MsG0280007849.01.T03 MTR_0543s0010 38.828 273 141 10 4 265 173 430 2.03e-43 153
MsG0280007849.01.T03 MTR_3g087260 39.781 274 130 10 11 265 180 437 5.43e-42 150
MsG0280007849.01.T03 MTR_3g108560 37.809 283 141 12 2 265 103 369 7.39e-39 140
MsG0280007849.01.T03 MTR_3g107100 39.738 229 119 7 41 255 135 358 1.77e-38 139
MsG0280007849.01.T03 MTR_7g056277 42.723 213 114 6 48 256 390 598 1.78e-38 142
MsG0280007849.01.T03 MTR_5g013500 40.260 231 117 9 66 275 125 355 9.82e-38 136
MsG0280007849.01.T03 MTR_5g008950 39.056 233 126 8 43 264 117 344 1.11e-37 137
MsG0280007849.01.T03 MTR_7g056420 36.770 291 131 13 1 272 95 351 8.77e-37 139
MsG0280007849.01.T03 MTR_7g098480 36.678 289 156 13 3 276 104 380 1.09e-36 136
MsG0280007849.01.T03 MTR_7g056430 36.770 291 131 13 1 272 95 351 1.26e-36 138
MsG0280007849.01.T03 MTR_3g036250 34.266 286 159 9 1 276 91 357 1.56e-36 133
MsG0280007849.01.T03 MTR_7g056287 40.376 213 119 6 48 256 134 342 1.61e-36 133
MsG0280007849.01.T03 MTR_7g056020 39.669 242 126 8 40 267 121 356 2.12e-36 137
MsG0280007849.01.T03 MTR_3g109982 40.517 232 121 8 47 265 228 455 3.62e-36 137
MsG0280007849.01.T03 MTR_4g080610 36.626 243 133 8 39 265 101 338 5.32e-34 127
MsG0280007849.01.T03 MTR_7g007080 36.604 265 139 10 4 253 103 353 1.53e-33 126
MsG0280007849.01.T03 MTR_3g082890 38.224 259 122 12 40 265 214 467 2.22e-32 124
MsG0280007849.01.T03 MTR_2g007400 32.168 286 164 11 3 265 109 387 2.34e-32 123
MsG0280007849.01.T03 MTR_5g008920 36.496 274 149 11 2 264 101 360 2.77e-32 122
MsG0280007849.01.T03 MTR_5g045170 34.457 267 141 11 8 255 109 360 5.46e-32 122
MsG0280007849.01.T03 MTR_6g045333 32.847 274 149 10 1 253 154 413 6.05e-32 122
MsG0280007849.01.T03 MTR_2g007450 37.959 245 113 10 41 253 155 392 6.52e-32 122
MsG0280007849.01.T03 MTR_3g023630 34.050 279 166 11 4 276 99 365 1.75e-31 120
MsG0280007849.01.T03 MTR_3g107120 32.971 276 152 10 12 273 122 378 1.85e-31 120
MsG0280007849.01.T03 MTR_5g073370 39.207 227 107 10 48 256 137 350 1.94e-31 120
MsG0280007849.01.T03 MTR_7g033945 76.316 76 18 0 1 76 97 172 3.56e-31 114
MsG0280007849.01.T03 MTR_2g020180 42.051 195 81 8 93 265 14 198 5.12e-31 115
MsG0280007849.01.T03 MTR_5g054920 35.567 194 107 6 84 265 2 189 5.91e-31 114
MsG0280007849.01.T03 MTR_5g073420 36.111 252 138 11 8 253 110 344 6.93e-31 119
MsG0280007849.01.T03 MTR_3g040700 31.783 258 151 6 1 249 129 370 8.70e-31 119
MsG0280007849.01.T03 MTR_2g005990 35.036 274 142 12 5 253 105 367 1.90e-30 117
MsG0280007849.01.T03 MTR_7g026500 32.959 267 142 9 15 256 113 367 2.00e-30 117
MsG0280007849.01.T03 MTR_3g467400 35.106 282 140 11 1 265 92 347 3.78e-30 116
MsG0280007849.01.T03 MTR_6g022500 35.223 247 144 7 38 272 220 462 7.84e-30 117
MsG0280007849.01.T03 MTR_7g081290 47.899 119 56 3 152 265 122 239 1.05e-29 113
MsG0280007849.01.T03 MTR_3g105060 34.074 270 147 10 1 259 101 350 2.67e-29 114
MsG0280007849.01.T03 MTR_5g083890 34.000 250 128 10 30 253 136 374 3.00e-29 116
MsG0280007849.01.T03 MTR_0009s0080 34.221 263 144 10 8 253 117 367 3.64e-29 115
MsG0280007849.01.T03 MTR_7g083740 36.364 209 101 8 65 253 141 337 6.57e-29 113
MsG0280007849.01.T03 MTR_7g060470 36.437 247 111 12 47 259 133 367 1.86e-28 112
MsG0280007849.01.T03 MTR_1g108820 37.500 248 118 12 33 256 121 355 4.54e-28 111
MsG0280007849.01.T03 MTR_8g085430 34.191 272 104 11 1 265 105 308 5.27e-28 110
MsG0280007849.01.T03 MTR_3g082890 33.108 296 123 14 40 265 134 424 5.62e-28 111
MsG0280007849.01.T03 MTR_5g007410 32.593 270 150 10 6 256 122 378 1.22e-27 110
MsG0280007849.01.T03 MTR_1g108800 38.496 226 114 9 48 258 99 314 3.50e-27 108
MsG0280007849.01.T03 MTR_3g071850 30.714 280 153 11 1 256 117 379 3.94e-27 110
MsG0280007849.01.T03 MTR_3g107160 31.907 257 154 8 12 256 112 359 4.01e-27 108
MsG0280007849.01.T03 MTR_1g066830 32.975 279 153 12 1 261 99 361 2.27e-26 106
MsG0280007849.01.T03 MTR_7g007340 32.812 256 152 9 11 253 81 329 4.55e-26 105
MsG0280007849.01.T03 MTR_3g115430 50.459 109 48 3 162 265 1 108 4.63e-26 99.8
MsG0280007849.01.T03 MTR_1g107385 34.177 237 122 10 41 253 169 395 5.39e-26 106
MsG0280007849.01.T03 MTR_2g008320 33.198 247 136 9 29 253 160 399 1.36e-25 105
MsG0280007849.01.T03 MTR_5g058000 33.214 280 159 9 1 273 98 356 2.32e-25 103
MsG0280007849.01.T03 MTR_1g085120 33.484 221 128 7 66 271 240 456 6.86e-25 103
MsG0280007849.01.T03 MTR_1g085120 33.484 221 128 7 66 271 315 531 7.10e-25 103
MsG0280007849.01.T03 MTR_4g098590 32.593 270 152 11 4 253 95 354 1.47e-24 101
MsG0280007849.01.T03 MTR_6g040270 31.020 245 149 10 41 272 130 367 2.60e-24 100
MsG0280007849.01.T03 MTR_6g029350 35.429 175 98 6 88 253 2 170 2.95e-24 98.2
MsG0280007849.01.T03 MTR_7g021990 36.486 222 121 9 49 253 174 392 3.30e-24 101
MsG0280007849.01.T03 MTR_1g053025 30.252 238 133 10 41 253 132 361 4.96e-24 100
MsG0280007849.01.T03 MTR_7g021950 36.486 222 121 9 49 253 174 392 6.25e-24 100
MsG0280007849.01.T03 MTR_2g007360 31.336 217 114 7 66 253 134 344 1.39e-23 99.0
MsG0280007849.01.T03 MTR_7g114710 35.345 232 109 9 46 263 140 344 1.83e-23 98.6
MsG0280007849.01.T03 MTR_2g008310 32.365 241 133 10 33 253 113 343 2.17e-23 98.6
MsG0280007849.01.T03 MTR_7g056280 31.048 248 131 9 46 271 329 558 2.19e-23 99.8
MsG0280007849.01.T03 MTR_7g075820 30.916 262 140 11 19 253 119 366 2.26e-23 98.6
MsG0280007849.01.T03 MTR_4g039440 35.377 212 117 7 66 261 177 384 2.44e-23 98.6
MsG0280007849.01.T03 MTR_5g039470 31.559 263 144 11 8 249 80 327 2.96e-23 97.4
MsG0280007849.01.T03 MTR_3g099830 34.052 232 111 10 57 256 128 349 3.45e-23 97.8
MsG0280007849.01.T03 MTR_2g007500 34.118 255 131 12 4 232 91 334 4.92e-23 96.7
MsG0280007849.01.T03 MTR_2g036470 32.231 242 137 9 37 258 134 368 5.91e-23 97.4
MsG0280007849.01.T03 MTR_5g063950 30.545 275 140 10 5 253 80 329 1.81e-22 95.5
MsG0280007849.01.T03 MTR_6g022360 33.333 234 137 7 38 256 149 378 1.93e-22 95.9
MsG0280007849.01.T03 MTR_6g011460 35.455 220 129 7 47 257 174 389 7.51e-22 94.7
MsG0280007849.01.T03 MTR_3g107940 50.000 100 47 1 156 252 89 188 9.25e-22 93.6
MsG0280007849.01.T03 MTR_5g058100 32.340 235 125 10 47 256 128 353 1.12e-21 93.6
MsG0280007849.01.T03 MTR_7g022105 34.234 222 126 7 49 253 175 393 2.05e-21 93.2
MsG0280007849.01.T03 MTR_5g039450 28.889 270 141 10 8 257 101 339 4.92e-21 91.7
MsG0280007849.01.T03 MTR_7g055943 34.061 229 129 7 46 256 167 391 2.17e-20 90.5
MsG0280007849.01.T03 MTR_5g031970 31.034 261 152 9 1 257 91 327 5.63e-20 88.6
MsG0280007849.01.T03 MTR_6g022520 32.039 206 121 6 82 272 98 299 1.32e-19 87.0
MsG0280007849.01.T03 MTR_1089s0010 30.385 260 157 9 5 256 103 346 1.39e-19 87.8
MsG0280007849.01.T03 MTR_3g026920 33.000 200 102 8 79 253 189 381 2.74e-19 87.0
MsG0280007849.01.T03 MTR_7g075800 28.094 299 149 16 17 263 119 403 8.44e-19 86.3
MsG0280007849.01.T03 MTR_5g073340 33.663 202 111 8 49 231 112 309 4.71e-18 82.8
MsG0280007849.01.T03 MTR_3g095630 34.932 146 84 5 113 253 12 151 6.51e-18 80.1
MsG0280007849.01.T03 MTR_2g007550 33.939 165 80 7 114 255 155 313 7.41e-18 82.4
MsG0280007849.01.T03 MTR_3g108560 33.493 209 111 9 2 195 103 298 1.02e-17 81.6
MsG0280007849.01.T03 MTR_7g034090 37.857 140 78 4 123 254 148 286 1.45e-17 82.4
MsG0280007849.01.T03 MTR_3g106960 32.768 177 102 4 94 256 1 174 1.47e-17 80.1
MsG0280007849.01.T03 MTR_2g007090 34.826 201 102 9 63 253 85 266 1.66e-17 80.9
MsG0280007849.01.T03 MTR_3g110010 36.041 197 103 8 47 222 228 422 2.98e-17 82.0
MsG0280007849.01.T03 MTR_5g045510 30.802 237 120 9 35 253 129 339 9.87e-17 79.7
MsG0280007849.01.T03 MTR_5g033200 34.028 144 86 4 116 256 12 149 1.19e-16 76.3
MsG0280007849.01.T03 MTR_1377s0010 34.127 126 77 3 131 253 5 127 2.11e-16 74.3
MsG0280007849.01.T03 MTR_3g071790 27.979 193 112 8 73 247 19 202 3.36e-16 75.5
MsG0280007849.01.T03 MTR_3g113785 43.158 95 41 2 156 243 4 92 1.32e-15 71.2
MsG0280007849.01.T03 MTR_5g076150 35.377 212 99 10 39 218 22 227 1.54e-15 74.3
MsG0280007849.01.T03 MTR_7g007370 34.328 201 108 8 67 252 125 316 1.72e-15 75.9
MsG0280007849.01.T03 MTR_3g094980 34.821 112 67 3 146 253 8 117 2.57e-15 72.4
MsG0280007849.01.T03 MTR_3g113770 28.959 221 96 8 30 243 168 334 9.06e-15 73.6
MsG0280007849.01.T03 MTR_1g043170 51.562 64 30 1 203 265 8 71 1.38e-14 68.2
MsG0280007849.01.T03 MTR_5g039490 28.571 259 138 9 11 257 124 347 2.37e-14 72.8
MsG0280007849.01.T03 MTR_7g056417 40.541 148 70 8 41 171 10 156 3.61e-14 68.9
MsG0280007849.01.T03 MTR_2g007610 32.117 137 74 4 144 272 12 137 4.48e-13 66.2
MsG0280007849.01.T03 MTR_1g085120 35.862 145 76 6 66 195 327 469 6.03e-13 68.9
MsG0280007849.01.T03 MTR_1g108820 35.829 187 88 10 33 195 121 299 1.22e-12 67.4
MsG0280007849.01.T03 MTR_5g008910 43.836 73 38 1 193 265 213 282 3.41e-12 65.9
MsG0280007849.01.T03 MTR_4g096730 50.943 53 26 0 207 259 13 65 5.05e-12 61.6
MsG0280007849.01.T03 MTR_5g024060 33.673 98 64 1 156 253 82 178 4.07e-11 62.4
MsG0280007849.01.T01 MTR_7g033915 54.000 250 54 5 1 190 97 345 6.39e-77 235
MsG0280007849.01.T01 MTR_7g034120 49.643 280 58 5 1 201 24 299 8.70e-72 220
MsG0280007849.01.T01 MTR_7g033990 43.866 269 70 9 1 190 97 363 8.47e-57 185
MsG0280007849.01.T01 MTR_5g012840 40.756 238 86 5 1 190 69 299 8.85e-41 140
MsG0280007849.01.T01 MTR_7g034110 39.367 221 87 7 1 178 94 310 6.30e-35 126
MsG0280007849.01.T01 MTR_7g034115 35.926 270 90 10 1 190 97 363 2.30e-33 123
MsG0280007849.01.T01 MTR_1g041245 33.692 279 87 9 1 190 97 366 9.88e-32 118
MsG0280007849.01.T01 MTR_7g032380 35.510 245 97 8 1 190 98 336 8.14e-29 110
MsG0280007849.01.T01 MTR_7g032370 33.083 266 93 8 1 190 76 332 1.34e-27 107
MsG0280007849.01.T01 MTR_8g085430 35.526 228 85 9 1 190 105 308 6.67e-25 99.8
MsG0280007849.01.T01 MTR_7g056433 33.696 276 89 13 3 190 100 369 1.57e-24 99.4
MsG0280007849.01.T01 MTR_7g098510 30.175 285 105 12 3 200 104 381 2.96e-24 98.6
MsG0280007849.01.T01 MTR_7g088260 28.986 276 103 7 1 190 175 443 4.03e-24 99.0
MsG0280007849.01.T01 MTR_3g467400 37.561 205 91 8 17 190 149 347 1.91e-23 96.3
MsG0280007849.01.T01 MTR_3g087260 38.095 189 58 8 59 190 251 437 3.84e-22 93.2
MsG0280007849.01.T01 MTR_7g033945 80.000 55 11 0 1 55 97 151 4.69e-22 89.0
MsG0280007849.01.T01 MTR_2g020180 46.667 105 53 3 89 190 94 198 1.59e-21 88.2
MsG0280007849.01.T01 MTR_7g056420 31.227 269 101 13 1 197 95 351 9.23e-21 90.1
MsG0280007849.01.T01 MTR_7g056430 31.227 269 101 13 1 197 95 351 1.04e-20 89.7
MsG0280007849.01.T01 MTR_0492s0020 29.615 260 108 7 4 190 173 430 1.71e-20 88.6
MsG0280007849.01.T01 MTR_0543s0010 29.615 260 108 7 4 190 173 430 2.28e-20 88.2
MsG0280007849.01.T01 MTR_7g115270 28.283 297 110 11 3 200 100 392 3.81e-20 87.4
MsG0280007849.01.T01 MTR_7g098570 29.474 285 107 10 4 201 107 384 1.26e-19 86.3
MsG0280007849.01.T01 MTR_3g108560 29.851 268 104 8 4 190 105 369 2.52e-19 85.1
MsG0280007849.01.T01 MTR_3g109982 33.511 188 66 6 60 190 270 455 6.85e-19 84.3
MsG0280007849.01.T01 MTR_3g113770 34.503 171 76 7 30 168 168 334 9.23e-19 82.8
MsG0280007849.01.T01 MTR_3g107100 31.016 187 71 4 51 180 173 358 5.18e-18 81.3
MsG0280007849.01.T01 MTR_7g081290 50.746 67 32 1 124 190 174 239 1.43e-17 78.6
MsG0280007849.01.T01 MTR_3g115430 54.688 64 28 1 128 190 45 108 4.70e-16 71.6
MsG0280007849.01.T01 MTR_7g098480 29.044 272 103 12 3 190 104 369 8.89e-16 75.1
MsG0280007849.01.T01 MTR_5g008950 30.601 183 66 6 63 189 167 344 1.74e-15 73.9
MsG0280007849.01.T01 MTR_1g043170 51.562 64 30 1 128 190 8 71 2.49e-15 68.6
MsG0280007849.01.T01 MTR_3g082890 32.544 169 95 7 37 190 303 467 6.55e-15 72.8
MsG0280007849.01.T01 MTR_5g045510 28.723 188 80 7 37 178 160 339 9.52e-15 72.0
MsG0280007849.01.T01 MTR_3g082890 55.000 60 26 1 132 190 365 424 9.82e-15 72.0
MsG0280007849.01.T01 MTR_7g056020 33.171 205 71 8 48 192 158 356 2.81e-14 70.9
MsG0280007849.01.T01 MTR_3g108150 25.725 276 112 7 3 190 97 367 9.40e-14 69.3
MsG0280007849.01.T01 MTR_5g054920 28.272 191 78 4 56 190 2 189 1.03e-13 67.0
MsG0280007849.01.T01 MTR_3g036250 25.271 277 119 9 1 200 91 356 1.11e-13 68.9
MsG0280007849.01.T01 MTR_3g023630 26.103 272 120 9 4 200 99 364 2.39e-13 67.8
MsG0280007849.01.T01 MTR_5g013500 29.137 278 114 14 2 200 82 355 5.54e-13 67.0
MsG0280007849.01.T01 MTR_5g008910 45.714 70 35 1 121 190 216 282 7.23e-13 66.2
MsG0280007849.01.T01 MTR_3g107940 63.043 46 17 0 132 177 143 188 7.77e-13 66.2
MsG0280007849.01.T01 MTR_4g096730 50.943 53 26 0 132 184 13 65 1.19e-12 62.0
MsG0280007849.01.T01 MTR_4g080610 29.592 196 74 5 57 190 145 338 1.78e-12 65.5
MsG0280007849.01.T01 MTR_3g095600 31.081 148 84 6 56 197 152 287 2.86e-12 64.3
MsG0280007849.01.T01 MTR_5g008920 46.269 67 33 2 125 189 295 360 1.05e-11 63.2
MsG0280007849.01.T01 MTR_2g007450 49.057 53 27 0 126 178 340 392 4.54e-11 61.6
MsG0280007849.01.T01 MTR_3g113785 60.526 38 15 0 134 171 58 95 8.21e-11 57.0
MsG0280007849.01.T02 MTR_7g033915 55.600 250 55 4 1 195 97 345 4.75e-84 253
MsG0280007849.01.T02 MTR_5g012840 45.902 244 91 4 1 206 69 309 1.36e-59 189
MsG0280007849.01.T02 MTR_7g033990 69.841 126 36 2 71 195 239 363 4.41e-58 188
MsG0280007849.01.T02 MTR_7g034110 48.869 221 71 4 1 183 94 310 1.67e-55 180
MsG0280007849.01.T02 MTR_7g034120 61.029 136 48 2 71 206 169 299 4.50e-47 157
MsG0280007849.01.T02 MTR_7g034120 82.667 75 13 0 1 75 24 98 4.94e-34 123
MsG0280007849.01.T02 MTR_7g032380 39.184 245 93 5 1 195 98 336 1.02e-44 152
MsG0280007849.01.T02 MTR_8g085430 41.784 213 97 6 1 195 105 308 6.47e-40 139
MsG0280007849.01.T02 MTR_7g034115 55.556 117 49 2 82 195 247 363 9.47e-37 132
MsG0280007849.01.T02 MTR_7g032370 53.719 121 52 2 79 195 212 332 3.12e-36 130
MsG0280007849.01.T02 MTR_1g041245 45.963 161 63 5 40 195 225 366 1.43e-35 129
MsG0280007849.01.T02 MTR_7g056433 44.512 164 84 4 37 195 208 369 3.01e-35 128
MsG0280007849.01.T02 MTR_7g033945 77.632 76 17 0 1 76 97 172 1.05e-32 116
MsG0280007849.01.T02 MTR_2g020180 50.847 118 45 3 82 195 90 198 6.17e-31 112
MsG0280007849.01.T02 MTR_7g081290 47.899 119 56 3 82 195 122 239 2.20e-30 112
MsG0280007849.01.T02 MTR_7g115270 49.593 123 57 3 86 205 272 392 8.02e-30 114
MsG0280007849.01.T02 MTR_7g088260 47.934 121 55 3 81 195 325 443 8.62e-28 109
MsG0280007849.01.T02 MTR_0492s0020 43.939 132 61 5 74 195 302 430 1.17e-27 108
MsG0280007849.01.T02 MTR_0543s0010 43.939 132 61 5 74 195 302 430 1.61e-27 108
MsG0280007849.01.T02 MTR_7g098510 39.247 186 94 9 38 206 199 382 1.83e-27 107
MsG0280007849.01.T02 MTR_3g115430 50.459 109 48 3 92 195 1 108 7.20e-27 99.8
MsG0280007849.01.T02 MTR_7g056430 47.059 136 65 5 73 202 217 351 1.92e-26 106
MsG0280007849.01.T02 MTR_7g056420 47.059 136 65 5 73 202 217 351 2.22e-26 106
MsG0280007849.01.T02 MTR_5g008950 44.348 115 56 4 85 194 233 344 1.35e-24 99.8
MsG0280007849.01.T02 MTR_3g082890 47.500 120 57 3 82 195 348 467 1.49e-24 100
MsG0280007849.01.T02 MTR_5g013500 47.107 121 62 2 87 205 235 355 3.11e-24 98.6
MsG0280007849.01.T02 MTR_3g108150 43.243 148 73 5 59 195 220 367 6.27e-24 97.8
MsG0280007849.01.T02 MTR_3g087260 45.000 140 68 5 64 195 299 437 1.42e-23 97.4
MsG0280007849.01.T02 MTR_3g107940 37.912 182 84 4 4 182 33 188 2.00e-23 95.9
MsG0280007849.01.T02 MTR_7g098570 42.636 129 68 5 82 206 258 384 1.97e-22 94.4
MsG0280007849.01.T02 MTR_3g108560 46.154 117 53 4 86 195 256 369 2.11e-22 93.6
MsG0280007849.01.T02 MTR_3g036250 40.157 127 71 3 82 206 234 357 3.82e-22 92.8
MsG0280007849.01.T02 MTR_7g098480 37.580 157 84 7 62 206 226 380 7.94e-22 92.8
MsG0280007849.01.T02 MTR_3g107100 40.458 131 64 4 66 185 231 358 9.90e-22 92.0
MsG0280007849.01.T02 MTR_2g007450 45.714 105 47 2 83 183 294 392 1.43e-21 91.7
MsG0280007849.01.T02 MTR_4g080610 42.017 119 60 3 86 195 220 338 1.08e-20 88.6
MsG0280007849.01.T02 MTR_7g056020 45.378 119 58 3 86 197 238 356 1.14e-20 89.7
MsG0280007849.01.T02 MTR_3g082890 35.669 157 58 5 82 195 268 424 2.42e-20 88.2
MsG0280007849.01.T02 MTR_3g107120 36.667 150 71 6 67 203 240 378 2.71e-20 87.8
MsG0280007849.01.T02 MTR_3g109982 44.444 117 56 4 86 195 341 455 5.39e-20 87.8
MsG0280007849.01.T02 MTR_5g054920 28.846 156 102 3 48 195 35 189 1.27e-19 82.8
MsG0280007849.01.T02 MTR_5g008920 40.157 127 69 5 73 194 236 360 1.56e-19 85.9
MsG0280007849.01.T02 MTR_7g056280 34.194 155 75 5 65 201 413 558 2.78e-19 85.5
MsG0280007849.01.T02 MTR_7g034090 35.079 191 89 9 13 184 112 286 2.78e-18 82.4
MsG0280007849.01.T02 MTR_6g022500 37.607 117 71 1 86 202 348 462 1.51e-17 80.5
MsG0280007849.01.T02 MTR_7g083740 37.273 110 51 3 83 183 237 337 1.66e-17 80.1
MsG0280007849.01.T02 MTR_2g007550 38.889 108 57 3 81 185 212 313 2.23e-17 79.3
MsG0280007849.01.T02 MTR_7g021990 38.938 113 63 3 75 183 282 392 2.88e-17 79.7
MsG0280007849.01.T02 MTR_7g021950 38.596 114 64 3 74 183 281 392 3.70e-17 79.3
MsG0280007849.01.T02 MTR_3g107160 39.252 107 60 2 82 186 256 359 4.64e-17 79.0
MsG0280007849.01.T02 MTR_3g023630 41.129 124 65 6 86 206 247 365 5.57e-17 78.6
MsG0280007849.01.T02 MTR_1g053025 37.255 102 53 3 86 183 267 361 6.99e-17 78.2
MsG0280007849.01.T02 MTR_5g045170 39.796 98 57 2 86 183 263 358 7.55e-17 78.2
MsG0280007849.01.T02 MTR_3g106960 34.932 146 78 5 55 186 32 174 8.87e-17 76.3
MsG0280007849.01.T02 MTR_3g467400 64.912 57 19 1 140 195 291 347 9.87e-17 77.8
MsG0280007849.01.T02 MTR_3g040700 40.404 99 58 1 82 179 272 370 1.12e-16 77.8
MsG0280007849.01.T02 MTR_7g022105 37.500 136 75 4 49 183 267 393 1.20e-16 77.8
MsG0280007849.01.T02 MTR_6g029350 38.235 102 53 4 86 183 75 170 1.51e-16 75.5
MsG0280007849.01.T02 MTR_1377s0010 38.235 102 60 2 82 183 29 127 2.00e-16 73.2
MsG0280007849.01.T02 MTR_7g056277 38.462 104 61 2 83 186 498 598 3.30e-16 76.6
MsG0280007849.01.T02 MTR_3g113785 43.158 95 41 2 86 173 4 92 3.44e-16 71.2
MsG0280007849.01.T02 MTR_5g007410 32.576 132 81 3 54 184 252 376 3.74e-16 76.3
MsG0280007849.01.T02 MTR_5g033200 34.513 113 70 2 74 186 41 149 6.62e-16 72.8
MsG0280007849.01.T02 MTR_7g114710 36.434 129 63 4 77 193 223 344 9.85e-16 74.7
MsG0280007849.01.T02 MTR_3g094980 34.821 112 67 3 76 183 8 117 1.21e-15 72.0
MsG0280007849.01.T02 MTR_6g045333 35.577 104 66 1 81 183 310 413 1.37e-15 74.7
MsG0280007849.01.T02 MTR_7g007080 37.405 131 65 5 66 183 227 353 1.90e-15 74.3
MsG0280007849.01.T02 MTR_7g026500 35.294 102 65 1 85 186 267 367 2.10e-15 73.9
MsG0280007849.01.T02 MTR_7g060470 37.705 122 62 5 75 189 253 367 2.11e-15 73.9
MsG0280007849.01.T02 MTR_3g071850 35.455 110 64 2 81 186 273 379 2.57e-15 74.3
MsG0280007849.01.T02 MTR_1g043170 51.562 64 30 1 133 195 8 71 3.45e-15 68.6
MsG0280007849.01.T02 MTR_6g040270 34.167 120 72 4 86 202 252 367 4.35e-15 73.2
MsG0280007849.01.T02 MTR_2g005990 38.333 120 57 6 75 183 254 367 5.81e-15 72.8
MsG0280007849.01.T02 MTR_4g098590 36.364 110 60 2 78 183 251 354 8.99e-15 72.0
MsG0280007849.01.T02 MTR_0009s0080 35.714 98 63 0 86 183 270 367 9.70e-15 72.4
MsG0280007849.01.T02 MTR_6g022520 33.333 117 76 1 86 202 185 299 9.87e-15 71.6
MsG0280007849.01.T02 MTR_3g105060 38.211 123 61 4 71 189 239 350 1.09e-14 72.0
MsG0280007849.01.T02 MTR_1g107385 34.109 129 71 3 63 183 273 395 1.58e-14 71.6
MsG0280007849.01.T02 MTR_5g073370 39.200 125 57 5 70 186 237 350 1.82e-14 71.2
MsG0280007849.01.T02 MTR_3g026920 39.423 104 53 3 83 183 285 381 2.89e-14 70.9
MsG0280007849.01.T02 MTR_7g056287 37.500 104 62 2 83 186 242 342 4.51e-14 70.1
MsG0280007849.01.T02 MTR_6g022360 37.037 108 64 2 81 186 273 378 5.49e-14 70.1
MsG0280007849.01.T02 MTR_4g039440 34.862 109 69 1 83 191 278 384 1.03e-13 69.3
MsG0280007849.01.T02 MTR_1g066830 33.058 121 76 4 72 191 245 361 1.18e-13 68.9
MsG0280007849.01.T02 MTR_1g108820 42.169 83 43 2 104 186 278 355 1.42e-13 68.9
MsG0280007849.01.T02 MTR_2g007610 33.065 124 68 3 83 202 25 137 2.64e-13 65.5
MsG0280007849.01.T02 MTR_2g036470 39.506 81 48 1 108 187 287 367 2.86e-13 67.8
MsG0280007849.01.T02 MTR_5g073420 34.951 103 63 3 81 183 246 344 4.66e-13 67.4
MsG0280007849.01.T02 MTR_3g095630 33.010 103 65 2 81 183 53 151 4.90e-13 65.1
MsG0280007849.01.T02 MTR_3g099830 33.333 147 72 7 60 186 209 349 8.14e-13 66.6
MsG0280007849.01.T02 MTR_1g085120 32.773 119 78 1 83 201 415 531 8.97e-13 66.6
MsG0280007849.01.T02 MTR_1g085120 32.773 119 78 1 83 201 340 456 1.02e-12 66.6
MsG0280007849.01.T02 MTR_3g113770 47.619 63 28 1 116 173 272 334 1.05e-12 66.2
MsG0280007849.01.T02 MTR_5g008910 54.545 55 22 1 141 195 231 282 1.59e-12 65.5
MsG0280007849.01.T02 MTR_4g096730 50.943 53 26 0 137 189 13 65 2.57e-12 61.2
MsG0280007849.01.T02 MTR_6g011460 30.688 189 100 5 2 187 229 389 3.32e-12 65.1
MsG0280007849.01.T02 MTR_1089s0010 36.634 101 60 2 86 186 250 346 3.41e-12 64.7
MsG0280007849.01.T02 MTR_7g055943 37.383 107 59 2 86 186 287 391 4.09e-12 64.7
MsG0280007849.01.T02 MTR_5g058000 34.146 123 72 4 81 203 243 356 6.79e-12 63.9
MsG0280007849.01.T02 MTR_5g083890 31.298 131 74 3 63 183 250 374 1.09e-11 63.5
MsG0280007849.01.T02 MTR_5g024060 32.673 101 67 1 83 183 79 178 1.17e-11 62.4
MsG0280007849.01.T02 MTR_5g063950 32.787 122 77 2 67 183 208 329 1.42e-11 62.8
MsG0280007849.01.T02 MTR_5g031970 35.922 103 61 3 86 187 229 327 4.03e-11 61.6
MsG0280007849.01.T02 MTR_1g108800 41.860 86 45 2 103 188 234 314 6.55e-11 60.8
MsG0280007849.01.T02 MTR_5g058100 32.075 106 68 3 81 186 252 353 8.75e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007849.01.T03 AT5G56370 29.276 304 155 14 4 256 89 383 5.05e-16 77.8
MsG0280007849.01.T03 AT5G56370 29.276 304 155 14 4 256 89 383 5.05e-16 77.8

Find 36 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATGAAATAGAGTTTAA+AGG 0.196996 2:-21772596 MsG0280007849.01.T03:CDS
GTTTAAAGGTTTATCCAATT+TGG 0.229609 2:-21772582 MsG0280007849.01.T03:CDS
AGTTGAGAGGAAATGCATTT+TGG 0.234400 2:+21772284 None:intergenic
GCATTACAAATCCAAGAAAA+TGG 0.242682 2:+21772524 None:intergenic
AGCTTATATTTGAATCAAAT+TGG 0.245379 2:-21772433 MsG0280007849.01.T03:CDS
CTTACTATTGATCAGCTTCA+TGG 0.291056 2:-21772353 MsG0280007849.01.T03:CDS
ACTACTCAAAACTCTCCATT+TGG 0.366329 2:-21772717 MsG0280007849.01.T03:CDS
TTGAAGACACTTGAAATTGT+AGG 0.383409 2:+21772812 None:intergenic
GAATTACAAACCATTGATAT+AGG 0.384555 2:-21772632 MsG0280007849.01.T03:CDS
GGTTTGTAATTCCTCTAGAA+TGG 0.389790 2:+21772643 None:intergenic
AATGTCGGCTCTTACCAAAT+TGG 0.400838 2:+21772568 None:intergenic
AATCAAATTGGCGTACCAAC+TGG 0.402300 2:-21772421 MsG0280007849.01.T03:CDS
CGACGAGGAGGACGATTGTA+AGG 0.447472 2:-21772321 MsG0280007849.01.T03:CDS
GCTCCATGTGAGTTAAGTTA+TGG 0.448971 2:+21772453 None:intergenic
ATATAAAGCACCAAAATGTC+TGG 0.453093 2:-21772139 MsG0280007849.01.T03:CDS
GTTTGTAATTCCTCTAGAAT+GGG 0.459695 2:+21772644 None:intergenic
AAAAGAAAACGCAATCCAAA+TGG 0.487368 2:+21772702 None:intergenic
TGCTCACTTACATCTTATAG+AGG 0.512275 2:-21772254 MsG0280007849.01.T03:CDS
AGAGCCGACATTTCTAACCT+TGG 0.520788 2:-21772557 MsG0280007849.01.T03:CDS
CAAGTGTCTTCAATTGCGGC+AGG 0.521075 2:-21772802 MsG0280007849.01.T03:CDS
ATTGATCAGCTTCATGGACA+TGG 0.542256 2:-21772347 MsG0280007849.01.T03:CDS
CGAACCAAGGTTAGAAATGT+CGG 0.553005 2:+21772553 None:intergenic
ATTGGCGTACCAACTGGAAG+TGG 0.558535 2:-21772415 MsG0280007849.01.T03:CDS
ACTTCAATTTAAGAAATACA+AGG 0.562635 2:+21772777 None:intergenic
AAAGTTTCTACGAGTAAGAC+TGG 0.567719 2:-21772501 MsG0280007849.01.T03:CDS
ATTTCAAGTGTCTTCAATTG+CGG 0.587477 2:-21772806 MsG0280007849.01.T03:CDS
TTTCCATAACTTAACTCACA+TGG 0.606554 2:-21772456 MsG0280007849.01.T03:CDS
TTCTACCGACCACTTCCAGT+TGG 0.609341 2:+21772406 None:intergenic
AAAATGGAATATTCGAACCA+AGG 0.623331 2:+21772540 None:intergenic
TGAGCATGTTCTAAGTTGAG+AGG 0.626444 2:+21772271 None:intergenic
TAGCGATGCACTAATCGTCA+TGG 0.628601 2:+21772172 None:intergenic
AGAAGGATGTCCCATTCTAG+AGG 0.641592 2:-21772654 MsG0280007849.01.T03:CDS
GTATATTATGAAGAATGCAA+AGG 0.650373 2:-21772204 MsG0280007849.01.T03:CDS
GCGTACCAACTGGAAGTGGT+CGG 0.670000 2:-21772411 MsG0280007849.01.T03:CDS
TGGACATGGAATCGACGAGG+AGG 0.680858 2:-21772333 MsG0280007849.01.T03:CDS
TCATGGACATGGAATCGACG+AGG 0.751447 2:-21772336 MsG0280007849.01.T03:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATGAAATAGAGTTTAA+AGG - Chr2:21772436-21772455 MsG0280007849.01.T03:CDS 20.0%
!! ACTTCAATTTAAGAAATACA+AGG + Chr2:21772258-21772277 None:intergenic 20.0%
!! AGCTTATATTTGAATCAAAT+TGG - Chr2:21772599-21772618 MsG0280007849.01.T03:CDS 20.0%
!!! GATTTTAATAAGCTTATAGA+AGG - Chr2:21772361-21772380 MsG0280007849.01.T03:CDS 20.0%
! CAACAAAAATCCTATATCAA+TGG + Chr2:21772413-21772432 None:intergenic 25.0%
! GAATTACAAACCATTGATAT+AGG - Chr2:21772400-21772419 MsG0280007849.01.T03:CDS 25.0%
! GTATATTATGAAGAATGCAA+AGG - Chr2:21772828-21772847 MsG0280007849.01.T03:CDS 25.0%
! GTTTAAAGGTTTATCCAATT+TGG - Chr2:21772450-21772469 MsG0280007849.01.T03:CDS 25.0%
!!! ATAGTAAGATTTTGAAGCTT+AGG + Chr2:21772667-21772686 None:intergenic 25.0%
!!! ATGCATTTTGGAACAATTTT+TGG + Chr2:21772739-21772758 None:intergenic 25.0%
!!! TAGTAAGATTTTGAAGCTTA+GGG + Chr2:21772666-21772685 None:intergenic 25.0%
AAAAGAAAACGCAATCCAAA+TGG + Chr2:21772333-21772352 None:intergenic 30.0%
AAAATGGAATATTCGAACCA+AGG + Chr2:21772495-21772514 None:intergenic 30.0%
AATGTCTATCAGTAGAAACT+AGG - Chr2:21772921-21772940 MsG0280007849.01.T03:CDS 30.0%
GCATTACAAATCCAAGAAAA+TGG + Chr2:21772511-21772530 None:intergenic 30.0%
TTGAAGACACTTGAAATTGT+AGG + Chr2:21772223-21772242 None:intergenic 30.0%
TTTCCATAACTTAACTCACA+TGG - Chr2:21772576-21772595 MsG0280007849.01.T03:CDS 30.0%
! ACATTTTTCTCCAGACATTT+TGG + Chr2:21772906-21772925 None:intergenic 30.0%
! ATATAAAGCACCAAAATGTC+TGG - Chr2:21772893-21772912 MsG0280007849.01.T03:CDS 30.0%
! ATTTCAAGTGTCTTCAATTG+CGG - Chr2:21772226-21772245 MsG0280007849.01.T03:CDS 30.0%
! GTTCGAATATTCCATTTTCT+TGG - Chr2:21772497-21772516 MsG0280007849.01.T03:CDS 30.0%
!! GTTTGTAATTCCTCTAGAAT+GGG + Chr2:21772391-21772410 None:intergenic 30.0%
!!! ATTCCTTTTTTTACAGCAAC+AGG + Chr2:21772142-21772161 None:intergenic 30.0%
AAAGTTTCTACGAGTAAGAC+TGG - Chr2:21772531-21772550 MsG0280007849.01.T03:CDS 35.0%
ACTACTCAAAACTCTCCATT+TGG - Chr2:21772315-21772334 MsG0280007849.01.T03:CDS 35.0%
CTTACTATTGATCAGCTTCA+TGG - Chr2:21772679-21772698 MsG0280007849.01.T03:CDS 35.0%
GTTCCTGTTGCTGTAAAAAA+AGG - Chr2:21772136-21772155 MsG0280007849.01.T03:CDS 35.0%
TGCTCACTTACATCTTATAG+AGG - Chr2:21772778-21772797 MsG0280007849.01.T03:CDS 35.0%
! AGTTGAGAGGAAATGCATTT+TGG + Chr2:21772751-21772770 None:intergenic 35.0%
! GGTTTGTAATTCCTCTAGAA+TGG + Chr2:21772392-21772411 None:intergenic 35.0%
!!! AAATGGAGAGTTTTGAGTAG+TGG + Chr2:21772316-21772335 None:intergenic 35.0%
AATCAAATTGGCGTACCAAC+TGG - Chr2:21772611-21772630 MsG0280007849.01.T03:CDS 40.0%
ATTGATCAGCTTCATGGACA+TGG - Chr2:21772685-21772704 MsG0280007849.01.T03:CDS 40.0%
CGAACCAAGGTTAGAAATGT+CGG + Chr2:21772482-21772501 None:intergenic 40.0%
GCTCCATGTGAGTTAAGTTA+TGG + Chr2:21772582-21772601 None:intergenic 40.0%
! TGAGCATGTTCTAAGTTGAG+AGG + Chr2:21772764-21772783 None:intergenic 40.0%
!! AATGTCGGCTCTTACCAAAT+TGG + Chr2:21772467-21772486 None:intergenic 40.0%
AGAAGGATGTCCCATTCTAG+AGG - Chr2:21772378-21772397 MsG0280007849.01.T03:CDS 45.0%
AGAGCCGACATTTCTAACCT+TGG - Chr2:21772475-21772494 MsG0280007849.01.T03:CDS 45.0%
TAGCGATGCACTAATCGTCA+TGG + Chr2:21772863-21772882 None:intergenic 45.0%
ATTGGCGTACCAACTGGAAG+TGG - Chr2:21772617-21772636 MsG0280007849.01.T03:CDS 50.0%
CAAGTGTCTTCAATTGCGGC+AGG - Chr2:21772230-21772249 MsG0280007849.01.T03:CDS 50.0%
TCATGGACATGGAATCGACG+AGG - Chr2:21772696-21772715 MsG0280007849.01.T03:CDS 50.0%
TTCTACCGACCACTTCCAGT+TGG + Chr2:21772629-21772648 None:intergenic 50.0%
CGACGAGGAGGACGATTGTA+AGG - Chr2:21772711-21772730 MsG0280007849.01.T03:CDS 55.0%
GCGTACCAACTGGAAGTGGT+CGG - Chr2:21772621-21772640 MsG0280007849.01.T03:CDS 55.0%
TGGACATGGAATCGACGAGG+AGG - Chr2:21772699-21772718 MsG0280007849.01.T03:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 21772112 21772942 21772112 ID=MsG0280007849.01;Name=MsG0280007849.01
Chr2 mRNA 21772112 21772942 21772112 ID=MsG0280007849.01.T01;Parent=MsG0280007849.01;Name=MsG0280007849.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|3|0|201
Chr2 exon 21772112 21772360 21772112 ID=MsG0280007849.01.T01:exon:2848;Parent=MsG0280007849.01.T01
Chr2 exon 21772502 21772694 21772502 ID=MsG0280007849.01.T01:exon:2847;Parent=MsG0280007849.01.T01
Chr2 exon 21772779 21772942 21772779 ID=MsG0280007849.01.T01:exon:2846;Parent=MsG0280007849.01.T01
Chr2 CDS 21772779 21772942 21772779 ID=MsG0280007849.01.T01:cds;Parent=MsG0280007849.01.T01
Chr2 CDS 21772502 21772694 21772502 ID=MsG0280007849.01.T01:cds;Parent=MsG0280007849.01.T01
Chr2 CDS 21772112 21772360 21772112 ID=MsG0280007849.01.T01:cds;Parent=MsG0280007849.01.T01
Chr2 mRNA 21772112 21772942 21772112 ID=MsG0280007849.01.T02;Parent=MsG0280007849.01;Name=MsG0280007849.01.T02;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|206
Chr2 exon 21772112 21772505 21772112 ID=MsG0280007849.01.T02:exon:2850;Parent=MsG0280007849.01.T02
Chr2 exon 21772716 21772942 21772716 ID=MsG0280007849.01.T02:exon:2849;Parent=MsG0280007849.01.T02
Chr2 CDS 21772716 21772942 21772716 ID=MsG0280007849.01.T02:cds;Parent=MsG0280007849.01.T02
Chr2 CDS 21772112 21772505 21772112 ID=MsG0280007849.01.T02:cds;Parent=MsG0280007849.01.T02
Chr2 mRNA 21772112 21772942 21772112 ID=MsG0280007849.01.T03;Parent=MsG0280007849.01;Name=MsG0280007849.01.T03;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|276
Chr2 exon 21772112 21772942 21772112 ID=MsG0280007849.01.T03:exon:2851;Parent=MsG0280007849.01.T03
Chr2 CDS 21772112 21772942 21772112 ID=MsG0280007849.01.T03:cds;Parent=MsG0280007849.01.T03
Chr2 mRNA 21772112 21772459 21772112 ID=MsG0280007849.01.T04;Parent=MsG0280007849.01;Name=MsG0280007849.01.T04;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|115
Chr2 exon 21772112 21772459 21772112 ID=MsG0280007849.01.T04:exon:2852;Parent=MsG0280007849.01.T04
Chr2 CDS 21772112 21772459 21772112 ID=MsG0280007849.01.T04:cds;Parent=MsG0280007849.01.T04
Gene Sequence

>MsG0280007849.01.T04

ATGGAGCTTATATTTGAATCAAATTGGCGTACCAACTGGAAGTGGTCGGTAGAATTGCTTGAACATTGCCCTAAGCTTCAAAATCTTACTATTGATCAGCTTCATGGACATGGAATCGACGAGGAGGACGATTGTAAGGAACCAAAAATTGTTCCAAAATGCATTTCCTCTCAACTTAGAACATGCTCACTTACATCTTATAGAGGTATGAAGTGTGAGCTTCAGTTTGCAAAGTATATTATGAAGAATGCAAAGGTAATGCGCACCATGACGATTAGTGCATCGCTAGTTGATATAAATATAAAGCACCAAAATGTCTGGAGAAAAATGTCTATCAGTAGAAACTAG

>MsG0280007849.01.T03

GATTCACAGGATATCAATCTATTTGTTCCTGTTGCTGTAAAAAAAGGAATTGAGAATCTCATCTTAGATTTTATCGACGCTGATCATAATTTTCTAATCAGATTACGTCCTACAATTTCAAGTGTCTTCAATTGCGGCAGGAACCTTGTATTTCTTAAATTGAAGTTTGTAATAGTGATTGTTGTTGCTCAATTTGATTTTCCACTACTCAAAACTCTCCATTTGGATTGCGTTTTCTTTTTGCGAAGAGATTTTAATAAGCTTATAGAAGGATGTCCCATTCTAGAGGAATTACAAACCATTGATATAGGATTTTTGTTGTCAAATGATGAAATAGAGTTTAAAGGTTTATCCAATTTGGTAAGAGCCGACATTTCTAACCTTGGTTCGAATATTCCATTTTCTTGGATTTGTAATGCAAAGTTTCTACGAGTAAGACTGGATGAAGAGCAACAAGTTCACACTTTCCATAACTTAACTCACATGGAGCTTATATTTGAATCAAATTGGCGTACCAACTGGAAGTGGTCGGTAGAATTGCTTGAACATTGCCCTAAGCTTCAAAATCTTACTATTGATCAGCTTCATGGACATGGAATCGACGAGGAGGACGATTGTAAGGAACCAAAAATTGTTCCAAAATGCATTTCCTCTCAACTTAGAACATGCTCACTTACATCTTATAGAGGTATGAAGTGTGAGCTTCAGTTTGCAAAGTATATTATGAAGAATGCAAAGGTAATGCGCACCATGACGATTAGTGCATCGCTAGTTGATATAAATATAAAGCACCAAAATGTCTGGAGAAAAATGTCTATCAGTAGAAACTAG

>MsG0280007849.01.T01

GATTCACAGGATATCAATCTATTTGTTCCTGTTGCTGTAAAAAAAGGAATTGAGAATCTCATCTTAGATTTTATCGACGCTGATCATAATTTTCTAATCAGATTACGTCCTACAATTTCAAGTGTCTTCAATTGCGGCAGGAACCTTGTATTTCTTAAATTGAAAGATTTTAATAAGCTTATAGAAGGATGTCCCATTCTAGAGGAATTACAAACCATTGATATAGGATTTTTGTTGTCAAATGATGAAATAGAGTTTAAAGGTTTATCCAATTTGGTAAGAGCCGACATTTCTAACCTTGGTTCGAATATTCCATTTTCTTGGATTTGTAATGCAAAGTTTCTACGAGTAAGACTGCTTCATGGACATGGAATCGACGAGGAGGACGATTGTAAGGAACCAAAAATTGTTCCAAAATGCATTTCCTCTCAACTTAGAACATGCTCACTTACATCTTATAGAGGTATGAAGTGTGAGCTTCAGTTTGCAAAGTATATTATGAAGAATGCAAAGGTAATGCGCACCATGACGATTAGTGCATCGCTAGTTGATATAAATATAAAGCACCAAAATGTCTGGAGAAAAATGTCTATCAGTAGAAACTAG

>MsG0280007849.01.T02

GATTCACAGGATATCAATCTATTTGTTCCTGTTGCTGTAAAAAAAGGAATTGAGAATCTCATCTTAGATTTTATCGACGCTGATCATAATTTTCTAATCAGATTACGTCCTACAATTTCAAGTGTCTTCAATTGCGGCAGGAACCTTGTATTTCTTAAATTGAAGTTTGTAATAGTGATTGTTGTTGCTCAATTTGATTTTCCACTACTCAAAACTCTCCATTTGGAACTGGATGAAGAGCAACAAGTTCACACTTTCCATAACTTAACTCACATGGAGCTTATATTTGAATCAAATTGGCGTACCAACTGGAAGTGGTCGGTAGAATTGCTTGAACATTGCCCTAAGCTTCAAAATCTTACTATTGATCAGCTTCATGGACATGGAATCGACGAGGAGGACGATTGTAAGGAACCAAAAATTGTTCCAAAATGCATTTCCTCTCAACTTAGAACATGCTCACTTACATCTTATAGAGGTATGAAGTGTGAGCTTCAGTTTGCAAAGTATATTATGAAGAATGCAAAGGTAATGCGCACCATGACGATTAGTGCATCGCTAGTTGATATAAATATAAAGCACCAAAATGTCTGGAGAAAAATGTCTATCAGTAGAAACTAG
Protein sequence

>MsG0280007849.01.T04

MELIFESNWRTNWKWSVELLEHCPKLQNLTIDQLHGHGIDEEDDCKEPKIVPKCISSQLRTCSLTSYRGMKCELQFAKYIMKNAKVMRTMTISASLVDINIKHQNVWRKMSISRN*

>MsG0280007849.01.T03

DSQDINLFVPVAVKKGIENLILDFIDADHNFLIRLRPTISSVFNCGRNLVFLKLKFVIVIVVAQFDFPLLKTLHLDCVFFLRRDFNKLIEGCPILEELQTIDIGFLLSNDEIEFKGLSNLVRADISNLGSNIPFSWICNAKFLRVRLDEEQQVHTFHNLTHMELIFESNWRTNWKWSVELLEHCPKLQNLTIDQLHGHGIDEEDDCKEPKIVPKCISSQLRTCSLTSYRGMKCELQFAKYIMKNAKVMRTMTISASLVDINIKHQNVWRKMSISRN*

>MsG0280007849.01.T01

DSQDINLFVPVAVKKGIENLILDFIDADHNFLIRLRPTISSVFNCGRNLVFLKLKDFNKLIEGCPILEELQTIDIGFLLSNDEIEFKGLSNLVRADISNLGSNIPFSWICNAKFLRVRLLHGHGIDEEDDCKEPKIVPKCISSQLRTCSLTSYRGMKCELQFAKYIMKNAKVMRTMTISASLVDINIKHQNVWRKMSISRN*

>MsG0280007849.01.T02

DSQDINLFVPVAVKKGIENLILDFIDADHNFLIRLRPTISSVFNCGRNLVFLKLKFVIVIVVAQFDFPLLKTLHLELDEEQQVHTFHNLTHMELIFESNWRTNWKWSVELLEHCPKLQNLTIDQLHGHGIDEEDDCKEPKIVPKCISSQLRTCSLTSYRGMKCELQFAKYIMKNAKVMRTMTISASLVDINIKHQNVWRKMSISRN*