AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011351.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011351.01.T01 MTR_3g115430 55.652 115 47 1 46 156 11 125 4.50e-38 126
MsG0280011351.01.T01 MTR_1g043170 65.909 88 29 1 70 156 1 88 7.98e-36 119
MsG0280011351.01.T01 MTR_2g020180 67.470 83 27 0 74 156 133 215 2.04e-35 122
MsG0280011351.01.T01 MTR_7g081290 66.292 89 27 2 69 156 170 256 7.87e-33 117
MsG0280011351.01.T01 MTR_7g081290 69.355 62 17 1 1 60 1 62 3.08e-19 81.6
MsG0280011351.01.T01 MTR_3g082890 46.512 129 62 2 35 156 356 484 1.35e-29 112
MsG0280011351.01.T01 MTR_3g082890 68.657 67 18 2 2 65 80 146 3.00e-20 86.7
MsG0280011351.01.T01 MTR_3g082890 60.440 91 33 1 69 156 351 441 3.75e-29 110
MsG0280011351.01.T01 MTR_3g082890 70.769 65 16 2 4 65 2 66 4.99e-20 85.9
MsG0280011351.01.T01 MTR_3g108140 40.397 151 72 5 11 155 9 147 2.16e-28 103
MsG0280011351.01.T01 MTR_4g134150 78.462 65 10 1 4 68 2 62 1.02e-26 100
MsG0280011351.01.T01 MTR_7g115270 78.333 60 13 0 9 68 5 64 1.62e-26 103
MsG0280011351.01.T01 MTR_7g115270 53.750 80 34 1 77 153 320 399 1.65e-21 89.7
MsG0280011351.01.T01 MTR_7g033915 45.000 120 58 3 43 155 246 364 4.57e-26 101
MsG0280011351.01.T01 MTR_7g033915 65.000 60 21 0 9 68 4 63 2.24e-20 86.3
MsG0280011351.01.T01 MTR_7g056433 55.422 83 34 1 77 156 307 389 1.51e-25 100
MsG0280011351.01.T01 MTR_7g056433 65.079 63 19 1 10 69 3 65 4.63e-19 82.8
MsG0280011351.01.T01 MTR_1g041245 55.208 96 37 3 66 156 292 386 2.16e-25 100
MsG0280011351.01.T01 MTR_1g041245 69.492 59 18 0 10 68 5 63 6.39e-21 87.8
MsG0280011351.01.T01 MTR_7g033990 44.643 112 57 2 43 150 264 374 5.89e-25 99.4
MsG0280011351.01.T01 MTR_7g033990 67.797 59 19 0 10 68 5 63 2.65e-20 86.3
MsG0280011351.01.T01 MTR_2g102690 46.341 123 21 4 41 119 11 132 4.49e-23 88.6
MsG0280011351.01.T01 MTR_7g032380 49.438 89 41 2 71 156 269 356 8.52e-23 92.8
MsG0280011351.01.T01 MTR_7g032380 69.231 65 17 1 4 68 2 63 3.18e-22 91.3
MsG0280011351.01.T01 MTR_7g056447 70.000 60 18 0 10 69 3 62 1.92e-22 90.9
MsG0280011351.01.T01 MTR_7g098510 42.017 119 61 2 46 156 273 391 2.07e-22 92.0
MsG0280011351.01.T01 MTR_7g098510 42.017 119 63 2 3 118 2 117 4.69e-17 77.0
MsG0280011351.01.T01 MTR_7g034115 51.190 84 40 1 71 154 296 378 1.71e-21 89.4
MsG0280011351.01.T01 MTR_7g034115 62.712 59 22 0 10 68 5 63 2.26e-12 63.9
MsG0280011351.01.T01 MTR_7g033945 65.000 60 21 0 9 68 4 63 2.10e-21 85.5
MsG0280011351.01.T01 MTR_5g012840 51.807 83 37 2 76 156 237 318 5.04e-21 87.4
MsG0280011351.01.T01 MTR_7g032370 39.695 131 69 3 35 156 223 352 1.34e-20 86.7
MsG0280011351.01.T01 MTR_7g032370 70.732 41 12 0 28 68 2 42 1.09e-12 64.7
MsG0280011351.01.T01 MTR_1g095750 60.606 66 26 0 4 69 34 99 1.52e-20 82.4
MsG0280011351.01.T01 MTR_3g105060 65.000 60 21 0 10 69 8 67 1.93e-20 86.3
MsG0280011351.01.T01 MTR_3g105060 48.148 81 35 2 79 156 297 373 3.54e-14 68.9
MsG0280011351.01.T01 MTR_3g113782 70.000 60 16 1 3 60 2 61 2.16e-20 80.5
MsG0280011351.01.T01 MTR_0543s0010 41.026 117 61 4 45 155 335 449 3.34e-20 86.3
MsG0280011351.01.T01 MTR_0543s0010 59.677 62 25 0 6 67 76 137 5.23e-17 77.0
MsG0280011351.01.T01 MTR_0543s0010 64.151 53 18 1 11 63 8 59 6.25e-15 71.2
MsG0280011351.01.T01 MTR_7g056420 65.000 60 21 0 10 69 3 62 7.24e-20 85.5
MsG0280011351.01.T01 MTR_7g056420 52.778 72 34 0 79 150 285 356 1.69e-18 81.6
MsG0280011351.01.T01 MTR_7g056430 65.000 60 21 0 10 69 3 62 8.41e-20 85.5
MsG0280011351.01.T01 MTR_7g056430 52.778 72 34 0 79 150 285 356 1.61e-18 81.6
MsG0280011351.01.T01 MTR_7g034110 63.333 60 22 0 9 68 4 63 8.66e-20 84.3
MsG0280011351.01.T01 MTR_3g467400 53.165 79 34 1 81 156 289 367 9.11e-20 84.3
MsG0280011351.01.T01 MTR_3g467400 60.377 53 21 0 16 68 3 55 3.68e-15 71.6
MsG0280011351.01.T01 MTR_7g034120 38.843 121 62 3 43 156 193 308 1.01e-19 83.6
MsG0280011351.01.T01 MTR_8g085430 61.538 65 22 1 4 68 2 63 3.35e-19 82.4
MsG0280011351.01.T01 MTR_8g085430 50.000 76 37 1 72 147 242 316 3.81e-18 79.7
MsG0280011351.01.T01 MTR_7g098480 40.945 127 65 4 33 150 255 380 4.96e-19 83.2
MsG0280011351.01.T01 MTR_7g098480 54.930 71 29 1 3 70 2 72 1.81e-15 72.8
MsG0280011351.01.T01 MTR_3g087260 51.948 77 34 1 82 155 380 456 5.58e-19 82.8
MsG0280011351.01.T01 MTR_3g087260 57.627 59 25 0 10 68 6 64 3.66e-16 74.7
MsG0280011351.01.T01 MTR_7g033940 70.588 51 15 0 18 68 96 146 7.30e-19 80.1
MsG0280011351.01.T01 MTR_5g008950 51.220 82 35 2 78 156 286 365 8.23e-19 82.0
MsG0280011351.01.T01 MTR_5g008950 56.863 51 22 0 18 68 1 51 1.26e-13 67.4
MsG0280011351.01.T01 MTR_3g108150 64.912 57 20 0 11 67 8 64 9.10e-19 82.0
MsG0280011351.01.T01 MTR_3g108150 41.667 84 46 1 75 155 303 386 7.55e-15 70.9
MsG0280011351.01.T01 MTR_5g013500 48.958 96 42 4 66 156 272 365 1.59e-18 80.9
MsG0280011351.01.T01 MTR_7g088260 42.553 94 47 2 70 156 369 462 1.82e-18 81.3
MsG0280011351.01.T01 MTR_7g088260 56.604 53 23 0 15 67 90 142 1.32e-13 67.4
MsG0280011351.01.T01 MTR_3g114200 63.636 66 20 1 3 64 2 67 1.96e-18 77.4
MsG0280011351.01.T01 MTR_7g098570 41.964 112 58 3 45 150 274 384 2.25e-18 81.3
MsG0280011351.01.T01 MTR_7g098570 58.333 60 24 1 11 70 16 74 5.59e-13 65.9
MsG0280011351.01.T01 MTR_5g008910 43.158 95 46 3 66 156 212 302 2.27e-18 80.1
MsG0280011351.01.T01 MTR_7g098590 56.338 71 28 1 3 70 2 72 2.35e-18 76.6
MsG0280011351.01.T01 MTR_5g008920 43.617 94 48 2 66 156 290 381 3.71e-18 80.1
MsG0280011351.01.T01 MTR_5g008920 48.387 62 29 1 10 68 3 64 6.33e-13 65.5
MsG0280011351.01.T01 MTR_3g109982 37.903 124 67 3 29 149 350 466 1.53e-17 79.0
MsG0280011351.01.T01 MTR_3g109982 59.259 54 22 0 15 68 12 65 1.89e-15 72.8
MsG0280011351.01.T01 MTR_0492s0020 59.677 62 25 0 6 67 76 137 5.31e-17 77.0
MsG0280011351.01.T01 MTR_0492s0020 40.777 103 56 3 45 144 335 435 3.58e-16 74.7
MsG0280011351.01.T01 MTR_0492s0020 64.151 53 18 1 11 63 8 59 5.92e-15 71.2
MsG0280011351.01.T01 MTR_3g108560 62.069 58 21 1 11 67 14 71 5.48e-17 76.3
MsG0280011351.01.T01 MTR_3g108560 62.069 58 21 1 11 67 14 71 8.92e-17 76.3
MsG0280011351.01.T01 MTR_3g108560 42.609 115 58 4 47 155 276 388 1.49e-16 75.9
MsG0280011351.01.T01 MTR_3g036250 35.503 169 74 6 13 153 202 363 9.11e-17 76.3
MsG0280011351.01.T01 MTR_3g036250 62.264 53 20 0 16 68 5 57 5.48e-16 73.9
MsG0280011351.01.T01 MTR_7g114710 57.353 68 26 1 1 68 1 65 1.28e-16 75.9
MsG0280011351.01.T01 MTR_7g114710 47.436 78 35 2 82 156 290 364 2.12e-12 63.9
MsG0280011351.01.T01 MTR_2g020170 80.435 46 8 1 16 60 22 67 2.13e-16 71.6
MsG0280011351.01.T01 MTR_4g080610 40.708 113 58 5 52 155 244 356 2.70e-16 74.7
MsG0280011351.01.T01 MTR_3g040700 38.889 108 65 1 11 118 38 144 9.31e-16 73.6
MsG0280011351.01.T01 MTR_3g113770 69.388 49 13 1 70 116 286 334 9.40e-16 73.2
MsG0280011351.01.T01 MTR_3g113785 45.783 83 33 2 46 116 10 92 1.39e-15 68.2
MsG0280011351.01.T01 MTR_3g110010 59.259 54 22 0 15 68 12 65 1.78e-15 72.8
MsG0280011351.01.T01 MTR_3g023630 57.143 56 24 0 12 67 4 59 4.70e-15 71.2
MsG0280011351.01.T01 MTR_3g023630 39.024 82 45 2 69 150 289 365 9.79e-12 62.0
MsG0280011351.01.T01 MTR_1089s0010 42.529 87 48 1 16 102 8 92 3.55e-14 68.9
MsG0280011351.01.T01 MTR_4g096730 45.122 82 37 2 79 156 12 89 5.01e-14 64.3
MsG0280011351.01.T01 MTR_3g107940 41.121 107 49 4 47 150 109 204 1.71e-13 67.0
MsG0280011351.01.T01 MTR_3g107100 65.217 46 16 0 15 60 10 55 1.77e-13 67.0
MsG0280011351.01.T01 MTR_7g056020 34.454 119 71 4 42 156 256 371 2.42e-13 66.6
MsG0280011351.01.T01 MTR_7g026500 54.386 57 26 0 13 69 11 67 4.84e-13 65.9
MsG0280011351.01.T01 MTR_7g026500 35.714 84 49 2 75 155 313 394 8.71e-12 62.0
MsG0280011351.01.T01 MTR_7g056277 56.863 51 22 0 15 65 258 308 1.03e-12 65.1
MsG0280011351.01.T01 MTR_7g056277 45.455 77 39 1 82 155 551 627 8.72e-12 62.4
MsG0280011351.01.T01 MTR_7g056287 56.863 51 22 0 15 65 2 52 1.16e-12 64.7
MsG0280011351.01.T01 MTR_3g107120 39.189 74 39 1 76 149 314 381 1.48e-12 64.3
MsG0280011351.01.T01 MTR_3g107120 58.491 53 22 0 16 68 9 61 3.42e-12 63.2
MsG0280011351.01.T01 MTR_7g022060 39.024 82 48 1 77 156 248 329 1.52e-12 64.3
MsG0280011351.01.T01 MTR_6g044572 48.333 60 31 0 16 75 2 61 1.52e-12 64.3
MsG0280011351.01.T01 MTR_7g034090 54.412 68 27 2 14 78 2 68 1.81e-12 64.3
MsG0280011351.01.T01 MTR_0571s0010 44.048 84 44 2 11 94 27 107 1.82e-12 60.8
MsG0280011351.01.T01 MTR_6g044560 48.333 60 31 0 16 75 178 237 1.84e-12 64.3
MsG0280011351.01.T01 MTR_2g007450 41.176 85 41 3 76 156 342 421 1.89e-12 63.9
MsG0280011351.01.T01 MTR_7g075820 54.386 57 26 0 13 69 3 59 2.88e-12 63.5
MsG0280011351.01.T01 MTR_7g060470 60.784 51 20 0 15 65 2 52 3.32e-12 63.5
MsG0280011351.01.T01 MTR_2g099980 49.123 57 29 0 9 65 31 87 3.56e-12 63.2
MsG0280011351.01.T01 MTR_7g007080 58.621 58 21 2 15 70 3 59 5.52e-12 62.8
MsG0280011351.01.T01 MTR_5g021550 52.542 59 26 1 15 71 18 76 7.99e-12 60.1
MsG0280011351.01.T01 MTR_2g082860 54.902 51 23 0 11 61 22 72 1.07e-11 58.9
MsG0280011351.01.T01 MTR_5g073340 30.380 158 93 2 16 156 8 165 1.20e-11 61.6
MsG0280011351.01.T01 MTR_3g107160 61.702 47 18 0 16 62 10 56 1.33e-11 61.6
MsG0280011351.01.T01 MTR_3g071850 36.986 73 46 0 77 149 327 399 1.35e-11 62.0
MsG0280011351.01.T01 MTR_5g083890 60.417 48 19 0 13 60 3 50 1.46e-11 61.6
MsG0280011351.01.T01 MTR_1g492880 50.000 64 29 1 15 75 5 68 1.54e-11 58.2
MsG0280011351.01.T01 MTR_1g492880 50.000 64 29 1 15 75 5 68 1.57e-11 57.8
MsG0280011351.01.T01 MTR_6g040270 56.863 51 22 0 18 68 10 60 1.65e-11 61.2
MsG0280011351.01.T01 MTR_1g107385 62.000 50 19 0 11 60 27 76 1.70e-11 61.2
MsG0280011351.01.T01 MTR_8g014160 58.824 51 18 1 15 62 40 90 1.82e-11 61.2
MsG0280011351.01.T01 MTR_8g014290 49.091 55 28 0 15 69 9 63 1.89e-11 59.3
MsG0280011351.01.T01 MTR_2g082800 54.717 53 24 0 9 61 20 72 2.00e-11 61.2
MsG0280011351.01.T01 MTR_2g007500 55.172 58 26 0 10 67 8 65 2.01e-11 60.8
MsG0280011351.01.T01 MTR_3g099830 50.847 59 29 0 11 69 7 65 2.39e-11 60.8
MsG0280011351.01.T01 MTR_2g007100 52.459 61 25 1 16 76 2 58 2.44e-11 57.0
MsG0280011351.01.T01 MTR_1g053025 32.867 143 71 6 21 154 261 387 2.63e-11 60.8
MsG0280011351.01.T01 MTR_4g032845 54.902 51 23 0 15 65 2 52 2.68e-11 60.8
MsG0280011351.01.T01 MTR_8g077460 40.476 84 42 3 78 156 295 375 2.99e-11 60.5
MsG0280011351.01.T01 MTR_7g021930 37.805 82 49 1 77 156 248 329 3.62e-11 60.1
MsG0280011351.01.T01 MTR_7g021970 37.805 82 49 1 77 156 248 329 3.62e-11 60.1
MsG0280011351.01.T01 MTR_7g083740 35.484 93 51 3 66 155 280 366 3.71e-11 60.5
MsG0280011351.01.T01 MTR_1g085120 50.909 55 27 0 15 69 178 232 3.71e-11 60.5
MsG0280011351.01.T01 MTR_3g026920 49.020 51 26 0 11 61 14 64 3.76e-11 60.5
MsG0280011351.01.T01 MTR_1g085120 37.736 106 54 4 15 119 166 260 3.99e-11 60.5
MsG0280011351.01.T01 MTR_1g085120 37.736 106 54 4 15 119 91 185 4.09e-11 60.5
MsG0280011351.01.T01 MTR_1g066830 36.364 88 52 2 72 155 299 386 4.41e-11 60.1
MsG0280011351.01.T01 MTR_4g081030 50.000 50 25 0 15 64 16 65 4.55e-11 60.1
MsG0280011351.01.T01 MTR_8g017280 44.444 63 33 1 5 65 23 85 5.41e-11 59.7
MsG0280011351.01.T01 MTR_2g007530 49.020 51 26 0 11 61 14 64 6.81e-11 59.3
MsG0280011351.01.T01 MTR_8g017280 44.444 63 33 1 5 65 23 85 7.27e-11 59.7
MsG0280011351.01.T01 MTR_5g058100 49.153 59 30 0 11 69 4 62 7.72e-11 59.3
MsG0280011351.01.T01 MTR_6g013160 62.500 40 15 0 16 55 9 48 8.60e-11 59.3
MsG0280011351.01.T01 MTR_8g469020 51.786 56 26 1 13 67 4 59 9.08e-11 59.3
MsG0280011351.01.T03 MTR_3g115430 68.539 89 28 0 21 109 37 125 2.02e-39 128
MsG0280011351.01.T03 MTR_1g043170 66.667 84 28 0 26 109 5 88 3.97e-36 118
MsG0280011351.01.T03 MTR_2g020180 67.470 83 27 0 27 109 133 215 4.61e-36 122
MsG0280011351.01.T03 MTR_7g081290 65.556 90 28 2 21 109 169 256 1.22e-33 117
MsG0280011351.01.T03 MTR_3g082890 61.702 94 33 1 19 109 348 441 1.54e-31 115
MsG0280011351.01.T03 MTR_3g082890 59.783 92 34 1 21 109 393 484 3.81e-29 109
MsG0280011351.01.T03 MTR_7g056433 53.763 93 39 2 21 109 297 389 1.37e-26 101
MsG0280011351.01.T03 MTR_7g033915 58.621 87 32 2 25 108 279 364 4.58e-26 99.8
MsG0280011351.01.T03 MTR_7g033990 59.494 79 31 1 25 103 297 374 4.89e-25 97.4
MsG0280011351.01.T03 MTR_1g041245 56.180 89 35 2 24 109 299 386 7.88e-25 96.7
MsG0280011351.01.T03 MTR_7g032380 49.438 89 41 2 24 109 269 356 2.41e-23 92.4
MsG0280011351.01.T03 MTR_7g034115 51.190 84 40 1 24 107 296 378 2.46e-22 89.7
MsG0280011351.01.T03 MTR_7g098510 51.087 92 41 2 21 109 301 391 3.27e-22 89.4
MsG0280011351.01.T03 MTR_7g115270 53.750 80 34 1 30 106 320 399 4.73e-22 89.0
MsG0280011351.01.T03 MTR_5g012840 51.807 83 37 2 29 109 237 318 9.86e-22 87.4
MsG0280011351.01.T03 MTR_7g032370 55.696 79 31 2 34 109 275 352 1.66e-20 84.3
MsG0280011351.01.T03 MTR_3g467400 53.165 79 34 1 34 109 289 367 5.84e-20 83.2
MsG0280011351.01.T03 MTR_7g034120 50.000 84 34 2 29 109 230 308 6.17e-20 82.4
MsG0280011351.01.T03 MTR_5g008950 46.809 94 42 3 19 109 277 365 6.23e-20 83.2
MsG0280011351.01.T03 MTR_5g013500 48.387 93 42 3 21 109 275 365 1.62e-19 82.0
MsG0280011351.01.T03 MTR_0543s0010 43.333 90 48 1 22 108 360 449 2.29e-19 82.0
MsG0280011351.01.T03 MTR_7g088260 42.529 87 48 1 25 109 376 462 3.38e-19 81.6
MsG0280011351.01.T03 MTR_3g087260 51.948 77 34 1 35 108 380 456 4.08e-19 81.3
MsG0280011351.01.T03 MTR_7g056420 52.778 72 34 0 32 103 285 356 4.98e-19 81.3
MsG0280011351.01.T03 MTR_7g056430 52.778 72 34 0 32 103 285 356 5.14e-19 81.3
MsG0280011351.01.T03 MTR_5g008920 47.674 86 40 2 27 109 298 381 7.10e-19 80.5
MsG0280011351.01.T03 MTR_7g098480 48.193 83 42 1 21 103 299 380 1.18e-18 80.1
MsG0280011351.01.T03 MTR_8g085430 50.000 76 37 1 25 100 242 316 1.46e-18 79.0
MsG0280011351.01.T03 MTR_5g008910 46.067 89 40 3 25 109 218 302 2.31e-18 78.2
MsG0280011351.01.T03 MTR_7g098570 48.193 83 42 1 21 103 303 384 2.84e-18 79.0
MsG0280011351.01.T03 MTR_3g109982 48.000 75 38 1 29 102 392 466 1.40e-17 77.0
MsG0280011351.01.T03 MTR_3g036250 51.220 82 33 2 28 106 286 363 6.93e-17 74.7
MsG0280011351.01.T03 MTR_3g113770 69.388 49 13 1 23 69 286 334 1.98e-16 73.2
MsG0280011351.01.T03 MTR_3g108140 40.741 81 45 1 31 108 67 147 4.04e-16 70.1
MsG0280011351.01.T03 MTR_4g080610 45.055 91 46 3 22 108 266 356 4.33e-16 72.4
MsG0280011351.01.T03 MTR_3g108560 44.444 90 47 1 22 108 299 388 8.08e-16 71.6
MsG0280011351.01.T03 MTR_0492s0020 43.421 76 43 0 22 97 360 435 1.37e-15 71.2
MsG0280011351.01.T03 MTR_3g108150 41.667 84 46 1 28 108 303 386 3.04e-15 70.1
MsG0280011351.01.T03 MTR_4g096730 45.122 82 37 2 32 109 12 89 8.79e-15 64.7
MsG0280011351.01.T03 MTR_3g113785 57.895 57 16 1 21 69 36 92 1.39e-14 64.3
MsG0280011351.01.T03 MTR_7g022060 34.513 113 70 2 1 109 217 329 2.13e-14 67.4
MsG0280011351.01.T03 MTR_3g105060 48.148 81 35 2 32 109 297 373 2.90e-14 67.4
MsG0280011351.01.T03 MTR_7g056020 37.374 99 56 3 12 109 278 371 1.15e-13 65.9
MsG0280011351.01.T03 MTR_3g107940 42.683 82 38 1 22 103 132 204 4.19e-13 63.9
MsG0280011351.01.T03 MTR_7g114710 47.436 78 35 2 35 109 290 364 4.39e-13 63.9
MsG0280011351.01.T03 MTR_7g021930 33.628 113 71 2 1 109 217 329 4.45e-13 63.9
MsG0280011351.01.T03 MTR_7g021970 33.628 113 71 2 1 109 217 329 4.45e-13 63.9
MsG0280011351.01.T03 MTR_2g007450 41.176 85 41 3 29 109 342 421 5.73e-13 63.9
MsG0280011351.01.T03 MTR_3g071850 36.986 73 46 0 30 102 327 399 5.98e-13 63.9
MsG0280011351.01.T03 MTR_3g107120 39.189 74 39 1 29 102 314 381 1.18e-12 62.8
MsG0280011351.01.T03 MTR_7g056277 45.455 77 39 1 35 108 551 627 2.21e-12 62.0
MsG0280011351.01.T03 MTR_7g026500 35.714 84 49 2 28 108 313 394 2.50e-12 62.0
MsG0280011351.01.T03 MTR_8g077460 40.964 83 41 3 32 109 296 375 2.74e-12 61.6
MsG0280011351.01.T03 MTR_2g102690 89.655 29 3 0 44 72 104 132 9.35e-12 57.8
MsG0280011351.01.T03 MTR_3g023630 39.535 86 46 3 18 103 286 365 1.04e-11 60.1
MsG0280011351.01.T03 MTR_1g066830 36.364 88 52 2 25 108 299 386 1.09e-11 60.1
MsG0280011351.01.T03 MTR_7g056307 44.776 67 37 0 35 101 15 81 1.68e-11 57.4
MsG0280011351.01.T03 MTR_7g083740 36.047 86 49 2 26 108 284 366 2.19e-11 59.3
MsG0280011351.01.T03 MTR_8g014210 39.506 81 45 2 32 109 152 231 6.69e-11 57.4
MsG0280011351.01.T02 MTR_4g134150 72.414 116 28 1 4 119 2 113 2.88e-52 166
MsG0280011351.01.T02 MTR_7g115270 60.177 113 43 1 9 119 5 117 1.92e-42 145
MsG0280011351.01.T02 MTR_7g033945 53.600 125 55 2 9 130 4 128 6.88e-40 133
MsG0280011351.01.T02 MTR_7g033915 53.600 125 55 2 9 130 4 128 2.05e-38 134
MsG0280011351.01.T02 MTR_7g033990 57.658 111 45 1 10 118 5 115 4.18e-38 134
MsG0280011351.01.T02 MTR_1g041245 58.036 112 45 1 10 119 5 116 4.49e-37 131
MsG0280011351.01.T02 MTR_7g032380 58.824 119 43 3 4 119 2 117 2.51e-36 128
MsG0280011351.01.T02 MTR_7g056447 54.464 112 49 1 10 119 3 114 1.97e-34 122
MsG0280011351.01.T02 MTR_7g034110 53.097 113 48 2 9 119 4 113 2.33e-34 123
MsG0280011351.01.T02 MTR_7g033940 53.448 116 51 2 18 130 96 211 3.57e-34 119
MsG0280011351.01.T02 MTR_7g056420 54.386 114 46 2 10 119 3 114 1.18e-31 119
MsG0280011351.01.T02 MTR_8g085430 52.941 119 43 3 4 112 2 117 1.22e-31 115
MsG0280011351.01.T02 MTR_7g056430 54.386 114 46 2 10 119 3 114 1.53e-31 119
MsG0280011351.01.T02 MTR_3g108150 54.128 109 48 1 11 119 8 114 3.72e-30 112
MsG0280011351.01.T02 MTR_3g082890 58.772 114 39 5 4 112 82 192 5.58e-30 113
MsG0280011351.01.T02 MTR_3g082890 58.772 114 39 5 4 112 2 112 6.39e-30 113
MsG0280011351.01.T02 MTR_3g114200 55.172 116 46 3 3 112 2 117 7.81e-30 106
MsG0280011351.01.T02 MTR_7g081290 44.785 163 70 5 1 158 1 148 4.13e-29 107
MsG0280011351.01.T02 MTR_2g020170 61.386 101 35 3 16 112 22 122 4.20e-29 104
MsG0280011351.01.T02 MTR_7g056433 56.075 107 42 2 10 111 3 109 2.57e-28 108
MsG0280011351.01.T02 MTR_0492s0020 49.123 114 58 0 6 119 76 189 9.37e-27 104
MsG0280011351.01.T02 MTR_0492s0020 64.151 53 18 1 11 63 8 59 6.72e-15 71.2
MsG0280011351.01.T02 MTR_0543s0010 49.123 114 58 0 6 119 76 189 9.97e-27 104
MsG0280011351.01.T02 MTR_0543s0010 64.151 53 18 1 11 63 8 59 6.50e-15 71.2
MsG0280011351.01.T02 MTR_3g036250 53.684 95 42 1 16 108 5 99 1.07e-26 103
MsG0280011351.01.T02 MTR_7g098510 45.038 131 69 1 3 130 2 132 2.66e-26 102
MsG0280011351.01.T02 MTR_7g088260 49.524 105 53 0 15 119 90 194 3.00e-26 103
MsG0280011351.01.T02 MTR_3g109982 50.943 106 51 1 15 119 12 117 3.54e-26 103
MsG0280011351.01.T02 MTR_3g110010 50.943 106 51 1 15 119 12 117 3.71e-26 103
MsG0280011351.01.T02 MTR_7g034115 51.695 118 52 2 4 119 2 116 1.07e-25 100
MsG0280011351.01.T02 MTR_7g098590 53.684 95 41 1 3 94 2 96 1.83e-25 94.7
MsG0280011351.01.T02 MTR_3g040700 47.273 110 56 1 11 118 38 147 2.29e-25 100
MsG0280011351.01.T02 MTR_7g032370 54.255 94 41 1 28 119 2 95 2.45e-25 99.4
MsG0280011351.01.T02 MTR_3g108560 48.182 110 54 2 11 119 14 121 4.08e-25 98.2
MsG0280011351.01.T02 MTR_3g108560 48.182 110 54 2 11 119 14 121 8.26e-25 98.6
MsG0280011351.01.T02 MTR_7g098480 51.818 110 48 3 3 108 2 110 4.48e-24 97.4
MsG0280011351.01.T02 MTR_1g095750 54.255 94 39 2 4 94 34 126 7.34e-24 90.9
MsG0280011351.01.T02 MTR_3g105060 46.903 113 57 2 10 119 8 120 1.30e-23 95.1
MsG0280011351.01.T02 MTR_3g023630 45.536 112 57 2 12 119 4 115 1.70e-22 92.0
MsG0280011351.01.T02 MTR_7g098570 46.825 126 56 4 1 119 2 123 5.08e-22 91.7
MsG0280011351.01.T02 MTR_7g114710 53.409 88 40 1 10 96 7 94 5.62e-22 90.5
MsG0280011351.01.T02 MTR_3g467400 43.137 102 53 2 16 112 3 104 1.73e-20 86.7
MsG0280011351.01.T02 MTR_3g113782 70.000 60 16 1 3 60 2 61 2.70e-20 80.1
MsG0280011351.01.T02 MTR_1g492880 50.588 85 34 2 15 94 5 86 6.24e-19 77.0
MsG0280011351.01.T02 MTR_7g034090 52.273 88 34 2 15 94 3 90 6.84e-19 82.4
MsG0280011351.01.T02 MTR_1g492880 50.588 85 34 2 15 94 5 86 8.10e-19 77.0
MsG0280011351.01.T02 MTR_3g087260 54.286 70 32 0 10 79 6 75 9.21e-19 82.4
MsG0280011351.01.T02 MTR_3g107100 47.917 96 42 4 15 107 10 100 3.50e-18 80.5
MsG0280011351.01.T02 MTR_7g056287 47.059 85 40 2 15 94 2 86 3.79e-17 77.4
MsG0280011351.01.T02 MTR_7g056277 47.059 85 40 2 15 94 258 342 4.78e-17 77.4
MsG0280011351.01.T02 MTR_5g012840 46.914 81 39 1 39 119 12 88 1.51e-16 75.1
MsG0280011351.01.T02 MTR_5g008920 46.835 79 41 1 18 96 14 91 1.96e-16 75.5
MsG0280011351.01.T02 MTR_7g026500 36.806 144 82 5 13 150 11 151 2.29e-16 75.5
MsG0280011351.01.T02 MTR_8g017280 35.246 122 69 4 5 119 23 141 1.14e-15 72.8
MsG0280011351.01.T02 MTR_3g107160 52.857 70 31 1 16 83 10 79 1.28e-15 73.2
MsG0280011351.01.T02 MTR_8g017280 35.246 122 69 4 5 119 23 141 2.43e-15 72.4
MsG0280011351.01.T02 MTR_2g082800 41.667 108 59 1 9 112 20 127 2.66e-15 72.4
MsG0280011351.01.T02 MTR_2g099980 38.095 105 63 1 9 111 31 135 3.10e-15 72.0
MsG0280011351.01.T02 MTR_7g007080 44.792 96 47 4 15 106 3 96 3.38e-15 72.0
MsG0280011351.01.T02 MTR_3g026920 34.400 125 79 1 11 132 14 138 3.64e-15 72.0
MsG0280011351.01.T02 MTR_5g008950 46.835 79 36 1 18 96 1 73 6.04e-15 71.2
MsG0280011351.01.T02 MTR_1g107385 51.064 94 39 4 11 99 27 118 2.51e-14 69.7
MsG0280011351.01.T02 MTR_6g044572 36.842 114 54 3 16 112 2 114 2.93e-14 69.3
MsG0280011351.01.T02 MTR_6g044560 36.842 114 54 3 16 112 178 290 3.20e-14 69.3
MsG0280011351.01.T02 MTR_3g107120 42.708 96 37 2 16 96 9 101 4.86e-14 68.6
MsG0280011351.01.T02 MTR_8g468810 43.011 93 38 3 15 96 24 112 1.32e-13 67.0
MsG0280011351.01.T02 MTR_8g468810 43.011 93 38 3 15 96 24 112 1.38e-13 67.0
MsG0280011351.01.T02 MTR_2g007400 38.462 117 57 4 16 119 12 126 1.47e-13 67.4
MsG0280011351.01.T02 MTR_6g011460 43.373 83 43 2 16 94 46 128 1.51e-13 67.4
MsG0280011351.01.T02 MTR_8g468810 43.011 93 38 3 15 96 24 112 1.54e-13 67.0
MsG0280011351.01.T02 MTR_8g469020 42.857 98 42 3 13 100 4 97 1.76e-13 67.0
MsG0280011351.01.T02 MTR_8g468810 43.011 93 38 3 15 96 24 112 1.91e-13 67.0
MsG0280011351.01.T02 MTR_8g468810 43.011 93 38 3 15 96 24 112 1.97e-13 67.0
MsG0280011351.01.T02 MTR_5g082930 46.377 69 34 1 18 83 17 85 1.99e-13 65.5
MsG0280011351.01.T02 MTR_1089s0010 53.571 56 26 0 16 71 8 63 2.06e-13 67.0
MsG0280011351.01.T02 MTR_2g007530 32.836 134 78 2 11 132 14 147 2.92e-13 66.2
MsG0280011351.01.T02 MTR_5g087940 29.448 163 90 3 15 152 25 187 3.13e-13 66.2
MsG0280011351.01.T02 MTR_7g068570 33.721 86 56 1 12 96 1 86 3.19e-13 64.3
MsG0280011351.01.T02 MTR_6g040270 57.407 54 23 0 18 71 10 63 4.36e-13 65.9
MsG0280011351.01.T02 MTR_5g073420 39.326 89 49 2 16 99 11 99 4.98e-13 65.9
MsG0280011351.01.T02 MTR_8g062080 50.649 77 31 4 16 85 23 99 6.30e-13 65.5
MsG0280011351.01.T02 MTR_2g007450 49.296 71 33 1 16 83 16 86 6.91e-13 65.5
MsG0280011351.01.T02 MTR_7g060470 60.784 51 20 0 15 65 2 52 1.07e-12 64.7
MsG0280011351.01.T02 MTR_3g099830 48.000 75 36 1 11 82 7 81 1.11e-12 64.7
MsG0280011351.01.T02 MTR_7g075820 54.237 59 27 0 13 71 3 61 1.12e-12 64.7
MsG0280011351.01.T02 MTR_5g083890 60.417 48 19 0 13 60 3 50 1.38e-12 64.7
MsG0280011351.01.T02 MTR_8g014160 40.351 114 51 5 15 112 40 152 1.43e-12 64.7
MsG0280011351.01.T02 MTR_7g034065 58.462 65 23 1 9 73 4 64 2.12e-12 59.3
MsG0280011351.01.T02 MTR_0571s0010 53.704 54 25 0 11 64 27 80 2.12e-12 60.5
MsG0280011351.01.T02 MTR_1g085120 39.326 89 50 1 15 99 178 266 2.98e-12 63.5
MsG0280011351.01.T02 MTR_1g085120 39.326 89 50 1 15 99 166 254 3.18e-12 63.5
MsG0280011351.01.T02 MTR_5g021550 46.377 69 35 1 15 81 18 86 3.68e-12 61.2
MsG0280011351.01.T02 MTR_1g085120 39.326 89 50 1 15 99 91 179 4.06e-12 63.2
MsG0280011351.01.T02 MTR_2g007550 39.604 101 51 4 10 102 8 106 4.62e-12 62.8
MsG0280011351.01.T02 MTR_5g058100 37.500 96 56 1 11 102 4 99 4.68e-12 63.2
MsG0280011351.01.T02 MTR_6g022390 38.182 110 54 4 16 111 5 114 5.62e-12 60.5
MsG0280011351.01.T02 MTR_3g095600 42.222 90 46 3 16 99 4 93 5.63e-12 62.4
MsG0280011351.01.T02 MTR_5g063450 39.362 94 47 2 15 108 26 109 6.41e-12 62.4
MsG0280011351.01.T02 MTR_3g095640 48.333 60 29 1 16 73 18 77 7.00e-12 60.5
MsG0280011351.01.T02 MTR_6g025160 38.636 88 52 1 15 100 100 187 7.00e-12 62.4
MsG0280011351.01.T02 MTR_8g062310 41.176 102 51 4 16 112 25 122 1.06e-11 62.0
MsG0280011351.01.T02 MTR_2g007360 36.029 136 75 6 16 143 12 143 1.21e-11 61.6
MsG0280011351.01.T02 MTR_4g032845 54.902 51 23 0 15 65 2 52 1.43e-11 61.6
MsG0280011351.01.T02 MTR_8g070950 43.564 101 43 4 3 93 2 98 1.50e-11 61.6
MsG0280011351.01.T02 MTR_5g058000 35.294 102 60 2 16 111 8 109 1.53e-11 61.6
MsG0280011351.01.T02 MTR_8g062010 34.513 113 63 2 10 111 3 115 1.63e-11 61.6
MsG0280011351.01.T02 MTR_2g007500 50.000 72 33 1 10 78 8 79 1.80e-11 61.2
MsG0280011351.01.T02 MTR_1g108820 40.230 87 46 2 13 96 5 88 1.88e-11 61.2
MsG0280011351.01.T02 MTR_4g014260 28.889 135 81 1 15 134 25 159 2.13e-11 61.2
MsG0280011351.01.T02 MTR_5g013500 37.500 104 49 3 10 111 3 92 2.36e-11 60.8
MsG0280011351.01.T02 MTR_1g108820 40.230 87 46 2 13 96 5 88 2.37e-11 60.8
MsG0280011351.01.T02 MTR_4g045680 39.326 89 48 1 15 97 15 103 2.39e-11 60.8
MsG0280011351.01.T02 MTR_5g080710 40.196 102 49 3 2 97 18 113 2.50e-11 60.8
MsG0280011351.01.T02 MTR_4g050250 34.906 106 47 3 16 107 21 118 2.67e-11 60.8
MsG0280011351.01.T02 MTR_2g082860 52.830 53 25 0 9 61 20 72 2.80e-11 57.8
MsG0280011351.01.T02 MTR_2g007100 61.364 44 17 0 16 59 2 45 3.19e-11 56.6
MsG0280011351.01.T02 MTR_4g014260 28.889 135 81 1 15 134 25 159 3.50e-11 60.5
MsG0280011351.01.T02 MTR_5g039490 39.773 88 46 2 1 81 1 88 4.18e-11 60.1
MsG0280011351.01.T02 MTR_8g445780 38.028 71 44 0 10 80 7 77 4.26e-11 60.1
MsG0280011351.01.T02 MTR_5g073340 50.000 56 28 0 16 71 8 63 5.30e-11 59.7
MsG0280011351.01.T02 MTR_4g093690 37.975 79 47 1 16 94 18 94 6.38e-11 59.3
MsG0280011351.01.T02 MTR_4g092430 42.500 80 46 0 14 93 41 120 6.45e-11 59.7
MsG0280011351.01.T02 MTR_2g005990 44.444 72 37 1 16 84 6 77 6.65e-11 59.7
MsG0280011351.01.T02 MTR_3g023270 43.478 69 39 0 15 83 11 79 7.03e-11 59.7
MsG0280011351.01.T02 MTR_4g092430 42.500 80 46 0 14 93 41 120 7.04e-11 59.7
MsG0280011351.01.T02 MTR_6g018600 38.667 75 46 0 15 89 51 125 7.14e-11 59.7
MsG0280011351.01.T02 MTR_4g081030 34.259 108 62 4 15 119 16 117 7.26e-11 59.7
MsG0280011351.01.T02 MTR_7g033470 42.105 76 38 2 16 86 14 88 7.41e-11 57.4
MsG0280011351.01.T02 MTR_3g052990 32.192 146 78 5 15 142 27 169 7.57e-11 59.7
MsG0280011351.01.T02 MTR_6g013160 62.500 40 15 0 16 55 9 48 7.85e-11 59.3
MsG0280011351.01.T02 MTR_8g014290 50.000 54 27 0 15 68 9 62 7.85e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011351.01.T01 AT3G12840 27.778 144 79 2 17 135 16 159 2.49e-14 67.0
MsG0280011351.01.T01 AT4G00160 47.761 67 35 0 1 67 1 67 5.47e-13 65.9
MsG0280011351.01.T01 AT5G41840 56.000 50 22 0 16 65 14 63 1.00e-12 65.1
MsG0280011351.01.T01 AT3G59200 51.852 54 26 0 14 67 5 58 2.06e-12 63.9
MsG0280011351.01.T01 AT5G53640 52.727 55 26 0 15 69 21 75 2.51e-12 62.8
MsG0280011351.01.T01 AT3G59200 51.852 54 26 0 14 67 5 58 2.52e-12 63.9
MsG0280011351.01.T01 AT5G22610 50.000 58 29 0 12 69 14 71 3.26e-12 63.5
MsG0280011351.01.T01 AT5G22610 50.000 58 29 0 12 69 14 71 3.34e-12 63.5
MsG0280011351.01.T01 AT5G22730 43.662 71 37 1 3 73 18 85 1.25e-11 62.0
MsG0280011351.01.T01 AT5G22730 43.662 71 37 1 3 73 18 85 1.25e-11 62.0
MsG0280011351.01.T01 AT5G22730 43.662 71 37 1 3 73 18 85 1.28e-11 61.6
MsG0280011351.01.T01 AT2G04230 44.776 67 34 1 15 78 12 78 1.37e-11 61.6
MsG0280011351.01.T01 AT5G18780 58.491 53 22 0 15 67 10 62 1.64e-11 61.6
MsG0280011351.01.T01 AT5G18780 58.491 53 22 0 15 67 10 62 1.64e-11 61.6
MsG0280011351.01.T01 AT5G18780 58.491 53 22 0 15 67 10 62 1.78e-11 61.2
MsG0280011351.01.T01 AT5G18780 58.491 53 22 0 15 67 10 62 1.78e-11 61.2
MsG0280011351.01.T01 AT1G16930 56.364 55 24 0 16 70 15 69 2.06e-11 61.2
MsG0280011351.01.T01 AT1G16930 56.364 55 24 0 16 70 15 69 2.06e-11 61.2
MsG0280011351.01.T01 AT1G16930 56.364 55 24 0 16 70 15 69 2.06e-11 61.2
MsG0280011351.01.T01 AT5G27750 53.968 63 27 1 12 72 1 63 4.38e-11 60.1
MsG0280011351.01.T01 AT5G27750 53.968 63 27 1 12 72 1 63 5.35e-11 60.1
MsG0280011351.01.T01 AT1G78760 52.727 55 26 0 15 69 15 69 8.14e-11 59.3
MsG0280011351.01.T03 AT5G56440 39.474 76 46 0 29 104 347 422 1.97e-11 59.3
MsG0280011351.01.T02 AT4G00160 40.517 116 61 4 1 111 1 113 6.57e-15 71.2
MsG0280011351.01.T02 AT5G41840 36.559 93 43 2 16 94 14 104 5.84e-14 68.6
MsG0280011351.01.T02 AT5G53640 54.386 57 26 0 15 71 21 77 1.59e-13 65.9
MsG0280011351.01.T02 AT3G52680 39.130 115 61 4 1 111 6 115 5.03e-13 65.9
MsG0280011351.01.T02 AT3G52680 39.130 115 61 4 1 111 6 115 6.02e-13 65.9
MsG0280011351.01.T02 AT1G78760 38.614 101 58 2 15 112 15 114 2.33e-12 63.9
MsG0280011351.01.T02 AT5G22610 50.000 60 30 0 12 71 14 73 2.48e-12 63.9
MsG0280011351.01.T02 AT5G22610 50.000 60 30 0 12 71 14 73 2.59e-12 63.9
MsG0280011351.01.T02 AT3G12840 39.744 78 45 1 17 94 16 91 3.17e-12 61.6
MsG0280011351.01.T02 AT3G59200 51.852 54 26 0 14 67 5 58 3.49e-12 63.5
MsG0280011351.01.T02 AT4G26340 37.755 98 59 2 16 112 2 98 4.54e-12 63.2
MsG0280011351.01.T02 AT3G59200 51.852 54 26 0 14 67 5 58 5.18e-12 63.2
MsG0280011351.01.T02 AT5G22730 50.877 57 28 0 15 71 27 83 7.19e-12 62.8
MsG0280011351.01.T02 AT5G22730 50.877 57 28 0 15 71 27 83 7.19e-12 62.8
MsG0280011351.01.T02 AT1G16930 33.582 134 80 3 16 148 15 140 7.25e-12 62.4
MsG0280011351.01.T02 AT1G16930 33.582 134 80 3 16 148 15 140 7.25e-12 62.4
MsG0280011351.01.T02 AT1G16930 33.582 134 80 3 16 148 15 140 7.25e-12 62.4
MsG0280011351.01.T02 AT5G22730 44.928 69 35 1 3 71 18 83 7.26e-12 62.4
MsG0280011351.01.T02 AT5G18780 39.604 101 38 3 15 105 10 97 8.82e-12 62.4
MsG0280011351.01.T02 AT5G18780 39.604 101 38 3 15 105 10 97 8.82e-12 62.4
MsG0280011351.01.T02 AT5G18780 58.491 53 22 0 15 67 10 62 8.90e-12 62.4
MsG0280011351.01.T02 AT5G18780 58.491 53 22 0 15 67 10 62 8.90e-12 62.4
MsG0280011351.01.T02 AT1G19070 43.182 88 34 3 16 94 2 82 1.01e-11 58.2
MsG0280011351.01.T02 AT2G26030 42.222 90 45 3 16 103 4 88 1.55e-11 61.6
MsG0280011351.01.T02 AT2G26030 42.222 90 45 3 16 103 4 88 1.59e-11 61.6
MsG0280011351.01.T02 AT2G26030 42.222 90 45 3 16 103 4 88 1.59e-11 61.6
MsG0280011351.01.T02 AT5G27750 56.897 58 23 1 12 67 1 58 1.70e-11 61.6
MsG0280011351.01.T02 AT1G60400 44.828 87 43 2 16 102 14 95 1.82e-11 61.2
MsG0280011351.01.T02 AT5G27750 56.897 58 23 1 12 67 1 58 2.08e-11 61.2
MsG0280011351.01.T02 AT5G22720 43.333 90 48 2 15 103 22 109 2.82e-11 60.8
MsG0280011351.01.T02 AT3G49040 34.821 112 67 3 10 120 11 117 2.97e-11 60.5
MsG0280011351.01.T02 AT3G49030 35.652 115 70 3 10 122 15 127 4.89e-11 60.1
MsG0280011351.01.T02 AT3G49030 35.652 115 70 3 10 122 15 127 4.89e-11 60.1
MsG0280011351.01.T02 AT5G41830 50.000 52 26 0 16 67 13 64 5.64e-11 60.1
MsG0280011351.01.T02 AT1G13780 53.704 54 25 0 12 65 6 59 8.55e-11 59.3
MsG0280011351.01.T02 AT1G13780 53.704 54 25 0 12 65 6 59 9.56e-11 59.3

Find 53 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCATTCCGGAACAATTTC+TGG 0.142190 2:-82861519 None:intergenic
CGATCATTTCGCCTCAAATT+TGG 0.183656 2:+82861129 MsG0280011351.01.T01:intron
CTAATAACTTGCTTGTTTAC+AGG 0.210792 2:+82861552 MsG0280011351.01.T01:CDS
CTATTCTTCTTTAATTCTAA+TGG 0.231959 2:+82861291 MsG0280011351.01.T01:intron
TTGGATCAGACTGTCATAAT+TGG 0.254926 2:-82861262 None:intergenic
TAATTCTCTTGATTGTTTAC+AGG 0.257600 2:+82861458 MsG0280011351.01.T01:intron
TGTTTACAGGACATCGAAAA+TGG 0.276176 2:+82861471 MsG0280011351.01.T01:intron
CGACATCAACAGATTTATTA+AGG 0.285736 2:+82861170 MsG0280011351.01.T01:intron
ACTTGTGGCAACAGAATCTT+TGG 0.311303 2:-82860968 None:intergenic
CTTCTGTTGGAATGGATCTA+TGG 0.325934 2:-82860888 None:intergenic
CAAAGCGGTGGAATCCATTA+TGG 0.336794 2:+82860998 MsG0280011351.01.T01:CDS
TAAGGCAGCGATACTAAGTA+TGG 0.343463 2:+82861188 MsG0280011351.01.T01:intron
TGATACAATGACTGAGTATA+TGG 0.358016 2:-82861085 None:intergenic
ATGGAATTTATGAGGACAAT+TGG 0.372209 2:+82861490 MsG0280011351.01.T01:CDS
TGACGTAGTCTTCGAAGGTT+TGG 0.379781 2:-82861050 None:intergenic
TAAAGAAGAATAGCTCCATT+TGG 0.390714 2:-82861281 None:intergenic
GACGTAGTCTTCGAAGGTTT+GGG 0.395022 2:-82861049 None:intergenic
ATGTGAGATATAATTGAATC+TGG 0.395943 2:-82860928 None:intergenic
AGCTGAGATGAAAGGCATTC+CGG 0.396140 2:-82861531 None:intergenic
TCAAGAACCGAGAGCCATAA+TGG 0.442356 2:-82861012 None:intergenic
GATCCATTCCAACAGAAGAT+AGG 0.452773 2:+82860893 MsG0280011351.01.T01:CDS
TGTCATAATTGGCGACTTTG+AGG 0.456875 2:-82861251 None:intergenic
GCAGGATCCAGAAATTGTTC+CGG 0.459638 2:+82861512 MsG0280011351.01.T01:CDS
TTCATTTAAAGTTATGGAAG+AGG 0.477775 2:-82861661 None:intergenic
ATGAAAAGCATGAAATGTTA+CGG 0.477875 2:+82861679 MsG0280011351.01.T01:CDS
CATATTCTATGCCAAATTTG+AGG 0.478293 2:-82861140 None:intergenic
TTGAGGCGAAATGATCGTAT+TGG 0.479233 2:-82861123 None:intergenic
GAGCTAAGCCTATCTTCTGT+TGG 0.479690 2:-82860901 None:intergenic
AATATAAGTTTACATCCCCT+TGG 0.482114 2:-82861717 None:intergenic
CATCGAAAATGGAATTTATG+AGG 0.500230 2:+82861482 MsG0280011351.01.T01:CDS
TCTATGGAAATGAGAGGAGG+AGG 0.503530 2:-82860872 None:intergenic
GGAAATTATCTGTGTGCCCA+AGG 0.506976 2:+82861700 MsG0280011351.01.T01:CDS
AATTTATGAGGACAATTGGC+AGG 0.510607 2:+82861494 MsG0280011351.01.T01:CDS
TTATGACAGTCTGATCCAAA+TGG 0.514463 2:+82861266 MsG0280011351.01.T01:intron
AAGCCTATCTTCTGTTGGAA+TGG 0.515215 2:-82860896 None:intergenic
ATATAAGTTTACATCCCCTT+GGG 0.521322 2:-82861716 None:intergenic
GAAATTATCTGTGTGCCCAA+GGG 0.554798 2:+82861701 MsG0280011351.01.T01:CDS
GTGGAATCCATTATGGCTCT+CGG 0.561722 2:+82861005 MsG0280011351.01.T01:CDS
GTGGCAACAGAATCTTTGGT+TGG 0.584553 2:-82860964 None:intergenic
ATGGATTCCACCGCTTTGAG+AGG 0.590607 2:-82860993 None:intergenic
AAAGGTGACGTAGTCTTCGA+AGG 0.593356 2:-82861055 None:intergenic
TGCTTGTTTACAGGTTGCAG+AGG 0.594080 2:+82861561 MsG0280011351.01.T01:CDS
ATTAAAACAAAGATATGTAG+AGG 0.597706 2:-82861439 None:intergenic
AGATATAATTGAATCTGGAA+AGG 0.602688 2:-82860923 None:intergenic
AATGGATCTATGGAAATGAG+AGG 0.613076 2:-82860878 None:intergenic
GGATCTATGGAAATGAGAGG+AGG 0.618863 2:-82860875 None:intergenic
AAATTATCTGTGTGCCCAAG+GGG 0.623959 2:+82861702 MsG0280011351.01.T01:CDS
CCGCTTTGAGAGGACACTTG+TGG 0.624337 2:-82860983 None:intergenic
TGAGTATATGGCATGGCGAA+AGG 0.631042 2:-82861073 None:intergenic
AAGTTATTAGCTGAGATGAA+AGG 0.632226 2:-82861539 None:intergenic
CAAGTGTCCTCTCAAAGCGG+TGG 0.648388 2:+82860986 MsG0280011351.01.T01:CDS
CAATGACTGAGTATATGGCA+TGG 0.661316 2:-82861080 None:intergenic
CCACAAGTGTCCTCTCAAAG+CGG 0.713093 2:+82860983 MsG0280011351.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAACAAAGATATGTAG+AGG - Chr2:82861442-82861461 None:intergenic 20.0%
!! CTATTCTTCTTTAATTCTAA+TGG + Chr2:82861291-82861310 MsG0280011351.01.T01:intron 20.0%
!! TAATTCTAATGGAAAAAGTT+GGG + Chr2:82861302-82861321 MsG0280011351.01.T01:intron 20.0%
!! TTAATTCTAATGGAAAAAGT+TGG + Chr2:82861301-82861320 MsG0280011351.01.T01:intron 20.0%
!!! ATGCTTTTCATTTAAAGTTA+TGG - Chr2:82861670-82861689 None:intergenic 20.0%
! AATTCTAATGGAAAAAGTTG+GGG + Chr2:82861303-82861322 MsG0280011351.01.T01:intron 25.0%
! AGATATAATTGAATCTGGAA+AGG - Chr2:82860926-82860945 None:intergenic 25.0%
! ATGTGAGATATAATTGAATC+TGG - Chr2:82860931-82860950 None:intergenic 25.0%
! TAATTCTCTTGATTGTTTAC+AGG + Chr2:82861458-82861477 MsG0280011351.01.T01:intron 25.0%
!! ATGAAAAGCATGAAATGTTA+CGG + Chr2:82861679-82861698 MsG0280011351.01.T01:CDS 25.0%
!! TTCATTTAAAGTTATGGAAG+AGG - Chr2:82861664-82861683 None:intergenic 25.0%
AAGTTATTAGCTGAGATGAA+AGG - Chr2:82861542-82861561 None:intergenic 30.0%
AATATAAGTTTACATCCCCT+TGG - Chr2:82861720-82861739 None:intergenic 30.0%
AATTGTAAAATGTTGGAGCT+TGG - Chr2:82861370-82861389 None:intergenic 30.0%
ATATAAGTTTACATCCCCTT+GGG - Chr2:82861719-82861738 None:intergenic 30.0%
ATGGAATTTATGAGGACAAT+TGG + Chr2:82861490-82861509 MsG0280011351.01.T01:CDS 30.0%
ATTGTAAAATGTTGGAGCTT+GGG - Chr2:82861369-82861388 None:intergenic 30.0%
CATATTCTATGCCAAATTTG+AGG - Chr2:82861143-82861162 None:intergenic 30.0%
CATCGAAAATGGAATTTATG+AGG + Chr2:82861482-82861501 MsG0280011351.01.T01:CDS 30.0%
CCTCATGAATTGTAAAATGT+TGG - Chr2:82861377-82861396 None:intergenic 30.0%
CGACATCAACAGATTTATTA+AGG + Chr2:82861170-82861189 MsG0280011351.01.T01:intron 30.0%
TAAAGAAGAATAGCTCCATT+TGG - Chr2:82861284-82861303 None:intergenic 30.0%
TGATACAATGACTGAGTATA+TGG - Chr2:82861088-82861107 None:intergenic 30.0%
! CCAACATTTTACAATTCATG+AGG + Chr2:82861374-82861393 MsG0280011351.01.T01:intron 30.0%
!! CTAATAACTTGCTTGTTTAC+AGG + Chr2:82861552-82861571 MsG0280011351.01.T01:CDS 30.0%
AATGGATCTATGGAAATGAG+AGG - Chr2:82860881-82860900 None:intergenic 35.0%
AATTTATGAGGACAATTGGC+AGG + Chr2:82861494-82861513 MsG0280011351.01.T01:CDS 35.0%
TGTTTACAGGACATCGAAAA+TGG + Chr2:82861471-82861490 MsG0280011351.01.T01:intron 35.0%
TTATGACAGTCTGATCCAAA+TGG + Chr2:82861266-82861285 MsG0280011351.01.T01:intron 35.0%
TTGGATCAGACTGTCATAAT+TGG - Chr2:82861265-82861284 None:intergenic 35.0%
AAATTATCTGTGTGCCCAAG+GGG + Chr2:82861702-82861721 MsG0280011351.01.T01:CDS 40.0%
AAGCCTATCTTCTGTTGGAA+TGG - Chr2:82860899-82860918 None:intergenic 40.0%
ACTTGTGGCAACAGAATCTT+TGG - Chr2:82860971-82860990 None:intergenic 40.0%
CAATGACTGAGTATATGGCA+TGG - Chr2:82861083-82861102 None:intergenic 40.0%
CGATCATTTCGCCTCAAATT+TGG + Chr2:82861129-82861148 MsG0280011351.01.T01:intron 40.0%
CTTCTGTTGGAATGGATCTA+TGG - Chr2:82860891-82860910 None:intergenic 40.0%
GAAAAAGTTGGGGTGAAAAG+TGG + Chr2:82861313-82861332 MsG0280011351.01.T01:intron 40.0%
GAAATTATCTGTGTGCCCAA+GGG + Chr2:82861701-82861720 MsG0280011351.01.T01:CDS 40.0%
GATCCATTCCAACAGAAGAT+AGG + Chr2:82860893-82860912 MsG0280011351.01.T01:CDS 40.0%
TAAGGCAGCGATACTAAGTA+TGG + Chr2:82861188-82861207 MsG0280011351.01.T01:intron 40.0%
TGTCATAATTGGCGACTTTG+AGG - Chr2:82861254-82861273 None:intergenic 40.0%
TTGAGGCGAAATGATCGTAT+TGG - Chr2:82861126-82861145 None:intergenic 40.0%
AAAGGTGACGTAGTCTTCGA+AGG - Chr2:82861058-82861077 None:intergenic 45.0%
AGGCATTCCGGAACAATTTC+TGG - Chr2:82861522-82861541 None:intergenic 45.0%
CAAAGCGGTGGAATCCATTA+TGG + Chr2:82860998-82861017 MsG0280011351.01.T01:CDS 45.0%
GACGTAGTCTTCGAAGGTTT+GGG - Chr2:82861052-82861071 None:intergenic 45.0%
GAGCTAAGCCTATCTTCTGT+TGG - Chr2:82860904-82860923 None:intergenic 45.0%
GCAGGATCCAGAAATTGTTC+CGG + Chr2:82861512-82861531 MsG0280011351.01.T01:CDS 45.0%
GGAAATTATCTGTGTGCCCA+AGG + Chr2:82861700-82861719 MsG0280011351.01.T01:CDS 45.0%
GGATCTATGGAAATGAGAGG+AGG - Chr2:82860878-82860897 None:intergenic 45.0%
GTGGAATCCATTATGGCTCT+CGG + Chr2:82861005-82861024 MsG0280011351.01.T01:CDS 45.0%
GTGGCAACAGAATCTTTGGT+TGG - Chr2:82860967-82860986 None:intergenic 45.0%
TCAAGAACCGAGAGCCATAA+TGG - Chr2:82861015-82861034 None:intergenic 45.0%
TCTATGGAAATGAGAGGAGG+AGG - Chr2:82860875-82860894 None:intergenic 45.0%
TGACGTAGTCTTCGAAGGTT+TGG - Chr2:82861053-82861072 None:intergenic 45.0%
TGAGTATATGGCATGGCGAA+AGG - Chr2:82861076-82861095 None:intergenic 45.0%
TGCTTGTTTACAGGTTGCAG+AGG + Chr2:82861561-82861580 MsG0280011351.01.T01:CDS 45.0%
!! AGCTGAGATGAAAGGCATTC+CGG - Chr2:82861534-82861553 None:intergenic 45.0%
CCACAAGTGTCCTCTCAAAG+CGG + Chr2:82860983-82861002 MsG0280011351.01.T01:CDS 50.0%
! ATGGATTCCACCGCTTTGAG+AGG - Chr2:82860996-82861015 None:intergenic 50.0%
CAAGTGTCCTCTCAAAGCGG+TGG + Chr2:82860986-82861005 MsG0280011351.01.T01:CDS 55.0%
!! CCGCTTTGAGAGGACACTTG+TGG - Chr2:82860986-82861005 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 82860865 82861746 82860865 ID=MsG0280011351.01;Name=MsG0280011351.01
Chr2 mRNA 82860865 82861746 82860865 ID=MsG0280011351.01.T01;Parent=MsG0280011351.01;Name=MsG0280011351.01.T01;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0|0|2|0|156
Chr2 exon 82860865 82861068 82860865 ID=MsG0280011351.01.T01:exon:3033;Parent=MsG0280011351.01.T01
Chr2 exon 82861480 82861746 82861480 ID=MsG0280011351.01.T01:exon:3034;Parent=MsG0280011351.01.T01
Chr2 CDS 82860865 82861068 82860865 ID=MsG0280011351.01.T01:cds;Parent=MsG0280011351.01.T01
Chr2 CDS 82861480 82861746 82861480 ID=MsG0280011351.01.T01:cds;Parent=MsG0280011351.01.T01
Chr2 mRNA 82860865 82861341 82860865 ID=MsG0280011351.01.T02;Parent=MsG0280011351.01;Name=MsG0280011351.01.T02;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|158
Chr2 exon 82860865 82861341 82860865 ID=MsG0280011351.01.T02:exon:3035;Parent=MsG0280011351.01.T02
Chr2 CDS 82860865 82861341 82860865 ID=MsG0280011351.01.T02:cds;Parent=MsG0280011351.01.T02
Chr2 mRNA 82861417 82861746 82861417 ID=MsG0280011351.01.T03;Parent=MsG0280011351.01;Name=MsG0280011351.01.T03;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|0|1|0|109
Chr2 exon 82861417 82861746 82861417 ID=MsG0280011351.01.T03:exon:3036;Parent=MsG0280011351.01.T03
Chr2 CDS 82861417 82861746 82861417 ID=MsG0280011351.01.T03:cds;Parent=MsG0280011351.01.T03
Gene Sequence

>MsG0280011351.01.T01

ATGTCTTCCTCCTCCTCTCATTTCCATAGATCCATTCCAACAGAAGATAGGCTTAGCTCCTTTCCAGATTCAATTATATCTCACATTCTCTCTTTTCTTCCAACCAAAGATTCTGTTGCCACAAGTGTCCTCTCAAAGCGGTGGAATCCATTATGGCTCTCGGTTCTTGATCTCAACTTTGACGCCCAAACCTTCGAAGACTACGACATCGAAAATGGAATTTATGAGGACAATTGGCAGGATCCAGAAATTGTTCCGGAATGCCTTTCATCTCAGCTAATAACTTGCTTGTTTACAGGTTGCAGAGGCAGAAAGTGTGAGCTTCAATTTATAGAGTATGTTATGCAAAATTCAAAAGTGTTACGTAGCATGACAATTCGCAGTGCCTCTTCCATAACTTTAAATGAAAAGCATGAAATGTTACGGAAATTATCTGTGTGCCCAAGGGGATGTAAACTTATATTTGATTGA

>MsG0280011351.01.T03

ATGATTTTATATGTTAACTCAACCTCTACATATCTTTGTTTTAATTCTCTTGATTGTTTACAGGACATCGAAAATGGAATTTATGAGGACAATTGGCAGGATCCAGAAATTGTTCCGGAATGCCTTTCATCTCAGCTAATAACTTGCTTGTTTACAGGTTGCAGAGGCAGAAAGTGTGAGCTTCAATTTATAGAGTATGTTATGCAAAATTCAAAAGTGTTACGTAGCATGACAATTCGCAGTGCCTCTTCCATAACTTTAAATGAAAAGCATGAAATGTTACGGAAATTATCTGTGTGCCCAAGGGGATGTAAACTTATATTTGATTGA

>MsG0280011351.01.T02

ATGTCTTCCTCCTCCTCTCATTTCCATAGATCCATTCCAACAGAAGATAGGCTTAGCTCCTTTCCAGATTCAATTATATCTCACATTCTCTCTTTTCTTCCAACCAAAGATTCTGTTGCCACAAGTGTCCTCTCAAAGCGGTGGAATCCATTATGGCTCTCGGTTCTTGATCTCAACTTTGACGCCCAAACCTTCGAAGACTACGTCACCTTTCGCCATGCCATATACTCAGTCATTGTATCACGAGATATCAAGCTGCCAATACGATCATTTCGCCTCAAATTTGGCATAGAATATGACATCAACGACATCAACAGATTTATTAAGGCAGCGATACTAAGTATGGTTTCTAATGTTTTGTCTGTGATGCAGATATCGCATAAGTACCTCAAAGTCGCCAATTATGACAGTCTGATCCAAATGGAGCTATTCTTCTTTAATTCTAATGGAAAAAGTTGGGGTGAAAAGTGGAAGTAG
Protein sequence

>MsG0280011351.01.T01

MSSSSSHFHRSIPTEDRLSSFPDSIISHILSFLPTKDSVATSVLSKRWNPLWLSVLDLNFDAQTFEDYDIENGIYEDNWQDPEIVPECLSSQLITCLFTGCRGRKCELQFIEYVMQNSKVLRSMTIRSASSITLNEKHEMLRKLSVCPRGCKLIFD*

>MsG0280011351.01.T03

MILYVNSTSTYLCFNSLDCLQDIENGIYEDNWQDPEIVPECLSSQLITCLFTGCRGRKCELQFIEYVMQNSKVLRSMTIRSASSITLNEKHEMLRKLSVCPRGCKLIFD*

>MsG0280011351.01.T02

MSSSSSHFHRSIPTEDRLSSFPDSIISHILSFLPTKDSVATSVLSKRWNPLWLSVLDLNFDAQTFEDYVTFRHAIYSVIVSRDIKLPIRSFRLKFGIEYDINDINRFIKAAILSMVSNVLSVMQISHKYLKVANYDSLIQMELFFFNSNGKSWGEKWK*