AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020620.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020620.01.T01 MTR_4g055990 55.305 443 51 7 244 550 1 432 9.30e-142 421
MsG0480020620.01.T01 MTR_4g055990 68.613 274 53 1 2 242 206 479 3.79e-115 352
MsG0480020620.01.T01 MTR_4g055990 55.305 443 51 7 244 550 1 432 1.42e-141 421
MsG0480020620.01.T01 MTR_4g055990 68.727 275 53 1 2 243 206 480 1.55e-115 353
MsG0480020620.01.T01 MTR_4g056040 55.059 425 68 5 244 550 1 420 2.90e-137 410
MsG0480020620.01.T01 MTR_4g056040 74.908 271 40 1 1 243 198 468 1.30e-130 393
MsG0480020620.01.T01 MTR_4g055580 54.567 427 75 7 243 550 91 517 1.26e-136 411
MsG0480020620.01.T01 MTR_4g055580 65.950 279 66 3 2 252 297 574 3.42e-111 345
MsG0480020620.01.T01 MTR_4g056020 69.123 285 59 2 2 258 169 452 5.45e-125 376
MsG0480020620.01.T01 MTR_4g056020 51.059 425 55 8 244 550 1 390 1.83e-115 352
MsG0480020620.01.T01 MTR_4g056070 83.043 230 11 1 1 202 208 437 3.50e-124 374
MsG0480020620.01.T01 MTR_4g056070 51.163 430 87 8 244 550 1 430 1.80e-118 359
MsG0480020620.01.T01 MTR_4g056030 65.385 286 71 1 2 259 169 454 8.26e-119 361
MsG0480020620.01.T01 MTR_4g056030 74.163 209 19 2 244 452 1 174 6.63e-94 296
MsG0480020620.01.T01 MTR_1g038710 59.108 269 78 3 4 242 185 451 1.37e-92 293
MsG0480020620.01.T01 MTR_1g038710 38.876 445 109 13 230 550 1 406 1.10e-63 217
MsG0480020620.01.T01 MTR_7g110920 54.007 287 82 4 4 243 38 321 1.09e-85 270
MsG0480020620.01.T01 MTR_7g110920 44.242 165 58 4 377 507 1 165 1.72e-24 105
MsG0480020620.01.T01 MTR_4g056010 93.000 100 7 0 346 445 1 100 1.27e-57 189
MsG0480020620.01.T01 MTR_4g056020 62.420 157 30 2 130 258 1 156 2.02e-52 177
MsG0480020620.01.T01 MTR_4g056020 58.108 74 26 1 477 550 26 94 6.41e-19 84.7
MsG0480020620.01.T01 MTR_1g090900 51.142 219 65 5 244 457 1 182 1.18e-51 176
MsG0480020620.01.T01 MTR_1g090883 59.873 157 62 1 3 158 179 335 6.28e-49 175
MsG0480020620.01.T01 MTR_1g090883 49.289 211 65 5 245 452 12 183 1.79e-46 168
MsG0480020620.01.T01 MTR_4g093690 43.922 255 89 7 244 484 10 224 2.80e-45 162
MsG0480020620.01.T01 MTR_4g093690 59.184 98 36 3 6 101 181 276 4.42e-19 88.2
MsG0480020620.01.T01 MTR_1g090890 66.304 92 25 2 155 243 29 117 8.36e-32 119
MsG0480020620.01.T01 MTR_1g090890 63.636 44 13 1 510 550 29 72 4.91e-11 60.8
MsG0480020620.01.T01 MTR_8g017280 29.452 292 149 12 229 506 11 259 1.66e-13 72.0
MsG0480020620.01.T01 MTR_8g017280 29.452 292 149 12 229 506 11 259 2.89e-13 72.4
MsG0480020620.01.T01 MTR_7g110910 39.516 124 52 3 173 281 80 195 1.71e-12 67.0
MsG0480020620.01.T01 MTR_8g014160 31.034 203 106 7 247 441 36 212 1.14e-11 67.4
MsG0480020620.01.T01 MTR_8g062270 28.571 196 109 5 252 441 16 186 9.38e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020620.01.T01 AT3G59190 31.937 191 102 4 252 441 12 175 8.22e-16 80.1
MsG0480020620.01.T01 AT3G59190 31.937 191 102 4 252 441 12 175 1.63e-15 80.1
MsG0480020620.01.T01 AT5G62970 36.453 203 108 10 252 448 2 189 2.54e-15 79.0
MsG0480020620.01.T01 AT3G59230 32.308 195 101 5 252 441 12 180 6.17e-15 78.2
MsG0480020620.01.T01 AT4G15060 27.536 276 143 9 175 442 106 332 3.38e-14 75.9
MsG0480020620.01.T01 AT1G58310 32.474 194 110 6 252 441 8 184 1.16e-12 70.9
MsG0480020620.01.T01 AT5G56410 34.518 197 101 11 252 441 2 177 1.57e-11 67.4
MsG0480020620.01.T01 AT3G59170 30.189 212 128 7 252 457 7 204 2.04e-11 67.0
MsG0480020620.01.T01 AT5G41830 30.137 219 108 7 233 441 2 185 2.14e-11 67.0
MsG0480020620.01.T01 AT3G03040 32.738 168 86 3 252 418 2 143 2.62e-11 66.6

Find 171 sgRNAs with CRISPR-Local

Find 667 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTACATTTGAATTTAA+AGG 0.124626 4:-44847258 MsG0480020620.01.T01:CDS
CGAATCAAAAGCAATTTCTT+AGG 0.165871 4:-44857876 MsG0480020620.01.T01:five_prime_UTR
CTTGCAAACTCATACTTTCT+AGG 0.189881 4:+44855984 None:intergenic
AGTTTCCAACCTCCTTTCTT+TGG 0.204522 4:+44847328 None:intergenic
CTCGTTACATTTGAATTTAA+AGG 0.204847 4:-44855186 MsG0480020620.01.T01:CDS
CTGTCTCTCTTGCATTAGTT+TGG 0.282510 4:+44848664 None:intergenic
CTATATTCTCGGTGCGTCTT+TGG 0.284156 4:+44848687 None:intergenic
TCACAGTTTGTTATATTTAT+CGG 0.293701 4:-44855694 MsG0480020620.01.T01:intron
GCAGACTGACTCCCATCTTT+TGG 0.296189 4:+44856731 None:intergenic
GCAGATCGACTCCCATCTTT+TGG 0.302315 4:+44848793 None:intergenic
GTTTCCAACCTCCTTTCTTT+GGG 0.310062 4:+44847329 None:intergenic
AGTTTCCAACCTCCTTTCTT+CGG 0.314970 4:+44855256 None:intergenic
AGAGACCAGCCTCGAATTCT+TGG 0.323717 4:-44845123 MsG0480020620.01.T01:intron
AGAAATCCTCCGTACCAGTA+TGG 0.334848 4:-44855029 MsG0480020620.01.T01:CDS
CATTAGTTTGGCTATATTCT+CGG 0.336654 4:+44848676 None:intergenic
GCTTTCCATTTGTAAGCTTC+CGG 0.343112 4:-44855937 MsG0480020620.01.T01:CDS
GTTTCCAACCTCCTTTCTTC+GGG 0.346723 4:+44855257 None:intergenic
GAGCCAAGCTCTCGAATTCT+TGG 0.349304 4:-44845096 MsG0480020620.01.T01:CDS
CACTGAAGGCTCCACCCATC+TGG 0.366063 4:+44847305 None:intergenic
TCTATCTGGTTGTCCTCGTC+TGG 0.383558 4:-44856177 MsG0480020620.01.T01:CDS
TGTGATGTATTCTATCTTTG+AGG 0.387279 4:-44856228 MsG0480020620.01.T01:exon
CGAAAGCAAGCTGTAAAGAT+AGG 0.388871 4:+44856640 None:intergenic
ACCGTGGGACATTTGTTTCA+TGG 0.390338 4:+44845222 None:intergenic
ACAAATCCAGGTCAAGTTCC+TGG 0.406926 4:+44856398 None:intergenic
ACTCGTGGTCTTAAAATTGC+GGG 0.408358 4:-44848402 MsG0480020620.01.T01:CDS
ACTCGTGGTCTTAAAATTGC+GGG 0.408358 4:-44856327 MsG0480020620.01.T01:five_prime_UTR
ACTTTCTAATGTCAAATCAT+TGG 0.410912 4:-44855883 MsG0480020620.01.T01:CDS
AAGTAGGCATAAATAAATAA+AGG 0.417351 4:+44856084 None:intergenic
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4:+44848769 None:intergenic
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4:+44856707 None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4:+44848474 None:intergenic
AACTTAGGAAGGTTATTCAT+AGG 0.422625 4:-44845259 MsG0480020620.01.T01:CDS
ATTTCTTCTTTGGACATCAC+AGG 0.436128 4:+44848725 None:intergenic
CATCAAGTGGCTGGTATGGC+TGG 0.440456 4:+44856566 None:intergenic
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4:+44848761 None:intergenic
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4:+44856699 None:intergenic
TAGAATACATCACAGTTTCA+TGG 0.447817 4:+44856237 None:intergenic
GAATCAAAAGCAATTTCTTA+GGG 0.448905 4:-44857875 MsG0480020620.01.T01:five_prime_UTR
TATTTGCATTTGTAAGCGTC+TGG 0.451435 4:-44848016 MsG0480020620.01.T01:CDS
AAGCCTAGCTCGATCAAGAT+TGG 0.452512 4:+44855956 None:intergenic
AATGTCAAAACATTGGTTCT+CGG 0.452658 4:-44847955 MsG0480020620.01.T01:CDS
TAGAAAGAACTTCGAGTGAC+GGG 0.453462 4:+44856027 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4:-44848480 MsG0480020620.01.T01:CDS
ACCAAGACTCTCGAATCTCT+TGG 0.457930 4:-44845065 MsG0480020620.01.T01:CDS
TGTAAACTTCATACCCATAC+TGG 0.457935 4:+44855015 None:intergenic
ATTTCTTCTTTCGATATCAC+AGG 0.458999 4:+44856663 None:intergenic
CTAACGTTTGATAGTGAGAA+AGG 0.464525 4:-44856592 MsG0480020620.01.T01:five_prime_UTR
GGCTCTCCTCCAAGAATTCG+AGG 0.465320 4:+44845114 None:intergenic
AAATTCAAATGTAATGAGAC+TGG 0.466724 4:+44847263 None:intergenic
CATGTGTTCTATCCAAAAGA+TGG 0.467948 4:-44848805 MsG0480020620.01.T01:CDS
CATGTGTTCTATCCAAAAGA+TGG 0.467948 4:-44856743 MsG0480020620.01.T01:five_prime_UTR
TTTCATGCAGAAACAAATCC+AGG 0.472087 4:+44856386 None:intergenic
TCTCAACTCACGAATTCAAA+AGG 0.474670 4:-44857412 MsG0480020620.01.T01:intron
TCAAATCAATTCCCGAAGAA+AGG 0.482837 4:-44855268 MsG0480020620.01.T01:CDS
AAATTCAAATGTAACGAGAC+TGG 0.485332 4:+44855191 None:intergenic
ACGCTAAGAACGAATGAAGT+AGG 0.493343 4:+44857849 None:intergenic
TGTTACCCAGATATCAACTT+AGG 0.494057 4:-44845274 MsG0480020620.01.T01:intron
GTATACAAATTGTTAAAATC+CGG 0.494166 4:+44855918 None:intergenic
CAAGGTCCAGGAACTTGACC+TGG 0.494419 4:-44856404 MsG0480020620.01.T01:five_prime_UTR
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4:-44848492 MsG0480020620.01.T01:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4:-44856416 MsG0480020620.01.T01:five_prime_UTR
TGTACACATGTGGGTTTCAA+AGG 0.501751 4:-44848621 MsG0480020620.01.T01:CDS
ATCACAGGGTCTGAAATCTC+TGG 0.502995 4:+44856678 None:intergenic
CCTCCAAGAATTCGAGAGCT+TGG 0.503482 4:+44845093 None:intergenic
AAAATCCGGAAGCTTACAAA+TGG 0.505532 4:+44855932 None:intergenic
TGAAATCAACTCCCAAAGAA+AGG 0.507406 4:-44847340 MsG0480020620.01.T01:CDS
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 4:-44855247 MsG0480020620.01.T01:CDS
TTCAAAACATAAAACTGAGT+TGG 0.511274 4:-44847233 MsG0480020620.01.T01:CDS
GTGACTCACACGTGGAAAGC+CGG 0.517166 4:+44856348 None:intergenic
CCAAGCTCTCGAATTCTTGG+AGG 0.518022 4:-44845093 MsG0480020620.01.T01:CDS
CGGTGCGTCTTTGGAAAGCA+AGG 0.521282 4:+44848696 None:intergenic
GGTACATCAAGTGGCTGGTA+TGG 0.523834 4:+44856562 None:intergenic
TCCAAGAGATTCGAGAGTCT+TGG 0.524210 4:+44845064 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4:-44848513 MsG0480020620.01.T01:CDS
TTGAGTGAGTGAGTGAGTGT+TGG 0.529349 4:+44857950 None:intergenic
ATCACAGGGTCTGAAATCTC+TGG 0.529937 4:+44848740 None:intergenic
GAAATCCTCCGTACCAGTAT+GGG 0.530012 4:-44855028 MsG0480020620.01.T01:intron
CCGAAAATATAAGAAAACTA+AGG 0.538047 4:-44848568 MsG0480020620.01.T01:CDS
CACTCGTGGTCTTAAAATTG+CGG 0.539007 4:-44848403 MsG0480020620.01.T01:CDS
CACTCGTGGTCTTAAAATTG+CGG 0.539007 4:-44856328 MsG0480020620.01.T01:five_prime_UTR
TGTCCAATCTTGATCGAGCT+AGG 0.540794 4:-44855959 MsG0480020620.01.T01:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4:-44848498 MsG0480020620.01.T01:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4:-44856422 MsG0480020620.01.T01:five_prime_UTR
TTTCTTCTTTGGACATCACA+GGG 0.548590 4:+44848726 None:intergenic
GACCAGCCTCGAATTCTTGG+AGG 0.549199 4:-44845120 MsG0480020620.01.T01:intron
CAACACGTAATAACAGAAGT+AGG 0.549259 4:+44856068 None:intergenic
CCTGCGTTCAGCTTAGGTCA+TGG 0.550584 4:-44856862 MsG0480020620.01.T01:intron
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4:+44848760 None:intergenic
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4:+44856698 None:intergenic
TTAACAATTTGTATACACTC+TGG 0.552358 4:-44855911 MsG0480020620.01.T01:CDS
AATGTCAAATCATTGGCTCT+CGG 0.552626 4:-44855876 MsG0480020620.01.T01:CDS
CTAAGGCTTCGTAGCGACAA+AGG 0.553006 4:-44848551 MsG0480020620.01.T01:CDS
CCGAAAATATAAGAAAACTT+AGG 0.553012 4:-44856492 MsG0480020620.01.T01:five_prime_UTR
TAAGTGAAAAGAGATGTTGA+TGG 0.554261 4:+44856121 None:intergenic
AATTCGTGAGTTGAGAGTAA+CGG 0.555202 4:+44857419 None:intergenic
AGCCACATGATGTGCACATG+TGG 0.563390 4:-44856447 MsG0480020620.01.T01:five_prime_UTR
ATGTGTTCTATCCAAAAGAT+GGG 0.563690 4:-44848804 MsG0480020620.01.T01:CDS
ATGTGTTCTATCCAAAAGAT+GGG 0.563690 4:-44856742 MsG0480020620.01.T01:five_prime_UTR
GACGGGGCATTAATTTGTAG+TGG 0.566180 4:+44856044 None:intergenic
TCAAGACATAGAAACTGAGT+TGG 0.567178 4:-44855160 MsG0480020620.01.T01:CDS
TAGAATACCTCACAGTTTCA+CGG 0.569419 4:+44848312 None:intergenic
ACCCACATGTGTACATTATG+TGG 0.569448 4:+44848629 None:intergenic
CTTAGGCTTCATAGTGACAA+AGG 0.569497 4:-44856475 MsG0480020620.01.T01:five_prime_UTR
AACTCCCAAAGAAAGGAGGT+TGG 0.569947 4:-44847333 MsG0480020620.01.T01:CDS
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 4:-44855248 MsG0480020620.01.T01:CDS
ACTTTCGAATGTCAAAACAT+TGG 0.572766 4:-44847962 MsG0480020620.01.T01:CDS
AACCACATGGGTACATCAAG+TGG 0.577665 4:+44856553 None:intergenic
AAGTGAAAAGAGATGTTGAT+GGG 0.577961 4:+44856122 None:intergenic
ATCTGGTTGTCCTCGTCTGG+AGG 0.578131 4:-44856174 MsG0480020620.01.T01:CDS
TGTTATGCAGTTTCTCAGCA+AGG 0.578720 4:-44855751 MsG0480020620.01.T01:intron
AATAGCAGCTTCATCAAGAG+TGG 0.581159 4:+44848035 None:intergenic
ACCCAGATATCAACTTAGGA+AGG 0.581463 4:-44845270 MsG0480020620.01.T01:intron
CGGTAAATATACATGAAAAG+AGG 0.581610 4:+44856280 None:intergenic
TGTGCACATGTGGGTTTCAA+AGG 0.585269 4:-44856437 MsG0480020620.01.T01:five_prime_UTR
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4:+44848368 None:intergenic
GGTGGAGCCATCAGTGACTC+CGG 0.588696 4:-44855226 MsG0480020620.01.T01:CDS
AGACTGGTTGTAAGACATGC+CGG 0.589947 4:+44847279 None:intergenic
TCACTCAAGTAAGTTAGAGA+AGG 0.590412 4:-44855115 MsG0480020620.01.T01:CDS
AATTCCCGAAGAAAGGAGGT+TGG 0.591474 4:-44855261 MsG0480020620.01.T01:CDS
GGTGGAGCCTTCAGTGACTC+CGG 0.594165 4:-44847298 MsG0480020620.01.T01:CDS
AATTTGTATACACTCTGGAA+AGG 0.599787 4:-44855906 MsG0480020620.01.T01:CDS
AGACTGGTTGTAAGACATGC+CGG 0.603083 4:+44855207 None:intergenic
GATGTTGATGGGTATTCGAA+AGG 0.603601 4:+44856133 None:intergenic
AATCAATTCCCGAAGAAAGG+AGG 0.603702 4:-44855265 MsG0480020620.01.T01:CDS
AAATGCCTTTGAAAACCACA+TGG 0.604514 4:+44856540 None:intergenic
ACTTCATACCCATACTGGTA+CGG 0.607033 4:+44855020 None:intergenic
ATAGAAAGAACTTCGAGTGA+CGG 0.607597 4:+44856026 None:intergenic
AGACATGCCGGAGTCACTGA+TGG 0.608044 4:+44855219 None:intergenic
ACATGGGTACATCAAGTGGC+TGG 0.611487 4:+44856557 None:intergenic
TGAAAAGAGGAATTGAGTGT+TGG 0.612345 4:+44856293 None:intergenic
AGACATGCCGGAGTCACTGA+AGG 0.615639 4:+44847291 None:intergenic
AGGAGGTTGGAAACTCCAGA+TGG 0.616739 4:-44847320 MsG0480020620.01.T01:CDS
TTTCTTCTTTCGATATCACA+GGG 0.620763 4:+44856664 None:intergenic
GGTTGGAAACTCGAGTTGGG+TGG 0.621687 4:-44855244 MsG0480020620.01.T01:CDS
CAAGCTCTCGAATTCTTGGA+GGG 0.624556 4:-44845092 MsG0480020620.01.T01:CDS
AATTTGTATACACTCATGAA+AGG 0.627380 4:-44847985 MsG0480020620.01.T01:CDS
ACATGTGTACATTATGTGGC+TGG 0.630203 4:+44848633 None:intergenic
TTCCACGTGTGAGTCACTCG+TGG 0.631019 4:-44848417 MsG0480020620.01.T01:CDS
TTCCACGTGTGAGTCACTCG+TGG 0.631019 4:-44856342 MsG0480020620.01.T01:five_prime_UTR
TCATACCCATACTGGTACGG+AGG 0.635438 4:+44855023 None:intergenic
ACTAATGCAAGAGAGACAGA+TGG 0.635475 4:-44848660 MsG0480020620.01.T01:CDS
AAAAGAAGTTCCTCCAGACG+AGG 0.636459 4:+44856164 None:intergenic
GGTTGGAAACTCCAGATGGG+TGG 0.638430 4:-44847316 MsG0480020620.01.T01:CDS
ACCCACATGTGCACATCATG+TGG 0.642533 4:+44856445 None:intergenic
AGCCACATAATGTACACATG+TGG 0.643957 4:-44848631 MsG0480020620.01.T01:CDS
CTAATGCAAGAGAGACAGAT+GGG 0.644579 4:-44848659 MsG0480020620.01.T01:CDS
GCCACATAATGTACACATGT+GGG 0.648388 4:-44848630 MsG0480020620.01.T01:CDS
GCCACATGATGTACACATGT+GGG 0.650684 4:-44848522 MsG0480020620.01.T01:CDS
GGAGGTTGGAAACTCCAGAT+GGG 0.652028 4:-44847319 MsG0480020620.01.T01:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4:+44848525 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4:+44848335 None:intergenic
AGGTATTCTATGTTTGATGA+CGG 0.657979 4:-44848299 MsG0480020620.01.T01:intron
TCCATGAAACAAATGTCCCA+CGG 0.661137 4:-44845223 MsG0480020620.01.T01:intron
AGATGAAGAATCTTTAGTGA+CGG 0.666233 4:+44856260 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.672342 4:+44848521 None:intergenic
AATCAACTCCCAAAGAAAGG+AGG 0.673141 4:-44847337 MsG0480020620.01.T01:CDS
TTCATCTCCGTGAAACTGTG+AGG 0.673351 4:-44848319 MsG0480020620.01.T01:CDS
GCCACATGATGTGCACATGT+GGG 0.673788 4:-44856446 MsG0480020620.01.T01:five_prime_UTR
CTCGTGGTCTTAAAATTGCG+GGG 0.673910 4:-44848401 MsG0480020620.01.T01:CDS
CTCGTGGTCTTAAAATTGCG+GGG 0.673910 4:-44856326 MsG0480020620.01.T01:five_prime_UTR
AGAAAGAACTTCGAGTGACG+GGG 0.677033 4:+44856028 None:intergenic
TCACACGTGGAAAGCCGGAG+CGG 0.680905 4:+44856353 None:intergenic
GACCACGAGTGACTCACACG+TGG 0.682798 4:+44848415 None:intergenic
GACCACGAGTGACTCACACG+TGG 0.682798 4:+44856340 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4:-44848523 MsG0480020620.01.T01:CDS
AATGCCTTTGAAAACCACAT+GGG 0.691716 4:+44856541 None:intergenic
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4:+44848756 None:intergenic
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4:+44856694 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4:+44848428 None:intergenic
TATGCAGTTTCTCAGCAAGG+AGG 0.705951 4:-44855748 MsG0480020620.01.T01:intron
AGCCACTTGATGTACCCATG+TGG 0.742390 4:-44856555 MsG0480020620.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTTTAAATAAAAA+TGG + Chr4:44851520-44851539 None:intergenic 0.0%
!! AAAAAGTTGAAATATTTATA+GGG - Chr4:44851416-44851435 MsG0480020620.01.T01:intron 10.0%
!! ATAACAAATATTTATGTATT+TGG + Chr4:44850601-44850620 None:intergenic 10.0%
!! ATGACTTAAATTTATTTATT+GGG + Chr4:44848782-44848801 None:intergenic 10.0%
!! GAATTAATTAAATTGTTTAT+CGG + Chr4:44855509-44855528 None:intergenic 10.0%
!! TAATAAAATAGTTTAAAAGA+AGG + Chr4:44847659-44847678 None:intergenic 10.0%
!! TAATGTAATTAAAAAATTTG+AGG + Chr4:44856293-44856312 None:intergenic 10.0%
!! TTGAAAAAGAAAAATATTTA+TGG + Chr4:44855141-44855160 None:intergenic 10.0%
!! TTTAAAAGATGAAATATAAT+AGG - Chr4:44855420-44855439 MsG0480020620.01.T01:intron 10.0%
!!! AAAAATTCTAATGATAATTT+TGG - Chr4:44847737-44847756 MsG0480020620.01.T01:intron 10.0%
!!! AATTTTTTAAATAAAAATGG+AGG + Chr4:44851517-44851536 None:intergenic 10.0%
!!! ATTTTTTAAATAAAAATGGA+GGG + Chr4:44851516-44851535 None:intergenic 10.0%
!!! GAATTAATTAATTTGTTTAT+CGG + Chr4:44847586-44847605 None:intergenic 10.0%
!!! TAAATTAAGTTATTTCAAAT+GGG - Chr4:44852645-44852664 MsG0480020620.01.T01:intron 10.0%
!!! TATTTTTTAATGAAAAAAGT+TGG - Chr4:44848090-44848109 MsG0480020620.01.T01:intron 10.0%
!!! TTAAATTAAGTTATTTCAAA+TGG - Chr4:44852644-44852663 MsG0480020620.01.T01:intron 10.0%
!! AAATATAATAATCTCAAATC+TGG - Chr4:44847510-44847529 MsG0480020620.01.T01:intron 15.0%
!! ACTTAAAATCAAATCAAAAT+TGG + Chr4:44845871-44845890 None:intergenic 15.0%
!! AGTTATATTAAAACTTATAG+TGG - Chr4:44848445-44848464 MsG0480020620.01.T01:CDS 15.0%
!! ATAGTGATATATAAATATAC+AGG + Chr4:44850211-44850230 None:intergenic 15.0%
!! CAAAAAGTTGAAATATTTAT+AGG - Chr4:44851415-44851434 MsG0480020620.01.T01:intron 15.0%
!! CTTATAATATTCTAAACATT+CGG + Chr4:44851154-44851173 None:intergenic 15.0%
!! GATAACAAAAACAAAAAAAA+TGG + Chr4:44849580-44849599 None:intergenic 15.0%
!! GATGACTTAAATTTATTTAT+TGG + Chr4:44848783-44848802 None:intergenic 15.0%
!! GTTTAATTCATTAAAAATAC+TGG + Chr4:44851458-44851477 None:intergenic 15.0%
!! TAAAGTATATAAACTTTGTA+TGG + Chr4:44848072-44848091 None:intergenic 15.0%
!! TGATATATTGTAAATAGTTT+CGG + Chr4:44847713-44847732 None:intergenic 15.0%
!! TTAAAATCAATAGTTCATAT+TGG + Chr4:44856654-44856673 None:intergenic 15.0%
!! TTAGTAATTAAAAACATTAG+TGG + Chr4:44850875-44850894 None:intergenic 15.0%
!! TTCGCAATTTATATATTTAA+CGG - Chr4:44855271-44855290 MsG0480020620.01.T01:CDS 15.0%
!!! AAATTAAGTTATTTCAAATG+GGG - Chr4:44852646-44852665 MsG0480020620.01.T01:intron 15.0%
!!! ATTAAAAATTTGTTGTTTTC+TGG + Chr4:44851954-44851973 None:intergenic 15.0%
!!! ATTAACACAATTTCTAAAAA+GGG + Chr4:44851877-44851896 None:intergenic 15.0%
!!! GTTTTAATTCTTTTTAACAA+TGG + Chr4:44851239-44851258 None:intergenic 15.0%
!!! TAGTTTTTTTTTTTCAGTTT+TGG - Chr4:44849224-44849243 MsG0480020620.01.T01:intron 15.0%
!!! TCTAATGATTTTATCATTTA+TGG - Chr4:44848312-44848331 MsG0480020620.01.T01:CDS 15.0%
!!! TTTTTTTTTTTGTTCAGTTT+TGG - Chr4:44857125-44857144 MsG0480020620.01.T01:intron 15.0%
!! AAAAATAGAGTCAAAATAGT+AGG - Chr4:44852616-44852635 MsG0480020620.01.T01:intron 20.0%
!! AAATGAACTTATATGTGTAA+AGG + Chr4:44849722-44849741 None:intergenic 20.0%
!! AACAAAAACAAAAAAAATGG+AGG + Chr4:44849577-44849596 None:intergenic 20.0%
!! AAGAGATTTCAAAAGATTTA+AGG - Chr4:44849461-44849480 MsG0480020620.01.T01:intron 20.0%
!! AAGTAGGCATAAATAAATAA+AGG + Chr4:44846966-44846985 None:intergenic 20.0%
!! AATATAACACTAATTCACTA+TGG + Chr4:44856857-44856876 None:intergenic 20.0%
!! AATGAGAATAGAATTGAATA+TGG + Chr4:44855186-44855205 None:intergenic 20.0%
!! AATTCAATTGAAGATCATTT+GGG - Chr4:44848379-44848398 MsG0480020620.01.T01:CDS 20.0%
!! AATTGGATATTTCAACAAAT+TGG - Chr4:44852270-44852289 MsG0480020620.01.T01:intron 20.0%
!! ACGTAAAATAGTTTAAAAGA+AGG + Chr4:44855583-44855602 None:intergenic 20.0%
!! AGGAAATTAGAAATTCATTA+TGG - Chr4:44857876-44857895 MsG0480020620.01.T01:five_prime_UTR 20.0%
!! AGTATATAATAAACTCTGTA+TGG + Chr4:44855999-44856018 None:intergenic 20.0%
!! AGTTTAAAAGAAGGTTAAAT+TGG + Chr4:44847650-44847669 None:intergenic 20.0%
!! ATGAGAATAGAATTGAATAT+GGG + Chr4:44855185-44855204 None:intergenic 20.0%
!! ATTGGATATTTCAACAAATT+GGG - Chr4:44852271-44852290 MsG0480020620.01.T01:intron 20.0%
!! ATTTCATTCATTCATTCTTA+GGG - Chr4:44852791-44852810 MsG0480020620.01.T01:intron 20.0%
!! CTCATTACATTTGAATTTAA+AGG - Chr4:44855789-44855808 MsG0480020620.01.T01:intron 20.0%
!! GATAATGAATCAATTATTGT+AGG - Chr4:44848972-44848991 MsG0480020620.01.T01:intron 20.0%
!! GGAAATTAGAAATTCATTAT+GGG - Chr4:44857877-44857896 MsG0480020620.01.T01:five_prime_UTR 20.0%
!! GTATACAAATTGTTAAAATC+CGG + Chr4:44847132-44847151 None:intergenic 20.0%
!! GTTTAAAAGAAGGTTAAATT+GGG + Chr4:44847649-44847668 None:intergenic 20.0%
!! TAAAAGAAGGTTAAATTGAT+AGG + Chr4:44847646-44847665 None:intergenic 20.0%
!! TAAGTAATGAAGGAAATTAT+TGG + Chr4:44851903-44851922 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG - Chr4:44848378-44848397 MsG0480020620.01.T01:CDS 20.0%
!! TATAAACCAAAAAATGTCAT+TGG - Chr4:44845972-44845991 MsG0480020620.01.T01:intron 20.0%
!! TATTTCATTCATTCATTCTT+AGG - Chr4:44852790-44852809 MsG0480020620.01.T01:intron 20.0%
!! TGATAAGCAAATTAAAATGT+TGG + Chr4:44850445-44850464 None:intergenic 20.0%
!! TTAATTATTCAATTTGTCAC+AGG - Chr4:44856369-44856388 MsG0480020620.01.T01:five_prime_UTR 20.0%
!! TTTAAACTGAAACCATAAAA+TGG - Chr4:44851974-44851993 MsG0480020620.01.T01:intron 20.0%
!!! AACTGACTTCTTAATTAATT+AGG - Chr4:44850537-44850556 MsG0480020620.01.T01:intron 20.0%
!!! AATTAAGTTATTTCAAATGG+GGG - Chr4:44852647-44852666 MsG0480020620.01.T01:intron 20.0%
!!! AATTATTCAATATTTGCTAC+AGG - Chr4:44848351-44848370 MsG0480020620.01.T01:CDS 20.0%
!!! AATTCATCATTTTGTTATTG+TGG + Chr4:44850161-44850180 None:intergenic 20.0%
!!! ATTTTTTATGAAGGGTAATA+TGG - Chr4:44853741-44853760 MsG0480020620.01.T01:intron 20.0%
!!! CAATGTTTATGATATTGTTT+TGG - Chr4:44853384-44853403 MsG0480020620.01.T01:intron 20.0%
!!! CCTAAGTTTTCTTATATTTT+CGG + Chr4:44846558-44846577 None:intergenic 20.0%
!!! CCTTAGTTTTCTTATATTTT+CGG + Chr4:44854482-44854501 None:intergenic 20.0%
!!! CTATTGATAATGTGATTTTA+GGG - Chr4:44853185-44853204 MsG0480020620.01.T01:intron 20.0%
!!! CTTTGATGACTTAAATTTAT+GGG + Chr4:44848787-44848806 None:intergenic 20.0%
!!! CTTTTTCATTTCTAAGATAA+AGG - Chr4:44849387-44849406 MsG0480020620.01.T01:intron 20.0%
!!! GAAAATCTAACGATAATTTT+TGG - Chr4:44855663-44855682 MsG0480020620.01.T01:intron 20.0%
!!! GATTAACACAATTTCTAAAA+AGG + Chr4:44851878-44851897 None:intergenic 20.0%
!!! GTTTTAACATTTTCAAATCA+TGG - Chr4:44853543-44853562 MsG0480020620.01.T01:intron 20.0%
!!! TAAAAAGGGTATATTTTCTA+TGG + Chr4:44851863-44851882 None:intergenic 20.0%
!!! TATGTTTTAATGAAAAGAGT+TGG - Chr4:44856020-44856039 MsG0480020620.01.T01:CDS 20.0%
!!! TATTTTAAAAATATCCATCG+AGG - Chr4:44852537-44852556 MsG0480020620.01.T01:intron 20.0%
!!! TCACAGTTTGTTATATTTAT+CGG - Chr4:44847353-44847372 MsG0480020620.01.T01:intron 20.0%
!!! TCTAGTATTGATAATCATTT+AGG + Chr4:44857238-44857257 None:intergenic 20.0%
!!! TGATCTATGAGATTTTATTT+TGG - Chr4:44857173-44857192 MsG0480020620.01.T01:intron 20.0%
!!! TGTTATCTATTTTATGTTCT+GGG - Chr4:44849593-44849612 MsG0480020620.01.T01:intron 20.0%
!!! TTAATTTGCTTATCAAGAAA+TGG - Chr4:44850450-44850469 MsG0480020620.01.T01:intron 20.0%
!!! TTGTATTTTCAGATTTATTG+TGG - Chr4:44849042-44849061 MsG0480020620.01.T01:intron 20.0%
!!! TTGTTATCTATTTTATGTTC+TGG - Chr4:44849592-44849611 MsG0480020620.01.T01:intron 20.0%
!!! TTTTCACATTTTTCTGATAA+AGG + Chr4:44853464-44853483 None:intergenic 20.0%
!!! TTTTGATAAGTAGATTAAGA+GGG + Chr4:44856454-44856473 None:intergenic 20.0%
!!! TTTTTTATGAAGGGTAATAT+GGG - Chr4:44853742-44853761 MsG0480020620.01.T01:intron 20.0%
!!! TTTTTTTTTCTTCATTCATC+TGG - Chr4:44848528-44848547 MsG0480020620.01.T01:CDS 20.0%
! AAAAAAATGGAGGTAATTTG+AGG + Chr4:44849567-44849586 None:intergenic 25.0%
! AAAAAATTGGAAGTGAAAAG+TGG - Chr4:44852098-44852117 MsG0480020620.01.T01:intron 25.0%
! AAAGTTATGAACTTTGAACT+TGG - Chr4:44850917-44850936 MsG0480020620.01.T01:intron 25.0%
! AAATTCAAATGTAATGAGAC+TGG + Chr4:44855787-44855806 None:intergenic 25.0%
! AACATTTGTAAAAACATTGC+CGG - Chr4:44853934-44853953 MsG0480020620.01.T01:intron 25.0%
! AAGTAACAAATCTTAGGAAT+AGG + Chr4:44854021-44854040 None:intergenic 25.0%
! AAGTTATGAACTTTGAACTT+GGG - Chr4:44850918-44850937 MsG0480020620.01.T01:intron 25.0%
! AATTTGTATACACTCATGAA+AGG - Chr4:44855062-44855081 MsG0480020620.01.T01:CDS 25.0%
! ACAAAAGCAAACAATTAAAC+GGG - Chr4:44850076-44850095 MsG0480020620.01.T01:intron 25.0%
! ACTTTCTAATGTCAAATCAT+TGG - Chr4:44847164-44847183 MsG0480020620.01.T01:intron 25.0%
! ATAAAATGGAGATATGAAGA+TGG - Chr4:44851988-44852007 MsG0480020620.01.T01:intron 25.0%
! ATAAGATTAACCAAGAATAG+TGG + Chr4:44845556-44845575 None:intergenic 25.0%
! ATATAAAGATAAAGCTGTGT+TGG + Chr4:44856127-44856146 None:intergenic 25.0%
! ATATGAGTGAGAAAAATACT+CGG + Chr4:44845072-44845091 None:intergenic 25.0%
! ATATTTCCCATTGACAATAT+AGG - Chr4:44852377-44852396 MsG0480020620.01.T01:intron 25.0%
! ATGAATGAAGAACAAAAAAC+AGG + Chr4:44856543-44856562 None:intergenic 25.0%
! ATGTTGGCAAATTAAAATGT+TGG + Chr4:44850429-44850448 None:intergenic 25.0%
! ATTAATAAACAAAACATGCC+TGG + Chr4:44849126-44849145 None:intergenic 25.0%
! ATTATCAATACTAGAAGTCA+GGG - Chr4:44857243-44857262 MsG0480020620.01.T01:intron 25.0%
! CACAAAAGCAAACAATTAAA+CGG - Chr4:44850075-44850094 MsG0480020620.01.T01:intron 25.0%
! CCGAAAATATAAGAAAACTA+AGG - Chr4:44854479-44854498 MsG0480020620.01.T01:intron 25.0%
! CCGAAAATATAAGAAAACTT+AGG - Chr4:44846555-44846574 MsG0480020620.01.T01:intron 25.0%
! CCTAAAATCACATTATCAAT+AGG + Chr4:44853187-44853206 None:intergenic 25.0%
! CCTTAAATCACATTATCAAT+CGG + Chr4:44845805-44845824 None:intergenic 25.0%
! CTATTTACTATATATCCAGT+TGG - Chr4:44855641-44855660 MsG0480020620.01.T01:intron 25.0%
! CTCGTTACATTTGAATTTAA+AGG - Chr4:44847861-44847880 MsG0480020620.01.T01:intron 25.0%
! CTTAAATCACATTATCAATC+GGG + Chr4:44845804-44845823 None:intergenic 25.0%
! CTTATATCATCTTAAACATG+AGG + Chr4:44857378-44857397 None:intergenic 25.0%
! GAATCAAAAGCAATTTCTTA+GGG - Chr4:44845172-44845191 MsG0480020620.01.T01:intron 25.0%
! GTCTATAATTATGAAAGCTT+CGG - Chr4:44853268-44853287 MsG0480020620.01.T01:intron 25.0%
! GTTAAAAGAGGGAAAAAAAT+TGG - Chr4:44852085-44852104 MsG0480020620.01.T01:intron 25.0%
! GTTAAGTGCTAAAAAACAAA+GGG + Chr4:44845311-44845330 None:intergenic 25.0%
! TAAAAAATCACCAACATTGT+TGG + Chr4:44853729-44853748 None:intergenic 25.0%
! TAATCTCCTATATTGTCAAT+GGG + Chr4:44852386-44852405 None:intergenic 25.0%
! TACAGTAACAACAAAAAACA+AGG + Chr4:44845838-44845857 None:intergenic 25.0%
! TACATGAGTTTACTTAAAAC+AGG - Chr4:44851326-44851345 MsG0480020620.01.T01:intron 25.0%
! TACTTATCAAAAGCTTATAC+TGG - Chr4:44856462-44856481 MsG0480020620.01.T01:five_prime_UTR 25.0%
! TGTATATACTATTACATTCG+TGG - Chr4:44848223-44848242 MsG0480020620.01.T01:intron 25.0%
! TGTGGGACAAATAAAAAAAA+AGG - Chr4:44850693-44850712 MsG0480020620.01.T01:intron 25.0%
! TGTTAAGTGCTAAAAAACAA+AGG + Chr4:44845312-44845331 None:intergenic 25.0%
! TTAACAATTTGTATACACTC+TGG - Chr4:44847136-44847155 MsG0480020620.01.T01:intron 25.0%
! TTAAGATAGAAGTTTGTCTT+AGG + Chr4:44850727-44850746 None:intergenic 25.0%
! TTAAGTGCTAAAAAACAAAG+GGG + Chr4:44845310-44845329 None:intergenic 25.0%
! TTAATAAACAAAACATGCCT+GGG + Chr4:44849125-44849144 None:intergenic 25.0%
! TTAATCTCCTATATTGTCAA+TGG + Chr4:44852387-44852406 None:intergenic 25.0%
! TTCAAAACATAAAACTGAGT+TGG - Chr4:44855814-44855833 MsG0480020620.01.T01:intron 25.0%
! TTGTACTGTTTCATTCAAAA+TGG - Chr4:44852124-44852143 MsG0480020620.01.T01:intron 25.0%
!! AAGTTGGCATGTTAATATTT+TGG - Chr4:44848106-44848125 MsG0480020620.01.T01:intron 25.0%
!! ACAAAATGATGGAAAATAGA+GGG + Chr4:44853997-44854016 None:intergenic 25.0%
!! ACTGCTAGAATTTGAATTTT+AGG - Chr4:44845768-44845787 MsG0480020620.01.T01:intron 25.0%
!! ACTTTTGAATGATCAAAAGT+CGG + Chr4:44851054-44851073 None:intergenic 25.0%
!! AGGTTTAAATACGTTTTTGA+TGG - Chr4:44850978-44850997 MsG0480020620.01.T01:intron 25.0%
!! AGTTGGTATCTTAATATTGT+TGG - Chr4:44856037-44856056 MsG0480020620.01.T01:CDS 25.0%
!! ATCTTCATATCTCCATTTTA+TGG + Chr4:44851989-44852008 None:intergenic 25.0%
!! CAATTAGTCTGTGAATTTAA+CGG + Chr4:44852255-44852274 None:intergenic 25.0%
!! CAGTGATTTTTATCTCTTTT+GGG - Chr4:44853351-44853370 MsG0480020620.01.T01:intron 25.0%
!! CTTGAGAATATACGATATTT+TGG + Chr4:44857656-44857675 None:intergenic 25.0%
!! CTTTTGATAAGTAGATTAAG+AGG + Chr4:44856455-44856474 None:intergenic 25.0%
!! GAAATGGAAAATGAACATTT+TGG - Chr4:44850466-44850485 MsG0480020620.01.T01:intron 25.0%
!! GATCTCAATAATTTTCTATC+TGG - Chr4:44854781-44854800 MsG0480020620.01.T01:intron 25.0%
!! GCTTTGATGACTTAAATTTA+TGG + Chr4:44848788-44848807 None:intergenic 25.0%
!! GTTATCTATTTTATGTTCTG+GGG - Chr4:44849594-44849613 MsG0480020620.01.T01:intron 25.0%
!! TACAAAATGATGGAAAATAG+AGG + Chr4:44853998-44854017 None:intergenic 25.0%
!! TACTCTTCTTTTCTTTAAAC+CGG + Chr4:44847973-44847992 None:intergenic 25.0%
!! TATAACACTCTTTTGTTGAT+AGG + Chr4:44846281-44846300 None:intergenic 25.0%
!! TGATATTTTCTTCCATTCTA+CGG - Chr4:44851773-44851792 MsG0480020620.01.T01:intron 25.0%
!! TTATCTATTTTATGTTCTGG+GGG - Chr4:44849595-44849614 MsG0480020620.01.T01:intron 25.0%
!! TTTGTGAAGTCATATTTTCT+AGG + Chr4:44854987-44855006 None:intergenic 25.0%
!!! AAAATTTGTTGTTTTCTGGT+TGG + Chr4:44851950-44851969 None:intergenic 25.0%
!!! AAGGTTTTTGATTTCTTCTT+TGG + Chr4:44854335-44854354 None:intergenic 25.0%
!!! AATATTTTGGTATGATGTTG+TGG - Chr4:44848119-44848138 MsG0480020620.01.T01:intron 25.0%
!!! AATCATGGTTGATTTTTCAA+AGG - Chr4:44853558-44853577 MsG0480020620.01.T01:intron 25.0%
!!! ATATTTTGGTATGATGTTGT+GGG - Chr4:44848120-44848139 MsG0480020620.01.T01:intron 25.0%
!!! ATCATGGTTGATTTTTCAAA+GGG - Chr4:44853559-44853578 MsG0480020620.01.T01:intron 25.0%
!!! ATGTTGGTGATTTTTTATGA+AGG - Chr4:44853732-44853751 MsG0480020620.01.T01:intron 25.0%
!!! CCTATTGATAATGTGATTTT+AGG - Chr4:44853184-44853203 MsG0480020620.01.T01:intron 25.0%
!!! CGATTGATAATGTGATTTAA+GGG - Chr4:44845803-44845822 MsG0480020620.01.T01:intron 25.0%
!!! CTTTTTCATGGATTCTAAAT+GGG - Chr4:44853421-44853440 MsG0480020620.01.T01:intron 25.0%
!!! TAAGTTCCAATGACATTTTT+TGG + Chr4:44845981-44846000 None:intergenic 25.0%
!!! TCTATATTAAAGCTTGTTGT+GGG - Chr4:44850676-44850695 MsG0480020620.01.T01:intron 25.0%
!!! TGTGACTGTTTATTTCTTTT+AGG - Chr4:44849796-44849815 MsG0480020620.01.T01:intron 25.0%
!!! TGTTGGTGATTTTTTATGAA+GGG - Chr4:44853733-44853752 MsG0480020620.01.T01:intron 25.0%
!!! TGTTTATGATTTGTTACTTC+TGG - Chr4:44846084-44846103 MsG0480020620.01.T01:intron 25.0%
!!! TGTTTTTTCTTGATAGAGTA+AGG - Chr4:44849488-44849507 MsG0480020620.01.T01:intron 25.0%
!!! TTCTATATTAAAGCTTGTTG+TGG - Chr4:44850675-44850694 MsG0480020620.01.T01:intron 25.0%
!!! TTTTAGGAATAAACAGAGAA+AGG - Chr4:44857856-44857875 MsG0480020620.01.T01:five_prime_UTR 25.0%
!!! TTTTTTTCAGTTTTGGTGTT+TGG - Chr4:44849231-44849250 MsG0480020620.01.T01:intron 25.0%
AAAAAAAAAACAGACATGCC+TGG + Chr4:44857114-44857133 None:intergenic 30.0%
AAAAAAAAACAGACATGCCT+GGG + Chr4:44857113-44857132 None:intergenic 30.0%
AAAAAGTTCTGTCAGGTTTA+TGG + Chr4:44849373-44849392 None:intergenic 30.0%
AAAAGTCGAAGGAAATCTTT+AGG - Chr4:44851382-44851401 MsG0480020620.01.T01:intron 30.0%
AAACAACATACACACACATA+GGG + Chr4:44848886-44848905 None:intergenic 30.0%
AAATACACGTAGAATCAGAA+TGG - Chr4:44849959-44849978 MsG0480020620.01.T01:intron 30.0%
AAATATCTGAGAATTGCAGT+TGG - Chr4:44855297-44855316 MsG0480020620.01.T01:intron 30.0%
AAATGTGAAAACCTTGAACT+TGG - Chr4:44853473-44853492 MsG0480020620.01.T01:intron 30.0%
AAATTCAAATGTAACGAGAC+TGG + Chr4:44847859-44847878 None:intergenic 30.0%
AACTTAGGAAGGTTATTCAT+AGG - Chr4:44857788-44857807 MsG0480020620.01.T01:intron 30.0%
AAGACTAAGCAAAAGATACA+TGG - Chr4:44847546-44847565 MsG0480020620.01.T01:intron 30.0%
AAGTCTGGCAATACAATATT+TGG + Chr4:44857036-44857055 None:intergenic 30.0%
AAGTGAAAAGAGATGTTGAT+GGG + Chr4:44846928-44846947 None:intergenic 30.0%
AATGTCTATCACTCAAAAGA+TGG + Chr4:44853636-44853655 None:intergenic 30.0%
ACATTTGTAAAAACATTGCC+GGG - Chr4:44853935-44853954 MsG0480020620.01.T01:intron 30.0%
ACTAATTGTGGTTGTTTAGT+GGG - Chr4:44857712-44857731 MsG0480020620.01.T01:intron 30.0%
ACTCTATCAAGAAAAAACAG+AGG + Chr4:44849487-44849506 None:intergenic 30.0%
ACTTTCGAATGTCAAAACAT+TGG - Chr4:44855085-44855104 MsG0480020620.01.T01:CDS 30.0%
AGAAATGAAAAAGTTCTGTC+AGG + Chr4:44849380-44849399 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG + Chr4:44846790-44846809 None:intergenic 30.0%
AGGAGTAATTTGATATTGAC+AGG - Chr4:44849816-44849835 MsG0480020620.01.T01:intron 30.0%
AGGTATTCTATGTTTGATGA+CGG - Chr4:44854748-44854767 MsG0480020620.01.T01:intron 30.0%
AGTAGAAAAAAGTTTACGCA+TGG - Chr4:44855916-44855935 MsG0480020620.01.T01:CDS 30.0%
ATACTATTACATTCGTGGTT+GGG - Chr4:44848228-44848247 MsG0480020620.01.T01:intron 30.0%
ATATGAAGAACTTCAAGTGA+CGG + Chr4:44854945-44854964 None:intergenic 30.0%
ATCATGTCATAACTATACTC+AGG - Chr4:44854104-44854123 MsG0480020620.01.T01:intron 30.0%
ATGTCTATCACTCAAAAGAT+GGG + Chr4:44853635-44853654 None:intergenic 30.0%
ATGTGTTCTATCCAAAAGAT+GGG - Chr4:44846305-44846324 MsG0480020620.01.T01:intron 30.0%
ATTCTGATTCTACGTGTATT+TGG + Chr4:44849960-44849979 None:intergenic 30.0%
ATTTATTGTGGCAACTATGT+TGG - Chr4:44849054-44849073 MsG0480020620.01.T01:intron 30.0%
ATTTCTTCTTTCGATATCAC+AGG + Chr4:44846387-44846406 None:intergenic 30.0%
CAAAACCAAAACAACCTTAA+TGG + Chr4:44853678-44853697 None:intergenic 30.0%
CAGAGAAAAAGAACAATACA+CGG + Chr4:44845675-44845694 None:intergenic 30.0%
CATAAACATGATTTCGACAA+GGG + Chr4:44846072-44846091 None:intergenic 30.0%
CCAATCATGGTATAATAGTA+AGG + Chr4:44850838-44850857 None:intergenic 30.0%
CCACAATTAGTCAAAACATA+TGG + Chr4:44857703-44857722 None:intergenic 30.0%
CCTTACTATTATACCATGAT+TGG - Chr4:44850835-44850854 MsG0480020620.01.T01:intron 30.0%
CGAATCAAAAGCAATTTCTT+AGG - Chr4:44845171-44845190 MsG0480020620.01.T01:intron 30.0%
CGGTAAATATACATGAAAAG+AGG + Chr4:44846770-44846789 None:intergenic 30.0%
CGTTAAATTCACAGACTAAT+TGG - Chr4:44852253-44852272 MsG0480020620.01.T01:intron 30.0%
CTACCTGAACAAAAAAACTT+TGG - Chr4:44850771-44850790 MsG0480020620.01.T01:intron 30.0%
GAAATAGATTGAGCATTTAC+AGG + Chr4:44856702-44856721 None:intergenic 30.0%
GAACAAGATTGAACATTTAC+AGG + Chr4:44848686-44848705 None:intergenic 30.0%
GAACATGAGATAAGTAATGA+AGG + Chr4:44851913-44851932 None:intergenic 30.0%
GAAGTAGGCATATAAAACAA+AGG + Chr4:44854891-44854910 None:intergenic 30.0%
GAATTTGAAGAAACTCTATG+AGG + Chr4:44852943-44852962 None:intergenic 30.0%
GAGATATAAAGTTGTGTTGA+CGG + Chr4:44848196-44848215 None:intergenic 30.0%
GATTATCAATACTAGAAGTC+AGG - Chr4:44857242-44857261 MsG0480020620.01.T01:intron 30.0%
GCAAAAAACAACACAATATG+TGG + Chr4:44849180-44849199 None:intergenic 30.0%
GGGACAAATAAAAAAAAAGG+AGG - Chr4:44850696-44850715 MsG0480020620.01.T01:intron 30.0%
GTAGAAAAAAGTTTACGCAT+GGG - Chr4:44855917-44855936 MsG0480020620.01.T01:CDS 30.0%
GTCTTCTATAAGATCTTTGA+TGG - Chr4:44850372-44850391 MsG0480020620.01.T01:intron 30.0%
GTTATTGTGGATTTAGCAAT+TGG + Chr4:44850148-44850167 None:intergenic 30.0%
GTTTGAAGAAACTCAATCAT+AGG - Chr4:44853521-44853540 MsG0480020620.01.T01:intron 30.0%
TAAAAGAAGGTTAAATTGGG+AGG + Chr4:44855570-44855589 None:intergenic 30.0%
TAAACAACATACACACACAT+AGG + Chr4:44848887-44848906 None:intergenic 30.0%
TAAGTGAAAAGAGATGTTGA+TGG + Chr4:44846929-44846948 None:intergenic 30.0%
TAATAAACAAAACATGCCTG+GGG + Chr4:44849124-44849143 None:intergenic 30.0%
TAATGTACTAAACATGACTG+CGG - Chr4:44851278-44851297 MsG0480020620.01.T01:intron 30.0%
TAGAAAAAAGTTTACGCATG+GGG - Chr4:44855918-44855937 MsG0480020620.01.T01:CDS 30.0%
TAGAATACATCACAGTTTCA+TGG + Chr4:44846813-44846832 None:intergenic 30.0%
TAGGAATAGGTACAAAATGA+TGG + Chr4:44854008-44854027 None:intergenic 30.0%
TAGTCAAAACATATGGTCAA+GGG + Chr4:44857696-44857715 None:intergenic 30.0%
TATACTATTACATTCGTGGT+TGG - Chr4:44848227-44848246 MsG0480020620.01.T01:intron 30.0%
TATAGACATGATTTCGACAA+GGG + Chr4:44853883-44853902 None:intergenic 30.0%
TATCTTAAAGCTTGCAACAA+AGG - Chr4:44850739-44850758 MsG0480020620.01.T01:intron 30.0%
TCATAAACATGATTTCGACA+AGG + Chr4:44846073-44846092 None:intergenic 30.0%
TCTCTTCAATAAGTGAAAAG+AGG + Chr4:44846938-44846957 None:intergenic 30.0%
TCTTTCAGAACAAAAAACAG+CGG + Chr4:44857334-44857353 None:intergenic 30.0%
TGAAAAACAAAGAAGAACAG+AGG + Chr4:44853127-44853146 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG + Chr4:44854682-44854701 None:intergenic 30.0%
TGACAAGCTTGAAATTAATG+AGG + Chr4:44850122-44850141 None:intergenic 30.0%
TGGAATATAACACTCCATTA+TGG + Chr4:44848838-44848857 None:intergenic 30.0%
TGGGTAACACAACTTTAATT+TGG + Chr4:44857762-44857781 None:intergenic 30.0%
TGTGATGTATTCTATCTTTG+AGG - Chr4:44846819-44846838 MsG0480020620.01.T01:intron 30.0%
TTAAACCTATATCATTTCCG+AGG - Chr4:44851472-44851491 MsG0480020620.01.T01:intron 30.0%
TTAGAATCCATGAAAAAGCT+TGG + Chr4:44853419-44853438 None:intergenic 30.0%
TTAGGGTTCAAAATCAATCT+CGG - Chr4:44852808-44852827 MsG0480020620.01.T01:intron 30.0%
TTAGTCAAAACATATGGTCA+AGG + Chr4:44857697-44857716 None:intergenic 30.0%
TTATAGACATGATTTCGACA+AGG + Chr4:44853884-44853903 None:intergenic 30.0%
TTCCAGAAGTAACAAATCTT+AGG + Chr4:44854027-44854046 None:intergenic 30.0%
TTGAATATGGGAGACTAAAT+TGG + Chr4:44855173-44855192 None:intergenic 30.0%
TTTCTTCTTTCGATATCACA+GGG + Chr4:44846386-44846405 None:intergenic 30.0%
TTTGAGAAACTAAAAGTCGA+AGG - Chr4:44851371-44851390 MsG0480020620.01.T01:intron 30.0%
TTTGATGAGCATATCCATAA+TGG - Chr4:44848821-44848840 MsG0480020620.01.T01:CDS 30.0%
! AAAAAATCTTATTGCCGCTT+AGG - Chr4:44854605-44854624 MsG0480020620.01.T01:intron 30.0%
! AATGTCTAGAACAATAAGAG+AGG + Chr4:44848165-44848184 None:intergenic 30.0%
! AATTTGTATACACTCTGGAA+AGG - Chr4:44847141-44847160 MsG0480020620.01.T01:intron 30.0%
! ACATTTTATCAGCTGAAACT+TGG + Chr4:44853785-44853804 None:intergenic 30.0%
! ACTCTTCTTTTCTTTAAACC+GGG + Chr4:44847972-44847991 None:intergenic 30.0%
! ATATTGATACAGCTCTGTTT+TGG - Chr4:44848746-44848765 MsG0480020620.01.T01:CDS 30.0%
! ATTAAGAGTACATGATTTGC+AGG + Chr4:44849759-44849778 None:intergenic 30.0%
! CATTAGTTTGGCTATATTCT+CGG + Chr4:44854374-44854393 None:intergenic 30.0%
! GAATTTGAAGAAAGTGTATG+AGG + Chr4:44845349-44845368 None:intergenic 30.0%
! GATCTCAATACTTTTCTATC+TGG - Chr4:44846856-44846875 MsG0480020620.01.T01:intron 30.0%
! GCAGTGATTTTTATCTCTTT+TGG - Chr4:44853350-44853369 MsG0480020620.01.T01:intron 30.0%
! GGGTAACACAACTTTAATTT+GGG + Chr4:44857761-44857780 None:intergenic 30.0%
! TATTGATACAGCTCTGTTTT+GGG - Chr4:44848747-44848766 MsG0480020620.01.T01:CDS 30.0%
! TATTGCAATGTGAAGTTGAT+TGG - Chr4:44856873-44856892 MsG0480020620.01.T01:intron 30.0%
! TTATCGTTAGATTTTCCAAC+TGG + Chr4:44855659-44855678 None:intergenic 30.0%
!! AAGTTTCCATTGCTTTTGAT+TGG + Chr4:44853594-44853613 None:intergenic 30.0%
!! AATGTCAAAACATTGGTTCT+CGG - Chr4:44855092-44855111 MsG0480020620.01.T01:CDS 30.0%
!! CCGATTGATAATGTGATTTA+AGG - Chr4:44845802-44845821 MsG0480020620.01.T01:intron 30.0%
!! GGTAACACAACTTTAATTTG+GGG + Chr4:44857760-44857779 None:intergenic 30.0%
!! TATCTATTTTATGTTCTGGG+GGG - Chr4:44849596-44849615 MsG0480020620.01.T01:intron 30.0%
!! TTCCTAAGATTTGTTACTTC+TGG - Chr4:44854022-44854041 MsG0480020620.01.T01:intron 30.0%
!!! CAAAGTTTTTTTGTTCAGGT+AGG + Chr4:44850773-44850792 None:intergenic 30.0%
!!! CAACCAAAGTTTTTTTGTTC+AGG + Chr4:44850777-44850796 None:intergenic 30.0%
!!! CATTAAGGTTGTTTTGGTTT+TGG - Chr4:44853676-44853695 MsG0480020620.01.T01:intron 30.0%
!!! CCATATGTTTTGACTAATTG+TGG - Chr4:44857700-44857719 MsG0480020620.01.T01:intron 30.0%
!!! GAAAAATCCAAGCTTTTTCA+TGG - Chr4:44853409-44853428 MsG0480020620.01.T01:intron 30.0%
!!! GCTTTTTCATGGATTCTAAA+TGG - Chr4:44853420-44853439 MsG0480020620.01.T01:intron 30.0%
!!! GGTAACATTTTTCAGGAATT+GGG - Chr4:44853289-44853308 MsG0480020620.01.T01:intron 30.0%
!!! GTTTTTTACTGTTATCCAAC+AGG - Chr4:44848620-44848639 MsG0480020620.01.T01:CDS 30.0%
!!! TATTTTGGTATGATGTTGTG+GGG - Chr4:44848121-44848140 MsG0480020620.01.T01:intron 30.0%
!!! TTTTATCTCTTTTGGGACAA+TGG - Chr4:44853358-44853377 MsG0480020620.01.T01:intron 30.0%
!!! TTTTGTTCAGTTTTGGAGTT+TGG - Chr4:44857132-44857151 MsG0480020620.01.T01:intron 30.0%
AAAAAAAACAGACATGCCTG+GGG + Chr4:44857112-44857131 None:intergenic 35.0%
AAAAGAAGTTCCTCCAAATG+TGG + Chr4:44854811-44854830 None:intergenic 35.0%
AAAATCCGGAAGCTTACAAA+TGG + Chr4:44847118-44847137 None:intergenic 35.0%
AACAACATACACACACATAG+GGG + Chr4:44848885-44848904 None:intergenic 35.0%
AACAGTCCAATCAAAAGCAA+TGG - Chr4:44853585-44853604 MsG0480020620.01.T01:intron 35.0%
AACTGTTGAGTTCAGAGTAA+CGG + Chr4:44853078-44853097 None:intergenic 35.0%
AAGAAGACAGAACACCATTA+AGG - Chr4:44853661-44853680 MsG0480020620.01.T01:intron 35.0%
AATAAACAGACACGCACATA+GGG + Chr4:44856907-44856926 None:intergenic 35.0%
AATCAGCCTTCATTGAACAT+GGG + Chr4:44849205-44849224 None:intergenic 35.0%
AATGGATCACCAATATAGGA+CGG + Chr4:44852437-44852456 None:intergenic 35.0%
AATGTTGTTAGATTCCTCGA+TGG + Chr4:44852554-44852573 None:intergenic 35.0%
AATTCCAATCAACTTCGCAT+TGG + Chr4:44848858-44848877 None:intergenic 35.0%
ACACACGTAAAAGAGTCAAA+TGG + Chr4:44852455-44852474 None:intergenic 35.0%
ACTCAACAGTTGAGTTCATA+AGG - Chr4:44853087-44853106 MsG0480020620.01.T01:intron 35.0%
ACTCAAGGATCTTGCAATTA+TGG - Chr4:44855355-44855374 MsG0480020620.01.T01:intron 35.0%
ACTTAAAACAGGTCCAAAAG+TGG - Chr4:44851337-44851356 MsG0480020620.01.T01:intron 35.0%
ACTTAAGGATCTTGCAGTTA+AGG - Chr4:44847436-44847455 MsG0480020620.01.T01:intron 35.0%
AGAAATCCTCCTTACTAGTA+TGG - Chr4:44855945-44855964 MsG0480020620.01.T01:CDS 35.0%
AGCATGTGTATGAACATGTA+TGG + Chr4:44850494-44850513 None:intergenic 35.0%
AGTACAAGTTAACCAGATTG+TGG - Chr4:44848562-44848581 MsG0480020620.01.T01:CDS 35.0%
AGTAGAAAAAAGTTTGCGCA+AGG - Chr4:44847989-44848008 MsG0480020620.01.T01:CDS 35.0%
ATAAGCGACAATCTGAATCA+AGG - Chr4:44857531-44857550 MsG0480020620.01.T01:intron 35.0%
ATAAGTAGATTAAGAGGGTG+GGG + Chr4:44856449-44856468 None:intergenic 35.0%
ATAGAAAGAACTTCGAGTGA+CGG + Chr4:44847024-44847043 None:intergenic 35.0%
ATATAATAGGCTCGAAAGTC+TGG - Chr4:44855433-44855452 MsG0480020620.01.T01:intron 35.0%
ATATAGTCAGACATGTTGAC+TGG - Chr4:44848950-44848969 MsG0480020620.01.T01:intron 35.0%
ATATCAGCATTACCACAATC+TGG + Chr4:44848577-44848596 None:intergenic 35.0%
ATCATGTTAATCCTGCATCA+CGG + Chr4:44851757-44851776 None:intergenic 35.0%
ATGAGAATAGAATTGCATGC+TGG + Chr4:44847266-44847285 None:intergenic 35.0%
ATGGAAGGATGGTTAAAAGA+GGG - Chr4:44852074-44852093 MsG0480020620.01.T01:intron 35.0%
ATTAGTGCCTGATAATCATG+AGG - Chr4:44849680-44849699 MsG0480020620.01.T01:intron 35.0%
ATTTCTTCTTTGGACATCAC+AGG + Chr4:44854325-44854344 None:intergenic 35.0%
CAACACGTAATAACAGAAGT+AGG + Chr4:44846982-44847001 None:intergenic 35.0%
CATATTTGCACCACTATTCT+TGG - Chr4:44845543-44845562 MsG0480020620.01.T01:intron 35.0%
CATGATTATCAGGCACTAAT+AGG + Chr4:44849680-44849699 None:intergenic 35.0%
CATGTGTTCTATCCAAAAGA+TGG - Chr4:44846304-44846323 MsG0480020620.01.T01:intron 35.0%
CCTAAAAAAAACCTTACCGT+GGG + Chr4:44857843-44857862 None:intergenic 35.0%
CTATCAGTATTACCACAATC+TGG + Chr4:44856593-44856612 None:intergenic 35.0%
CTTGCAAACTCATACTTTCT+AGG + Chr4:44847066-44847085 None:intergenic 35.0%
GAAATCCTCCTTACTAGTAT+GGG - Chr4:44855946-44855965 MsG0480020620.01.T01:CDS 35.0%
GACTAATTGTGGTTGTTTAG+TGG - Chr4:44857711-44857730 MsG0480020620.01.T01:intron 35.0%
GATAAGTAGATTAAGAGGGT+GGG + Chr4:44856450-44856469 None:intergenic 35.0%
GATATGTGACCGTAAATGAA+TGG + Chr4:44851629-44851648 None:intergenic 35.0%
GCATGTGTATGAACATGTAT+GGG + Chr4:44850493-44850512 None:intergenic 35.0%
GGAGACGAATTGTAAATTCA+AGG - Chr4:44852292-44852311 MsG0480020620.01.T01:intron 35.0%
GGTAATTGAAAGTGAAGGTT+GGG + Chr4:44846351-44846370 None:intergenic 35.0%
GGTATCTTAATATTGTTGGC+AGG - Chr4:44856041-44856060 MsG0480020620.01.T01:CDS 35.0%
GTAAAAAGGAAATTCTCCCA+TGG + Chr4:44850335-44850354 None:intergenic 35.0%
GTAGAAAAAAGTTTGCGCAA+GGG - Chr4:44847990-44848009 MsG0480020620.01.T01:CDS 35.0%
GTAGCAACAAGTCAGTAAAA+AGG + Chr4:44850349-44850368 None:intergenic 35.0%
GTCAAATGGATCACCAATAT+AGG + Chr4:44852441-44852460 None:intergenic 35.0%
GTGAAAAAGAGACCTTAACA+AGG + Chr4:44853818-44853837 None:intergenic 35.0%
GTGAAGCTCTCAAATAATTC+TGG + Chr4:44850291-44850310 None:intergenic 35.0%
GTTCATACACATGCTACAAA+TGG - Chr4:44850499-44850518 MsG0480020620.01.T01:intron 35.0%
TAATCAGCCTTCATTGAACA+TGG + Chr4:44849206-44849225 None:intergenic 35.0%
TAGAAAAAAGTTTGCGCAAG+GGG - Chr4:44847991-44848010 MsG0480020620.01.T01:CDS 35.0%
TAGAATACCTCACAGTTTCA+CGG + Chr4:44854738-44854757 None:intergenic 35.0%
TAGCAGTAGTGAAAAGTGAA+GGG + Chr4:44845755-44845774 None:intergenic 35.0%
TATGAAGAACTTCAAGTGAC+GGG + Chr4:44854944-44854963 None:intergenic 35.0%
TATTGCCACTATCTGATAGA+GGG - Chr4:44857196-44857215 MsG0480020620.01.T01:intron 35.0%
TATTTGCATTTGTAAGCGTC+TGG - Chr4:44855031-44855050 MsG0480020620.01.T01:CDS 35.0%
TCAAATCAATTCCCGAAGAA+AGG - Chr4:44847779-44847798 MsG0480020620.01.T01:intron 35.0%
TCAAGACATAGAAACTGAGT+TGG - Chr4:44847887-44847906 MsG0480020620.01.T01:intron 35.0%
TCACTCAAGTAAGTTAGAGA+AGG - Chr4:44847932-44847951 MsG0480020620.01.T01:intron 35.0%
TCATTATGGGACATTCTGAT+TGG - Chr4:44857890-44857909 MsG0480020620.01.T01:intron 35.0%
TCATTCATTCCATGAGAGTA+AGG - Chr4:44857405-44857424 MsG0480020620.01.T01:intron 35.0%
TCCAAAAGTTCACATAGTTC+AGG - Chr4:44849418-44849437 MsG0480020620.01.T01:intron 35.0%
TCCTAAAAAAAACCTTACCG+TGG + Chr4:44857844-44857863 None:intergenic 35.0%
TCTCAACTCACGAATTCAAA+AGG - Chr4:44845635-44845654 MsG0480020620.01.T01:intron 35.0%
TCTCTGGTAATTGAAAGTGA+AGG + Chr4:44846356-44846375 None:intergenic 35.0%
TGAAAAGAGGAATTGAGTGT+TGG + Chr4:44846757-44846776 None:intergenic 35.0%
TGAAATCAACTCCCAAAGAA+AGG - Chr4:44855707-44855726 MsG0480020620.01.T01:CDS 35.0%
TGACACATCAACTTCACTAA+CGG - Chr4:44852195-44852214 MsG0480020620.01.T01:intron 35.0%
TGAGAATAGAATTGCATGCT+GGG + Chr4:44847265-44847284 None:intergenic 35.0%
TGATAAGTAGATTAAGAGGG+TGG + Chr4:44856451-44856470 None:intergenic 35.0%
TGCGATCAAATTACCAATCA+TGG + Chr4:44850851-44850870 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG + Chr4:44846352-44846371 None:intergenic 35.0%
TGTAAACTTCATACCCATAC+TGG + Chr4:44848035-44848054 None:intergenic 35.0%
TGTAAGTCACTCAAGTAAGT+TGG - Chr4:44847926-44847945 MsG0480020620.01.T01:intron 35.0%
TGTATATAGTAGCAATGACC+CGG + Chr4:44853956-44853975 None:intergenic 35.0%
TGTCTATCACTCAAAAGATG+GGG + Chr4:44853634-44853653 None:intergenic 35.0%
TGTTACCCAGATATCAACTT+AGG - Chr4:44857773-44857792 MsG0480020620.01.T01:intron 35.0%
TTACAGGCAAGTCTAATGTA+GGG + Chr4:44856686-44856705 None:intergenic 35.0%
TTACTTTCTCCGTCCTATAT+TGG - Chr4:44852425-44852444 MsG0480020620.01.T01:intron 35.0%
TTAGAAGCAATAGTTCCTGT+TGG + Chr4:44848638-44848657 None:intergenic 35.0%
TTAGATGGATGCTTTCTGAA+GGG + Chr4:44851730-44851749 None:intergenic 35.0%
TTAGTGCCTGATAATCATGA+GGG - Chr4:44849681-44849700 MsG0480020620.01.T01:intron 35.0%
TTCTATATGATCGAGAAGCT+TGG - Chr4:44849283-44849302 MsG0480020620.01.T01:intron 35.0%
TTTACAGGCAAGTCTAATGT+AGG + Chr4:44856687-44856706 None:intergenic 35.0%
TTTAGATGGATGCTTTCTGA+AGG + Chr4:44851731-44851750 None:intergenic 35.0%
TTTCATGCAGAAACAAATCC+AGG + Chr4:44846664-44846683 None:intergenic 35.0%
TTTCTCTCATACCAAGTTCA+AGG + Chr4:44853487-44853506 None:intergenic 35.0%
TTTCTTCTTTGGACATCACA+GGG + Chr4:44854324-44854343 None:intergenic 35.0%
! AAAGATAAAGCTGTGTTGGT+CGG + Chr4:44856123-44856142 None:intergenic 35.0%
! AAATGCCTTTGAAAACCACA+TGG + Chr4:44846510-44846529 None:intergenic 35.0%
! AAGCTTCGGTAACATTTTTC+AGG - Chr4:44853282-44853301 MsG0480020620.01.T01:intron 35.0%
! AAGTTATTTCAAATGGGGGA+GGG - Chr4:44852651-44852670 MsG0480020620.01.T01:intron 35.0%
! AATGCCTTTGAAAACCACAT+GGG + Chr4:44846509-44846528 None:intergenic 35.0%
! AATGGAGGTAATTTGAGGTT+TGG + Chr4:44849562-44849581 None:intergenic 35.0%
! AATTCGTGAGTTGAGAGTAA+CGG + Chr4:44845631-44845650 None:intergenic 35.0%
! ACTCTTCTTTTCTTTGCAGT+AGG + Chr4:44855899-44855918 None:intergenic 35.0%
! ACTGCAAGATCCTTAAGTTT+TGG + Chr4:44847434-44847453 None:intergenic 35.0%
! ATGAAAGCACACAATAAGTC+TGG + Chr4:44857051-44857070 None:intergenic 35.0%
! ATTGCAAGATCCTTGAGTTT+TGG + Chr4:44855353-44855372 None:intergenic 35.0%
! CTAAACATGTAGTTGCTGTT+AGG - Chr4:44850891-44850910 MsG0480020620.01.T01:intron 35.0%
! CTTGCAGCTTAATTGATTCA+AGG + Chr4:44849081-44849100 None:intergenic 35.0%
! GAACACCATTAAGGTTGTTT+TGG - Chr4:44853670-44853689 MsG0480020620.01.T01:intron 35.0%
! GTTTTCCTCGGAAATGATAT+AGG + Chr4:44851480-44851499 None:intergenic 35.0%
! TAAGTTATTTCAAATGGGGG+AGG - Chr4:44852650-44852669 MsG0480020620.01.T01:intron 35.0%
! TATAAAGTTGTGTTGACGGT+CGG + Chr4:44848192-44848211 None:intergenic 35.0%
! TATGTCTAGAACAGTAAGAG+AGG + Chr4:44856096-44856115 None:intergenic 35.0%
! TATTCCAATGCGAAGTTGAT+TGG - Chr4:44848851-44848870 MsG0480020620.01.T01:CDS 35.0%
! TCTTCCATTCTACGGATTTT+GGG - Chr4:44851781-44851800 MsG0480020620.01.T01:intron 35.0%
! TGAGGTTTTTCCAACAATGT+TGG - Chr4:44853716-44853735 MsG0480020620.01.T01:intron 35.0%
! TTCTTCCATTCTACGGATTT+TGG - Chr4:44851780-44851799 MsG0480020620.01.T01:intron 35.0%
!! AAATTTTGCATCGCCACTTT+TGG + Chr4:44851353-44851372 None:intergenic 35.0%
!! AACCTTCCTAAGTTGATATC+TGG + Chr4:44857782-44857801 None:intergenic 35.0%
!! AAGTGAAAAGAGGTGTTGAT+GGG + Chr4:44854853-44854872 None:intergenic 35.0%
!! AATGTCAAATCATTGGCTCT+CGG - Chr4:44847171-44847190 MsG0480020620.01.T01:intron 35.0%
!! ACCTTCCTAAGTTGATATCT+GGG + Chr4:44857781-44857800 None:intergenic 35.0%
!! ACTAGATTAAAAGTGTCGAG+TGG + Chr4:44848428-44848447 None:intergenic 35.0%
!! CTAACGTTTGATAGTGAGAA+AGG - Chr4:44846455-44846474 MsG0480020620.01.T01:intron 35.0%
!! GAAGATGGTGAAGTTTTAGT+GGG - Chr4:44852003-44852022 MsG0480020620.01.T01:intron 35.0%
!! GCTCTCTGATTTTTAGATTG+TGG + Chr4:44849337-44849356 None:intergenic 35.0%
!! TAAGTGAAAAGAGGTGTTGA+TGG + Chr4:44854854-44854873 None:intergenic 35.0%
!! TGAAGATGGTGAAGTTTTAG+TGG - Chr4:44852002-44852021 MsG0480020620.01.T01:intron 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG + Chr4:44846547-44846566 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG - Chr4:44846625-44846644 MsG0480020620.01.T01:intron 35.0%
!!! ACATTTTTCAGGAATTGGGT+TGG - Chr4:44853293-44853312 MsG0480020620.01.T01:intron 35.0%
!!! AGGAATTGGGTTGGTTTTAT+AGG - Chr4:44853302-44853321 MsG0480020620.01.T01:intron 35.0%
!!! ATTTTAGGGTTTCTGTTAGC+TGG - Chr4:44853199-44853218 MsG0480020620.01.T01:intron 35.0%
!!! CGGTAACATTTTTCAGGAAT+TGG - Chr4:44853288-44853307 MsG0480020620.01.T01:intron 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG + Chr4:44854603-44854622 None:intergenic 35.0%
!!! GGAATTGGGTTGGTTTTATA+GGG - Chr4:44853303-44853322 MsG0480020620.01.T01:intron 35.0%
!!! TGTTTTGGTTTTGGTCTTGT+TGG - Chr4:44853685-44853704 MsG0480020620.01.T01:intron 35.0%
AAAGTGAAGGTTGGGAATCT+TGG + Chr4:44846343-44846362 None:intergenic 40.0%
AACAAAGAAGAACAGAGGTG+AGG + Chr4:44853122-44853141 None:intergenic 40.0%
AACAGTCACAATCTCAAAGC+AGG + Chr4:44849786-44849805 None:intergenic 40.0%
AACTTCACTAACGGAGAGAT+TGG - Chr4:44852204-44852223 MsG0480020620.01.T01:intron 40.0%
AAGACTTGGCGAAAGATACA+TGG - Chr4:44855469-44855488 MsG0480020620.01.T01:intron 40.0%
AAGAGTAAGACCAAACCTCA+CGG - Chr4:44857350-44857369 MsG0480020620.01.T01:intron 40.0%
AATAGCAGCTTCATCAAGAG+TGG + Chr4:44855015-44855034 None:intergenic 40.0%
AATCAACTCCCAAAGAAAGG+AGG - Chr4:44855710-44855729 MsG0480020620.01.T01:CDS 40.0%
AATCAATTCCCGAAGAAAGG+AGG - Chr4:44847782-44847801 MsG0480020620.01.T01:intron 40.0%
ACACGTAGAATCAGAATGGT+CGG - Chr4:44849963-44849982 MsG0480020620.01.T01:intron 40.0%
ACAGAATGCTCCAAAACTCA+AGG - Chr4:44855340-44855359 MsG0480020620.01.T01:intron 40.0%
ACATGTGTACATTATGTGGC+TGG + Chr4:44854417-44854436 None:intergenic 40.0%
ACCCACATGTGTACATTATG+TGG + Chr4:44854421-44854440 None:intergenic 40.0%
ACCCAGATATCAACTTAGGA+AGG - Chr4:44857777-44857796 MsG0480020620.01.T01:intron 40.0%
ACCTTCATCAAAAGCCCATT+GGG - Chr4:44851672-44851691 MsG0480020620.01.T01:intron 40.0%
ACGCTAAGAACGAATGAAGT+AGG + Chr4:44845201-44845220 None:intergenic 40.0%
ACTAATGCAAGAGAGACAGA+TGG - Chr4:44854387-44854406 MsG0480020620.01.T01:intron 40.0%
ACTTCATACCCATACTGGTA+CGG + Chr4:44848030-44848049 None:intergenic 40.0%
ACTTCGTACCCATACTAGTA+AGG + Chr4:44855957-44855976 None:intergenic 40.0%
AGCCACATAATGTACACATG+TGG - Chr4:44854416-44854435 MsG0480020620.01.T01:intron 40.0%
AGTACAAGTCAACCAGATTG+TGG - Chr4:44856578-44856597 MsG0480020620.01.T01:five_prime_UTR 40.0%
AGTCGAAGGAAATCTTTAGG+AGG - Chr4:44851385-44851404 MsG0480020620.01.T01:intron 40.0%
AGTTGCTAAGGTAGTAGTGA+AGG + Chr4:44850250-44850269 None:intergenic 40.0%
AGTTTCCAACCTCCTTTCTT+CGG + Chr4:44847794-44847813 None:intergenic 40.0%
AGTTTCCAACCTCCTTTCTT+TGG + Chr4:44847794-44847813 None:intergenic 40.0%
ATATAGTCAGACACGTTGAC+TGG - Chr4:44856974-44856993 MsG0480020620.01.T01:intron 40.0%
ATATTGTTGGCAGGATGTTG+TGG - Chr4:44856050-44856069 MsG0480020620.01.T01:CDS 40.0%
ATGAAGAACTTCAAGTGACG+GGG + Chr4:44854943-44854962 None:intergenic 40.0%
ATGTGACCGTAAATGAATGG+CGG + Chr4:44851626-44851645 None:intergenic 40.0%
CACACACACAATTACATTCG+TGG - Chr4:44856197-44856216 MsG0480020620.01.T01:CDS 40.0%
CGAAAGCAAGCTGTAAAGAT+AGG + Chr4:44846410-44846429 None:intergenic 40.0%
CGAATGTAATTGTGTGTGTG+TGG + Chr4:44856197-44856216 None:intergenic 40.0%
CTAATGCAAGAGAGACAGAT+GGG - Chr4:44854388-44854407 MsG0480020620.01.T01:intron 40.0%
CTAGCAGTAGTGAAAAGTGA+AGG + Chr4:44845756-44845775 None:intergenic 40.0%
CTCAGACTTAGCAATCAGAA+TGG - Chr4:44849652-44849671 MsG0480020620.01.T01:intron 40.0%
CTGCATAAAACCAGTTGCTA+AGG + Chr4:44850262-44850281 None:intergenic 40.0%
CTGTCTCTCTTGCATTAGTT+TGG + Chr4:44854386-44854405 None:intergenic 40.0%
CTGTGTAACGCAACTTCTTA+GGG - Chr4:44852763-44852782 MsG0480020620.01.T01:intron 40.0%
CTTAGGCTTCATAGTGACAA+AGG - Chr4:44846572-44846591 MsG0480020620.01.T01:intron 40.0%
CTTGTCTTGAGGAAAACCAT+GGG - Chr4:44850316-44850335 MsG0480020620.01.T01:intron 40.0%
GAAAAATCTTATTGCCGCTC+CGG - Chr4:44846680-44846699 MsG0480020620.01.T01:intron 40.0%
GAAATATCGAGAGTTGCAGT+TGG - Chr4:44847378-44847397 MsG0480020620.01.T01:intron 40.0%
GAATAAACAGACACGCACAT+AGG + Chr4:44856908-44856927 None:intergenic 40.0%
GATACACTTCCTTACTCTCA+TGG + Chr4:44857417-44857436 None:intergenic 40.0%
GATGGAAGGATGGTTAAAAG+AGG - Chr4:44852073-44852092 MsG0480020620.01.T01:intron 40.0%
GCAGAATGCTCCAAAACTTA+AGG - Chr4:44847421-44847440 MsG0480020620.01.T01:intron 40.0%
GCCACATAATGTACACATGT+GGG - Chr4:44854417-44854436 MsG0480020620.01.T01:intron 40.0%
GCTAAGCTTGAACTACAACA+TGG - Chr4:44851562-44851581 MsG0480020620.01.T01:intron 40.0%
GCTTTCCATTTGTAAGCTTC+CGG - Chr4:44847110-44847129 MsG0480020620.01.T01:intron 40.0%
GGACAACACTTAACAGAAGT+AGG + Chr4:44854906-44854925 None:intergenic 40.0%
GTATTATGGAGGGCAATTGT+GGG + Chr4:44851707-44851726 None:intergenic 40.0%
GTATTGCCACTATCTGATAG+AGG - Chr4:44857195-44857214 MsG0480020620.01.T01:intron 40.0%
GTCTTAGTTGCTCAAGCTAT+TGG + Chr4:44850651-44850670 None:intergenic 40.0%
GTGGGATAATTGTTCCCAAT+GGG + Chr4:44851689-44851708 None:intergenic 40.0%
GTTCAAGCTTAGCGTTAGTT+TGG + Chr4:44851555-44851574 None:intergenic 40.0%
GTTGCTAAGGTAGTAGTGAA+GGG + Chr4:44850249-44850268 None:intergenic 40.0%
GTTTCCAACCTCCTTTCTTT+GGG + Chr4:44855721-44855740 None:intergenic 40.0%
GTTTGCTTCAGACCTTGTTA+AGG - Chr4:44853803-44853822 MsG0480020620.01.T01:intron 40.0%
TAAATCGAAACTGTCCTCGT+AGG - Chr4:44848655-44848674 MsG0480020620.01.T01:CDS 40.0%
TACACATGCTACAAATGGTC+AGG - Chr4:44850504-44850523 MsG0480020620.01.T01:intron 40.0%
TACCTTCATCAAAAGCCCAT+TGG - Chr4:44851671-44851690 MsG0480020620.01.T01:intron 40.0%
TAGAAAGAACTTCGAGTGAC+GGG + Chr4:44847023-44847042 None:intergenic 40.0%
TAGAGTCCGCCATTCATTTA+CGG - Chr4:44851617-44851636 MsG0480020620.01.T01:intron 40.0%
TAGTGCCTGATAATCATGAG+GGG - Chr4:44849682-44849701 MsG0480020620.01.T01:intron 40.0%
TATCAGCTGAAACTTGGCTT+AGG + Chr4:44853779-44853798 None:intergenic 40.0%
TATTGTTGGCAGGATGTTGT+GGG - Chr4:44856051-44856070 MsG0480020620.01.T01:CDS 40.0%
TCCATGAAACAAATGTCCCA+CGG - Chr4:44857824-44857843 MsG0480020620.01.T01:intron 40.0%
TCTATCTGGTTGTCCACATT+TGG - Chr4:44854795-44854814 MsG0480020620.01.T01:intron 40.0%
TCTGTGTAACGCAACTTCTT+AGG - Chr4:44852762-44852781 MsG0480020620.01.T01:intron 40.0%
TGTACACATGTGGGTTTCAA+AGG - Chr4:44854426-44854445 MsG0480020620.01.T01:intron 40.0%
TGTGGGATAATTGTTCCCAA+TGG + Chr4:44851690-44851709 None:intergenic 40.0%
TGTTATGCAGTTTCTCAGCA+AGG - Chr4:44847296-44847315 MsG0480020620.01.T01:CDS 40.0%
TGTTATGCAGTTTCTCAGCA+TGG - Chr4:44847296-44847315 MsG0480020620.01.T01:CDS 40.0%
TGTTCCCAAAATCCGTAGAA+TGG + Chr4:44851788-44851807 None:intergenic 40.0%
TTACACCCCTCATGATTATC+AGG + Chr4:44849690-44849709 None:intergenic 40.0%
TTCACTACTACCTTAGCAAC+TGG - Chr4:44850249-44850268 MsG0480020620.01.T01:intron 40.0%
TTGCATCCCATGTTCAATGA+AGG - Chr4:44849196-44849215 MsG0480020620.01.T01:intron 40.0%
! AAGGTAAAGATTTTCGCACC+CGG - Chr4:44847951-44847970 MsG0480020620.01.T01:CDS 40.0%
! AATGGAGGGTGCAATCTTAT+CGG + Chr4:44851502-44851521 None:intergenic 40.0%
! ACATTCTGATTGGTTATGGG+TGG - Chr4:44857900-44857919 MsG0480020620.01.T01:intron 40.0%
! ACTCGTGGTCTTAAAATTGC+GGG - Chr4:44846720-44846739 MsG0480020620.01.T01:intron 40.0%
! ATCATGAGGGGTGTAAAGAA+TGG - Chr4:44849694-44849713 MsG0480020620.01.T01:intron 40.0%
! CACTCGTGGTCTTAAAATTG+CGG - Chr4:44846719-44846738 MsG0480020620.01.T01:intron 40.0%
! CATTCTGATTGGTTATGGGT+GGG - Chr4:44857901-44857920 MsG0480020620.01.T01:intron 40.0%
! GATGTTGATGGGTATTCGAA+AGG + Chr4:44846917-44846936 None:intergenic 40.0%
! GCCTGAACTATGTGAACTTT+TGG + Chr4:44849422-44849441 None:intergenic 40.0%
! GGGACATTCTGATTGGTTAT+GGG - Chr4:44857897-44857916 MsG0480020620.01.T01:intron 40.0%
! TAGATGGATGCTTTCTGAAG+GGG + Chr4:44851729-44851748 None:intergenic 40.0%
! TCACTCAAGTAAGTTGGAGA+AGG - Chr4:44855859-44855878 MsG0480020620.01.T01:intron 40.0%
! TGGGACATTCTGATTGGTTA+TGG - Chr4:44857896-44857915 MsG0480020620.01.T01:intron 40.0%
! TGTACCCATGTGGTTTTCAA+AGG - Chr4:44846502-44846521 MsG0480020620.01.T01:intron 40.0%
! TTGCTTTGCATCATCGCTTT+TGG - Chr4:44851075-44851094 MsG0480020620.01.T01:intron 40.0%
!! AAAGGCACTGGTAAATCTTG+AGG - Chr4:44849994-44850013 MsG0480020620.01.T01:intron 40.0%
!! ATGGTGAAGTTTTAGTGGGA+AGG - Chr4:44852007-44852026 MsG0480020620.01.T01:intron 40.0%
!! TGCTTTCTGAAGGGGTATTA+TGG + Chr4:44851721-44851740 None:intergenic 40.0%
!! TTCTGAAGGGGTATTATGGA+GGG + Chr4:44851717-44851736 None:intergenic 40.0%
!! TTTCTGAAGGGGTATTATGG+AGG + Chr4:44851718-44851737 None:intergenic 40.0%
!!! CCCACGGTAAGGTTTTTTTT+AGG - Chr4:44857840-44857859 MsG0480020620.01.T01:five_prime_UTR 40.0%
!!! GCAATCTTATCGGTTTTCCT+CGG + Chr4:44851492-44851511 None:intergenic 40.0%
!!! GGTTGGTTTTATAGGGATTG+TGG - Chr4:44853310-44853329 MsG0480020620.01.T01:intron 40.0%
AAAAGAAGTTCCTCCAGACG+AGG + Chr4:44846886-44846905 None:intergenic 45.0%
AACCACATGGGTACATCAAG+TGG + Chr4:44846497-44846516 None:intergenic 45.0%
AACTCCCAAAGAAAGGAGGT+TGG - Chr4:44855714-44855733 MsG0480020620.01.T01:CDS 45.0%
AAGCCTAGCTCGATCAAGAT+TGG + Chr4:44847094-44847113 None:intergenic 45.0%
AATGGTCCTTGTACATGCTG+AGG - Chr4:44852142-44852161 MsG0480020620.01.T01:intron 45.0%
AATTCCCGAAGAAAGGAGGT+TGG - Chr4:44847786-44847805 MsG0480020620.01.T01:intron 45.0%
ACAAATCCAGGTCAAGTTCC+TGG + Chr4:44846652-44846671 None:intergenic 45.0%
ACAGATCCAAGTCAAGTTCC+TGG + Chr4:44854576-44854595 None:intergenic 45.0%
ACATGTGTACATCATGTGGC+TGG + Chr4:44854525-44854544 None:intergenic 45.0%
ACCAAGACTCTCGAATCTCT+TGG - Chr4:44857982-44858001 MsG0480020620.01.T01:five_prime_UTR 45.0%
ACCCACATGTGTACATCATG+TGG + Chr4:44854529-44854548 None:intergenic 45.0%
ACCGTGGGACATTTGTTTCA+TGG + Chr4:44857828-44857847 None:intergenic 45.0%
AGAAAGAACTTCGAGTGACG+GGG + Chr4:44847022-44847041 None:intergenic 45.0%
AGAAATCCTCCGTACCAGTA+TGG - Chr4:44848018-44848037 MsG0480020620.01.T01:CDS 45.0%
AGATCATTTGGGTGCCTTCA+AGG - Chr4:44848390-44848409 MsG0480020620.01.T01:CDS 45.0%
AGCCACATGATGTACACATG+TGG - Chr4:44854524-44854543 MsG0480020620.01.T01:intron 45.0%
ATCTGGTTGTCCACATTTGG+AGG - Chr4:44854798-44854817 MsG0480020620.01.T01:intron 45.0%
ATGAGGAGTGGACAACTCAT+AGG - Chr4:44849619-44849638 MsG0480020620.01.T01:intron 45.0%
ATGTTAATCCTGCATCACGG+TGG + Chr4:44851754-44851773 None:intergenic 45.0%
ATTGTTGGCAGGATGTTGTG+GGG - Chr4:44856052-44856071 MsG0480020620.01.T01:CDS 45.0%
ATTTACAGGCAAGTCCTACG+AGG + Chr4:44848672-44848691 None:intergenic 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - Chr4:44857955-44857974 MsG0480020620.01.T01:five_prime_UTR 45.0%
CCTTGTCTTGAGGAAAACCA+TGG - Chr4:44850315-44850334 MsG0480020620.01.T01:intron 45.0%
CTTCACTTCACCTTGTCTTG+AGG - Chr4:44850305-44850324 MsG0480020620.01.T01:intron 45.0%
GAAACAAATGTCCCACGGTA+AGG - Chr4:44857829-44857848 MsG0480020620.01.T01:intron 45.0%
GAAATCCTCCGTACCAGTAT+GGG - Chr4:44848019-44848038 MsG0480020620.01.T01:CDS 45.0%
GAAATGTGAGGATGGAAGGA+TGG - Chr4:44852063-44852082 MsG0480020620.01.T01:intron 45.0%
GACTCTCGAATCTCTTGGAT+AGG - Chr4:44857987-44858006 MsG0480020620.01.T01:five_prime_UTR 45.0%
GCACAAGAAGAGCAAAGACT+TGG - Chr4:44855455-44855474 MsG0480020620.01.T01:intron 45.0%
GCCACATGATGTACACATGT+GGG - Chr4:44854525-44854544 MsG0480020620.01.T01:intron 45.0%
GGATGGAGGGATGAAATTGA+TGG - Chr4:44852225-44852244 MsG0480020620.01.T01:intron 45.0%
GGTATTATGGAGGGCAATTG+TGG + Chr4:44851708-44851727 None:intergenic 45.0%
GGTCTTCACTGAATCCTTGA+AGG + Chr4:44848407-44848426 None:intergenic 45.0%
GGTGGTCTTCATTGACATCT+TGG + Chr4:44856428-44856447 None:intergenic 45.0%
GTATGCTCAAACTGCTTGTG+TGG - Chr4:44848927-44848946 MsG0480020620.01.T01:intron 45.0%
GTTTCCAACCTCCTTTCTTC+GGG + Chr4:44847793-44847812 None:intergenic 45.0%
TAACGGAGAGATTGGATGGA+GGG - Chr4:44852212-44852231 MsG0480020620.01.T01:intron 45.0%
TATACTCAGGTGTTCAGCTC+AGG - Chr4:44854117-44854136 MsG0480020620.01.T01:intron 45.0%
TATGCAGTTTCTCAGCAAGG+AGG - Chr4:44847299-44847318 MsG0480020620.01.T01:CDS 45.0%
TATGCAGTTTCTCAGCATGG+AGG - Chr4:44855218-44855237 MsG0480020620.01.T01:CDS 45.0%
TCACTAACGGAGAGATTGGA+TGG - Chr4:44852208-44852227 MsG0480020620.01.T01:intron 45.0%
TCCAAGAGATTCGAGAGTCT+TGG + Chr4:44857986-44858005 None:intergenic 45.0%
TCGTACCCATACTAGTAAGG+AGG + Chr4:44855954-44855973 None:intergenic 45.0%
TCTAGTCCTCAGCATGTACA+AGG + Chr4:44852151-44852170 None:intergenic 45.0%
TGTCCAATCTTGATCGAGCT+AGG - Chr4:44847088-44847107 MsG0480020620.01.T01:intron 45.0%
TGTGCACATGTGGGTTTCAA+AGG - Chr4:44846610-44846629 MsG0480020620.01.T01:intron 45.0%
TTAGGGTTTCTGTTAGCTGG+TGG - Chr4:44853202-44853221 MsG0480020620.01.T01:intron 45.0%
TTAGTGGGAAGGAGAAGAGT+CGG - Chr4:44852018-44852037 MsG0480020620.01.T01:intron 45.0%
TTCATCTCCGTGAAACTGTG+AGG - Chr4:44854728-44854747 MsG0480020620.01.T01:intron 45.0%
TTGAGTGAGTGAGTGAGTGT+TGG + Chr4:44845100-44845119 None:intergenic 45.0%
TTTGGTATGATGTTGTGGGG+TGG - Chr4:44848124-44848143 MsG0480020620.01.T01:intron 45.0%
! AGACTGGTTGTAAGACATGC+CGG + Chr4:44847843-44847862 None:intergenic 45.0%
! ATCACAGGGTCTGAAATCTC+TGG + Chr4:44846372-44846391 None:intergenic 45.0%
! CATGATTTGCAGGCACTAAC+TGG + Chr4:44849749-44849768 None:intergenic 45.0%
! CCATGGTTTTCCTCAAGACA+AGG + Chr4:44850318-44850337 None:intergenic 45.0%
! CTATATTCTCGGTGCGTCTT+TGG + Chr4:44854363-44854382 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTGCG+GGG - Chr4:44846721-44846740 MsG0480020620.01.T01:intron 45.0%
! GAGTTCAGAGTAACGGAAAG+AGG + Chr4:44853071-44853090 None:intergenic 45.0%
! GTCTTGTTGGCAGAAAGTTG+AGG - Chr4:44853698-44853717 MsG0480020620.01.T01:intron 45.0%
! GTGAGCACGACATTAGTTCT+AGG - Chr4:44850958-44850977 MsG0480020620.01.T01:intron 45.0%
!! ATCTGGTTGACTTGTACTGC+TGG + Chr4:44856576-44856595 None:intergenic 45.0%
!! CTTAAACATGAGGTACCGTG+AGG + Chr4:44857368-44857387 None:intergenic 45.0%
!! GACGGGGCATTAATTTGTAG+TGG + Chr4:44847006-44847025 None:intergenic 45.0%
!! GGTGTTGATGGGTAATGCAA+AGG + Chr4:44854842-44854861 None:intergenic 45.0%
!! TCCCAATGGGCTTTTGATGA+AGG + Chr4:44851676-44851695 None:intergenic 45.0%
!! TGGCGGACTCTAACACATAT+TGG + Chr4:44851609-44851628 None:intergenic 45.0%
!!! TTTTATGTTCTGGGGGGATG+AGG - Chr4:44849602-44849621 MsG0480020620.01.T01:intron 45.0%
!!! AATATTGAATAATTAATTTT+TGG + Chr4:44848345-44848364 None:intergenic 5.0%
ACATGGGTACATCAAGTGGC+TGG + Chr4:44846493-44846512 None:intergenic 50.0%
ACCCACATGTGCACATCATG+TGG + Chr4:44846605-44846624 None:intergenic 50.0%
AGAGACCAGCCTCGAATTCT+TGG - Chr4:44857924-44857943 MsG0480020620.01.T01:intron 50.0%
AGCCACATGATGTGCACATG+TGG - Chr4:44846600-44846619 MsG0480020620.01.T01:intron 50.0%
AGCCACTTGATGTACCCATG+TGG - Chr4:44846492-44846511 MsG0480020620.01.T01:intron 50.0%
AGGAGGTTGGAAACTCCAGA+TGG - Chr4:44855727-44855746 MsG0480020620.01.T01:CDS 50.0%
AGGAGGTTGGAAACTCGAGT+TGG - Chr4:44847799-44847818 MsG0480020620.01.T01:intron 50.0%
AGTAGATTAAGAGGGTGGGG+TGG + Chr4:44856446-44856465 None:intergenic 50.0%
CAAGGTCCAGGAACTTGACT+TGG - Chr4:44854567-44854586 MsG0480020620.01.T01:intron 50.0%
CATCTAAACCACCGTGATGC+AGG - Chr4:44851743-44851762 MsG0480020620.01.T01:intron 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - Chr4:44857954-44857973 MsG0480020620.01.T01:five_prime_UTR 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + Chr4:44857957-44857976 None:intergenic 50.0%
CTAACGGAGAGATTGGATGG+AGG - Chr4:44852211-44852230 MsG0480020620.01.T01:intron 50.0%
CTAAGGCTTCGTAGCGACAA+AGG - Chr4:44854496-44854515 MsG0480020620.01.T01:intron 50.0%
CTGCATCACGGTGGTTTAGA+TGG + Chr4:44851745-44851764 None:intergenic 50.0%
GAATGGTCGGTGTGCTACAA+AGG - Chr4:44849976-44849995 MsG0480020620.01.T01:intron 50.0%
GAGCCAAGCTCTCGAATTCT+TGG - Chr4:44857951-44857970 MsG0480020620.01.T01:five_prime_UTR 50.0%
GCATGCTGGGTGACTAAGTA+TGG + Chr4:44847252-44847271 None:intergenic 50.0%
GCCACATGATGTGCACATGT+GGG - Chr4:44846601-44846620 MsG0480020620.01.T01:intron 50.0%
GCCACTATCTGATAGAGGGA+GGG - Chr4:44857200-44857219 MsG0480020620.01.T01:intron 50.0%
GCTACAAATGGTCAGGCTCA+TGG - Chr4:44850511-44850530 MsG0480020620.01.T01:intron 50.0%
GGAGGTTGGAAACTCCAGAT+GGG - Chr4:44855728-44855747 MsG0480020620.01.T01:CDS 50.0%
GGAGGTTGGAAACTCGAGTT+GGG - Chr4:44847800-44847819 MsG0480020620.01.T01:intron 50.0%
GGCATTAGATCTCAAGGTCC+AGG - Chr4:44846631-44846650 MsG0480020620.01.T01:intron 50.0%
GGTACATCAAGTGGCTGGTA+TGG + Chr4:44846488-44846507 None:intergenic 50.0%
GTATGCTCGAACTGCTTGTG+TGG - Chr4:44856951-44856970 MsG0480020620.01.T01:intron 50.0%
GTGAGTGAGTGAGAGAGAGA+TGG + Chr4:44852713-44852732 None:intergenic 50.0%
TAAGCTGAACGCAGGAGGAA+AGG + Chr4:44846180-44846199 None:intergenic 50.0%
TACTGCAGAGTACAATCCCC+AGG - Chr4:44849105-44849124 MsG0480020620.01.T01:intron 50.0%
TAGTGGGAAGGAGAAGAGTC+GGG - Chr4:44852019-44852038 MsG0480020620.01.T01:intron 50.0%
TCACACGTGGAAAGCCTAAG+CGG + Chr4:44854622-44854641 None:intergenic 50.0%
TCATACCCATACTGGTACGG+AGG + Chr4:44848027-44848046 None:intergenic 50.0%
TCCCTCCCTCTATCAGATAG+TGG + Chr4:44857204-44857223 None:intergenic 50.0%
TCTATCTGGTTGTCCTCGTC+TGG - Chr4:44846870-44846889 MsG0480020620.01.T01:intron 50.0%
TGCCACTATCTGATAGAGGG+AGG - Chr4:44857199-44857218 MsG0480020620.01.T01:intron 50.0%
TGGGGATTGTACTCTGCAGT+AGG + Chr4:44849106-44849125 None:intergenic 50.0%
TTTCCTCCTGCGTTCAGCTT+AGG - Chr4:44846179-44846198 MsG0480020620.01.T01:intron 50.0%
!! ACATGAGGTACCGTGAGGTT+TGG + Chr4:44857363-44857382 None:intergenic 50.0%
!! GCAGACTGACTCCCATCTTT+TGG + Chr4:44846319-44846338 None:intergenic 50.0%
!! GCAGATCGACTCCCATCTTT+TGG + Chr4:44854257-44854276 None:intergenic 50.0%
AGACATGCCGGAGTCACTGA+AGG + Chr4:44847831-44847850 None:intergenic 55.0%
AGACATGCCGGAGTCACTGA+TGG + Chr4:44847831-44847850 None:intergenic 55.0%
ATCTGGTTGTCCTCGTCTGG+AGG - Chr4:44846873-44846892 MsG0480020620.01.T01:intron 55.0%
CAAGGTCCAGGAACTTGACC+TGG - Chr4:44846643-44846662 MsG0480020620.01.T01:intron 55.0%
CAGGTGTTCAGCTCAGGTCA+TGG - Chr4:44854123-44854142 MsG0480020620.01.T01:intron 55.0%
CATCAAGTGGCTGGTATGGC+TGG + Chr4:44846484-44846503 None:intergenic 55.0%
CCATGACCTAAGCTGAACGC+AGG + Chr4:44846188-44846207 None:intergenic 55.0%
CCTGCGTTCAGCTTAGGTCA+TGG - Chr4:44846185-44846204 MsG0480020620.01.T01:intron 55.0%
CTCCTCCAAGAATTCGAGGC+TGG + Chr4:44857932-44857951 None:intergenic 55.0%
GACCAGCCTCGAATTCTTGG+AGG - Chr4:44857927-44857946 MsG0480020620.01.T01:five_prime_UTR 55.0%
GGCTCTCCTCCAAGAATTCG+AGG + Chr4:44857936-44857955 None:intergenic 55.0%
GGGGGAGGGAGTAGATAGAA+AGG - Chr4:44852665-44852684 MsG0480020620.01.T01:intron 55.0%
GGTTGGAAACTCCAGATGGG+TGG - Chr4:44855731-44855750 MsG0480020620.01.T01:CDS 55.0%
GTGACTCACACGTGGAAAGC+CGG + Chr4:44846702-44846721 None:intergenic 55.0%
TGACCTAAGCTGAACGCAGG+AGG + Chr4:44846185-44846204 None:intergenic 55.0%
TTCCACGTGTGAGTCACTCG+TGG - Chr4:44846705-44846724 MsG0480020620.01.T01:intron 55.0%
! CGGTGCGTCTTTGGAAAGCA+AGG + Chr4:44854354-44854373 None:intergenic 55.0%
! TCGGTGTGCTACAAAGGCAC+TGG - Chr4:44849982-44850001 MsG0480020620.01.T01:intron 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG - Chr4:44847803-44847822 MsG0480020620.01.T01:intron 55.0%
CACTGAAGGCTCCACCCATC+TGG + Chr4:44855745-44855764 None:intergenic 60.0%
GACCACGAGTGACTCACACG+TGG + Chr4:44846710-44846729 None:intergenic 60.0%
GGTGGAGCCATCAGTGACTC+CGG - Chr4:44847821-44847840 MsG0480020620.01.T01:intron 60.0%
GGTGGAGCCTTCAGTGACTC+CGG - Chr4:44855749-44855768 MsG0480020620.01.T01:intron 60.0%
GTTGGCAGGATGTTGTGGGG+TGG - Chr4:44856055-44856074 MsG0480020620.01.T01:CDS 60.0%
TCACACGTGGAAAGCCGGAG+CGG + Chr4:44846697-44846716 None:intergenic 60.0%
!! TGTTCTGGGGGGATGAGGAG+TGG - Chr4:44849607-44849626 MsG0480020620.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 44845061 44858008 44845061 ID=MsG0480020620.01;Name=MsG0480020620.01
Chr4 mRNA 44845061 44858008 44845061 ID=MsG0480020620.01.T01;Parent=MsG0480020620.01;Name=MsG0480020620.01.T01;_AED=0.36;_eAED=0.36;_QI=843|0.4|0.45|0.81|0.7|0.63|11|0|604
Chr4 exon 44845061 44845136 44845061 ID=MsG0480020620.01.T01:exon:19113;Parent=MsG0480020620.01.T01
Chr4 exon 44845224 44845286 44845224 ID=MsG0480020620.01.T01:exon:19112;Parent=MsG0480020620.01.T01
Chr4 exon 44847216 44847370 44847216 ID=MsG0480020620.01.T01:exon:19111;Parent=MsG0480020620.01.T01
Chr4 exon 44847939 44848102 44847939 ID=MsG0480020620.01.T01:exon:19110;Parent=MsG0480020620.01.T01
Chr4 exon 44848300 44848930 44848300 ID=MsG0480020620.01.T01:exon:19109;Parent=MsG0480020620.01.T01
Chr4 exon 44855029 44855298 44855029 ID=MsG0480020620.01.T01:exon:19108;Parent=MsG0480020620.01.T01
Chr4 exon 44855695 44855763 44855695 ID=MsG0480020620.01.T01:exon:19107;Parent=MsG0480020620.01.T01
Chr4 exon 44855860 44856873 44855860 ID=MsG0480020620.01.T01:exon:19106;Parent=MsG0480020620.01.T01
Chr4 exon 44857413 44857471 44857413 ID=MsG0480020620.01.T01:exon:19105;Parent=MsG0480020620.01.T01
Chr4 exon 44857831 44857903 44857831 ID=MsG0480020620.01.T01:exon:19104;Parent=MsG0480020620.01.T01
Chr4 exon 44857925 44858008 44857925 ID=MsG0480020620.01.T01:exon:19103;Parent=MsG0480020620.01.T01
Chr4 five_prime_UTR 44857925 44858008 44857925 ID=MsG0480020620.01.T01:five_prime_utr;Parent=MsG0480020620.01.T01
Chr4 five_prime_UTR 44857831 44857903 44857831 ID=MsG0480020620.01.T01:five_prime_utr;Parent=MsG0480020620.01.T01
Chr4 five_prime_UTR 44857413 44857471 44857413 ID=MsG0480020620.01.T01:five_prime_utr;Parent=MsG0480020620.01.T01
Chr4 five_prime_UTR 44856247 44856873 44856247 ID=MsG0480020620.01.T01:five_prime_utr;Parent=MsG0480020620.01.T01
Chr4 CDS 44855860 44856246 44855860 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44855695 44855763 44855695 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44855029 44855298 44855029 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44848300 44848930 44848300 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44847939 44848102 44847939 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44847216 44847370 44847216 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44845224 44845286 44845224 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Chr4 CDS 44845061 44845136 44845061 ID=MsG0480020620.01.T01:cds;Parent=MsG0480020620.01.T01
Gene Sequence

>MsG0480020620.01.T01

ATGTATTCTATCTTTGAGGATAGTATAGAGTATGATCTCAATACTTTTCTATCTGGTTGTCCTCGTCTGGAGGAACTTCTTTTAAATGAGACCTTTCGAATACCCATCAACATCTCTTTTCACTTATTGAAGAGATTATTCCTTTATTTATTTATGCCTACTTCTGTTATTACGTGTTGTCCACTACAAATTAATGCCCCGTCACTCGAAGTTCTTTCTATTACTGATTTTTCATTGAAACCTAGAAAGTATGAGTTTGCAAGCTTGTCCAATCTTGATCGAGCTAGGCTTTCCATTTGTAAGCTTCCGGATTTTAACAATTTGTATACACTCTGGAAAGGACTTTCTAATGTCAAATCATTGGCTCTCGGTTCTAACACTTTTCATTTTCTCAGCAAGGAGGACAAACTTGACAACTTACATCTTCTCACTTTTCACAGTTTGTTATATTTATCGAGAAAAATTCAAATCAATTCCCGAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGAGCCATCAGTGACTCCGGCATGTCTTACAACCAGTCTCGTTACATTTGAATTTAAAGGAATTCAAGACATAGAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGTTAGAGAAGGTAAAGATTTTCGCACCCGGTTTAAAGAAAAGAAGAGTAGAAAAAAGTTTGCGCAAGGGGTCAAAGAAATCCTCCGTACCAGTATGGGTCATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTATCATATTTGTTCTTTCCTATCAACAAAAGAGTGTTATAGAACATGTGTTCTATCCAAAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCTGTGATGTCCAAAGAAGAAATCAAAAACCTTGCTTTCCAAAGACGCACCGAGAATATAGCCAAACTAATGCAAGAGAGACAGATGGGCTGCCAGCCACATAATGTACACATGTGGGTTTCAAAGGCATTTGTAGATTCTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGGCTTCGTAGCGACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCTCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGAGGTATTCTATGTTTGATGACGCTGATCTTTCATTGACTCCTAGAAAATATGACTTCACAAACTTATCCACTCTTGATGAAGCTGCTATTTGCATTTGTAAGCGTCTGGATTTTAACAATTTGTATACACTCATGAAAGGACTTTCGAATGTCAAAACATTGGTTCTCGGTTCTAAAACTTTTCATAGAAAAATTGAAATCAACTCCCAAAGAAAGGAGGTTGGAAACTCCAGATGGGTGGAGCCTTCAGTGACTCCGGCATGTCTTACAACCAGTCTCATTACATTTGAATTTAAAGGAATTCAAAACATAAAACTGAGTTGGACTTTACGCGATATATTATATCAACTTAGGAAGGTTATTCATAGGAATGAATTTCTCATCCATGAAACAAATGTCCCACGCCTCGAATTCTTGGAGGAGAGCCAAGCTCTCGAATTCTTGGAGGGAGATACCAAGACTCTCGAATCTCTTGGATAG
Protein sequence

>MsG0480020620.01.T01

MYSIFEDSIEYDLNTFLSGCPRLEELLLNETFRIPINISFHLLKRLFLYLFMPTSVITCCPLQINAPSLEVLSITDFSLKPRKYEFASLSNLDRARLSICKLPDFNNLYTLWKGLSNVKSLALGSNTFHFLSKEDKLDNLHLLTFHSLLYLSRKIQINSRRKEVGNSSWVEPSVTPACLTTSLVTFEFKGIQDIETELDFTRYIVSHSSKLEKVKIFAPGLKKRRVEKSLRKGSKKSSVPVWVMACSDEEHDRLSNLSDDLIYHICSFLSTKECYRTCVLSKRWESICTKIPNLHFQLPEISDPVMSKEEIKNLAFQRRTENIAKLMQERQMGCQPHNVHMWVSKAFVDSALLRRTENIRKLRLRSDKGCQPHDVHMWVSKALDLKVQELDLDLFLHEKILLPLRLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVRYSMFDDADLSLTPRKYDFTNLSTLDEAAICICKRLDFNNLYTLMKGLSNVKTLVLGSKTFHRKIEINSQRKEVGNSRWVEPSVTPACLTTSLITFEFKGIQNIKLSWTLRDILYQLRKVIHRNEFLIHETNVPRLEFLEESQALEFLEGDTKTLESLG*