Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021048.01.T01 | XP_003606644.3 | 96.667 | 150 | 3 | 1 | 1 | 150 | 1 | 148 | 9.81E-94 | 278 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021048.01.T01 | Q2HU68 | 93.893 | 131 | 8 | 0 | 20 | 150 | 18 | 148 | 6.49E-83 | 243 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021048.01.T01 | A0A396I5J8 | 96.667 | 150 | 3 | 1 | 1 | 150 | 1 | 148 | 4.69e-94 | 278 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004120.01 | MsG0480021048.01 | 0.818327 | 2.076851e-52 | 1.549844e-49 |
MsG0180005048.01 | MsG0480021048.01 | 0.833704 | 4.576749e-56 | 5.312448e-53 |
MsG0380014666.01 | MsG0480021048.01 | 0.818754 | 1.661857e-52 | 1.254850e-49 |
MsG0480020398.01 | MsG0480021048.01 | 0.814787 | 1.289565e-51 | 8.734605e-49 |
MsG0480020920.01 | MsG0480021048.01 | 0.810264 | 1.256696e-50 | 7.540514e-48 |
MsG0480020921.01 | MsG0480021048.01 | 0.903618 | 2.880908e-79 | 4.297546e-75 |
MsG0480020926.01 | MsG0480021048.01 | 0.921069 | 5.739869e-88 | 2.010884e-83 |
MsG0480020969.01 | MsG0480021048.01 | 0.803046 | 4.201903e-49 | 2.090345e-46 |
MsG0480020970.01 | MsG0480021048.01 | 0.899222 | 2.453594e-77 | 3.005172e-73 |
MsG0480021015.01 | MsG0480021048.01 | 0.841544 | 4.455991e-58 | 6.569166e-55 |
MsG0480021048.01 | MsG0480021100.01 | 0.846081 | 2.717485e-59 | 4.623442e-56 |
MsG0480021048.01 | MsG0480021301.01 | 0.892916 | 1.020665e-74 | 9.517796e-71 |
MsG0480021048.01 | MsG0480021902.01 | 0.808313 | 3.292788e-50 | 1.876623e-47 |
MsG0480021048.01 | MsG0480022307.01 | 0.861164 | 1.243644e-63 | 3.485541e-60 |
MsG0480021048.01 | MsG0480023003.01 | 0.817206 | 3.718637e-52 | 2.690893e-49 |
MsG0480021048.01 | MsG0480023424.01 | 0.835579 | 1.545646e-56 | 1.897996e-53 |
MsG0480021048.01 | MsG0480023426.01 | 0.846033 | 2.800648e-59 | 4.757943e-56 |
MsG0480021048.01 | MsG0480023706.01 | 0.811251 | 7.685213e-51 | 4.733800e-48 |
MsG0480021048.01 | MsG0480023842.01 | 0.818467 | 1.930786e-52 | 1.446525e-49 |
MsG0480021048.01 | MsG0580025504.01 | 0.825660 | 4.153165e-54 | 3.809595e-51 |
MsG0480021048.01 | MsG0580026343.01 | 0.804847 | 1.774611e-49 | 9.247511e-47 |
MsG0480021048.01 | MsG0580028955.01 | 0.883944 | 2.921066e-71 | 1.890106e-67 |
MsG0480021048.01 | MsG0780036534.01 | 0.823289 | 1.500950e-53 | 1.286901e-50 |
MsG0480021048.01 | MsG0780040671.01 | 0.805045 | 1.613584e-49 | 8.450867e-47 |
MsG0480021048.01 | MsG0780040899.01 | 0.828098 | 1.085627e-54 | 1.068476e-51 |
MsG0480021048.01 | MsG0780041273.01 | 0.880134 | 7.049883e-70 | 3.926740e-66 |
MsG0480021048.01 | MsG0780041546.01 | 0.812160 | 4.876446e-51 | 3.077384e-48 |
MsG0480021048.01 | MsG0880044437.01 | 0.825489 | 4.559401e-54 | 4.161758e-51 |
MsG0480021048.01 | MsG0880045015.01 | 0.831043 | 2.087970e-55 | 2.239330e-52 |
MsG0380017128.01 | MsG0480021048.01 | 0.811717 | 6.089533e-51 | 3.797220e-48 |
MsG0380017696.01 | MsG0480021048.01 | 0.812437 | 4.242427e-51 | 2.697505e-48 |
MsG0380017932.01 | MsG0480021048.01 | 0.801075 | 1.068215e-48 | 5.055193e-46 |
MsG0280007919.01 | MsG0480021048.01 | 0.901551 | 2.390447e-78 | 3.246028e-74 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021048.01.T01 | MTR_4g064005 | 96.000 | 150 | 4 | 1 | 1 | 150 | 1 | 148 | 7.59e-97 | 276 |
MsG0480021048.01.T01 | MTR_2g096610 | 93.893 | 131 | 8 | 0 | 20 | 150 | 18 | 148 | 6.31e-84 | 243 |
MsG0480021048.01.T01 | MTR_4g064967 | 95.333 | 150 | 5 | 1 | 1 | 150 | 1 | 148 | 5.36e-83 | 241 |
MsG0480021048.01.T01 | MTR_4g063410 | 94.000 | 150 | 7 | 1 | 1 | 150 | 1 | 148 | 4.45e-82 | 238 |
MsG0480021048.01.T01 | MTR_4g071150 | 92.763 | 152 | 9 | 1 | 1 | 150 | 1 | 152 | 1.16e-81 | 237 |
MsG0480021048.01.T01 | MTR_4g063280 | 93.182 | 132 | 8 | 1 | 20 | 150 | 14 | 145 | 1.93e-81 | 236 |
MsG0480021048.01.T01 | MTR_2g096570 | 87.662 | 154 | 14 | 2 | 1 | 150 | 1 | 153 | 1.64e-77 | 227 |
MsG0480021048.01.T01 | MTR_8g086640 | 96.212 | 132 | 5 | 0 | 1 | 132 | 1 | 132 | 1.24e-74 | 219 |
MsG0480021048.01.T01 | MTR_7g113160 | 79.699 | 133 | 26 | 1 | 10 | 142 | 13 | 144 | 9.21e-71 | 209 |
MsG0480021048.01.T01 | MTR_7g114060 | 74.803 | 127 | 28 | 1 | 3 | 129 | 2 | 124 | 7.72e-60 | 182 |
MsG0480021048.01.T01 | MTR_7g114040 | 74.803 | 127 | 28 | 1 | 3 | 129 | 2 | 124 | 7.72e-60 | 182 |
MsG0480021048.01.T01 | MTR_7g108320 | 75.591 | 127 | 25 | 3 | 4 | 129 | 6 | 127 | 8.32e-60 | 182 |
MsG0480021048.01.T01 | MTR_7g093910 | 73.016 | 126 | 31 | 1 | 4 | 129 | 5 | 127 | 3.53e-59 | 180 |
MsG0480021048.01.T01 | MTR_2g082510 | 74.790 | 119 | 30 | 0 | 11 | 129 | 3 | 121 | 1.17e-58 | 178 |
MsG0480021048.01.T01 | MTR_2g082220 | 73.950 | 119 | 31 | 0 | 11 | 129 | 3 | 121 | 1.54e-57 | 176 |
MsG0480021048.01.T01 | MTR_6g005150 | 64.567 | 127 | 31 | 3 | 24 | 149 | 26 | 139 | 4.95e-48 | 152 |
MsG0480021048.01.T01 | MTR_7g114050 | 68.333 | 120 | 23 | 3 | 17 | 132 | 10 | 118 | 1.82e-45 | 145 |
MsG0480021048.01.T01 | MTR_4g063300 | 75.238 | 105 | 21 | 1 | 45 | 149 | 10 | 109 | 2.86e-45 | 144 |
MsG0480021048.01.T01 | MTR_1g011750 | 59.292 | 113 | 44 | 2 | 21 | 132 | 23 | 134 | 6.84e-36 | 121 |
MsG0480021048.01.T01 | MTR_1g011850 | 59.292 | 113 | 44 | 2 | 21 | 132 | 23 | 134 | 6.84e-36 | 121 |
MsG0480021048.01.T01 | MTR_1g114050 | 59.633 | 109 | 42 | 2 | 21 | 128 | 20 | 127 | 6.89e-35 | 118 |
MsG0480021048.01.T01 | MTR_1g071040 | 61.538 | 104 | 38 | 2 | 26 | 128 | 28 | 130 | 3.34e-34 | 117 |
MsG0480021048.01.T01 | MTR_1g069770 | 47.917 | 96 | 49 | 1 | 45 | 139 | 9 | 104 | 2.31e-24 | 90.9 |
MsG0480021048.01.T01 | MTR_7g010440 | 70.588 | 51 | 15 | 0 | 78 | 128 | 122 | 172 | 1.58e-16 | 74.7 |
MsG0480021048.01.T01 | MTR_4g005910 | 74.419 | 43 | 11 | 0 | 87 | 129 | 4 | 46 | 2.83e-16 | 68.9 |
MsG0480021048.01.T01 | MTR_4g048490 | 43.810 | 105 | 30 | 2 | 24 | 128 | 26 | 101 | 4.00e-16 | 69.7 |
MsG0480021048.01.T01 | MTR_7g027610 | 41.818 | 110 | 38 | 3 | 20 | 128 | 10 | 94 | 3.89e-15 | 67.4 |
MsG0480021048.01.T01 | MTR_2g096590 | 72.500 | 40 | 11 | 0 | 110 | 149 | 12 | 51 | 4.92e-12 | 57.8 |
MsG0480021048.01.T01 | MTR_0653s0030 | 36.364 | 99 | 53 | 2 | 56 | 146 | 44 | 140 | 1.12e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021048.01.T01 | AT5G02560 | 81.046 | 153 | 26 | 1 | 1 | 150 | 1 | 153 | 7.31e-78 | 228 |
MsG0480021048.01.T01 | AT5G27670 | 76.316 | 152 | 32 | 3 | 1 | 150 | 1 | 150 | 4.75e-74 | 218 |
MsG0480021048.01.T01 | AT5G02560 | 70.056 | 177 | 26 | 2 | 1 | 150 | 1 | 177 | 5.79e-73 | 216 |
MsG0480021048.01.T01 | AT5G59870 | 75.000 | 148 | 36 | 1 | 4 | 150 | 3 | 150 | 1.34e-71 | 212 |
MsG0480021048.01.T01 | AT1G51060 | 71.318 | 129 | 37 | 0 | 11 | 139 | 3 | 131 | 7.07e-61 | 184 |
MsG0480021048.01.T01 | AT4G27230 | 70.543 | 129 | 38 | 0 | 11 | 139 | 3 | 131 | 4.22e-60 | 182 |
MsG0480021048.01.T01 | AT4G27230 | 70.543 | 129 | 38 | 0 | 11 | 139 | 3 | 131 | 4.22e-60 | 182 |
MsG0480021048.01.T01 | AT3G20670 | 71.318 | 129 | 37 | 0 | 11 | 139 | 3 | 131 | 7.45e-60 | 181 |
MsG0480021048.01.T01 | AT5G54640 | 72.000 | 125 | 35 | 0 | 11 | 135 | 3 | 127 | 2.57e-58 | 177 |
MsG0480021048.01.T01 | AT1G08880 | 72.222 | 126 | 32 | 1 | 7 | 129 | 2 | 127 | 2.89e-58 | 178 |
MsG0480021048.01.T01 | AT1G54690 | 73.438 | 128 | 28 | 3 | 3 | 129 | 5 | 127 | 1.16e-57 | 176 |
MsG0480021048.01.T01 | AT2G38810 | 60.550 | 109 | 41 | 2 | 21 | 128 | 25 | 132 | 4.51e-36 | 121 |
MsG0480021048.01.T01 | AT2G38810 | 60.550 | 109 | 41 | 2 | 21 | 128 | 25 | 132 | 4.51e-36 | 121 |
MsG0480021048.01.T01 | AT2G38810 | 60.550 | 109 | 41 | 2 | 21 | 128 | 25 | 132 | 4.51e-36 | 121 |
MsG0480021048.01.T01 | AT2G38810 | 60.550 | 109 | 41 | 2 | 21 | 128 | 25 | 132 | 4.51e-36 | 121 |
MsG0480021048.01.T01 | AT1G52740 | 61.905 | 105 | 38 | 2 | 25 | 128 | 27 | 130 | 1.03e-34 | 118 |
MsG0480021048.01.T01 | AT3G54560 | 57.798 | 109 | 44 | 2 | 25 | 132 | 29 | 136 | 7.21e-34 | 116 |
MsG0480021048.01.T01 | AT3G54560 | 57.798 | 109 | 44 | 2 | 25 | 132 | 29 | 136 | 7.21e-34 | 116 |
MsG0480021048.01.T01 | AT4G13570 | 47.826 | 92 | 46 | 2 | 32 | 122 | 28 | 118 | 5.44e-20 | 80.1 |
MsG0480021048.01.T01 | AT4G13570 | 47.253 | 91 | 46 | 2 | 33 | 122 | 35 | 124 | 1.47e-19 | 79.3 |
Find 46 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGACTTTCCAGCCTTCTT+TGG | 0.239817 | 4:-52660446 | None:intergenic |
AATCAGATCTAAGCCTTCTT+TGG | 0.251178 | 4:-52660467 | None:intergenic |
GAGCTTGGTAAATTACTTTC+TGG | 0.258692 | 4:+52660332 | MsG0480021048.01.T01:CDS |
CTTGTCACCGACTTCTTCCT+TGG | 0.333455 | 4:-52660086 | None:intergenic |
CGCTGCTGAAGTTCTTGAAT+TGG | 0.356335 | 4:+52660232 | MsG0480021048.01.T01:CDS |
CGATTCTTCCCACTGGGAAC+TGG | 0.359689 | 4:-52660127 | None:intergenic |
TTCTTTGGCTCTTTGTTAGC+AGG | 0.375405 | 4:-52660431 | None:intergenic |
AGAACTGCTGCTAGGTATAC+TGG | 0.389575 | 4:-52660200 | None:intergenic |
TTTCATTCTTCTTAGGCAAA+AGG | 0.417964 | 4:-52660400 | None:intergenic |
TATGCTCAGCGTGTCGGAAC+AGG | 0.432163 | 4:+52660173 | MsG0480021048.01.T01:CDS |
GGCATGTGTTGTTGGCTGTT+AGG | 0.442957 | 4:+52660300 | MsG0480021048.01.T01:CDS |
AAAAGGATAGGGTTAATGTT+TGG | 0.446113 | 4:-52660383 | None:intergenic |
TCCTCCTCCTTTCCTTCCAC+CGG | 0.452471 | 4:-52660063 | None:intergenic |
GCTGAAGTTCTTGAATTGGC+TGG | 0.461152 | 4:+52660236 | MsG0480021048.01.T01:CDS |
AACAAAGAGCCAAAGAAGGC+TGG | 0.466354 | 4:+52660437 | MsG0480021048.01.T01:CDS |
CATCCCAAGGCATGTGTTGT+TGG | 0.466727 | 4:+52660292 | MsG0480021048.01.T01:CDS |
AAGGGAGCCGGTGGAAGGAA+AGG | 0.471425 | 4:+52660056 | MsG0480021048.01.T01:CDS |
CAGTTCCCAGTGGGAAGAAT+CGG | 0.476269 | 4:+52660128 | MsG0480021048.01.T01:CDS |
ACAGCCAACAACACATGCCT+TGG | 0.483615 | 4:-52660296 | None:intergenic |
TTCTTCTTAGGCAAAAGGAT+AGG | 0.488209 | 4:-52660395 | None:intergenic |
TCTTCTTAGGCAAAAGGATA+GGG | 0.492139 | 4:-52660394 | None:intergenic |
TCTGGTGTCACGATTGCTCA+TGG | 0.516340 | 4:+52660350 | MsG0480021048.01.T01:CDS |
GCCGGTGGAAGGAAAGGAGG+AGG | 0.517219 | 4:+52660062 | MsG0480021048.01.T01:CDS |
ATCGGTCGATACTTGAAGAA+AGG | 0.519021 | 4:+52660146 | MsG0480021048.01.T01:CDS |
AGCACGAAGACAACAAAGAA+GGG | 0.520726 | 4:+52660038 | MsG0480021048.01.T01:CDS |
AAGCACGAAGACAACAAAGA+AGG | 0.522115 | 4:+52660037 | MsG0480021048.01.T01:CDS |
GGCTGGAAAGTCTCCAAAGA+AGG | 0.525629 | 4:+52660454 | MsG0480021048.01.T01:CDS |
CAGCCAACAACACATGCCTT+GGG | 0.536965 | 4:-52660295 | None:intergenic |
CAAAGAAGGGAGCCGGTGGA+AGG | 0.542230 | 4:+52660051 | MsG0480021048.01.T01:CDS |
TATCGACCGATTCTTCCCAC+TGG | 0.544173 | 4:-52660134 | None:intergenic |
TGCTAACAAAGAGCCAAAGA+AGG | 0.544648 | 4:+52660433 | MsG0480021048.01.T01:CDS |
GGAGCCGGTGGAAGGAAAGG+AGG | 0.549135 | 4:+52660059 | MsG0480021048.01.T01:CDS |
GTTAGGAACGATGAAGAGCT+TGG | 0.552797 | 4:+52660317 | MsG0480021048.01.T01:CDS |
GAAGGAAAGGAGGAGGACCA+AGG | 0.555100 | 4:+52660069 | MsG0480021048.01.T01:CDS |
TCCCACTGGGAACTGGAGAC+CGG | 0.556836 | 4:-52660120 | None:intergenic |
GGAAGATATGCTCAGCGTGT+CGG | 0.591142 | 4:+52660167 | MsG0480021048.01.T01:CDS |
GATATTCAAGAACTGCTGCT+AGG | 0.592671 | 4:-52660208 | None:intergenic |
ACAACAAAGAAGGGAGCCGG+TGG | 0.595449 | 4:+52660047 | MsG0480021048.01.T01:CDS |
AAGACAACAAAGAAGGGAGC+CGG | 0.597879 | 4:+52660044 | MsG0480021048.01.T01:CDS |
GTGACAAGATCAATCAGAGC+CGG | 0.601599 | 4:+52660101 | MsG0480021048.01.T01:CDS |
AGGAGGACCAAGGAAGAAGT+CGG | 0.610829 | 4:+52660079 | MsG0480021048.01.T01:CDS |
GCCGGTCTCCAGTTCCCAGT+GGG | 0.615696 | 4:+52660119 | MsG0480021048.01.T01:CDS |
ATCGACCGATTCTTCCCACT+GGG | 0.626884 | 4:-52660133 | None:intergenic |
AGAAGAATAGAATCATCCCA+AGG | 0.679264 | 4:+52660279 | MsG0480021048.01.T01:CDS |
AGCCGGTCTCCAGTTCCCAG+TGG | 0.691656 | 4:+52660118 | MsG0480021048.01.T01:CDS |
GGTGTCACGATTGCTCATGG+TGG | 0.707991 | 4:+52660353 | MsG0480021048.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AAAAGGATAGGGTTAATGTT+TGG | - | Chr4:52660386-52660405 | None:intergenic | 30.0% | |
TTTCATTCTTCTTAGGCAAA+AGG | - | Chr4:52660403-52660422 | None:intergenic | 30.0% | |
AGAAGAATAGAATCATCCCA+AGG | + | Chr4:52660279-52660298 | MsG0480021048.01.T01:CDS | 35.0% | |
GAGCTTGGTAAATTACTTTC+TGG | + | Chr4:52660332-52660351 | MsG0480021048.01.T01:CDS | 35.0% | |
TCTTCTTAGGCAAAAGGATA+GGG | - | Chr4:52660397-52660416 | None:intergenic | 35.0% | |
TTCTTCTTAGGCAAAAGGAT+AGG | - | Chr4:52660398-52660417 | None:intergenic | 35.0% | |
!!! | GCAGCTTTTTCATTCTTCTT+AGG | - | Chr4:52660410-52660429 | None:intergenic | 35.0% |
AAGCACGAAGACAACAAAGA+AGG | + | Chr4:52660037-52660056 | MsG0480021048.01.T01:CDS | 40.0% | |
AGCACGAAGACAACAAAGAA+GGG | + | Chr4:52660038-52660057 | MsG0480021048.01.T01:CDS | 40.0% | |
ATCGGTCGATACTTGAAGAA+AGG | + | Chr4:52660146-52660165 | MsG0480021048.01.T01:CDS | 40.0% | |
GATATTCAAGAACTGCTGCT+AGG | - | Chr4:52660211-52660230 | None:intergenic | 40.0% | |
TGCTAACAAAGAGCCAAAGA+AGG | + | Chr4:52660433-52660452 | MsG0480021048.01.T01:CDS | 40.0% | |
!! | TTCTTTGGCTCTTTGTTAGC+AGG | - | Chr4:52660434-52660453 | None:intergenic | 40.0% |
AACAAAGAGCCAAAGAAGGC+TGG | + | Chr4:52660437-52660456 | MsG0480021048.01.T01:CDS | 45.0% | |
AAGACAACAAAGAAGGGAGC+CGG | + | Chr4:52660044-52660063 | MsG0480021048.01.T01:CDS | 45.0% | |
AGAACTGCTGCTAGGTATAC+TGG | - | Chr4:52660203-52660222 | None:intergenic | 45.0% | |
CGCTGCTGAAGTTCTTGAAT+TGG | + | Chr4:52660232-52660251 | MsG0480021048.01.T01:CDS | 45.0% | |
GCTGAAGTTCTTGAATTGGC+TGG | + | Chr4:52660236-52660255 | MsG0480021048.01.T01:CDS | 45.0% | |
GTGACAAGATCAATCAGAGC+CGG | + | Chr4:52660101-52660120 | MsG0480021048.01.T01:CDS | 45.0% | |
GTTAGGAACGATGAAGAGCT+TGG | + | Chr4:52660317-52660336 | MsG0480021048.01.T01:CDS | 45.0% | |
ACAGCCAACAACACATGCCT+TGG | - | Chr4:52660299-52660318 | None:intergenic | 50.0% | |
AGGAGGACCAAGGAAGAAGT+CGG | + | Chr4:52660079-52660098 | MsG0480021048.01.T01:CDS | 50.0% | |
CAGCCAACAACACATGCCTT+GGG | - | Chr4:52660298-52660317 | None:intergenic | 50.0% | |
CAGTTCCCAGTGGGAAGAAT+CGG | + | Chr4:52660128-52660147 | MsG0480021048.01.T01:CDS | 50.0% | |
CATCCCAAGGCATGTGTTGT+TGG | + | Chr4:52660292-52660311 | MsG0480021048.01.T01:CDS | 50.0% | |
GGAAGATATGCTCAGCGTGT+CGG | + | Chr4:52660167-52660186 | MsG0480021048.01.T01:CDS | 50.0% | |
GGAGACTTTCCAGCCTTCTT+TGG | - | Chr4:52660449-52660468 | None:intergenic | 50.0% | |
GGCTGGAAAGTCTCCAAAGA+AGG | + | Chr4:52660454-52660473 | MsG0480021048.01.T01:CDS | 50.0% | |
! | ATCGACCGATTCTTCCCACT+GGG | - | Chr4:52660136-52660155 | None:intergenic | 50.0% |
! | GGCATGTGTTGTTGGCTGTT+AGG | + | Chr4:52660300-52660319 | MsG0480021048.01.T01:CDS | 50.0% |
! | TATCGACCGATTCTTCCCAC+TGG | - | Chr4:52660137-52660156 | None:intergenic | 50.0% |
!! | CTTGTCACCGACTTCTTCCT+TGG | - | Chr4:52660089-52660108 | None:intergenic | 50.0% |
!! | TCTGGTGTCACGATTGCTCA+TGG | + | Chr4:52660350-52660369 | MsG0480021048.01.T01:CDS | 50.0% |
ACAACAAAGAAGGGAGCCGG+TGG | + | Chr4:52660047-52660066 | MsG0480021048.01.T01:CDS | 55.0% | |
CGATTCTTCCCACTGGGAAC+TGG | - | Chr4:52660130-52660149 | None:intergenic | 55.0% | |
GAAGGAAAGGAGGAGGACCA+AGG | + | Chr4:52660069-52660088 | MsG0480021048.01.T01:CDS | 55.0% | |
TATGCTCAGCGTGTCGGAAC+AGG | + | Chr4:52660173-52660192 | MsG0480021048.01.T01:CDS | 55.0% | |
TCCTCCTCCTTTCCTTCCAC+CGG | - | Chr4:52660066-52660085 | None:intergenic | 55.0% | |
! | GGTGTCACGATTGCTCATGG+TGG | + | Chr4:52660353-52660372 | MsG0480021048.01.T01:CDS | 55.0% |
AAGGGAGCCGGTGGAAGGAA+AGG | + | Chr4:52660056-52660075 | MsG0480021048.01.T01:CDS | 60.0% | |
CAAAGAAGGGAGCCGGTGGA+AGG | + | Chr4:52660051-52660070 | MsG0480021048.01.T01:CDS | 60.0% | |
TCCCACTGGGAACTGGAGAC+CGG | - | Chr4:52660123-52660142 | None:intergenic | 60.0% | |
AGCCGGTCTCCAGTTCCCAG+TGG | + | Chr4:52660118-52660137 | MsG0480021048.01.T01:CDS | 65.0% | |
GCCGGTCTCCAGTTCCCAGT+GGG | + | Chr4:52660119-52660138 | MsG0480021048.01.T01:CDS | 65.0% | |
GCCGGTGGAAGGAAAGGAGG+AGG | + | Chr4:52660062-52660081 | MsG0480021048.01.T01:CDS | 65.0% | |
GGAGCCGGTGGAAGGAAAGG+AGG | + | Chr4:52660059-52660078 | MsG0480021048.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 52660029 | 52660481 | 52660029 | ID=MsG0480021048.01;Name=MsG0480021048.01 |
Chr4 | mRNA | 52660029 | 52660481 | 52660029 | ID=MsG0480021048.01.T01;Parent=MsG0480021048.01;Name=MsG0480021048.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|150 |
Chr4 | exon | 52660029 | 52660481 | 52660029 | ID=MsG0480021048.01.T01:exon:19968;Parent=MsG0480021048.01.T01 |
Chr4 | CDS | 52660029 | 52660481 | 52660029 | ID=MsG0480021048.01.T01:cds;Parent=MsG0480021048.01.T01 |
Gene Sequence |
Protein sequence |