AlfalfaGEDB | MsG0480020921.01

M. sativa cultivar ZhongmuNo.1 / MsG0480020921.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020921.01.T01	XP_003606644.3	96	150	4	1	1	150	1	148	2.72E-93	276

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020921.01.T01	Q2HU68	88.667	150	15	1	1	150	1	148	2.98E-83	244

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020921.01.T01	A0A396I5J8	96.000	150	4	1	1	150	1	148	1.30e-93	276

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0480020921.01	0.816695	4.844232e-52	3.456627e-49
MsG0080048220.01	MsG0480020921.01	0.819336	1.225305e-52	9.401197e-50
MsG0080048775.01	MsG0480020921.01	0.805709	1.170922e-49	6.238558e-47
MsG0180001293.01	MsG0480020921.01	0.820240	7.614476e-53	5.991868e-50
MsG0180001719.01	MsG0480020921.01	0.807971	3.893601e-50	2.199056e-47
MsG0180002134.01	MsG0480020921.01	0.823001	1.751994e-53	1.490082e-50
MsG0180002217.01	MsG0480020921.01	0.818893	1.545354e-52	1.171465e-49
MsG0180002218.01	MsG0480020921.01	0.845312	4.394147e-59	7.293227e-56
MsG0180002397.01	MsG0480020921.01	0.835353	1.762621e-56	2.150149e-53
MsG0180003857.01	MsG0480020921.01	0.820101	8.195319e-53	6.425055e-50
MsG0180004120.01	MsG0480020921.01	0.848705	5.168746e-60	9.568541e-57
MsG0180004185.01	MsG0480020921.01	0.813327	2.707200e-51	1.762606e-48
MsG0180004299.01	MsG0480020921.01	0.818685	1.722713e-52	1.298298e-49
MsG0180004538.01	MsG0480020921.01	0.854427	1.240105e-61	2.768326e-58
MsG0180004583.01	MsG0480020921.01	0.845450	4.031086e-59	6.720034e-56
MsG0180004835.01	MsG0480020921.01	0.834975	2.196466e-56	2.649010e-53
MsG0180004994.01	MsG0480020921.01	0.808815	2.572933e-50	1.485693e-47
MsG0180004995.01	MsG0480020921.01	0.843923	1.039080e-58	1.650908e-55
MsG0180005048.01	MsG0480020921.01	0.882128	1.350519e-70	8.127114e-67
MsG0180006133.01	MsG0480020921.01	0.836001	1.208697e-56	1.503261e-53
MsG0280006378.01	MsG0480020921.01	0.805585	1.243285e-49	6.602565e-47
MsG0380012956.01	MsG0480020921.01	0.841569	4.389491e-58	6.476283e-55
MsG0380014542.01	MsG0480020921.01	0.836745	7.814695e-57	9.939763e-54
MsG0380014666.01	MsG0480020921.01	0.861921	7.304078e-64	2.100382e-60
MsG0480018785.01	MsG0480020921.01	0.811188	7.932985e-51	4.878210e-48
MsG0480020398.01	MsG0480020921.01	0.842279	2.849260e-58	4.298505e-55
MsG0480020856.01	MsG0480020921.01	0.827855	1.242048e-54	1.213789e-51
MsG0480020920.01	MsG0480020921.01	0.838549	2.692221e-57	3.618181e-54
MsG0480020921.01	MsG0480020926.01	0.966161	1.493066e-125	1.006972e-119
MsG0480020921.01	MsG0480020969.01	0.802954	4.389871e-49	2.178781e-46
MsG0480020921.01	MsG0480020970.01	0.913750	4.283515e-84	1.028521e-79
MsG0480020921.01	MsG0480020971.01	0.852543	4.309538e-61	9.034857e-58
MsG0480020921.01	MsG0480021015.01	0.897960	8.464073e-77	9.796064e-73
MsG0480020921.01	MsG0480021016.01	0.877224	7.458068e-69	3.721657e-65
MsG0480020921.01	MsG0480021048.01	0.903618	2.880908e-79	4.297546e-75
MsG0480020921.01	MsG0480021100.01	0.891324	4.409118e-74	3.847953e-70
MsG0480020921.01	MsG0480021301.01	0.917096	8.042922e-86	2.281577e-81
MsG0480020921.01	MsG0480021773.01	0.845460	4.004676e-59	6.678561e-56
MsG0480020921.01	MsG0480021902.01	0.862944	3.539778e-64	1.055057e-60
MsG0480020921.01	MsG0480022307.01	0.897685	1.105728e-76	1.263369e-72
MsG0480020921.01	MsG0480022378.01	0.800380	1.481050e-48	6.886188e-46
MsG0480020921.01	MsG0480022784.01	0.837146	6.174722e-57	7.949011e-54
MsG0480020921.01	MsG0480022991.01	0.821940	3.090760e-53	2.550401e-50
MsG0480020921.01	MsG0480023003.01	0.867129	1.717801e-65	5.931093e-62
MsG0480020921.01	MsG0480023424.01	0.882530	9.641662e-71	5.893107e-67
MsG0480020921.01	MsG0480023426.01	0.907409	5.231522e-81	9.270978e-77
MsG0480020921.01	MsG0480023428.01	0.814702	1.346419e-51	9.099032e-49
MsG0480020921.01	MsG0480023653.01	0.800210	1.603869e-48	7.424887e-46
MsG0480020921.01	MsG0480023679.01	0.822053	2.909580e-53	2.408580e-50
MsG0480020921.01	MsG0480023706.01	0.843313	1.513207e-58	2.358497e-55
MsG0480020921.01	MsG0480023842.01	0.842764	2.118166e-58	3.244172e-55
MsG0480020921.01	MsG0580024276.01	0.825968	3.510376e-54	3.248427e-51
MsG0480020921.01	MsG0580024787.01	0.815392	9.467333e-52	6.518957e-49
MsG0480020921.01	MsG0580025177.01	0.828700	7.769456e-55	7.781561e-52
MsG0480020921.01	MsG0580025186.01	0.812728	3.664314e-51	2.347691e-48
MsG0480020921.01	MsG0580025504.01	0.880448	5.444925e-70	3.069685e-66
MsG0480020921.01	MsG0580025506.01	0.810432	1.156156e-50	6.967832e-48
MsG0480020921.01	MsG0580028927.01	0.805154	1.530520e-49	8.038561e-47
MsG0480020921.01	MsG0580028955.01	0.899084	2.811062e-77	3.420751e-73
MsG0480020921.01	MsG0580029591.01	0.801538	8.588400e-49	4.111862e-46
MsG0480020921.01	MsG0680035776.01	0.824526	7.696553e-54	6.834678e-51
MsG0480020921.01	MsG0780036534.01	0.877388	6.541669e-69	3.283671e-65
MsG0480020921.01	MsG0780037741.01	0.807656	4.544603e-50	2.545560e-47
MsG0480020921.01	MsG0780038736.01	0.832906	7.236027e-56	8.201347e-53
MsG0480020921.01	MsG0780039861.01	0.800396	1.469677e-48	6.836046e-46
MsG0480020921.01	MsG0780040620.01	0.878303	3.132562e-69	1.627253e-65
MsG0480020921.01	MsG0780040641.01	0.854113	1.528120e-61	3.377006e-58
MsG0480020921.01	MsG0780040671.01	0.840296	9.472838e-58	1.343352e-54
MsG0480020921.01	MsG0780040899.01	0.840227	9.870685e-58	1.396947e-54
MsG0480020921.01	MsG0780041008.01	0.802311	5.959664e-49	2.910044e-46
MsG0480020921.01	MsG0780041273.01	0.916342	1.999426e-85	5.472081e-81
MsG0480020921.01	MsG0780041359.01	0.852280	5.121687e-61	1.064946e-57
MsG0480020921.01	MsG0780041546.01	0.840570	8.028659e-58	1.148296e-54
MsG0480020921.01	MsG0880044437.01	0.829999	3.758803e-55	3.910305e-52
MsG0480020921.01	MsG0880045015.01	0.844213	8.690646e-59	1.393222e-55
MsG0480020921.01	MsG0880045612.01	0.825229	5.252466e-54	4.759321e-51
MsG0480020921.01	MsG0880045647.01	0.842963	1.875319e-58	2.890213e-55
MsG0480020921.01	MsG0880045879.01	0.801031	1.090486e-48	5.154947e-46
MsG0480020921.01	MsG0880046904.01	0.843267	1.556782e-58	2.422664e-55
MsG0480020921.01	MsG0880046905.01	0.831280	1.825209e-55	1.971322e-52
MsG0480020921.01	MsG0880047649.01	0.826653	2.410970e-54	2.274888e-51
MsG0380015090.01	MsG0480020921.01	0.834083	3.678878e-56	4.319394e-53
MsG0380015219.01	MsG0480020921.01	0.813105	3.028518e-51	1.959755e-48
MsG0380015340.01	MsG0480020921.01	0.851286	9.799965e-61	1.973870e-57
MsG0380015954.01	MsG0480020921.01	0.805371	1.378698e-49	7.281466e-47
MsG0380016027.01	MsG0480020921.01	0.825684	4.098431e-54	3.762064e-51
MsG0380016091.01	MsG0480020921.01	0.806764	7.022096e-50	3.843282e-47
MsG0380016092.01	MsG0480020921.01	0.801555	8.520553e-49	4.081059e-46
MsG0380016165.01	MsG0480020921.01	0.840743	7.235201e-58	1.040387e-54
MsG0380017332.01	MsG0480020921.01	0.835972	1.229341e-56	1.527545e-53
MsG0380017605.01	MsG0480020921.01	0.827936	1.188104e-54	1.163746e-51
MsG0380017632.01	MsG0480020921.01	0.805337	1.401760e-49	7.396671e-47
MsG0380017696.01	MsG0480020921.01	0.814531	1.469262e-51	9.883678e-49
MsG0380017932.01	MsG0480020921.01	0.830538	2.775336e-55	2.932468e-52
MsG0480018228.01	MsG0480020921.01	0.837974	3.787017e-57	5.001483e-54
MsG0280006563.01	MsG0480020921.01	0.807821	4.192400e-50	2.358426e-47
MsG0280007919.01	MsG0480020921.01	0.863455	2.459859e-64	7.460472e-61

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020921.01.T01	MTR_4g064005	95.333	150	5	1	1	150	1	148	2.38e-96	274
MsG0480020921.01.T01	MTR_2g096610	88.667	150	15	1	1	150	1	148	2.90e-84	244
MsG0480020921.01.T01	MTR_4g064967	96.000	150	4	1	1	150	1	148	9.06e-84	243
MsG0480020921.01.T01	MTR_4g071150	93.421	152	8	1	1	150	1	152	2.16e-82	239
MsG0480020921.01.T01	MTR_4g063410	93.333	150	8	1	1	150	1	148	1.60e-81	237
MsG0480020921.01.T01	MTR_4g063280	93.182	132	8	1	20	150	14	145	1.99e-81	236
MsG0480020921.01.T01	MTR_2g096570	88.312	154	13	2	1	150	1	153	3.24e-78	229
MsG0480020921.01.T01	MTR_8g086640	96.970	132	4	0	1	132	1	132	1.81e-75	222
MsG0480020921.01.T01	MTR_7g113160	79.699	133	26	1	10	142	13	144	1.09e-70	209
MsG0480020921.01.T01	MTR_7g108320	75.591	127	25	3	4	129	6	127	7.62e-60	182
MsG0480020921.01.T01	MTR_7g114060	74.803	127	28	1	3	129	2	124	8.16e-60	182
MsG0480020921.01.T01	MTR_7g114040	74.803	127	28	1	3	129	2	124	8.16e-60	182
MsG0480020921.01.T01	MTR_7g093910	73.016	126	31	1	4	129	5	127	4.35e-59	180
MsG0480020921.01.T01	MTR_2g082510	74.790	119	30	0	11	129	3	121	1.35e-58	178
MsG0480020921.01.T01	MTR_2g082220	73.950	119	31	0	11	129	3	121	1.63e-57	176
MsG0480020921.01.T01	MTR_6g005150	64.567	127	31	3	24	149	26	139	4.95e-48	152
MsG0480020921.01.T01	MTR_7g114050	68.333	120	23	3	17	132	10	118	2.22e-45	145
MsG0480020921.01.T01	MTR_4g063300	75.238	105	21	1	45	149	10	109	3.12e-45	144
MsG0480020921.01.T01	MTR_1g011750	59.292	113	44	2	21	132	23	134	7.07e-36	121
MsG0480020921.01.T01	MTR_1g011850	59.292	113	44	2	21	132	23	134	7.07e-36	121
MsG0480020921.01.T01	MTR_1g114050	59.633	109	42	2	21	128	20	127	7.35e-35	118
MsG0480020921.01.T01	MTR_1g071040	61.538	104	38	2	26	128	28	130	3.53e-34	116
MsG0480020921.01.T01	MTR_1g069770	47.917	96	49	1	45	139	9	104	2.44e-24	90.9
MsG0480020921.01.T01	MTR_7g010440	70.588	51	15	0	78	128	122	172	1.79e-16	74.7
MsG0480020921.01.T01	MTR_4g005910	74.419	43	11	0	87	129	4	46	2.80e-16	68.9
MsG0480020921.01.T01	MTR_4g048490	43.810	105	30	2	24	128	26	101	3.88e-16	69.7
MsG0480020921.01.T01	MTR_7g027610	41.818	110	38	3	20	128	10	94	4.06e-15	67.4
MsG0480020921.01.T01	MTR_2g096590	72.500	40	11	0	110	149	12	51	4.66e-12	57.8
MsG0480020921.01.T01	MTR_0653s0030	36.364	99	53	2	56	146	44	140	1.08e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020921.01.T01	AT5G02560	81.699	153	25	1	1	150	1	153	1.25e-78	230
MsG0480020921.01.T01	AT5G02560	70.621	177	25	2	1	150	1	177	1.11e-73	218
MsG0480020921.01.T01	AT5G27670	75.658	152	33	3	1	150	1	150	1.77e-73	217
MsG0480020921.01.T01	AT5G59870	75.000	148	36	1	4	150	3	150	1.39e-71	212
MsG0480020921.01.T01	AT1G51060	71.318	129	37	0	11	139	3	131	9.72e-61	184
MsG0480020921.01.T01	AT4G27230	70.543	129	38	0	11	139	3	131	4.31e-60	182
MsG0480020921.01.T01	AT4G27230	70.543	129	38	0	11	139	3	131	4.31e-60	182
MsG0480020921.01.T01	AT3G20670	71.318	129	37	0	11	139	3	131	9.18e-60	181
MsG0480020921.01.T01	AT1G08880	72.222	126	32	1	7	129	2	127	2.96e-58	178
MsG0480020921.01.T01	AT5G54640	72.000	125	35	0	11	135	3	127	3.06e-58	177
MsG0480020921.01.T01	AT1G54690	73.438	128	28	3	3	129	5	127	1.30e-57	176
MsG0480020921.01.T01	AT2G38810	60.550	109	41	2	21	128	25	132	5.08e-36	121
MsG0480020921.01.T01	AT2G38810	60.550	109	41	2	21	128	25	132	5.08e-36	121
MsG0480020921.01.T01	AT2G38810	60.550	109	41	2	21	128	25	132	5.08e-36	121
MsG0480020921.01.T01	AT2G38810	60.550	109	41	2	21	128	25	132	5.08e-36	121
MsG0480020921.01.T01	AT1G52740	61.905	105	38	2	25	128	27	130	1.07e-34	118
MsG0480020921.01.T01	AT3G54560	57.798	109	44	2	25	132	29	136	7.05e-34	116
MsG0480020921.01.T01	AT3G54560	57.798	109	44	2	25	132	29	136	7.05e-34	116
MsG0480020921.01.T01	AT4G13570	47.826	92	46	2	32	122	28	118	5.50e-20	80.1
MsG0480020921.01.T01	AT4G13570	47.253	91	46	2	33	122	35	124	1.47e-19	79.3

Find 45 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGACTTTCCAGCCTTCTT+TGG	0.239817	4:+50606314	None:intergenic
GATCAGATCTAAGCCTTCTT+TGG	0.251178	4:+50606293	None:intergenic
GAGCTTGGTAAATTACTTTC+TGG	0.258692	4:-50606428	MsG0480020921.01.T01:CDS
GAGCGTATCTTCCTTTCTTC+AGG	0.308141	4:+50606603	None:intergenic
TTCTTTGGCTCTTTGTTAGC+TGG	0.326267	4:+50606329	None:intergenic
CTTGTCACCGACTTCTTCCT+TGG	0.335895	4:+50606674	None:intergenic
GGAGCCGGAGGAAGGAAGGG+TGG	0.384609	4:-50606701	MsG0480020921.01.T01:CDS
AGAACTGCTGCTAGGTATAC+TGG	0.389575	4:+50606560	None:intergenic
CAATTTCCAGTTGGAAGAAT+CGG	0.397925	4:-50606632	MsG0480020921.01.T01:CDS
TACGCTCAGCGTGTTGGAAC+AGG	0.407073	4:-50606587	MsG0480020921.01.T01:CDS
GCCGGAGGAAGGAAGGGTGG+AGG	0.421195	4:-50606698	MsG0480020921.01.T01:CDS
GAAGGGAGCCGGAGGAAGGA+AGG	0.422190	4:-50606705	MsG0480020921.01.T01:CDS
AAGAGGATAGGGTTAATGTT+TGG	0.423690	4:+50606377	None:intergenic
TGCTGCTGAAGTTCTTGAGT+TGG	0.438702	4:-50606528	MsG0480020921.01.T01:CDS
GGCATGTGTTGTTGGCTGTT+AGG	0.442957	4:-50606460	MsG0480020921.01.T01:CDS
AACAAAGAGCCAAAGAAGGC+TGG	0.466354	4:-50606323	MsG0480020921.01.T01:CDS
TCCTCCACCCTTCCTTCCTC+CGG	0.466462	4:+50606697	None:intergenic
TATTCCAAGGCATGTGTTGT+TGG	0.470522	4:-50606468	MsG0480020921.01.T01:CDS
GCTGAAGTTCTTGAGTTGGC+TGG	0.471187	4:-50606524	MsG0480020921.01.T01:CDS
TCTTCTTAGGCAAGAGGATA+GGG	0.474984	4:+50606366	None:intergenic
TATCGACCGATTCTTCCAAC+TGG	0.484363	4:+50606626	None:intergenic
AAATTGAAGACCGGCTCTGA+TGG	0.488889	4:+50606649	None:intergenic
TTCTTCTTAGGCAAGAGGAT+AGG	0.503964	4:+50606365	None:intergenic
GAAGGAAGGGTGGAGGACCA+AGG	0.507927	4:-50606691	MsG0480020921.01.T01:CDS
AAGCACGAAGACAACAAAGA+AGG	0.514513	4:-50606723	MsG0480020921.01.T01:CDS
AAGGGAGCCGGAGGAAGGAA+GGG	0.514993	4:-50606704	MsG0480020921.01.T01:CDS
ACAGCCAACAACACATGCCT+TGG	0.515073	4:+50606464	None:intergenic
AGCACGAAGACAACAAAGAA+GGG	0.520726	4:-50606722	MsG0480020921.01.T01:CDS
ATCGGTCGATACCTGAAGAA+AGG	0.524114	4:-50606614	MsG0480020921.01.T01:CDS
GGCTGGAAAGTCTCCAAAGA+AGG	0.525629	4:-50606306	MsG0480020921.01.T01:CDS
TCTGGTGTCACAATTGCTCA+TGG	0.529253	4:-50606410	MsG0480020921.01.T01:CDS
GGAAGATACGCTCAGCGTGT+TGG	0.531317	4:-50606593	MsG0480020921.01.T01:CDS
TCCAACTGGAAATTGAAGAC+CGG	0.540370	4:+50606640	None:intergenic
AGCTAACAAAGAGCCAAAGA+AGG	0.544648	4:-50606327	MsG0480020921.01.T01:CDS
TTTCATTCTTCTTAGGCAAG+AGG	0.549215	4:+50606360	None:intergenic
AAGACAACAAAGAAGGGAGC+CGG	0.549880	4:-50606716	MsG0480020921.01.T01:CDS
CAAAGAAGGGAGCCGGAGGA+AGG	0.552147	4:-50606709	MsG0480020921.01.T01:CDS
GTTAGGAACGATGAAGAGCT+TGG	0.552797	4:-50606443	MsG0480020921.01.T01:CDS
ACAACAAAGAAGGGAGCCGG+AGG	0.563100	4:-50606713	MsG0480020921.01.T01:CDS
GCCGGTCTTCAATTTCCAGT+TGG	0.566234	4:-50606641	MsG0480020921.01.T01:CDS
GTGACAAGATCCATCAGAGC+CGG	0.589197	4:-50606659	MsG0480020921.01.T01:CDS
GATATTCAAGAACTGCTGCT+AGG	0.592671	4:+50606552	None:intergenic
AGAAGAATAGAATTATTCCA+AGG	0.617592	4:-50606481	MsG0480020921.01.T01:CDS
TGGAGGACCAAGGAAGAAGT+CGG	0.639719	4:-50606681	MsG0480020921.01.T01:CDS
GGTGTCACAATTGCTCATGG+TGG	0.701079	4:-50606407	MsG0480020921.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AGAAGAATAGAATTATTCCA+AGG	-	Chr4:50606551-50606570	MsG0480020921.01.T01:CDS	25.0%
	AAGAGGATAGGGTTAATGTT+TGG	+	Chr4:50606658-50606677	None:intergenic	35.0%
	CAATTTCCAGTTGGAAGAAT+CGG	-	Chr4:50606400-50606419	MsG0480020921.01.T01:CDS	35.0%
	GAGCTTGGTAAATTACTTTC+TGG	-	Chr4:50606604-50606623	MsG0480020921.01.T01:CDS	35.0%
	TTTCATTCTTCTTAGGCAAG+AGG	+	Chr4:50606675-50606694	None:intergenic	35.0%
!!!	GCAGCTTTTTCATTCTTCTT+AGG	+	Chr4:50606682-50606701	None:intergenic	35.0%
	AAGCACGAAGACAACAAAGA+AGG	-	Chr4:50606309-50606328	MsG0480020921.01.T01:CDS	40.0%
	AGCACGAAGACAACAAAGAA+GGG	-	Chr4:50606310-50606329	MsG0480020921.01.T01:CDS	40.0%
	AGCTAACAAAGAGCCAAAGA+AGG	-	Chr4:50606705-50606724	MsG0480020921.01.T01:CDS	40.0%
	GATATTCAAGAACTGCTGCT+AGG	+	Chr4:50606483-50606502	None:intergenic	40.0%
	TATTCCAAGGCATGTGTTGT+TGG	-	Chr4:50606564-50606583	MsG0480020921.01.T01:CDS	40.0%
	TCCAACTGGAAATTGAAGAC+CGG	+	Chr4:50606395-50606414	None:intergenic	40.0%
	TCTTCTTAGGCAAGAGGATA+GGG	+	Chr4:50606669-50606688	None:intergenic	40.0%
	TTCTTCTTAGGCAAGAGGAT+AGG	+	Chr4:50606670-50606689	None:intergenic	40.0%
!!	TTCTTTGGCTCTTTGTTAGC+TGG	+	Chr4:50606706-50606725	None:intergenic	40.0%
	AACAAAGAGCCAAAGAAGGC+TGG	-	Chr4:50606709-50606728	MsG0480020921.01.T01:CDS	45.0%
	AAGACAACAAAGAAGGGAGC+CGG	-	Chr4:50606316-50606335	MsG0480020921.01.T01:CDS	45.0%
	AGAACTGCTGCTAGGTATAC+TGG	+	Chr4:50606475-50606494	None:intergenic	45.0%
	ATCGGTCGATACCTGAAGAA+AGG	-	Chr4:50606418-50606437	MsG0480020921.01.T01:CDS	45.0%
	GAGCGTATCTTCCTTTCTTC+AGG	+	Chr4:50606432-50606451	None:intergenic	45.0%
	GTTAGGAACGATGAAGAGCT+TGG	-	Chr4:50606589-50606608	MsG0480020921.01.T01:CDS	45.0%
	TGCTGCTGAAGTTCTTGAGT+TGG	-	Chr4:50606504-50606523	MsG0480020921.01.T01:CDS	45.0%
!	AAATTGAAGACCGGCTCTGA+TGG	+	Chr4:50606386-50606405	None:intergenic	45.0%
!	TATCGACCGATTCTTCCAAC+TGG	+	Chr4:50606409-50606428	None:intergenic	45.0%
!!	TCTGGTGTCACAATTGCTCA+TGG	-	Chr4:50606622-50606641	MsG0480020921.01.T01:CDS	45.0%
	ACAGCCAACAACACATGCCT+TGG	+	Chr4:50606571-50606590	None:intergenic	50.0%
	GCCGGTCTTCAATTTCCAGT+TGG	-	Chr4:50606391-50606410	MsG0480020921.01.T01:CDS	50.0%
	GGAGACTTTCCAGCCTTCTT+TGG	+	Chr4:50606721-50606740	None:intergenic	50.0%
	GGCTGGAAAGTCTCCAAAGA+AGG	-	Chr4:50606726-50606745	MsG0480020921.01.T01:CDS	50.0%
	GTGACAAGATCCATCAGAGC+CGG	-	Chr4:50606373-50606392	MsG0480020921.01.T01:CDS	50.0%
	TGGAGGACCAAGGAAGAAGT+CGG	-	Chr4:50606351-50606370	MsG0480020921.01.T01:CDS	50.0%
!	GGCATGTGTTGTTGGCTGTT+AGG	-	Chr4:50606572-50606591	MsG0480020921.01.T01:CDS	50.0%
!	GGTGTCACAATTGCTCATGG+TGG	-	Chr4:50606625-50606644	MsG0480020921.01.T01:CDS	50.0%
!!	CTTGTCACCGACTTCTTCCT+TGG	+	Chr4:50606361-50606380	None:intergenic	50.0%
!!	GCTGAAGTTCTTGAGTTGGC+TGG	-	Chr4:50606508-50606527	MsG0480020921.01.T01:CDS	50.0%
	ACAACAAAGAAGGGAGCCGG+AGG	-	Chr4:50606319-50606338	MsG0480020921.01.T01:CDS	55.0%
	GGAAGATACGCTCAGCGTGT+TGG	-	Chr4:50606439-50606458	MsG0480020921.01.T01:CDS	55.0%
	TACGCTCAGCGTGTTGGAAC+AGG	-	Chr4:50606445-50606464	MsG0480020921.01.T01:CDS	55.0%
	AAGGGAGCCGGAGGAAGGAA+GGG	-	Chr4:50606328-50606347	MsG0480020921.01.T01:CDS	60.0%
	CAAAGAAGGGAGCCGGAGGA+AGG	-	Chr4:50606323-50606342	MsG0480020921.01.T01:CDS	60.0%
	GAAGGAAGGGTGGAGGACCA+AGG	-	Chr4:50606341-50606360	MsG0480020921.01.T01:CDS	60.0%
	TCCTCCACCCTTCCTTCCTC+CGG	+	Chr4:50606338-50606357	None:intergenic	60.0%
	GAAGGGAGCCGGAGGAAGGA+AGG	-	Chr4:50606327-50606346	MsG0480020921.01.T01:CDS	65.0%
	GCCGGAGGAAGGAAGGGTGG+AGG	-	Chr4:50606334-50606353	MsG0480020921.01.T01:CDS	70.0%
	GGAGCCGGAGGAAGGAAGGG+TGG	-	Chr4:50606331-50606350	MsG0480020921.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	50606301	50606753	50606301	ID=MsG0480020921.01;Name=MsG0480020921.01
Chr4	mRNA	50606301	50606753	50606301	ID=MsG0480020921.01.T01;Parent=MsG0480020921.01;Name=MsG0480020921.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|150
Chr4	exon	50606301	50606753	50606301	ID=MsG0480020921.01.T01:exon:326;Parent=MsG0480020921.01.T01
Chr4	CDS	50606301	50606753	50606301	ID=MsG0480020921.01.T01:cds;Parent=MsG0480020921.01.T01

Gene Sequence

>MsG0480020921.01.T01

ATGGACGCAAGCACGAAGACAACAAAGAAGGGAGCCGGAGGAAGGAAGGGTGGAGGACCAAGGAAGAAGTCGGTGACAAGATCCATCAGAGCCGGTCTTCAATTTCCAGTTGGAAGAATCGGTCGATACCTGAAGAAAGGAAGATACGCTCAGCGTGTTGGAACAGGTGCACCAGTATACCTAGCAGCAGTTCTTGAATATCTTGCTGCTGAAGTTCTTGAGTTGGCTGGAAATGCAGCTCGTGATAACAAGAAGAATAGAATTATTCCAAGGCATGTGTTGTTGGCTGTTAGGAACGATGAAGAGCTTGGTAAATTACTTTCTGGTGTCACAATTGCTCATGGTGGTGTTCTTCCAAACATTAACCCTATCCTCTTGCCTAAGAAGAATGAAAAAGCTGCTCCAGCTAACAAAGAGCCAAAGAAGGCTGGAAAGTCTCCAAAGAAGGCTTAG

Protein sequence

>MsG0480020921.01.T01

MDASTKTTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPILLPKKNEKAAPANKEPKKAGKSPKKA*