AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040671.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040671.01.T01 MTR_7g095500 96.667 330 6 1 34 363 1 325 0.0 634
MsG0780040671.01.T01 MTR_7g095500 82.979 47 8 0 374 420 542 588 1.58e-15 79.3
MsG0780040671.01.T01 MTR_1g071450 77.134 328 63 8 34 352 1 325 1.30e-123 369
MsG0780040671.01.T01 MTR_1g041395 61.981 313 99 7 51 354 11 312 5.94e-70 229
MsG0780040671.01.T01 MTR_1g041395 61.199 317 101 7 51 354 11 318 1.17e-69 229
MsG0780040671.01.T01 MTR_1g041395 61.981 313 98 7 51 354 11 311 1.49e-69 229
MsG0780040671.01.T01 MTR_1g102980 58.095 315 109 7 41 354 10 302 1.92e-63 212
MsG0780040671.01.T01 MTR_1g041395 77.622 143 32 0 212 354 39 181 5.95e-33 127
MsG0780040671.01.T01 MTR_1g102980 65.714 175 55 1 180 354 8 177 3.82e-31 122
MsG0780040671.01.T01 MTR_3g110182 34.615 338 151 7 26 359 4 275 1.65e-28 116
MsG0780040671.01.T01 MTR_3g110182 34.615 338 151 7 26 359 6 277 4.02e-28 115
MsG0780040671.01.T01 MTR_7g095630 43.316 187 45 4 107 293 74 199 9.50e-27 107
MsG0780040671.01.T01 MTR_4g039910 54.676 139 60 2 212 349 100 236 6.28e-25 105
MsG0780040671.01.T01 MTR_5g012870 41.722 151 70 2 213 354 113 254 1.54e-20 93.6
MsG0780040671.01.T01 MTR_4g129510 48.227 141 65 2 213 351 118 252 2.09e-11 65.1
MsG0780040671.01.T01 MTR_4g129510 48.227 141 65 2 213 351 118 252 5.08e-11 64.7
MsG0780040671.01.T01 MTR_4g129510 48.227 141 65 3 213 351 87 221 6.50e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040671.01.T01 AT3G63300 66.269 335 88 9 36 353 10 336 1.34e-92 289
MsG0780040671.01.T01 AT4G14740 58.491 318 99 7 53 354 18 318 1.79e-91 283
MsG0780040671.01.T01 AT3G22810 59.177 316 116 8 53 363 18 325 6.25e-91 282
MsG0780040671.01.T01 AT4G14740 58.491 318 99 7 53 354 18 318 2.16e-90 283
MsG0780040671.01.T01 AT4G14740 58.491 318 99 7 53 354 18 318 2.16e-90 283
MsG0780040671.01.T01 AT3G22810 59.177 316 116 8 53 363 18 325 4.12e-90 282
MsG0780040671.01.T01 AT5G43870 58.710 310 95 10 53 353 22 307 6.02e-72 232
MsG0780040671.01.T01 AT5G43870 58.710 310 95 10 53 353 22 307 3.62e-71 232
MsG0780040671.01.T01 AT3G22810 64.021 189 58 4 181 363 3 187 3.03e-53 182
MsG0780040671.01.T01 AT4G14740 65.730 178 56 2 181 354 3 179 5.03e-53 181
MsG0780040671.01.T01 AT3G63300 47.945 292 116 7 180 444 1 283 4.40e-36 136
MsG0780040671.01.T01 AT4G16670 41.611 149 72 3 213 352 132 274 5.13e-17 82.8
MsG0780040671.01.T01 AT4G16670 41.611 149 72 3 213 352 132 274 9.67e-17 82.0
MsG0780040671.01.T01 AT4G16670 41.611 149 72 3 213 352 132 274 1.13e-16 82.4
MsG0780040671.01.T01 AT4G17350 36.257 171 93 3 213 373 115 279 1.68e-16 81.6
MsG0780040671.01.T01 AT5G57770 44.366 142 74 2 213 351 128 267 7.86e-15 75.9
MsG0780040671.01.T01 AT5G57770 44.366 142 74 2 213 351 128 267 2.97e-14 74.7
MsG0780040671.01.T01 AT5G47440 35.762 151 91 2 224 373 134 279 3.90e-13 71.2

Find 103 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATATTGTCACCTTAAT+AGG 0.189852 7:-80916779 None:intergenic
AACGGTGGCGGTTCTTTAAC+TGG 0.219424 7:+80918446 MsG0780040671.01.T01:CDS
AATTAACACCTTCAGTTGTT+TGG 0.253871 7:-80921239 None:intergenic
CTCTTCCACCATTGAATAAT+GGG 0.255578 7:-80918643 None:intergenic
GCTCTTCCACCATTGAATAA+TGG 0.258525 7:-80918644 None:intergenic
AATTCATCTGAATGAGAAAT+TGG 0.282397 7:-80918479 None:intergenic
GCGTTATTATCCGACGGTTT+TGG 0.306770 7:-80921079 None:intergenic
CTGCCACTCGGAACCGATTC+AGG 0.307254 7:-80918000 None:intergenic
CTAGAGCTGTGAAGGACTTA+TGG 0.308647 7:+80919561 MsG0780040671.01.T01:CDS
GGCAATGGCACGGCTTGTTC+AGG 0.312483 7:+80918680 MsG0780040671.01.T01:CDS
GAGTGGTTAGTGGTTTCTTC+AGG 0.337132 7:-80918168 None:intergenic
GATAATCTACCTGACGTTAA+TGG 0.341993 7:-80918404 None:intergenic
ACTCACATGGAAGCCTATTA+AGG 0.365488 7:+80916766 MsG0780040671.01.T01:CDS
ATGGGAGGTATACCAATATC+TGG 0.367567 7:+80919617 MsG0780040671.01.T01:CDS
TTGATTGGTTCCATGTTAGC+TGG 0.378751 7:-80917967 None:intergenic
TTCGATGGACCTGGATCATA+TGG 0.389234 7:-80921145 None:intergenic
TCCATTCACCCATTATTCAA+TGG 0.432610 7:+80918635 MsG0780040671.01.T01:CDS
GACAGACGTGGCTGTTGCTT+CGG 0.436071 7:+80918883 MsG0780040671.01.T01:CDS
CAATTGTCTGCGTCCTGAAT+CGG 0.446737 7:+80917987 MsG0780040671.01.T01:CDS
TCTTCATGCATGCCTTCAAA+TGG 0.464517 7:+80918138 MsG0780040671.01.T01:CDS
TTCAGATAAAGAGTGGTTAG+TGG 0.466917 7:-80918178 None:intergenic
CTAGCTCACCCCAGCTAACA+TGG 0.468628 7:+80917957 MsG0780040671.01.T01:intron
CCAAATTACTTACTTTGGCC+AGG 0.469168 7:-80916817 None:intergenic
TCAGGACGCAGACAATTGAT+TGG 0.473398 7:-80917982 None:intergenic
GGCAGAGGGGTGCTGCCACT+CGG 0.474082 7:-80918012 None:intergenic
ACCATTGAATAATGGGTGAA+TGG 0.477885 7:-80918636 None:intergenic
CCTCCCATTCCTTTCTCCAA+TGG 0.478119 7:-80919602 None:intergenic
GGAGAGTCCTCGAGTTCCTA+TGG 0.478365 7:+80918035 MsG0780040671.01.T01:CDS
AGCAACAGCCACGTCTGTCT+TGG 0.481577 7:-80918879 None:intergenic
GGTATACCAATATCTGGAAA+AGG 0.489627 7:+80919623 MsG0780040671.01.T01:CDS
GAGTGGCAGCACCCCTCTGC+CGG 0.491471 7:+80918014 MsG0780040671.01.T01:CDS
CTTTCAGTGTTGCTGCTCCT+CGG 0.496117 7:-80919538 None:intergenic
ACTCGAGGACTCTCCGGCAG+AGG 0.496378 7:-80918027 None:intergenic
CTCGAGGACTCTCCGGCAGA+GGG 0.502516 7:-80918026 None:intergenic
TGATTGGTTCCATGTTAGCT+GGG 0.502979 7:-80917966 None:intergenic
ATAGGAACTCGAGGACTCTC+CGG 0.511006 7:-80918033 None:intergenic
TTCCATGTGAGTCTCAAGGC+TGG 0.512149 7:-80916755 None:intergenic
TCAGGAATAGAACCATTTGA+AGG 0.517205 7:-80918150 None:intergenic
TGGAATTTCTGTCAAGGTCA+TGG 0.519995 7:+80918055 MsG0780040671.01.T01:CDS
TACTGAGTCCAAACAACTGA+AGG 0.523417 7:+80921231 MsG0780040671.01.T01:CDS
CTTACTGCTGCAGCTGCCAC+AGG 0.532447 7:+80919028 MsG0780040671.01.T01:CDS
ACAAAACAAGGATGAGAAGA+TGG 0.533868 7:+80918856 MsG0780040671.01.T01:CDS
AGCGAACCTTTGAACGGTGG+CGG 0.538212 7:+80918434 MsG0780040671.01.T01:CDS
ACACCATTGGAGAAAGGAAT+GGG 0.539484 7:+80919599 MsG0780040671.01.T01:CDS
ATTTGCTGTTGCCGCCGCGA+TGG 0.542104 7:-80918825 None:intergenic
TGGTGGTAGTGGCTGTGGAA+TGG 0.546348 7:-80921059 None:intergenic
ATCAGAGATTTCGATGGACC+TGG 0.551970 7:-80921154 None:intergenic
GCAGTAACACCATTGGAGAA+AGG 0.553514 7:+80919593 MsG0780040671.01.T01:CDS
AACACCATTGGAGAAAGGAA+TGG 0.555483 7:+80919598 MsG0780040671.01.T01:CDS
ATCACTGAACCATATGATCC+AGG 0.557945 7:+80921136 MsG0780040671.01.T01:CDS
AAAGAACCGCCACCGTTCAA+AGG 0.558652 7:-80918440 None:intergenic
GACGAGCTGCGAAGTAGCAG+AGG 0.558780 7:-80918241 None:intergenic
TGAATTTGACGATGTTGTCA+AGG 0.561851 7:+80918496 MsG0780040671.01.T01:CDS
TTTACAACATTCTCTAAACC+TGG 0.567830 7:+80916799 MsG0780040671.01.T01:CDS
GCGCGACCACCTTGCATCGG+TGG 0.573326 7:+80918961 MsG0780040671.01.T01:CDS
TGTGGAGGCTGCTGAAGCAA+TGG 0.573897 7:+80918931 MsG0780040671.01.T01:CDS
GAAGTGTCGCCATTAACGTC+AGG 0.575049 7:+80918395 MsG0780040671.01.T01:CDS
CTGAGCTGACCACCGATGCA+AGG 0.581486 7:-80918970 None:intergenic
TATGTCACACTCTGCTAGAG+AGG 0.585361 7:+80918275 MsG0780040671.01.T01:CDS
ACTGAAAGCTAGAGCTGTGA+AGG 0.590453 7:+80919553 MsG0780040671.01.T01:CDS
TGGTGCTGCAGTAACACCAT+TGG 0.591757 7:+80919586 MsG0780040671.01.T01:CDS
GTGGAGGCTGCTGAAGCAAT+GGG 0.591770 7:+80918932 MsG0780040671.01.T01:CDS
TGCTATAGCTGCCATCGCGG+CGG 0.598800 7:+80918814 MsG0780040671.01.T01:CDS
TTCCTATGGAATTTCTGTCA+AGG 0.602611 7:+80918049 MsG0780040671.01.T01:CDS
GCAAATGCTGGTGTTGGCAA+TGG 0.603762 7:+80918665 MsG0780040671.01.T01:CDS
TGAGCGCGACCACCTTGCAT+CGG 0.609517 7:+80918958 MsG0780040671.01.T01:CDS
AGTGTGACATAATGCGCTCA+AGG 0.610828 7:-80918263 None:intergenic
ATTCACCCATTATTCAATGG+TGG 0.611363 7:+80918638 MsG0780040671.01.T01:CDS
TCTAGTTGCTGCACAATGTG+TGG 0.616322 7:+80918913 MsG0780040671.01.T01:CDS
TGTTCAGGACCTAAAACTGT+AGG 0.617678 7:+80918695 MsG0780040671.01.T01:CDS
GGAAGAGCAAATGCTGGTGT+TGG 0.620253 7:+80918659 MsG0780040671.01.T01:CDS
AAATTCATCAACACAAAACA+AGG 0.621432 7:+80918844 MsG0780040671.01.T01:CDS
AGGCTTCCATGTGAGTCTCA+AGG 0.624832 7:-80916759 None:intergenic
TGCTGGTGTTGGCAATGGCA+CGG 0.627563 7:+80918670 MsG0780040671.01.T01:CDS
AGAGATCTTCAGATAAAGAG+TGG 0.631675 7:-80918185 None:intergenic
CACAGCAGCGAACCTTTGAA+CGG 0.633000 7:+80918428 MsG0780040671.01.T01:CDS
GCCACTACCACCAAAACCGT+CGG 0.635853 7:+80921069 MsG0780040671.01.T01:CDS
AGTTGCTGCACAATGTGTGG+AGG 0.636318 7:+80918916 MsG0780040671.01.T01:CDS
GAAGGCATGCATGAAGAATG+AGG 0.646788 7:-80918132 None:intergenic
ACATTGTGCAGCAACTAGAG+TGG 0.648949 7:-80918909 None:intergenic
TAGTGATCGATAACGACACA+AGG 0.654030 7:-80921114 None:intergenic
ATAGTGATCAGAGATTTCGA+TGG 0.656718 7:-80921160 None:intergenic
AGAAATTCCATAGGAACTCG+AGG 0.657611 7:-80918042 None:intergenic
AATGGTGGAAGAGCAAATGC+TGG 0.658370 7:+80918653 MsG0780040671.01.T01:CDS
TTCTGCTATAGCTGCCATCG+CGG 0.658786 7:+80918811 MsG0780040671.01.T01:CDS
AACCAGCCTTGAGACTCACA+TGG 0.659099 7:+80916753 MsG0780040671.01.T01:CDS
TTAGATGCGTTATTATCCGA+CGG 0.662367 7:-80921085 None:intergenic
TGAGGTGGTTGAGAATGAGC+TGG 0.666197 7:-80918114 None:intergenic
GACCTAAAACTGTAGGAAGG+TGG 0.671239 7:+80918702 MsG0780040671.01.T01:CDS
GACCTTGACAGAAATTCCAT+AGG 0.674441 7:-80918051 None:intergenic
CCTTGATATGTAGCTCTCCG+AGG 0.677249 7:+80919521 MsG0780040671.01.T01:intron
CAGGACCTAAAACTGTAGGA+AGG 0.679190 7:+80918699 MsG0780040671.01.T01:CDS
GAAGATGGCCAAGACAGACG+TGG 0.685054 7:+80918871 MsG0780040671.01.T01:CDS
CGTCCTGAATCGGTTCCGAG+TGG 0.686606 7:+80917997 MsG0780040671.01.T01:CDS
CCATTGGAGAAAGGAATGGG+AGG 0.688222 7:+80919602 MsG0780040671.01.T01:CDS
TCGAGGACTCTCCGGCAGAG+GGG 0.689304 7:-80918025 None:intergenic
AGCTGACCACCGATGCAAGG+TGG 0.692885 7:-80918967 None:intergenic
AGCAGCGAACCTTTGAACGG+TGG 0.695192 7:+80918431 MsG0780040671.01.T01:CDS
GATTGGTTCCATGTTAGCTG+GGG 0.696974 7:-80917965 None:intergenic
GCTGTGAAGGACTTATGGAA+TGG 0.718299 7:+80919566 MsG0780040671.01.T01:CDS
GCTGCACGCTACAATTACTG+TGG 0.727804 7:+80918778 MsG0780040671.01.T01:CDS
AGTGATCGATAACGACACAA+GGG 0.740645 7:-80921113 None:intergenic
GGCATGCATGAAGAATGAGG+TGG 0.810503 7:-80918129 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATTATATATGTAAC+AGG + Chr7:80918373-80918392 MsG0780040671.01.T01:intron 10.0%
!!! AATACTTATAACTAAATTTT+AGG + Chr7:80917293-80917312 MsG0780040671.01.T01:intron 10.0%
!!! ATACTTATAACTAAATTTTA+GGG + Chr7:80917294-80917313 MsG0780040671.01.T01:intron 10.0%
!!! AAAACAATTAAATTCTGTTT+TGG + Chr7:80919839-80919858 MsG0780040671.01.T01:intron 15.0%
!! AAAAATGTGAAAAAAGCAAA+AGG - Chr7:80917535-80917554 None:intergenic 20.0%
!! AAATATATTGTCACCTTAAT+AGG - Chr7:80916782-80916801 None:intergenic 20.0%
!! ATAATTATGAACAAGACAAA+AGG - Chr7:80916861-80916880 None:intergenic 20.0%
!! CATAATATATGTAAAGTTTG+GGG + Chr7:80917147-80917166 MsG0780040671.01.T01:intron 20.0%
!! GCATAATATATGTAAAGTTT+GGG + Chr7:80917146-80917165 MsG0780040671.01.T01:intron 20.0%
!! GCATCTAGAAATTTAAAAAA+GGG + Chr7:80917658-80917677 MsG0780040671.01.T01:intron 20.0%
!! GCATCTATTTCATAATATAA+TGG + Chr7:80919076-80919095 MsG0780040671.01.T01:intron 20.0%
!! TATTAAGACTACAAAATTTC+TGG + Chr7:80919811-80919830 MsG0780040671.01.T01:intron 20.0%
!! TGCATCTAGAAATTTAAAAA+AGG + Chr7:80917657-80917676 MsG0780040671.01.T01:intron 20.0%
!! TTAAAAAAGGGTTTACATTT+AGG + Chr7:80917670-80917689 MsG0780040671.01.T01:intron 20.0%
!! TTAATAGCATAATCTGTAAT+TGG - Chr7:80919797-80919816 None:intergenic 20.0%
!! TTAATATATGTGAATGCATT+GGG - Chr7:80917031-80917050 None:intergenic 20.0%
!! TTGTAATATCTATATACCAA+AGG - Chr7:80920554-80920573 None:intergenic 20.0%
!! TTTAATATATGTGAATGCAT+TGG - Chr7:80917032-80917051 None:intergenic 20.0%
!!! AATAGTCTTAGACATTTTAA+TGG - Chr7:80919280-80919299 None:intergenic 20.0%
!!! ACATTTTAATGGTTTATTGT+AGG - Chr7:80919269-80919288 None:intergenic 20.0%
!!! AGTTCTATATTTTTACTATG+TGG + Chr7:80918563-80918582 MsG0780040671.01.T01:intron 20.0%
!!! ATAAAGTGTTGAATCAAATT+TGG - Chr7:80920386-80920405 None:intergenic 20.0%
!!! ATTTAATTAGCGATTTTGTA+TGG - Chr7:80919372-80919391 None:intergenic 20.0%
!!! GTACAAATTTTTAGTCAAAT+AGG + Chr7:80917692-80917711 MsG0780040671.01.T01:intron 20.0%
!!! TTTTAAAATGAACTCATACT+TGG + Chr7:80920656-80920675 MsG0780040671.01.T01:intron 20.0%
! AAAAGCCAAATTACTTACTT+TGG - Chr7:80916825-80916844 None:intergenic 25.0%
! AAAATGCGAAAAGTAATTAC+GGG + Chr7:80920604-80920623 MsG0780040671.01.T01:intron 25.0%
! AAATTCATCAACACAAAACA+AGG + Chr7:80918844-80918863 MsG0780040671.01.T01:CDS 25.0%
! AATCTTTACCTACTTTGAAT+TGG - Chr7:80917091-80917110 None:intergenic 25.0%
! AATTCATCTGAATGAGAAAT+TGG - Chr7:80918482-80918501 None:intergenic 25.0%
! AGCAAAAGGAGTTTATATAT+AGG - Chr7:80917521-80917540 None:intergenic 25.0%
! AGTAGGTAAATATATAGTAC+TGG - Chr7:80917878-80917897 None:intergenic 25.0%
! ATATGAATCGTTAAAGTCTA+CGG + Chr7:80920757-80920776 MsG0780040671.01.T01:intron 25.0%
! ATCAAAGAGAATATGATATC+TGG + Chr7:80920271-80920290 MsG0780040671.01.T01:intron 25.0%
! ATCACAATTCTTGATATTAC+AGG + Chr7:80919175-80919194 MsG0780040671.01.T01:intron 25.0%
! ATCTTTACCTACTTTGAATT+GGG - Chr7:80917090-80917109 None:intergenic 25.0%
! CAAAATGCGAAAAGTAATTA+CGG + Chr7:80920603-80920622 MsG0780040671.01.T01:intron 25.0%
! CAAATAGGTGTTTACATATA+GGG + Chr7:80917707-80917726 MsG0780040671.01.T01:intron 25.0%
! CAGTTTATGTAATGTGTATA+TGG + Chr7:80919497-80919516 MsG0780040671.01.T01:intron 25.0%
! CGCATAATATATGTAAAGTT+TGG + Chr7:80917145-80917164 MsG0780040671.01.T01:intron 25.0%
! CTGTATTTAACTAAATTCTC+TGG - Chr7:80919145-80919164 None:intergenic 25.0%
! GCAAAAGGAGTTTATATATA+GGG - Chr7:80917520-80917539 None:intergenic 25.0%
! TAAAAAGAAAATTAGGGCAA+GGG + Chr7:80917056-80917075 MsG0780040671.01.T01:intron 25.0%
! TATACTATGTCGTAAGATTA+TGG - Chr7:80917394-80917413 None:intergenic 25.0%
! TCAAATAGGTGTTTACATAT+AGG + Chr7:80917706-80917725 MsG0780040671.01.T01:intron 25.0%
! TTAAAAAGAAAATTAGGGCA+AGG + Chr7:80917055-80917074 MsG0780040671.01.T01:intron 25.0%
! TTACATAAACTGCGAATATA+AGG - Chr7:80919489-80919508 None:intergenic 25.0%
! TTTAACACACATAGAAACAA+AGG - Chr7:80917618-80917637 None:intergenic 25.0%
!! AGTATAATTGATTCATGGAA+TGG - Chr7:80917489-80917508 None:intergenic 25.0%
!! ATAAGTATTTTACAACTGAG+TGG - Chr7:80917282-80917301 None:intergenic 25.0%
!! ATAATGATAATGTACCGTTA+CGG - Chr7:80919772-80919791 None:intergenic 25.0%
!! ATTGACAACTATTCAAGTTA+CGG - Chr7:80920475-80920494 None:intergenic 25.0%
!! TAATTTTGCATGTTGATGTT+TGG - Chr7:80917427-80917446 None:intergenic 25.0%
!! TTATTACCTTTTCCAGATAT+TGG - Chr7:80919632-80919651 None:intergenic 25.0%
!!! TAAATATATAGTACTGGTCT+TGG - Chr7:80917872-80917891 None:intergenic 25.0%
!!! TCTTTACCTACTTTTTTTTG+TGG - Chr7:80917188-80917207 None:intergenic 25.0%
!!! TGTTAATTTTGAGAATCGAA+TGG + Chr7:80921254-80921273 MsG0780040671.01.T01:CDS 25.0%
AAATAGATGCTCAATGATGT+GGG - Chr7:80919066-80919085 None:intergenic 30.0%
AAGAAAACGTATTTACCACA+TGG + Chr7:80917778-80917797 MsG0780040671.01.T01:intron 30.0%
AAGGAGTTTATATATAGGGA+CGG - Chr7:80917516-80917535 None:intergenic 30.0%
AATATGATATCTGGACTCAA+GGG + Chr7:80920280-80920299 MsG0780040671.01.T01:intron 30.0%
AATTAACACCTTCAGTTGTT+TGG - Chr7:80921242-80921261 None:intergenic 30.0%
ACTTGGAGACAATTATTACA+TGG + Chr7:80920673-80920692 MsG0780040671.01.T01:intron 30.0%
AGACAAAAGGTAATGAATTG+CGG - Chr7:80916848-80916867 None:intergenic 30.0%
AGACATTTAGATTATGCTCT+TGG + Chr7:80919311-80919330 MsG0780040671.01.T01:intron 30.0%
AGATCAAGAAAAGAATCTAG+TGG - Chr7:80916953-80916972 None:intergenic 30.0%
ATGAGATGATGTTGAAGTAT+AGG - Chr7:80917841-80917860 None:intergenic 30.0%
CATAGAAACAAAGGACAATT+TGG - Chr7:80917609-80917628 None:intergenic 30.0%
CCACACAAAAATAACATATC+CGG + Chr7:80920865-80920884 MsG0780040671.01.T01:intron 30.0%
GCATAATCTAAATGTCTTAG+TGG - Chr7:80919308-80919327 None:intergenic 30.0%
TATATTTACCTACTCCTTCA+TGG + Chr7:80917884-80917903 MsG0780040671.01.T01:intron 30.0%
TCTATGTGTTAGTGTGTATA+TGG + Chr7:80916901-80916920 MsG0780040671.01.T01:intron 30.0%
TCTTTACCTACTTTGAATTG+GGG - Chr7:80917089-80917108 None:intergenic 30.0%
TGAAGTATAGGCTAACTAAA+GGG - Chr7:80917829-80917848 None:intergenic 30.0%
TGATTCACATGACAATCTTA+GGG - Chr7:80916996-80917015 None:intergenic 30.0%
TGTTAGTGTGTATATGGTTT+GGG + Chr7:80916907-80916926 MsG0780040671.01.T01:intron 30.0%
TTATTTAGTGAGATGTGACT+TGG - Chr7:80917340-80917359 None:intergenic 30.0%
TTGAAGTATAGGCTAACTAA+AGG - Chr7:80917830-80917849 None:intergenic 30.0%
TTGAATGTTAAGTTAGAGAG+AGG - Chr7:80917919-80917938 None:intergenic 30.0%
TTTAACGATTCATATGATCC+AGG - Chr7:80920752-80920771 None:intergenic 30.0%
TTTACAACATTCTCTAAACC+TGG + Chr7:80916799-80916818 MsG0780040671.01.T01:CDS 30.0%
! AACTCGTAACCAAATTTTAG+TGG + Chr7:80917461-80917480 MsG0780040671.01.T01:intron 30.0%
! AATTAGCGATTTTGTATGGT+TGG - Chr7:80919368-80919387 None:intergenic 30.0%
! ACTTGGTTGTTATTGATGTT+CGG - Chr7:80917323-80917342 None:intergenic 30.0%
! CACTTAACTTTAGTTTCACA+AGG + Chr7:80919408-80919427 MsG0780040671.01.T01:intron 30.0%
! TAATGATAATGTACCGTTAC+GGG - Chr7:80919771-80919790 None:intergenic 30.0%
!! ACTCGTAACCAAATTTTAGT+GGG + Chr7:80917462-80917481 MsG0780040671.01.T01:intron 30.0%
!! CGTAATTACTTTTCGCATTT+TGG - Chr7:80920605-80920624 None:intergenic 30.0%
!! TGTAAAAACTCTGAAACCAT+TGG + Chr7:80920985-80921004 MsG0780040671.01.T01:intron 30.0%
!!! ACAATTTTTTTTACCAGCAC+AGG + Chr7:80920081-80920100 MsG0780040671.01.T01:intron 30.0%
!!! CAATGTATGTGCAGTTTTTT+CGG + Chr7:80918603-80918622 MsG0780040671.01.T01:intron 30.0%
!!! TACTTTTTTTTGTGGTGTCT+GGG - Chr7:80917180-80917199 None:intergenic 30.0%
AAAACTGCACATACATTGAC+AGG - Chr7:80918601-80918620 None:intergenic 35.0%
ACAAAACAAGGATGAGAAGA+TGG + Chr7:80918856-80918875 MsG0780040671.01.T01:CDS 35.0%
ACAAAATCGTCAAGTGTAGA+AGG - Chr7:80920788-80920807 None:intergenic 35.0%
ACTAACATCCAATTCATAGG+TGG + Chr7:80921031-80921050 MsG0780040671.01.T01:intron 35.0%
ACTAGCAATAACAGAATGAG+AGG - Chr7:80920361-80920380 None:intergenic 35.0%
AGAGATCTTCAGATAAAGAG+TGG - Chr7:80918188-80918207 None:intergenic 35.0%
AGTTTATATATAGGGACGGA+GGG - Chr7:80917512-80917531 None:intergenic 35.0%
ATAGTGATCAGAGATTTCGA+TGG - Chr7:80921163-80921182 None:intergenic 35.0%
ATATGATATCTGGACTCAAG+GGG + Chr7:80920281-80920300 MsG0780040671.01.T01:intron 35.0%
ATTCACCCATTATTCAATGG+TGG + Chr7:80918638-80918657 MsG0780040671.01.T01:CDS 35.0%
CACTCTTTCACTATTTCCTT+TGG + Chr7:80920535-80920554 MsG0780040671.01.T01:intron 35.0%
CAGACACCACAAAAAAAAGT+AGG + Chr7:80917179-80917198 MsG0780040671.01.T01:intron 35.0%
CTAACTAAAGGGCTTATGAA+TGG - Chr7:80917818-80917837 None:intergenic 35.0%
CTCTTCCACCATTGAATAAT+GGG - Chr7:80918646-80918665 None:intergenic 35.0%
CTGATTCACATGACAATCTT+AGG - Chr7:80916997-80917016 None:intergenic 35.0%
GAAATAGATGCTCAATGATG+TGG - Chr7:80919067-80919086 None:intergenic 35.0%
GAATATGATATCTGGACTCA+AGG + Chr7:80920279-80920298 MsG0780040671.01.T01:intron 35.0%
GAGATACAATGGAAATCCAA+TGG - Chr7:80921004-80921023 None:intergenic 35.0%
GATAATCTACCTGACGTTAA+TGG - Chr7:80918407-80918426 None:intergenic 35.0%
GCAACTAACATCCAATTCAT+AGG + Chr7:80921028-80921047 MsG0780040671.01.T01:intron 35.0%
GGAATCAATGTTTCATATCG+CGG + Chr7:80919097-80919116 MsG0780040671.01.T01:intron 35.0%
GGTATACCAATATCTGGAAA+AGG + Chr7:80919623-80919642 MsG0780040671.01.T01:CDS 35.0%
GTGTTAGTGTGTATATGGTT+TGG + Chr7:80916906-80916925 MsG0780040671.01.T01:intron 35.0%
TACCAATTGAACTAAGCTCA+CGG - Chr7:80917118-80917137 None:intergenic 35.0%
TAGTTGCTTCAGAGATACAA+TGG - Chr7:80921015-80921034 None:intergenic 35.0%
TCAGGAATAGAACCATTTGA+AGG - Chr7:80918153-80918172 None:intergenic 35.0%
TCCATTCACCCATTATTCAA+TGG + Chr7:80918635-80918654 MsG0780040671.01.T01:CDS 35.0%
TCTGTTTACATACATCGAAC+AGG + Chr7:80919897-80919916 MsG0780040671.01.T01:intron 35.0%
TGAATGTGATTGTGTCTTTG+TGG - Chr7:80918321-80918340 None:intergenic 35.0%
TGAATTTGACGATGTTGTCA+AGG + Chr7:80918496-80918515 MsG0780040671.01.T01:CDS 35.0%
TGAGCTTAGTTCAATTGGTA+AGG + Chr7:80917118-80917137 MsG0780040671.01.T01:intron 35.0%
TTAGATGCGTTATTATCCGA+CGG - Chr7:80921088-80921107 None:intergenic 35.0%
TTAGATTATGCTCTTGGACA+AGG + Chr7:80919317-80919336 MsG0780040671.01.T01:intron 35.0%
TTCAGATAAAGAGTGGTTAG+TGG - Chr7:80918181-80918200 None:intergenic 35.0%
TTCCTATGGAATTTCTGTCA+AGG + Chr7:80918049-80918068 MsG0780040671.01.T01:CDS 35.0%
! AGAGTTTTTACAAATGCTGC+AGG - Chr7:80920977-80920996 None:intergenic 35.0%
! ATGACAATCTTAGGGTACTT+AGG - Chr7:80916988-80917007 None:intergenic 35.0%
! GAGGGAGTATAATTGATTCA+TGG - Chr7:80917494-80917513 None:intergenic 35.0%
! TTTTTACAAATGCTGCAGGT+TGG - Chr7:80920973-80920992 None:intergenic 35.0%
!! ACCATTGAATAATGGGTGAA+TGG - Chr7:80918639-80918658 None:intergenic 35.0%
!! ATTTTGAGAATCGAATGGTC+TGG + Chr7:80921259-80921278 MsG0780040671.01.T01:CDS 35.0%
!!! ACTTTTTTTTGTGGTGTCTG+GGG - Chr7:80917179-80917198 None:intergenic 35.0%
!!! CCGGATATGTTATTTTTGTG+TGG - Chr7:80920868-80920887 None:intergenic 35.0%
!!! CTACTTTTTTTTGTGGTGTC+TGG - Chr7:80917181-80917200 None:intergenic 35.0%
!!! GTGAATGCAGATGGTTTTAT+AGG + Chr7:80919695-80919714 MsG0780040671.01.T01:intron 35.0%
AACACCATTGGAGAAAGGAA+TGG + Chr7:80919598-80919617 MsG0780040671.01.T01:CDS 40.0%
ACAAGGCTTGCAAACATTTC+AGG + Chr7:80919982-80920001 MsG0780040671.01.T01:intron 40.0%
ACACCATTGGAGAAAGGAAT+GGG + Chr7:80919599-80919618 MsG0780040671.01.T01:CDS 40.0%
ACTCACATGGAAGCCTATTA+AGG + Chr7:80916766-80916785 MsG0780040671.01.T01:CDS 40.0%
AGAAATTCCATAGGAACTCG+AGG - Chr7:80918045-80918064 None:intergenic 40.0%
AGTGATCGATAACGACACAA+GGG - Chr7:80921116-80921135 None:intergenic 40.0%
ATAACGCCCCAATTCAAAGT+AGG + Chr7:80917080-80917099 MsG0780040671.01.T01:intron 40.0%
ATCACTGAACCATATGATCC+AGG + Chr7:80921136-80921155 MsG0780040671.01.T01:CDS 40.0%
ATCCGTGAGCTTAGTTCAAT+TGG + Chr7:80917113-80917132 MsG0780040671.01.T01:intron 40.0%
ATGAAGAGCAAACATGTTGC+AGG + Chr7:80920016-80920035 MsG0780040671.01.T01:intron 40.0%
CACAATTTCTCCACTATCAC+TGG - Chr7:80919678-80919697 None:intergenic 40.0%
CCAAATTACTTACTTTGGCC+AGG - Chr7:80916820-80916839 None:intergenic 40.0%
CCTGGCCAAAGTAAGTAATT+TGG + Chr7:80916817-80916836 MsG0780040671.01.T01:intron 40.0%
CTGCATCTGAGTACTTGATA+TGG - Chr7:80920449-80920468 None:intergenic 40.0%
GACCTTGACAGAAATTCCAT+AGG - Chr7:80918054-80918073 None:intergenic 40.0%
GAGTTTATATATAGGGACGG+AGG - Chr7:80917513-80917532 None:intergenic 40.0%
GCTCTTCCACCATTGAATAA+TGG - Chr7:80918647-80918666 None:intergenic 40.0%
GGAAGAGATCTATCAGATGA+TGG + Chr7:80920183-80920202 MsG0780040671.01.T01:intron 40.0%
GGAATGGTCCCACTAAAATT+TGG - Chr7:80917473-80917492 None:intergenic 40.0%
GGAGAAATTGTGAATGCAGA+TGG + Chr7:80919686-80919705 MsG0780040671.01.T01:intron 40.0%
GGTATCAATCAACACTCCAA+GGG + Chr7:80920886-80920905 MsG0780040671.01.T01:intron 40.0%
TACGTGTTCATTCGTTGACA+AGG + Chr7:80919965-80919984 MsG0780040671.01.T01:intron 40.0%
TACTGAGTCCAAACAACTGA+AGG + Chr7:80921231-80921250 MsG0780040671.01.T01:CDS 40.0%
TAGTGATCGATAACGACACA+AGG - Chr7:80921117-80921136 None:intergenic 40.0%
TATGTTTCGATTGCCTCAAG+AGG - Chr7:80919223-80919242 None:intergenic 40.0%
TCATCTGATAGATCTCTTCC+TGG - Chr7:80920183-80920202 None:intergenic 40.0%
TCTTCATGCATGCCTTCAAA+TGG + Chr7:80918138-80918157 MsG0780040671.01.T01:CDS 40.0%
TGGAATTTCTGTCAAGGTCA+TGG + Chr7:80918055-80918074 MsG0780040671.01.T01:CDS 40.0%
TGTTCAGGACCTAAAACTGT+AGG + Chr7:80918695-80918714 MsG0780040671.01.T01:CDS 40.0%
TTTGTGTGGTTGTCATGCTT+TGG - Chr7:80920854-80920873 None:intergenic 40.0%
! AACCACCTTCCTACAGTTTT+AGG - Chr7:80918707-80918726 None:intergenic 40.0%
! AGCCAAGAACTACTTGCTAA+GGG + Chr7:80919725-80919744 MsG0780040671.01.T01:intron 40.0%
! ATGGGAGGTATACCAATATC+TGG + Chr7:80919617-80919636 MsG0780040671.01.T01:CDS 40.0%
! TGATTGGTTCCATGTTAGCT+GGG - Chr7:80917969-80917988 None:intergenic 40.0%
! TGTGTATATGGTTTGGGATG+CGG + Chr7:80916913-80916932 MsG0780040671.01.T01:intron 40.0%
! TTGATTGGTTCCATGTTAGC+TGG - Chr7:80917970-80917989 None:intergenic 40.0%
! TTTTACCAGCACAGGTACAT+AGG + Chr7:80920089-80920108 MsG0780040671.01.T01:intron 40.0%
!! AACCCACACTTGTTTTTCCT+CGG - Chr7:80917734-80917753 None:intergenic 40.0%
!! CTTGGAGTGTTGATTGATAC+CGG - Chr7:80920887-80920906 None:intergenic 40.0%
!! TTATTATCCGACGGTTTTGG+TGG - Chr7:80921079-80921098 None:intergenic 40.0%
!!! TCTGTTTTGGTGATAACTGC+AGG + Chr7:80919852-80919871 MsG0780040671.01.T01:intron 40.0%
AAAACCGTGTCCTTTGAACG+AGG - Chr7:80920917-80920936 None:intergenic 45.0%
AACAACAGCTCCAGTGATAG+TGG + Chr7:80919665-80919684 MsG0780040671.01.T01:intron 45.0%
ACATTGTGCAGCAACTAGAG+TGG - Chr7:80918912-80918931 None:intergenic 45.0%
ACTGAAAGCTAGAGCTGTGA+AGG + Chr7:80919553-80919572 MsG0780040671.01.T01:CDS 45.0%
AGAGGTGACAGAATCCATGA+AGG - Chr7:80917901-80917920 None:intergenic 45.0%
AGTGTGACATAATGCGCTCA+AGG - Chr7:80918266-80918285 None:intergenic 45.0%
ATCAGAGATTTCGATGGACC+TGG - Chr7:80921157-80921176 None:intergenic 45.0%
CAATTGTCTGCGTCCTGAAT+CGG + Chr7:80917987-80918006 MsG0780040671.01.T01:CDS 45.0%
CAGGACCTAAAACTGTAGGA+AGG + Chr7:80918699-80918718 MsG0780040671.01.T01:CDS 45.0%
CGGATTGAAAACAGACTCGA+GGG + Chr7:80920224-80920243 MsG0780040671.01.T01:intron 45.0%
CGGTATCAATCAACACTCCA+AGG + Chr7:80920885-80920904 MsG0780040671.01.T01:intron 45.0%
CGTATTTACCACATGGTTCG+TGG + Chr7:80917785-80917804 MsG0780040671.01.T01:intron 45.0%
CTAGAGCTGTGAAGGACTTA+TGG + Chr7:80919561-80919580 MsG0780040671.01.T01:CDS 45.0%
GACAGAATCCATGAAGGAGT+AGG - Chr7:80917895-80917914 None:intergenic 45.0%
GACCGAGGAAAAACAAGTGT+GGG + Chr7:80917729-80917748 MsG0780040671.01.T01:intron 45.0%
GACCTAAAACTGTAGGAAGG+TGG + Chr7:80918702-80918721 MsG0780040671.01.T01:CDS 45.0%
GAGTGGTTAGTGGTTTCTTC+AGG - Chr7:80918171-80918190 None:intergenic 45.0%
GCAGTAACACCATTGGAGAA+AGG + Chr7:80919593-80919612 MsG0780040671.01.T01:CDS 45.0%
GCTGTGAAGGACTTATGGAA+TGG + Chr7:80919566-80919585 MsG0780040671.01.T01:CDS 45.0%
GGAGAAAAACGACGCTACTT+CGG + Chr7:80920204-80920223 MsG0780040671.01.T01:intron 45.0%
GGATTGAAAACAGACTCGAG+GGG + Chr7:80920225-80920244 MsG0780040671.01.T01:intron 45.0%
GTGTTTACATATAGGGACCG+AGG + Chr7:80917714-80917733 MsG0780040671.01.T01:intron 45.0%
TAACTGCAGGTGATCTACAC+TGG + Chr7:80919865-80919884 MsG0780040671.01.T01:intron 45.0%
TATGACCTATGTACCTGTGC+TGG - Chr7:80920097-80920116 None:intergenic 45.0%
TATGTCACACTCTGCTAGAG+AGG + Chr7:80918275-80918294 MsG0780040671.01.T01:CDS 45.0%
TATTCCGTCTCTGCCATTGT+TGG + Chr7:80920812-80920831 MsG0780040671.01.T01:intron 45.0%
TATTGTGCTAGACGTGTGCA+CGG + Chr7:80920143-80920162 MsG0780040671.01.T01:intron 45.0%
TCAGGACGCAGACAATTGAT+TGG - Chr7:80917985-80918004 None:intergenic 45.0%
TCGGATTGAAAACAGACTCG+AGG + Chr7:80920223-80920242 MsG0780040671.01.T01:intron 45.0%
TCTAGTTGCTGCACAATGTG+TGG + Chr7:80918913-80918932 MsG0780040671.01.T01:CDS 45.0%
TGCCCTTAGCAAGTAGTTCT+TGG - Chr7:80919730-80919749 None:intergenic 45.0%
TTACTCAAACGCACCCGTAA+CGG + Chr7:80919755-80919774 MsG0780040671.01.T01:intron 45.0%
TTCGATGGACCTGGATCATA+TGG - Chr7:80921148-80921167 None:intergenic 45.0%
! AATGGTGGAAGAGCAAATGC+TGG + Chr7:80918653-80918672 MsG0780040671.01.T01:CDS 45.0%
! CAGCCAAGAACTACTTGCTA+AGG + Chr7:80919724-80919743 MsG0780040671.01.T01:intron 45.0%
! GAAGGCATGCATGAAGAATG+AGG - Chr7:80918135-80918154 None:intergenic 45.0%
! GATTGGTTCCATGTTAGCTG+GGG - Chr7:80917968-80917987 None:intergenic 45.0%
! GCGTTATTATCCGACGGTTT+TGG - Chr7:80921082-80921101 None:intergenic 45.0%
! GTGTATATGGTTTGGGATGC+GGG + Chr7:80916914-80916933 MsG0780040671.01.T01:intron 45.0%
! TGGGCTAATAGTCTTACCTG+TGG - Chr7:80919047-80919066 None:intergenic 45.0%
! TTACAAATGCTGCAGGTTGG+TGG - Chr7:80920970-80920989 None:intergenic 45.0%
!! ATAGTACTGGTCTTGGCAGA+AGG - Chr7:80917865-80917884 None:intergenic 45.0%
!! AAATAATTAAAAAGAAAATT+AGG + Chr7:80917049-80917068 MsG0780040671.01.T01:intron 5.0%
!! AATAATTAAAAAGAAAATTA+GGG + Chr7:80917050-80917069 MsG0780040671.01.T01:intron 5.0%
AAAGAACCGCCACCGTTCAA+AGG - Chr7:80918443-80918462 None:intergenic 50.0%
AACCAGCCTTGAGACTCACA+TGG + Chr7:80916753-80916772 MsG0780040671.01.T01:CDS 50.0%
AGCAAGTAGTTCTTGGCTGC+AGG - Chr7:80919723-80919742 None:intergenic 50.0%
AGGCTTCCATGTGAGTCTCA+AGG - Chr7:80916762-80916781 None:intergenic 50.0%
AGTTGCTGCACAATGTGTGG+AGG + Chr7:80918916-80918935 MsG0780040671.01.T01:CDS 50.0%
ATAGGAACTCGAGGACTCTC+CGG - Chr7:80918036-80918055 None:intergenic 50.0%
CACAGCAGCGAACCTTTGAA+CGG + Chr7:80918428-80918447 MsG0780040671.01.T01:CDS 50.0%
CCATTGGAGAAAGGAATGGG+AGG + Chr7:80919602-80919621 MsG0780040671.01.T01:CDS 50.0%
CCTCAAGAGGACTACGATCA+GGG - Chr7:80919210-80919229 None:intergenic 50.0%
CCTCCCATTCCTTTCTCCAA+TGG - Chr7:80919605-80919624 None:intergenic 50.0%
CCTCGGAGAGCTACATATCA+AGG - Chr7:80919524-80919543 None:intergenic 50.0%
CCTTGATATGTAGCTCTCCG+AGG + Chr7:80919521-80919540 MsG0780040671.01.T01:intron 50.0%
CTCAAGAGGACTACGATCAG+GGG - Chr7:80919209-80919228 None:intergenic 50.0%
GCTGCACGCTACAATTACTG+TGG + Chr7:80918778-80918797 MsG0780040671.01.T01:CDS 50.0%
GGAAGAGCAAATGCTGGTGT+TGG + Chr7:80918659-80918678 MsG0780040671.01.T01:CDS 50.0%
GGACCGAGGAAAAACAAGTG+TGG + Chr7:80917728-80917747 MsG0780040671.01.T01:intron 50.0%
GGCATGCATGAAGAATGAGG+TGG - Chr7:80918132-80918151 None:intergenic 50.0%
GTCAATCACCACGAACCATG+TGG - Chr7:80917796-80917815 None:intergenic 50.0%
TCTGGACTCAAGGGGTTTCT+AGG + Chr7:80920289-80920308 MsG0780040671.01.T01:intron 50.0%
TGAGGTGGTTGAGAATGAGC+TGG - Chr7:80918117-80918136 None:intergenic 50.0%
TGGCGAAGCCACCTATGAAT+TGG - Chr7:80921042-80921061 None:intergenic 50.0%
TGTGCACGGATTTACCAGCA+TGG + Chr7:80920157-80920176 MsG0780040671.01.T01:intron 50.0%
TTCCATGTGAGTCTCAAGGC+TGG - Chr7:80916758-80916777 None:intergenic 50.0%
TTCTGCTATAGCTGCCATCG+CGG + Chr7:80918811-80918830 MsG0780040671.01.T01:CDS 50.0%
! AACGGTGGCGGTTCTTTAAC+TGG + Chr7:80918446-80918465 MsG0780040671.01.T01:CDS 50.0%
! CATGCTTTGGACTGAGCAGA+CGG - Chr7:80920841-80920860 None:intergenic 50.0%
! CTTTCAGTGTTGCTGCTCCT+CGG - Chr7:80919541-80919560 None:intergenic 50.0%
!! GAAGTGTCGCCATTAACGTC+AGG + Chr7:80918395-80918414 MsG0780040671.01.T01:CDS 50.0%
!! GCAAATGCTGGTGTTGGCAA+TGG + Chr7:80918665-80918684 MsG0780040671.01.T01:CDS 50.0%
!! TGGTGCTGCAGTAACACCAT+TGG + Chr7:80919586-80919605 MsG0780040671.01.T01:CDS 50.0%
AAGGGTCGAGCCTCGTTCAA+AGG + Chr7:80920904-80920923 MsG0780040671.01.T01:intron 55.0%
ACGGATTTACCAGCATGGCC+AGG + Chr7:80920162-80920181 MsG0780040671.01.T01:intron 55.0%
AGATCTCTTCCTGGCCATGC+TGG - Chr7:80920174-80920193 None:intergenic 55.0%
AGCAACAGCCACGTCTGTCT+TGG - Chr7:80918882-80918901 None:intergenic 55.0%
AGCAGCGAACCTTTGAACGG+TGG + Chr7:80918431-80918450 MsG0780040671.01.T01:CDS 55.0%
AGCGAACCTTTGAACGGTGG+CGG + Chr7:80918434-80918453 MsG0780040671.01.T01:CDS 55.0%
CCCTGATCGTAGTCCTCTTG+AGG + Chr7:80919207-80919226 MsG0780040671.01.T01:intron 55.0%
CGAGCCTCGTTCAAAGGACA+CGG + Chr7:80920910-80920929 MsG0780040671.01.T01:intron 55.0%
CTAGCTCACCCCAGCTAACA+TGG + Chr7:80917957-80917976 MsG0780040671.01.T01:intron 55.0%
GAAGATGGCCAAGACAGACG+TGG + Chr7:80918871-80918890 MsG0780040671.01.T01:CDS 55.0%
GCCACTACCACCAAAACCGT+CGG + Chr7:80921069-80921088 MsG0780040671.01.T01:CDS 55.0%
GCCTCAAGAGGACTACGATC+AGG - Chr7:80919211-80919230 None:intergenic 55.0%
GGAGAGTCCTCGAGTTCCTA+TGG + Chr7:80918035-80918054 MsG0780040671.01.T01:CDS 55.0%
GTCGCCAACAATGGCAGAGA+CGG - Chr7:80920819-80920838 None:intergenic 55.0%
GTGGAGGCTGCTGAAGCAAT+GGG + Chr7:80918932-80918951 MsG0780040671.01.T01:CDS 55.0%
TGTGGAGGCTGCTGAAGCAA+TGG + Chr7:80918931-80918950 MsG0780040671.01.T01:CDS 55.0%
TTTGAACGAGGCTCGACCCT+TGG - Chr7:80920905-80920924 None:intergenic 55.0%
! GACAGACGTGGCTGTTGCTT+CGG + Chr7:80918883-80918902 MsG0780040671.01.T01:CDS 55.0%
!! CAAATGCTGCAGGTTGGTGG+TGG - Chr7:80920967-80920986 None:intergenic 55.0%
!! TCCGACGGTTTTGGTGGTAG+TGG - Chr7:80921073-80921092 None:intergenic 55.0%
!! TGCTGGTGTTGGCAATGGCA+CGG + Chr7:80918670-80918689 MsG0780040671.01.T01:CDS 55.0%
!! TGGTGGTAGTGGCTGTGGAA+TGG - Chr7:80921062-80921081 None:intergenic 55.0%
!!! GGTTTTGGTGGTAGTGGCTG+TGG - Chr7:80921067-80921086 None:intergenic 55.0%
AGCTGACCACCGATGCAAGG+TGG - Chr7:80918970-80918989 None:intergenic 60.0%
CTGAGCTGACCACCGATGCA+AGG - Chr7:80918973-80918992 None:intergenic 60.0%
CTTACTGCTGCAGCTGCCAC+AGG + Chr7:80919028-80919047 MsG0780040671.01.T01:CDS 60.0%
GACGAGCTGCGAAGTAGCAG+AGG - Chr7:80918244-80918263 None:intergenic 60.0%
GAGCAGACGGTCGCCAACAA+TGG - Chr7:80920828-80920847 None:intergenic 60.0%
TGAGCGCGACCACCTTGCAT+CGG + Chr7:80918958-80918977 MsG0780040671.01.T01:CDS 60.0%
TGCTATAGCTGCCATCGCGG+CGG + Chr7:80918814-80918833 MsG0780040671.01.T01:CDS 60.0%
! CGTCCTGAATCGGTTCCGAG+TGG + Chr7:80917997-80918016 MsG0780040671.01.T01:CDS 60.0%
! CTGCCACTCGGAACCGATTC+AGG - Chr7:80918003-80918022 None:intergenic 60.0%
! GGCAATGGCACGGCTTGTTC+AGG + Chr7:80918680-80918699 MsG0780040671.01.T01:CDS 60.0%
!! ATTTGCTGTTGCCGCCGCGA+TGG - Chr7:80918828-80918847 None:intergenic 60.0%
ACTCGAGGACTCTCCGGCAG+AGG - Chr7:80918030-80918049 None:intergenic 65.0%
CTCGAGGACTCTCCGGCAGA+GGG - Chr7:80918029-80918048 None:intergenic 65.0%
TCGAGGACTCTCCGGCAGAG+GGG - Chr7:80918028-80918047 None:intergenic 65.0%
GAGTGGCAGCACCCCTCTGC+CGG + Chr7:80918014-80918033 MsG0780040671.01.T01:CDS 70.0%
GCGCGACCACCTTGCATCGG+TGG + Chr7:80918961-80918980 MsG0780040671.01.T01:CDS 70.0%
!! GGCAGAGGGGTGCTGCCACT+CGG - Chr7:80918015-80918034 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 80916743 80921342 80916743 ID=MsG0780040671.01;Name=MsG0780040671.01
Chr7 mRNA 80916743 80921342 80916743 ID=MsG0780040671.01.T01;Parent=MsG0780040671.01;Name=MsG0780040671.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.66|0.6|0.66|6|0|459
Chr7 exon 80916743 80916826 80916743 ID=MsG0780040671.01.T01:exon:37997;Parent=MsG0780040671.01.T01
Chr7 exon 80917961 80918296 80917961 ID=MsG0780040671.01.T01:exon:37998;Parent=MsG0780040671.01.T01
Chr7 exon 80918395 80918517 80918395 ID=MsG0780040671.01.T01:exon:37999;Parent=MsG0780040671.01.T01
Chr7 exon 80918617 80919049 80918617 ID=MsG0780040671.01.T01:exon:38000;Parent=MsG0780040671.01.T01
Chr7 exon 80919534 80919644 80919534 ID=MsG0780040671.01.T01:exon:38001;Parent=MsG0780040671.01.T01
Chr7 exon 80921050 80921342 80921050 ID=MsG0780040671.01.T01:exon:38002;Parent=MsG0780040671.01.T01
Chr7 CDS 80916743 80916826 80916743 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Chr7 CDS 80917961 80918296 80917961 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Chr7 CDS 80918395 80918517 80918395 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Chr7 CDS 80918617 80919049 80918617 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Chr7 CDS 80919534 80919644 80919534 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Chr7 CDS 80921050 80921342 80921050 ID=MsG0780040671.01.T01:cds;Parent=MsG0780040671.01.T01
Gene Sequence

>MsG0780040671.01.T01

ATGAAATTTAAACCAGCCTTGAGACTCACATGGAAGCCTATTAAGGTGACAATATATTTACAACATTCTCTAAACCTGGCCAAACTCACCCCAGCTAACATGGAACCAATCAATTGTCTGCGTCCTGAATCGGTTCCGAGTGGCAGCACCCCTCTGCCGGAGAGTCCTCGAGTTCCTATGGAATTTCTGTCAAGGTCATGGAGTGCTTCAGCTCTTGAAGTCACAAAAGCTCTTGCACCAGCTCATTCTCAACCACCTCATTCTTCATGCATGCCTTCAAATGGTTCTATTCCTGAAGAAACCACTAACCACTCTTTATCTGAAGATCTCTCTATACAGTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCTACTTCGCAGCTCGTCCTTGAGCGCATTATGTCACACTCTGCTAGAGAGGAAGTGTCGCCATTAACGTCAGGTAGATTATCTCACAGCAGCGAACCTTTGAACGGTGGCGGTTCTTTAACTGGAACAGACAGTCCAATTTCTCATTCAGATGAATTTGACGATGTTGTCAAGTTTTTTCGGACAAACAATTCCATTCACCCATTATTCAATGGTGGAAGAGCAAATGCTGGTGTTGGCAATGGCACGGCTTGTTCAGGACCTAAAACTGTAGGAAGGTGGTTGAAAGAGAGAAGAGAGAAGAAGAAAGAAGAAAGCAGAACACAAAATGCTCAGCTGCACGCTACAATTACTGTGGCTGCTGTTGCTTCTGCTATAGCTGCCATCGCGGCGGCAACAGCAAATTCATCAACACAAAACAAGGATGAGAAGATGGCCAAGACAGACGTGGCTGTTGCTTCGGCTGCCACTCTAGTTGCTGCACAATGTGTGGAGGCTGCTGAAGCAATGGGAGCTGAGCGCGACCACCTTGCATCGGTGGTCAGCTCAGCTGTGAATGTTCGTTGTCATGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTCCGAGGAGCAGCAACACTGAAAGCTAGAGCTGTGAAGGACTTATGGAATGGTGCTGCAGTAACACCATTGGAGAAAGGAATGGGAGGTATACCAATATCTGGAAAAGGTGGCTTCGCCATTCCACAGCCACTACCACCAAAACCGTCGGATAATAACGCATCTAAGTATGCCCTTGTGTCGTTATCGATCACTATCACTGAACCATATGATCCAGGTCCATCGAAATCTCTGATCACTATCACATCTAAGTATCTAGAAGATTACACTGATATTGATCTTTATTTTTTTACTGAGTCCAAACAACTGAAGGTGTTAATTTTGAGAATCGAATGGTCTGGTTTGAAAGTCTTTATAGATCTCAATGTATCATTATTTGATGATGATCTTAGTTATGTTTGA

Protein sequence

>MsG0780040671.01.T01

MKFKPALRLTWKPIKVTIYLQHSLNLAKLTPANMEPINCLRPESVPSGSTPLPESPRVPMEFLSRSWSASALEVTKALAPAHSQPPHSSCMPSNGSIPEETTNHSLSEDLSIQSKNQFSFASSATSQLVLERIMSHSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPISHSDEFDDVVKFFRTNNSIHPLFNGGRANAGVGNGTACSGPKTVGRWLKERREKKKEESRTQNAQLHATITVAAVASAIAAIAAATANSSTQNKDEKMAKTDVAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRCHDDITTLTAAAATALRGAATLKARAVKDLWNGAAVTPLEKGMGGIPISGKGGFAIPQPLPPKPSDNNASKYALVSLSITITEPYDPGPSKSLITITSKYLEDYTDIDLYFFTESKQLKVLILRIEWSGLKVFIDLNVSLFDDDLSYV*