AlfalfaGEDB | MsG0480020926.01

M. sativa cultivar ZhongmuNo.1 / MsG0480020926.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020926.01.T01	XP_013456141.2	95.973	149	3	1	1	149	1	146	1.88E-92	274

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020926.01.T01	Q2HU65	94.737	152	4	3	1	149	1	151	1.09E-93	270

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020926.01.T01	A0A396I838	95.973	149	3	1	1	149	1	146	8.97e-93	274

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0480020926.01	0.824590	7.433206e-54	6.613624e-51
MsG0080048775.01	MsG0480020926.01	0.800112	1.678799e-48	7.752493e-46
MsG0180001293.01	MsG0480020926.01	0.803249	3.815434e-49	1.908009e-46
MsG0180002134.01	MsG0480020926.01	0.817123	3.882828e-52	2.803281e-49
MsG0180002217.01	MsG0480020926.01	0.815616	8.439235e-52	5.847496e-49
MsG0180002218.01	MsG0480020926.01	0.847015	1.510778e-59	2.648825e-56
MsG0180002397.01	MsG0480020926.01	0.826373	2.810544e-54	2.631059e-51
MsG0180003857.01	MsG0480020926.01	0.812080	5.074486e-51	3.195440e-48
MsG0180004120.01	MsG0480020926.01	0.851364	9.313339e-61	1.880804e-57
MsG0180004185.01	MsG0480020926.01	0.800329	1.516621e-48	7.042543e-46
MsG0180004299.01	MsG0480020926.01	0.814743	1.318817e-51	8.922130e-49
MsG0180004538.01	MsG0480020926.01	0.849896	2.408292e-60	4.634481e-57
MsG0180004583.01	MsG0480020926.01	0.848382	6.353599e-60	1.163803e-56
MsG0180004835.01	MsG0480020926.01	0.832142	1.118977e-55	1.239709e-52
MsG0180004994.01	MsG0480020926.01	0.821177	4.639079e-53	3.746931e-50
MsG0180004995.01	MsG0480020926.01	0.857301	1.791442e-62	4.400907e-59
MsG0180005048.01	MsG0480020926.01	0.882449	1.032067e-70	6.289068e-67
MsG0180006133.01	MsG0480020926.01	0.840685	7.492373e-58	1.075445e-54
MsG0380012956.01	MsG0480020926.01	0.844529	7.147757e-59	1.157271e-55
MsG0380014542.01	MsG0480020926.01	0.832456	9.355998e-56	1.046260e-52
MsG0380014666.01	MsG0480020926.01	0.867180	1.654571e-65	5.723181e-62
MsG0480018785.01	MsG0480020926.01	0.820131	8.066181e-53	6.328951e-50
MsG0480020398.01	MsG0480020926.01	0.818853	1.578097e-52	1.194943e-49
MsG0480020856.01	MsG0480020926.01	0.818323	2.081611e-52	1.553204e-49
MsG0480020920.01	MsG0480020926.01	0.835438	1.677903e-56	2.051812e-53
MsG0480020921.01	MsG0480020926.01	0.966161	1.493066e-125	1.006972e-119
MsG0480020926.01	MsG0480020969.01	0.847222	1.325934e-59	2.340373e-56
MsG0480020926.01	MsG0480020970.01	0.915412	6.068350e-85	1.582991e-80
MsG0480020926.01	MsG0480020971.01	0.846016	2.829511e-59	4.804516e-56
MsG0480020926.01	MsG0480021015.01	0.904641	9.920251e-80	1.548756e-75
MsG0480020926.01	MsG0480021016.01	0.853456	2.361788e-61	5.106313e-58
MsG0480020926.01	MsG0480021048.01	0.921069	5.739869e-88	2.010884e-83
MsG0480020926.01	MsG0480021100.01	0.876487	1.343405e-68	6.526112e-65
MsG0480020926.01	MsG0480021301.01	0.912775	1.322898e-83	3.025848e-79
MsG0480020926.01	MsG0480021704.01	0.807227	5.601997e-50	3.103196e-47
MsG0480020926.01	MsG0480021773.01	0.839847	1.240386e-57	1.734644e-54
MsG0480020926.01	MsG0480021902.01	0.857930	1.166831e-62	2.927888e-59
MsG0480020926.01	MsG0480022307.01	0.892649	1.306590e-74	1.205101e-70
MsG0480020926.01	MsG0480022378.01	0.805420	1.346399e-49	7.119833e-47
MsG0480020926.01	MsG0480022784.01	0.833250	5.941176e-56	6.803687e-53
MsG0480020926.01	MsG0480022991.01	0.820401	6.993099e-53	5.527915e-50
MsG0480020926.01	MsG0480023003.01	0.873970	9.728718e-68	4.303343e-64
MsG0480020926.01	MsG0480023424.01	0.876431	1.403739e-68	6.804523e-65
MsG0480020926.01	MsG0480023426.01	0.904016	1.906273e-79	2.892329e-75
MsG0480020926.01	MsG0480023428.01	0.814472	1.514239e-51	1.017029e-48
MsG0480020926.01	MsG0480023679.01	0.820493	6.662643e-53	5.279822e-50
MsG0480020926.01	MsG0480023706.01	0.822949	1.801358e-53	1.529772e-50
MsG0480020926.01	MsG0480023842.01	0.841816	3.777332e-58	5.615881e-55
MsG0480020926.01	MsG0580024276.01	0.827163	1.820934e-54	1.743902e-51
MsG0480020926.01	MsG0580024787.01	0.821109	4.808204e-53	3.876237e-50
MsG0480020926.01	MsG0580025177.01	0.822923	1.826472e-53	1.550007e-50
MsG0480020926.01	MsG0580025186.01	0.803881	2.820790e-49	1.433805e-46
MsG0480020926.01	MsG0580025504.01	0.882663	8.622953e-71	5.296794e-67
MsG0480020926.01	MsG0580025506.01	0.830284	3.202497e-55	3.359030e-52
MsG0480020926.01	MsG0580028927.01	0.802498	5.451943e-49	2.674668e-46
MsG0480020926.01	MsG0580028955.01	0.897524	1.293826e-76	1.467530e-72
MsG0480020926.01	MsG0580029591.01	0.800475	1.416649e-48	6.602306e-46
MsG0480020926.01	MsG0680035776.01	0.810307	1.230094e-50	7.389049e-48
MsG0480020926.01	MsG0680035792.01	0.804257	2.356449e-49	1.209288e-46
MsG0480020926.01	MsG0780036534.01	0.878607	2.449225e-69	1.287125e-65
MsG0480020926.01	MsG0780038642.01	0.813490	2.493039e-51	1.630442e-48
MsG0480020926.01	MsG0780038736.01	0.841951	3.480084e-58	5.195985e-55
MsG0480020926.01	MsG0780039861.01	0.800409	1.461021e-48	6.798076e-46
MsG0480020926.01	MsG0780040620.01	0.876500	1.328697e-68	6.457570e-65
MsG0480020926.01	MsG0780040641.01	0.838726	2.423329e-57	3.274550e-54
MsG0480020926.01	MsG0780040671.01	0.832012	1.204749e-55	1.329817e-52
MsG0480020926.01	MsG0780040899.01	0.825865	3.712741e-54	3.425749e-51
MsG0480020926.01	MsG0780041008.01	0.803555	3.296973e-49	1.661885e-46
MsG0480020926.01	MsG0780041273.01	0.935959	3.722826e-97	3.087945e-92
MsG0480020926.01	MsG0780041359.01	0.846150	2.602488e-59	4.437340e-56
MsG0480020926.01	MsG0780041546.01	0.855105	7.888306e-62	1.800877e-58
MsG0480020926.01	MsG0880044437.01	0.818315	2.090281e-52	1.559332e-49
MsG0480020926.01	MsG0880045015.01	0.853890	1.771122e-61	3.885046e-58
MsG0480020926.01	MsG0880045612.01	0.817076	3.977099e-52	2.867766e-49
MsG0480020926.01	MsG0880045647.01	0.822031	2.944194e-53	2.435700e-50
MsG0480020926.01	MsG0880046904.01	0.834264	3.314579e-56	3.913139e-53
MsG0480020926.01	MsG0880046905.01	0.843580	1.283612e-58	2.017461e-55
MsG0480020926.01	MsG0880047649.01	0.819563	1.087851e-52	8.400551e-50
MsG0380015090.01	MsG0480020926.01	0.829023	6.492105e-55	6.563350e-52
MsG0380015340.01	MsG0480020926.01	0.847189	1.353803e-59	2.387172e-56
MsG0380016027.01	MsG0480020926.01	0.809021	2.325150e-50	1.349966e-47
MsG0380016165.01	MsG0480020926.01	0.840902	6.574144e-58	9.500099e-55
MsG0380017332.01	MsG0480020926.01	0.821774	3.376898e-53	2.773459e-50
MsG0380017440.01	MsG0480020926.01	0.805769	1.137806e-49	6.071249e-47
MsG0380017605.01	MsG0480020926.01	0.818355	2.047059e-52	1.528881e-49
MsG0380017632.01	MsG0480020926.01	0.807461	4.998689e-50	2.785902e-47
MsG0380017696.01	MsG0480020926.01	0.800904	1.158015e-48	5.456410e-46
MsG0380017932.01	MsG0480020926.01	0.822237	2.638182e-53	2.195505e-50
MsG0380018055.01	MsG0480020926.01	0.802298	5.995919e-49	2.926749e-46
MsG0480018228.01	MsG0480020926.01	0.812876	3.400614e-51	2.187140e-48
MsG0280007919.01	MsG0480020926.01	0.884508	1.806578e-71	1.194907e-67

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020926.01.T01	MTR_2g096570	94.737	152	4	3	1	149	1	151	1.06e-94	270
MsG0480020926.01.T01	MTR_4g063280	97.163	141	4	0	9	149	3	143	2.23e-93	267
MsG0480020926.01.T01	MTR_2g096610	88.591	149	14	2	1	149	1	146	1.13e-81	237
MsG0480020926.01.T01	MTR_4g071150	94.040	151	6	2	1	149	1	150	1.16e-81	237
MsG0480020926.01.T01	MTR_4g064005	93.960	149	6	1	1	149	1	146	2.35e-81	236
MsG0480020926.01.T01	MTR_4g063410	93.289	149	7	1	1	149	1	146	6.11e-81	235
MsG0480020926.01.T01	MTR_4g064967	93.960	149	6	1	1	149	1	146	1.45e-80	234
MsG0480020926.01.T01	MTR_8g086640	97.727	132	3	0	1	132	1	132	4.80e-76	223
MsG0480020926.01.T01	MTR_7g113160	82.090	134	22	2	10	143	13	144	5.45e-72	213
MsG0480020926.01.T01	MTR_7g108320	74.615	130	27	3	4	132	6	130	3.39e-60	182
MsG0480020926.01.T01	MTR_7g114060	73.846	130	30	1	3	132	2	127	4.18e-60	182
MsG0480020926.01.T01	MTR_7g114040	73.846	130	30	1	3	132	2	127	4.18e-60	182
MsG0480020926.01.T01	MTR_7g093910	72.441	127	32	1	4	130	5	128	2.93e-59	180
MsG0480020926.01.T01	MTR_2g082510	74.790	119	30	0	11	129	3	121	1.05e-58	179
MsG0480020926.01.T01	MTR_2g082220	73.950	119	31	0	11	129	3	121	1.24e-57	176
MsG0480020926.01.T01	MTR_6g005150	66.393	122	31	3	24	143	26	139	4.69e-48	152
MsG0480020926.01.T01	MTR_4g063300	80.000	105	15	1	45	149	10	108	1.05e-47	150
MsG0480020926.01.T01	MTR_7g114050	68.333	120	23	3	17	132	10	118	9.57e-46	145
MsG0480020926.01.T01	MTR_1g011750	59.292	113	44	2	21	132	23	134	9.91e-36	120
MsG0480020926.01.T01	MTR_1g011850	59.292	113	44	2	21	132	23	134	9.91e-36	120
MsG0480020926.01.T01	MTR_1g114050	59.633	109	42	2	21	128	20	127	8.20e-35	118
MsG0480020926.01.T01	MTR_1g071040	61.538	104	38	2	26	128	28	130	4.84e-34	116
MsG0480020926.01.T01	MTR_1g069770	52.174	92	43	1	45	135	9	100	1.58e-25	94.0
MsG0480020926.01.T01	MTR_7g010440	70.588	51	15	0	78	128	122	172	1.13e-16	75.1
MsG0480020926.01.T01	MTR_4g005910	74.419	43	11	0	87	129	4	46	1.88e-16	69.3
MsG0480020926.01.T01	MTR_4g048490	43.810	105	30	2	24	128	26	101	4.65e-16	69.7
MsG0480020926.01.T01	MTR_7g027610	41.818	110	38	3	20	128	10	94	4.47e-15	67.4
MsG0480020926.01.T01	MTR_0653s0030	53.704	54	25	0	56	109	44	97	1.34e-11	59.3
MsG0480020926.01.T01	MTR_2g096590	72.500	40	10	1	110	149	12	50	5.76e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020926.01.T01	AT5G02560	84.106	151	22	1	1	149	1	151	1.53e-80	234
MsG0480020926.01.T01	AT5G02560	72.571	175	22	2	1	149	1	175	1.88e-75	223
MsG0480020926.01.T01	AT5G27670	74.834	151	33	3	1	149	1	148	9.56e-73	215
MsG0480020926.01.T01	AT5G59870	75.676	148	29	3	4	144	3	150	1.39e-71	212
MsG0480020926.01.T01	AT1G51060	76.667	120	28	0	11	130	3	122	4.05e-61	185
MsG0480020926.01.T01	AT4G27230	75.630	119	29	0	11	129	3	121	1.17e-59	181
MsG0480020926.01.T01	AT4G27230	75.630	119	29	0	11	129	3	121	1.17e-59	181
MsG0480020926.01.T01	AT3G20670	75.630	119	29	0	11	129	3	121	3.20e-59	180
MsG0480020926.01.T01	AT1G08880	71.318	129	34	1	7	132	2	130	1.48e-58	179
MsG0480020926.01.T01	AT5G54640	74.790	119	30	0	11	129	3	121	2.20e-58	178
MsG0480020926.01.T01	AT1G54690	72.519	131	30	3	3	132	5	130	5.77e-58	177
MsG0480020926.01.T01	AT2G38810	59.821	112	43	2	21	131	25	135	2.40e-36	122
MsG0480020926.01.T01	AT2G38810	59.821	112	43	2	21	131	25	135	2.40e-36	122
MsG0480020926.01.T01	AT2G38810	59.821	112	43	2	21	131	25	135	2.40e-36	122
MsG0480020926.01.T01	AT2G38810	59.821	112	43	2	21	131	25	135	2.40e-36	122
MsG0480020926.01.T01	AT1G52740	59.633	109	42	2	25	132	27	134	1.58e-34	117
MsG0480020926.01.T01	AT3G54560	58.716	109	43	2	25	132	29	136	2.53e-34	117
MsG0480020926.01.T01	AT3G54560	58.716	109	43	2	25	132	29	136	2.53e-34	117
MsG0480020926.01.T01	AT4G13570	47.826	92	46	2	32	122	28	118	7.12e-20	79.7
MsG0480020926.01.T01	AT4G13570	47.253	91	46	2	33	122	35	124	1.81e-19	79.0

Find 45 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCTCCTTTCTTTGTGGTTT+TGG	0.155065	4:+50632627	None:intergenic
TCCTCCTGCTCCTTTCTTTG+TGG	0.311932	4:+50632621	None:intergenic
GACTGAAAAGGCTGCTTCTA+AGG	0.313763	4:-50632254	MsG0480020926.01.T01:CDS
CTTGTCACCGACTTCTTCCT+TGG	0.333455	4:+50632583	None:intergenic
AGAACTGCTGCAAGGTATAC+TGG	0.342117	4:+50632469	None:intergenic
CGATTCTTCCCACTGGGAAC+TGG	0.359689	4:+50632542	None:intergenic
TCTTCTTAGGCAAGAGAATA+GGG	0.366947	4:+50632275	None:intergenic
AAAGGAGCAGGAGGAAGGAA+GGG	0.396180	4:-50632613	MsG0480020926.01.T01:CDS
GTCTTCTTAGGCAAGAGAAT+AGG	0.408927	4:+50632274	None:intergenic
TACGCTCAGCGTGTTGGAAC+CGG	0.422732	4:-50632496	MsG0480020926.01.T01:CDS
CGCTGCTGAGGTTCTTGAGT+TGG	0.426254	4:-50632437	MsG0480020926.01.T01:CDS
AAGAATCAGATCTAAGCCTT+TGG	0.432647	4:+50632199	None:intergenic
AAGAGAATAGGGTTAATGTT+TGG	0.433482	4:+50632286	None:intergenic
GGAGCAGGAGGAAGGAAGGG+AGG	0.436317	4:-50632610	MsG0480020926.01.T01:CDS
GAAAGGAGCAGGAGGAAGGA+AGG	0.440519	4:-50632614	MsG0480020926.01.T01:CDS
GGCATGTGTTGTTGGCTGTT+AGG	0.442957	4:-50632369	MsG0480020926.01.T01:CDS
CATTCCAAGGCATGTGTTGT+TGG	0.459643	4:-50632377	MsG0480020926.01.T01:CDS
GCAGGAGGAAGGAAGGGAGG+AGG	0.468760	4:-50632607	MsG0480020926.01.T01:CDS
GCTGAGGTTCTTGAGTTGGC+TGG	0.475814	4:-50632433	MsG0480020926.01.T01:CDS
CAGTTCCCAGTGGGAAGAAT+CGG	0.476269	4:-50632541	MsG0480020926.01.T01:CDS
AGCACCAAAACCACAAAGAA+AGG	0.482345	4:-50632631	MsG0480020926.01.T01:CDS
CAAAGAAAGGAGCAGGAGGA+AGG	0.496497	4:-50632618	MsG0480020926.01.T01:CDS
GAGCTTGGTAAATTACTTGC+TGG	0.499780	4:-50632337	MsG0480020926.01.T01:CDS
ACAGCCAACAACACATGCCT+TGG	0.515073	4:+50632373	None:intergenic
ATCGGTCGATACTTGAAGAA+AGG	0.519021	4:-50632523	MsG0480020926.01.T01:CDS
AAAACCACAAAGAAAGGAGC+AGG	0.530917	4:-50632625	MsG0480020926.01.T01:CDS
GGAAGATACGCTCAGCGTGT+TGG	0.531317	4:-50632502	MsG0480020926.01.T01:CDS
GAAGGAAGGGAGGAGGACCA+AGG	0.532633	4:-50632600	MsG0480020926.01.T01:CDS
CTTGCCTAAGAAGACTGAAA+AGG	0.532710	4:-50632266	MsG0480020926.01.T01:CDS
TATCGACCGATTCTTCCCAC+TGG	0.544173	4:+50632535	None:intergenic
GTTAGGAACGATGAAGAGCT+TGG	0.552797	4:-50632352	MsG0480020926.01.T01:CDS
TCCCACTGGGAACTGGAGAC+CGG	0.556836	4:+50632549	None:intergenic
ACCACAAAGAAAGGAGCAGG+AGG	0.568964	4:-50632622	MsG0480020926.01.T01:CDS
TGCAAGGTATACTGGAGCAC+CGG	0.587239	4:+50632477	None:intergenic
GTGACAAGATCAATCAGAGC+CGG	0.601599	4:-50632568	MsG0480020926.01.T01:CDS
TCTTGAATATCTCGCTGCTG+AGG	0.603455	4:-50632449	MsG0480020926.01.T01:CDS
AGGAGGACCAAGGAAGAAGT+CGG	0.610829	4:-50632590	MsG0480020926.01.T01:CDS
GCCGGTCTCCAGTTCCCAGT+GGG	0.615696	4:-50632550	MsG0480020926.01.T01:CDS
AGAAGAATAGAATCATTCCA+AGG	0.617592	4:-50632390	MsG0480020926.01.T01:CDS
AAAAGCTGGAAAGTCTCCAA+AGG	0.624560	4:-50632215	MsG0480020926.01.T01:CDS
ATCGACCGATTCTTCCCACT+GGG	0.626884	4:+50632536	None:intergenic
GCTGGTGTTACAATTGCTCA+CGG	0.638494	4:-50632319	MsG0480020926.01.T01:CDS
GATATTCAAGAACTGCTGCA+AGG	0.659467	4:+50632461	None:intergenic
AGCCGGTCTCCAGTTCCCAG+TGG	0.691656	4:-50632551	MsG0480020926.01.T01:CDS
GGTGTTACAATTGCTCACGG+TGG	0.811864	4:-50632316	MsG0480020926.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGAGAATAGGGTTAATGTT+TGG	+	Chr4:50632567-50632586	None:intergenic	30.0%
	AGAAGAATAGAATCATTCCA+AGG	-	Chr4:50632460-50632479	MsG0480020926.01.T01:CDS	30.0%
	TCTTCTTAGGCAAGAGAATA+GGG	+	Chr4:50632578-50632597	None:intergenic	35.0%
	AAAACCACAAAGAAAGGAGC+AGG	-	Chr4:50632225-50632244	MsG0480020926.01.T01:CDS	40.0%
	AAAAGCTGGAAAGTCTCCAA+AGG	-	Chr4:50632635-50632654	MsG0480020926.01.T01:CDS	40.0%
	AGCACCAAAACCACAAAGAA+AGG	-	Chr4:50632219-50632238	MsG0480020926.01.T01:CDS	40.0%
	ATCGGTCGATACTTGAAGAA+AGG	-	Chr4:50632327-50632346	MsG0480020926.01.T01:CDS	40.0%
	CTTGCCTAAGAAGACTGAAA+AGG	-	Chr4:50632584-50632603	MsG0480020926.01.T01:CDS	40.0%
	GAGCTTGGTAAATTACTTGC+TGG	-	Chr4:50632513-50632532	MsG0480020926.01.T01:CDS	40.0%
	GATATTCAAGAACTGCTGCA+AGG	+	Chr4:50632392-50632411	None:intergenic	40.0%
	GTCTTCTTAGGCAAGAGAAT+AGG	+	Chr4:50632579-50632598	None:intergenic	40.0%
!	TGCTCCTTTCTTTGTGGTTT+TGG	+	Chr4:50632226-50632245	None:intergenic	40.0%
!!!	GGAGACTTTCCAGCTTTTTT+GGG	+	Chr4:50632633-50632652	None:intergenic	40.0%
!!!	TGGAGACTTTCCAGCTTTTT+TGG	+	Chr4:50632634-50632653	None:intergenic	40.0%
	AGAACTGCTGCAAGGTATAC+TGG	+	Chr4:50632384-50632403	None:intergenic	45.0%
	CATTCCAAGGCATGTGTTGT+TGG	-	Chr4:50632473-50632492	MsG0480020926.01.T01:CDS	45.0%
	CCTAAGTCTCCCAAAAAAGC+TGG	-	Chr4:50632621-50632640	MsG0480020926.01.T01:CDS	45.0%
	GACTGAAAAGGCTGCTTCTA+AGG	-	Chr4:50632596-50632615	MsG0480020926.01.T01:CDS	45.0%
	GTGACAAGATCAATCAGAGC+CGG	-	Chr4:50632282-50632301	MsG0480020926.01.T01:CDS	45.0%
	GTTAGGAACGATGAAGAGCT+TGG	-	Chr4:50632498-50632517	MsG0480020926.01.T01:CDS	45.0%
	TCTTGAATATCTCGCTGCTG+AGG	-	Chr4:50632401-50632420	MsG0480020926.01.T01:CDS	45.0%
!	GCAGCCTTTTCAGTCTTCTT+AGG	+	Chr4:50632591-50632610	None:intergenic	45.0%
!!	GCTGGTGTTACAATTGCTCA+CGG	-	Chr4:50632531-50632550	MsG0480020926.01.T01:CDS	45.0%
!!!	CCAGCTTTTTTGGGAGACTT+AGG	+	Chr4:50632624-50632643	None:intergenic	45.0%
	AAAGGAGCAGGAGGAAGGAA+GGG	-	Chr4:50632237-50632256	MsG0480020926.01.T01:CDS	50.0%
	ACAGCCAACAACACATGCCT+TGG	+	Chr4:50632480-50632499	None:intergenic	50.0%
	ACCACAAAGAAAGGAGCAGG+AGG	-	Chr4:50632228-50632247	MsG0480020926.01.T01:CDS	50.0%
	AGGAGGACCAAGGAAGAAGT+CGG	-	Chr4:50632260-50632279	MsG0480020926.01.T01:CDS	50.0%
	CAAAGAAAGGAGCAGGAGGA+AGG	-	Chr4:50632232-50632251	MsG0480020926.01.T01:CDS	50.0%
	CAGTTCCCAGTGGGAAGAAT+CGG	-	Chr4:50632309-50632328	MsG0480020926.01.T01:CDS	50.0%
	TCCTCCTGCTCCTTTCTTTG+TGG	+	Chr4:50632232-50632251	None:intergenic	50.0%
	TGCAAGGTATACTGGAGCAC+CGG	+	Chr4:50632376-50632395	None:intergenic	50.0%
!	ATCGACCGATTCTTCCCACT+GGG	+	Chr4:50632317-50632336	None:intergenic	50.0%
!	GGCATGTGTTGTTGGCTGTT+AGG	-	Chr4:50632481-50632500	MsG0480020926.01.T01:CDS	50.0%
!	GGTGTTACAATTGCTCACGG+TGG	-	Chr4:50632534-50632553	MsG0480020926.01.T01:CDS	50.0%
!	TATCGACCGATTCTTCCCAC+TGG	+	Chr4:50632318-50632337	None:intergenic	50.0%
!!	CTTGTCACCGACTTCTTCCT+TGG	+	Chr4:50632270-50632289	None:intergenic	50.0%
	CGATTCTTCCCACTGGGAAC+TGG	+	Chr4:50632311-50632330	None:intergenic	55.0%
	CGCTGCTGAGGTTCTTGAGT+TGG	-	Chr4:50632413-50632432	MsG0480020926.01.T01:CDS	55.0%
	GAAAGGAGCAGGAGGAAGGA+AGG	-	Chr4:50632236-50632255	MsG0480020926.01.T01:CDS	55.0%
	GGAAGATACGCTCAGCGTGT+TGG	-	Chr4:50632348-50632367	MsG0480020926.01.T01:CDS	55.0%
	TACGCTCAGCGTGTTGGAAC+CGG	-	Chr4:50632354-50632373	MsG0480020926.01.T01:CDS	55.0%
!!	GCTGAGGTTCTTGAGTTGGC+TGG	-	Chr4:50632417-50632436	MsG0480020926.01.T01:CDS	55.0%
	GAAGGAAGGGAGGAGGACCA+AGG	-	Chr4:50632250-50632269	MsG0480020926.01.T01:CDS	60.0%
	TCCCACTGGGAACTGGAGAC+CGG	+	Chr4:50632304-50632323	None:intergenic	60.0%
	AGCCGGTCTCCAGTTCCCAG+TGG	-	Chr4:50632299-50632318	MsG0480020926.01.T01:CDS	65.0%
	GCAGGAGGAAGGAAGGGAGG+AGG	-	Chr4:50632243-50632262	MsG0480020926.01.T01:CDS	65.0%
	GCCGGTCTCCAGTTCCCAGT+GGG	-	Chr4:50632300-50632319	MsG0480020926.01.T01:CDS	65.0%
	GGAGCAGGAGGAAGGAAGGG+AGG	-	Chr4:50632240-50632259	MsG0480020926.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	50632210	50632662	50632210	ID=MsG0480020926.01;Name=MsG0480020926.01
Chr4	mRNA	50632210	50632662	50632210	ID=MsG0480020926.01.T01;Parent=MsG0480020926.01;Name=MsG0480020926.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|150
Chr4	exon	50632210	50632662	50632210	ID=MsG0480020926.01.T01:exon:328;Parent=MsG0480020926.01.T01
Chr4	CDS	50632210	50632662	50632210	ID=MsG0480020926.01.T01:cds;Parent=MsG0480020926.01.T01

Gene Sequence

>MsG0480020926.01.T01

ATGGACGCAAGCACCAAAACCACAAAGAAAGGAGCAGGAGGAAGGAAGGGAGGAGGACCAAGGAAGAAGTCGGTGACAAGATCAATCAGAGCCGGTCTCCAGTTCCCAGTGGGAAGAATCGGTCGATACTTGAAGAAAGGAAGATACGCTCAGCGTGTTGGAACCGGTGCTCCAGTATACCTTGCAGCAGTTCTTGAATATCTCGCTGCTGAGGTTCTTGAGTTGGCTGGAAATGCAGCACGTGATAACAAGAAGAATAGAATCATTCCAAGGCATGTGTTGTTGGCTGTTAGGAACGATGAAGAGCTTGGTAAATTACTTGCTGGTGTTACAATTGCTCACGGTGGTGTTCTTCCAAACATTAACCCTATTCTCTTGCCTAAGAAGACTGAAAAGGCTGCTTCTAAGGAACCTAAGTCTCCCAAAAAAGCTGGAAAGTCTCCAAAGGCTTAG

Protein sequence

>MsG0480020926.01.T01

MDASTKTTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTEKAASKEPKSPKKAGKSPKA*