AlfalfaGEDB | MsG0480020970.01

M. sativa cultivar ZhongmuNo.1 / MsG0480020970.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020970.01.T01	XP_003606644.3	95.333	150	4	2	1	149	1	148	1.81E-90	269

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020970.01.T01	Q2HU68	89.262	149	15	1	1	149	1	148	6.65E-83	243

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020970.01.T01	A0A396I5J8	95.333	150	4	2	1	149	1	148	8.63e-91	269

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048797.01	MsG0480020970.01	0.824049	9.961233e-54	8.725667e-51
MsG0180001293.01	MsG0480020970.01	0.804172	2.454058e-49	1.256688e-46
MsG0180001719.01	MsG0480020970.01	0.810669	1.027721e-50	6.233420e-48
MsG0180002134.01	MsG0480020970.01	0.816945	4.256605e-52	3.058568e-49
MsG0180002217.01	MsG0480020970.01	0.803052	4.190402e-49	2.084927e-46
MsG0180002218.01	MsG0480020970.01	0.813682	2.261722e-51	1.486825e-48
MsG0180002397.01	MsG0480020970.01	0.815171	1.060079e-51	7.254763e-49
MsG0180002428.01	MsG0480020970.01	0.810755	9.846658e-51	5.986063e-48
MsG0180003857.01	MsG0480020970.01	0.819235	1.292054e-52	9.886500e-50
MsG0180004120.01	MsG0480020970.01	0.855006	8.424121e-62	1.917124e-58
MsG0180004538.01	MsG0480020970.01	0.841444	4.734205e-58	6.958329e-55
MsG0180004583.01	MsG0480020970.01	0.840923	6.491106e-58	9.386229e-55
MsG0180004835.01	MsG0480020970.01	0.802725	4.895205e-49	2.415637e-46
MsG0180004995.01	MsG0480020970.01	0.808299	3.315456e-50	1.888815e-47
MsG0180005048.01	MsG0480020970.01	0.855765	5.065206e-62	1.182266e-58
MsG0180006133.01	MsG0480020970.01	0.814842	1.254026e-51	8.506404e-49
MsG0280006378.01	MsG0480020970.01	0.809613	1.735383e-50	1.023728e-47
MsG0380012956.01	MsG0480020970.01	0.834614	2.707374e-56	3.229857e-53
MsG0380014542.01	MsG0480020970.01	0.828087	1.092446e-54	1.074844e-51
MsG0380014666.01	MsG0480020970.01	0.848824	4.792351e-60	8.905601e-57
MsG0480020398.01	MsG0480020970.01	0.859447	4.109285e-63	1.085675e-59
MsG0480020856.01	MsG0480020970.01	0.811719	6.081940e-51	3.792809e-48
MsG0480020920.01	MsG0480020970.01	0.811119	8.209562e-51	5.039160e-48
MsG0480020921.01	MsG0480020970.01	0.913750	4.283515e-84	1.028521e-79
MsG0480020926.01	MsG0480020970.01	0.915412	6.068350e-85	1.582991e-80
MsG0480020937.01	MsG0480020970.01	0.816161	6.377533e-52	4.484953e-49
MsG0480020969.01	MsG0480020970.01	0.843719	1.178635e-58	1.860374e-55
MsG0480020970.01	MsG0480020971.01	0.828802	7.341656e-55	7.374606e-52
MsG0480020970.01	MsG0480021015.01	0.818838	1.590119e-52	1.203546e-49
MsG0480020970.01	MsG0480021016.01	0.815661	8.247549e-52	5.721227e-49
MsG0480020970.01	MsG0480021048.01	0.899222	2.453594e-77	3.005172e-73
MsG0480020970.01	MsG0480021100.01	0.873057	1.974139e-67	8.450868e-64
MsG0480020970.01	MsG0480021301.01	0.910829	1.208198e-82	2.514284e-78
MsG0480020970.01	MsG0480021704.01	0.817629	2.986131e-52	2.186027e-49
MsG0480020970.01	MsG0480021773.01	0.839179	1.850147e-57	2.534637e-54
MsG0480020970.01	MsG0480021902.01	0.849600	2.914597e-60	5.554094e-57
MsG0480020970.01	MsG0480022307.01	0.880222	6.557303e-70	3.663663e-66
MsG0480020970.01	MsG0480022784.01	0.828332	9.533549e-55	9.446459e-52
MsG0480020970.01	MsG0480023003.01	0.842531	2.442990e-58	3.715072e-55
MsG0480020970.01	MsG0480023414.01	0.823681	1.215100e-53	1.053566e-50
MsG0480020970.01	MsG0480023424.01	0.852843	3.538492e-61	7.493457e-58
MsG0480020970.01	MsG0480023426.01	0.889396	2.515518e-73	2.026014e-69
MsG0480020970.01	MsG0480023428.01	0.807569	4.741603e-50	2.649890e-47
MsG0480020970.01	MsG0480023706.01	0.851500	8.525100e-61	1.728956e-57
MsG0480020970.01	MsG0480023842.01	0.864407	1.243473e-64	3.899940e-61
MsG0480020970.01	MsG0480024019.01	0.827196	1.787944e-54	1.714032e-51
MsG0480020970.01	MsG0580024276.01	0.834293	3.258981e-56	3.850938e-53
MsG0480020970.01	MsG0580025177.01	0.806046	9.946755e-50	5.345245e-47
MsG0480020970.01	MsG0580025504.01	0.881934	1.588071e-70	9.485611e-67
MsG0480020970.01	MsG0580028927.01	0.801037	1.087516e-48	5.141621e-46
MsG0480020970.01	MsG0580028955.01	0.903518	3.194786e-79	4.745774e-75
MsG0480020970.01	MsG0680035776.01	0.819258	1.276363e-52	9.772892e-50
MsG0480020970.01	MsG0680035792.01	0.804800	1.815123e-49	9.447129e-47
MsG0480020970.01	MsG0780036534.01	0.827840	1.252376e-54	1.223252e-51
MsG0480020970.01	MsG0780038642.01	0.832797	7.702148e-56	8.701161e-53
MsG0480020970.01	MsG0780038736.01	0.834271	3.301343e-56	3.898325e-53
MsG0480020970.01	MsG0780040620.01	0.820529	6.537663e-53	5.185847e-50
MsG0480020970.01	MsG0780040641.01	0.846363	2.276588e-59	3.908873e-56
MsG0480020970.01	MsG0780040671.01	0.827395	1.602242e-54	1.545044e-51
MsG0480020970.01	MsG0780040899.01	0.835907	1.276631e-56	1.583244e-53
MsG0480020970.01	MsG0780041219.01	0.845269	4.511051e-59	7.477365e-56
MsG0480020970.01	MsG0780041232.01	0.810404	1.172430e-50	7.060495e-48
MsG0480020970.01	MsG0780041273.01	0.903988	1.961989e-79	2.972354e-75
MsG0480020970.01	MsG0780041359.01	0.843266	1.557761e-58	2.424098e-55
MsG0480020970.01	MsG0780041546.01	0.836004	1.206570e-56	1.500751e-53
MsG0480020970.01	MsG0880044437.01	0.826779	2.249996e-54	2.130597e-51
MsG0480020970.01	MsG0880045015.01	0.836735	7.860026e-57	9.994411e-54
MsG0480020970.01	MsG0880045647.01	0.830188	3.380063e-55	3.535724e-52
MsG0480020970.01	MsG0880046904.01	0.841859	3.680332e-58	5.479264e-55
MsG0480020970.01	MsG0880046905.01	0.831597	1.525634e-55	1.663503e-52
MsG0380015090.01	MsG0480020970.01	0.810901	9.151812e-51	5.585624e-48
MsG0380015219.01	MsG0480020970.01	0.801180	1.016749e-48	4.824172e-46
MsG0380015340.01	MsG0480020970.01	0.851169	1.057548e-60	2.121786e-57
MsG0380016091.01	MsG0480020970.01	0.802778	4.774504e-49	2.359219e-46
MsG0380016165.01	MsG0480020970.01	0.814189	1.749119e-51	1.165724e-48
MsG0380017128.01	MsG0480020970.01	0.818210	2.207464e-52	1.641982e-49
MsG0380017181.01	MsG0480020970.01	0.802147	6.440449e-49	3.131513e-46
MsG0380017332.01	MsG0480020970.01	0.838379	2.977706e-57	3.981172e-54
MsG0380017588.01	MsG0480020970.01	0.804633	1.967431e-49	1.019481e-46
MsG0380017605.01	MsG0480020970.01	0.825607	4.275211e-54	3.915596e-51
MsG0380017632.01	MsG0480020970.01	0.803964	2.711279e-49	1.381051e-46
MsG0380017696.01	MsG0480020970.01	0.808803	2.588027e-50	1.493900e-47
MsG0480018228.01	MsG0480020970.01	0.840961	6.341431e-58	9.180420e-55
MsG0280007919.01	MsG0480020970.01	0.872233	3.721757e-67	1.545528e-63

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020970.01.T01	MTR_2g096610	89.262	149	15	1	1	149	1	148	6.48e-84	243
MsG0480020970.01.T01	MTR_4g063280	93.939	132	7	1	19	149	14	145	8.14e-82	238
MsG0480020970.01.T01	MTR_4g071150	91.447	152	10	2	1	149	1	152	2.27e-81	236
MsG0480020970.01.T01	MTR_2g096570	88.235	153	14	1	1	149	1	153	3.02e-81	236
MsG0480020970.01.T01	MTR_4g064967	90.667	150	11	2	1	149	1	148	9.20e-81	235
MsG0480020970.01.T01	MTR_4g064005	91.333	150	10	2	1	149	1	148	9.20e-80	232
MsG0480020970.01.T01	MTR_4g063410	90.000	150	12	2	1	149	1	148	4.18e-79	231
MsG0480020970.01.T01	MTR_8g086640	92.424	132	9	1	1	131	1	132	2.07e-74	219
MsG0480020970.01.T01	MTR_7g113160	81.061	132	25	0	10	141	13	144	3.24e-73	216
MsG0480020970.01.T01	MTR_7g108320	72.868	129	34	1	4	131	2	130	3.19e-60	183
MsG0480020970.01.T01	MTR_7g093910	73.016	126	34	0	3	128	2	127	1.51e-59	181
MsG0480020970.01.T01	MTR_7g114060	73.643	129	31	1	3	131	2	127	1.71e-59	181
MsG0480020970.01.T01	MTR_7g114040	73.643	129	31	1	3	131	2	127	1.71e-59	181
MsG0480020970.01.T01	MTR_2g082510	77.477	111	25	0	18	128	11	121	8.02e-58	176
MsG0480020970.01.T01	MTR_2g082220	78.704	108	23	0	21	128	14	121	2.71e-57	175
MsG0480020970.01.T01	MTR_6g005150	63.780	127	32	3	23	148	26	139	3.09e-47	150
MsG0480020970.01.T01	MTR_7g114050	68.067	119	27	2	13	131	11	118	3.93e-46	147
MsG0480020970.01.T01	MTR_4g063300	75.238	105	21	1	44	148	10	109	1.70e-45	144
MsG0480020970.01.T01	MTR_1g114050	56.557	122	51	2	7	127	7	127	5.79e-36	121
MsG0480020970.01.T01	MTR_1g011750	59.292	113	44	2	20	131	23	134	7.95e-36	120
MsG0480020970.01.T01	MTR_1g011850	59.292	113	44	2	20	131	23	134	7.95e-36	120
MsG0480020970.01.T01	MTR_1g071040	61.538	104	38	2	25	127	28	130	3.97e-34	116
MsG0480020970.01.T01	MTR_1g069770	50.000	96	47	1	44	138	9	104	1.05e-25	94.4
MsG0480020970.01.T01	MTR_7g010440	70.588	51	15	0	77	127	122	172	1.29e-16	74.7
MsG0480020970.01.T01	MTR_4g005910	74.419	43	11	0	86	128	4	46	2.02e-16	69.3
MsG0480020970.01.T01	MTR_4g048490	43.810	105	30	2	23	127	26	101	3.81e-16	69.7
MsG0480020970.01.T01	MTR_7g027610	41.818	110	38	3	19	127	10	94	4.08e-15	67.4
MsG0480020970.01.T01	MTR_2g096590	75.000	40	10	0	109	148	12	51	7.83e-13	59.7
MsG0480020970.01.T01	MTR_0653s0030	53.704	54	25	0	55	108	44	97	1.28e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020970.01.T01	AT5G02560	81.046	153	25	2	1	149	1	153	4.84e-77	226
MsG0480020970.01.T01	AT5G27670	75.497	151	34	2	1	149	1	150	1.40e-74	219
MsG0480020970.01.T01	AT5G02560	70.056	177	25	3	1	149	1	177	3.54e-72	214
MsG0480020970.01.T01	AT5G59870	74.324	148	36	1	4	149	3	150	1.89e-71	211
MsG0480020970.01.T01	AT1G51060	74.380	121	31	0	18	138	11	131	1.08e-60	184
MsG0480020970.01.T01	AT4G27230	72.727	121	33	0	18	138	11	131	3.11e-59	180
MsG0480020970.01.T01	AT4G27230	72.727	121	33	0	18	138	11	131	3.11e-59	180
MsG0480020970.01.T01	AT3G20670	73.554	121	32	0	18	138	11	131	3.83e-59	180
MsG0480020970.01.T01	AT1G08880	73.600	125	29	1	11	131	6	130	1.19e-58	179
MsG0480020970.01.T01	AT1G54690	73.600	125	29	1	11	131	6	130	1.90e-58	178
MsG0480020970.01.T01	AT5G54640	74.359	117	30	0	18	134	11	127	1.25e-57	176
MsG0480020970.01.T01	AT2G38810	58.621	116	46	2	16	130	21	135	1.74e-36	122
MsG0480020970.01.T01	AT2G38810	58.621	116	46	2	16	130	21	135	1.74e-36	122
MsG0480020970.01.T01	AT2G38810	58.621	116	46	2	16	130	21	135	1.74e-36	122
MsG0480020970.01.T01	AT2G38810	58.621	116	46	2	16	130	21	135	1.74e-36	122
MsG0480020970.01.T01	AT1G52740	59.633	109	42	2	24	131	27	134	1.43e-34	117
MsG0480020970.01.T01	AT3G54560	58.716	109	43	2	24	131	29	136	2.29e-34	117
MsG0480020970.01.T01	AT3G54560	58.716	109	43	2	24	131	29	136	2.29e-34	117
MsG0480020970.01.T01	AT4G13570	47.826	92	46	2	31	121	28	118	5.94e-20	80.1
MsG0480020970.01.T01	AT4G13570	47.253	91	46	2	32	121	35	124	1.49e-19	79.3

Find 43 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGACTTTCCAGCCTTCTT+TGG	0.239817	4:-51341164	None:intergenic
GATCAGATCTAAGCCTTCTT+TGG	0.251178	4:-51341185	None:intergenic
GGCTCCTTTCTTCGCGGTCT+TGG	0.319054	4:-51340763	None:intergenic
CTTGTCACCGACTTCTTCCT+TGG	0.333455	4:-51340804	None:intergenic
TGCTGCTGAAGTTCTTGAAT+TGG	0.339223	4:+51340950	MsG0480020970.01.T01:CDS
AGAACTGCTGCTAGGTATAC+TGG	0.360588	4:-51340918	None:intergenic
TTCTTTGGCTCTTTGTTAGC+AGG	0.375405	4:-51341149	None:intergenic
TCTTCTTAGGCAAGAGGATT+GGG	0.401488	4:-51341112	None:intergenic
GTCTTCTTAGGCAAGAGGAT+TGG	0.405495	4:-51341113	None:intergenic
AAGAGGATTGGGTTAATGTT+TGG	0.407916	4:-51341101	None:intergenic
CAATTTCCAGTCGGAAGAAT+CGG	0.409724	4:+51340846	MsG0480020970.01.T01:CDS
GGCATGTGTTGTTGGCTGTT+AGG	0.442957	4:+51341018	MsG0480020970.01.T01:CDS
AGCACCAAGACCGCGAAGAA+AGG	0.452810	4:+51340759	MsG0480020970.01.T01:CDS
GCTGAAGTTCTTGAATTGGC+TGG	0.461152	4:+51340954	MsG0480020970.01.T01:CDS
AACAAAGAGCCAAAGAAGGC+TGG	0.466354	4:+51341155	MsG0480020970.01.T01:CDS
TATTCCAAGGCATGTGTTGT+TGG	0.470522	4:+51341010	MsG0480020970.01.T01:CDS
AAAGGAGCCGGTGGAAGGAA+AGG	0.476592	4:+51340777	MsG0480020970.01.T01:CDS
TACGCTCAGCGTGTTGGTAC+CGG	0.482649	4:+51340891	MsG0480020970.01.T01:CDS
TGGTCCTCCTTTCCTTCCAC+CGG	0.483261	4:-51340784	None:intergenic
GAGCTTGGTAAATTACTTGC+TGG	0.499780	4:+51341050	MsG0480020970.01.T01:CDS
ACAGCCAACAACACATGCCT+TGG	0.515073	4:-51341014	None:intergenic
ATCGGTCGATACTTGAAGAA+AGG	0.519021	4:+51340864	MsG0480020970.01.T01:CDS
GGCTGGAAAGTCTCCAAAGA+AGG	0.525629	4:+51341172	MsG0480020970.01.T01:CDS
TCCACCGGCTCCTTTCTTCG+CGG	0.538173	4:-51340769	None:intergenic
TGCTAACAAAGAGCCAAAGA+AGG	0.544648	4:+51341151	MsG0480020970.01.T01:CDS
TCCGACTGGAAATTGAAGAC+CGG	0.546631	4:-51340838	None:intergenic
TTTCAGTCTTCTTAGGCAAG+AGG	0.549625	4:-51341118	None:intergenic
CGAAGAAAGGAGCCGGTGGA+AGG	0.552463	4:+51340772	MsG0480020970.01.T01:CDS
GTTAGGAACGATGAAGAGCT+TGG	0.552797	4:+51341035	MsG0480020970.01.T01:CDS
GCTGGTGTCACAATTGCTCA+TGG	0.556477	4:+51341068	MsG0480020970.01.T01:CDS
GGAAGATACGCTCAGCGTGT+TGG	0.585684	4:+51340885	MsG0480020970.01.T01:CDS
TATCGACCGATTCTTCCGAC+TGG	0.586938	4:-51340852	None:intergenic
AAGACCGCGAAGAAAGGAGC+CGG	0.590011	4:+51340765	MsG0480020970.01.T01:CDS
GATATTCAAGAACTGCTGCT+AGG	0.592671	4:-51340926	None:intergenic
TGCTAGGTATACTGGAGCAC+CGG	0.594421	4:-51340910	None:intergenic
GTGACAAGATCAATCAGAGC+CGG	0.601599	4:+51340819	MsG0480020970.01.T01:CDS
ACCGCGAAGAAAGGAGCCGG+TGG	0.603380	4:+51340768	MsG0480020970.01.T01:CDS
GCCGGTCTTCAATTTCCAGT+CGG	0.613739	4:+51340837	MsG0480020970.01.T01:CDS
AGAAGAATAGAATTATTCCA+AGG	0.617592	4:+51340997	MsG0480020970.01.T01:CDS
GGAGCCGGTGGAAGGAAAGG+AGG	0.629948	4:+51340780	MsG0480020970.01.T01:CDS
AGGAGGACCAAGGAAGAAGT+CGG	0.642719	4:+51340797	MsG0480020970.01.T01:CDS
GTGGAAGGAAAGGAGGACCA+AGG	0.686614	4:+51340787	MsG0480020970.01.T01:CDS
GGTGTCACAATTGCTCATGG+TGG	0.701079	4:+51341071	MsG0480020970.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AGAAGAATAGAATTATTCCA+AGG	+	Chr4:51340997-51341016	MsG0480020970.01.T01:CDS	25.0%
	AAGAGGATTGGGTTAATGTT+TGG	-	Chr4:51341104-51341123	None:intergenic	35.0%
	ATCGGTCGATACTTGAAGAA+AGG	+	Chr4:51340864-51340883	MsG0480020970.01.T01:CDS	40.0%
	CAATTTCCAGTCGGAAGAAT+CGG	+	Chr4:51340846-51340865	MsG0480020970.01.T01:CDS	40.0%
	GAGCTTGGTAAATTACTTGC+TGG	+	Chr4:51341050-51341069	MsG0480020970.01.T01:CDS	40.0%
	GATATTCAAGAACTGCTGCT+AGG	-	Chr4:51340929-51340948	None:intergenic	40.0%
	TATTCCAAGGCATGTGTTGT+TGG	+	Chr4:51341010-51341029	MsG0480020970.01.T01:CDS	40.0%
	TCTTCTTAGGCAAGAGGATT+GGG	-	Chr4:51341115-51341134	None:intergenic	40.0%
	TGCTAACAAAGAGCCAAAGA+AGG	+	Chr4:51341151-51341170	MsG0480020970.01.T01:CDS	40.0%
	TGCTGCTGAAGTTCTTGAAT+TGG	+	Chr4:51340950-51340969	MsG0480020970.01.T01:CDS	40.0%
	TTTCAGTCTTCTTAGGCAAG+AGG	-	Chr4:51341121-51341140	None:intergenic	40.0%
!!	TTCTTTGGCTCTTTGTTAGC+AGG	-	Chr4:51341152-51341171	None:intergenic	40.0%
!!!	GCAGCTTTTTCAGTCTTCTT+AGG	-	Chr4:51341128-51341147	None:intergenic	40.0%
	AACAAAGAGCCAAAGAAGGC+TGG	+	Chr4:51341155-51341174	MsG0480020970.01.T01:CDS	45.0%
	AGAACTGCTGCTAGGTATAC+TGG	-	Chr4:51340921-51340940	None:intergenic	45.0%
	GCTGAAGTTCTTGAATTGGC+TGG	+	Chr4:51340954-51340973	MsG0480020970.01.T01:CDS	45.0%
	GTCTTCTTAGGCAAGAGGAT+TGG	-	Chr4:51341116-51341135	None:intergenic	45.0%
	GTGACAAGATCAATCAGAGC+CGG	+	Chr4:51340819-51340838	MsG0480020970.01.T01:CDS	45.0%
	GTTAGGAACGATGAAGAGCT+TGG	+	Chr4:51341035-51341054	MsG0480020970.01.T01:CDS	45.0%
	TCCGACTGGAAATTGAAGAC+CGG	-	Chr4:51340841-51340860	None:intergenic	45.0%
	ACAGCCAACAACACATGCCT+TGG	-	Chr4:51341017-51341036	None:intergenic	50.0%
	AGGAGGACCAAGGAAGAAGT+CGG	+	Chr4:51340797-51340816	MsG0480020970.01.T01:CDS	50.0%
	GCCGGTCTTCAATTTCCAGT+CGG	+	Chr4:51340837-51340856	MsG0480020970.01.T01:CDS	50.0%
	GGAGACTTTCCAGCCTTCTT+TGG	-	Chr4:51341167-51341186	None:intergenic	50.0%
	GGCTGGAAAGTCTCCAAAGA+AGG	+	Chr4:51341172-51341191	MsG0480020970.01.T01:CDS	50.0%
	TGCTAGGTATACTGGAGCAC+CGG	-	Chr4:51340913-51340932	None:intergenic	50.0%
!	GGCATGTGTTGTTGGCTGTT+AGG	+	Chr4:51341018-51341037	MsG0480020970.01.T01:CDS	50.0%
!	GGTGTCACAATTGCTCATGG+TGG	+	Chr4:51341071-51341090	MsG0480020970.01.T01:CDS	50.0%
!	TATCGACCGATTCTTCCGAC+TGG	-	Chr4:51340855-51340874	None:intergenic	50.0%
!!	CTTGTCACCGACTTCTTCCT+TGG	-	Chr4:51340807-51340826	None:intergenic	50.0%
!!	GCTGGTGTCACAATTGCTCA+TGG	+	Chr4:51341068-51341087	MsG0480020970.01.T01:CDS	50.0%
	AAAGGAGCCGGTGGAAGGAA+AGG	+	Chr4:51340777-51340796	MsG0480020970.01.T01:CDS	55.0%
	AAGACCGCGAAGAAAGGAGC+CGG	+	Chr4:51340765-51340784	MsG0480020970.01.T01:CDS	55.0%
	AGCACCAAGACCGCGAAGAA+AGG	+	Chr4:51340759-51340778	MsG0480020970.01.T01:CDS	55.0%
	GGAAGATACGCTCAGCGTGT+TGG	+	Chr4:51340885-51340904	MsG0480020970.01.T01:CDS	55.0%
	GTGGAAGGAAAGGAGGACCA+AGG	+	Chr4:51340787-51340806	MsG0480020970.01.T01:CDS	55.0%
	TGGTCCTCCTTTCCTTCCAC+CGG	-	Chr4:51340787-51340806	None:intergenic	55.0%
!	TACGCTCAGCGTGTTGGTAC+CGG	+	Chr4:51340891-51340910	MsG0480020970.01.T01:CDS	55.0%
	CGAAGAAAGGAGCCGGTGGA+AGG	+	Chr4:51340772-51340791	MsG0480020970.01.T01:CDS	60.0%
	GGCTCCTTTCTTCGCGGTCT+TGG	-	Chr4:51340766-51340785	None:intergenic	60.0%
!!	TCCACCGGCTCCTTTCTTCG+CGG	-	Chr4:51340772-51340791	None:intergenic	60.0%
	ACCGCGAAGAAAGGAGCCGG+TGG	+	Chr4:51340768-51340787	MsG0480020970.01.T01:CDS	65.0%
	GGAGCCGGTGGAAGGAAAGG+AGG	+	Chr4:51340780-51340799	MsG0480020970.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	51340750	51341199	51340750	ID=MsG0480020970.01;Name=MsG0480020970.01
Chr4	mRNA	51340750	51341199	51340750	ID=MsG0480020970.01.T01;Parent=MsG0480020970.01;Name=MsG0480020970.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|149
Chr4	exon	51340750	51341199	51340750	ID=MsG0480020970.01.T01:exon:1085;Parent=MsG0480020970.01.T01
Chr4	CDS	51340750	51341199	51340750	ID=MsG0480020970.01.T01:cds;Parent=MsG0480020970.01.T01

Gene Sequence

>MsG0480020970.01.T01

ATGGACGCAAGCACCAAGACCGCGAAGAAAGGAGCCGGTGGAAGGAAAGGAGGACCAAGGAAGAAGTCGGTGACAAGATCAATCAGAGCCGGTCTTCAATTTCCAGTCGGAAGAATCGGTCGATACTTGAAGAAAGGAAGATACGCTCAGCGTGTTGGTACCGGTGCTCCAGTATACCTAGCAGCAGTTCTTGAATATCTTGCTGCTGAAGTTCTTGAATTGGCTGGAAATGCAGCACGTGATAACAAGAAGAATAGAATTATTCCAAGGCATGTGTTGTTGGCTGTTAGGAACGATGAAGAGCTTGGTAAATTACTTGCTGGTGTCACAATTGCTCATGGTGGTGTTCTTCCAAACATTAACCCAATCCTCTTGCCTAAGAAGACTGAAAAAGCTGCTCCTGCTAACAAAGAGCCAAAGAAGGCTGGAAAGTCTCCAAAGAAGGCTTAG

Protein sequence

>MsG0480020970.01.T01

MDASTKTAKKGAGGRKGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTEKAAPANKEPKKAGKSPKKA*