Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044028.01.T01 | AFK37334.1 | 95.413 | 218 | 10 | 0 | 1 | 218 | 19 | 236 | 7.96E-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044028.01.T01 | Q43675 | 53.535 | 198 | 79 | 4 | 13 | 204 | 68 | 258 | 9.81E-66 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044028.01.T01 | I3SAP2 | 95.413 | 218 | 10 | 0 | 1 | 218 | 19 | 236 | 3.80e-156 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001029.01 | MsG0880044028.01 | 0.824650 | 7.197181e-54 | 6.414603e-51 |
| MsG0880043997.01 | MsG0880044028.01 | 0.810537 | 1.097162e-50 | 6.630850e-48 |
| MsG0880044001.01 | MsG0880044028.01 | 0.953054 | 6.365436e-111 | 1.624399e-105 |
| MsG0880044026.01 | MsG0880044028.01 | 0.819688 | 1.018223e-52 | 7.890316e-50 |
| MsG0880044028.01 | MsG0880045801.01 | 0.849338 | 3.447621e-60 | 6.515390e-57 |
| MsG0880044028.01 | MsG0880046399.01 | 0.800008 | 1.762934e-48 | 8.119452e-46 |
| MsG0880044028.01 | MsG0880046434.01 | 0.839968 | 1.153271e-57 | 1.619124e-54 |
| MsG0880044028.01 | MsG0880046946.01 | 0.858054 | 1.071496e-62 | 2.699658e-59 |
| MsG0880044028.01 | MsG0880047312.01 | 0.809285 | 2.040605e-50 | 1.193247e-47 |
| MsG0880044028.01 | MsG0880047460.01 | 0.803369 | 3.602770e-49 | 1.807194e-46 |
| MsG0180003320.01 | MsG0880044028.01 | 0.802211 | 6.247724e-49 | 3.042730e-46 |
| MsG0180003600.01 | MsG0880044028.01 | 0.816222 | 6.181267e-52 | 4.354250e-49 |
| MsG0180005130.01 | MsG0880044028.01 | 0.845061 | 5.135600e-59 | 8.455899e-56 |
| MsG0180005143.01 | MsG0880044028.01 | 0.847337 | 1.232429e-59 | 2.183254e-56 |
| MsG0180006195.01 | MsG0880044028.01 | 0.829005 | 6.556095e-55 | 6.624585e-52 |
| MsG0680031200.01 | MsG0880044028.01 | 0.818806 | 1.617188e-52 | 1.222844e-49 |
| MsG0680034391.01 | MsG0880044028.01 | 0.803850 | 2.863442e-49 | 1.454316e-46 |
| MsG0480018692.01 | MsG0880044028.01 | 0.812183 | 4.818182e-51 | 3.042528e-48 |
| MsG0480018693.01 | MsG0880044028.01 | 0.833887 | 4.120267e-56 | 4.809663e-53 |
| MsG0480018697.01 | MsG0880044028.01 | 0.832704 | 8.120358e-56 | 9.148773e-53 |
| MsG0480019817.01 | MsG0880044028.01 | 0.800870 | 1.176378e-48 | 5.538079e-46 |
| MsG0480020285.01 | MsG0880044028.01 | 0.821794 | 3.341368e-53 | 2.745833e-50 |
| MsG0480021063.01 | MsG0880044028.01 | 0.812955 | 3.267252e-51 | 2.105740e-48 |
| MsG0480021067.01 | MsG0880044028.01 | 0.820271 | 7.491544e-53 | 5.900274e-50 |
| MsG0480021091.01 | MsG0880044028.01 | 0.856196 | 3.789123e-62 | 8.970872e-59 |
| MsG0580024535.01 | MsG0880044028.01 | 0.815415 | 9.354566e-52 | 6.445317e-49 |
| MsG0580026521.01 | MsG0880044028.01 | 0.801187 | 1.013274e-48 | 4.808611e-46 |
| MsG0580027751.01 | MsG0880044028.01 | 0.803478 | 3.419335e-49 | 1.720108e-46 |
| MsG0580028577.01 | MsG0880044028.01 | 0.810361 | 1.197879e-50 | 7.205824e-48 |
| MsG0280007513.01 | MsG0880044028.01 | 0.841014 | 6.143659e-58 | 8.908278e-55 |
| MsG0280007677.01 | MsG0880044028.01 | 0.832167 | 1.103218e-55 | 1.223137e-52 |
| MsG0280007869.01 | MsG0880044028.01 | 0.823133 | 1.632037e-53 | 1.393260e-50 |
| MsG0280007910.01 | MsG0880044028.01 | 0.822668 | 2.094144e-53 | 1.764362e-50 |
| MsG0280008180.01 | MsG0880044028.01 | 0.802047 | 6.751536e-49 | 3.274441e-46 |
| MsG0280010270.01 | MsG0880044028.01 | 0.809167 | 2.163584e-50 | 1.261164e-47 |
| MsG0780036835.01 | MsG0880044028.01 | 0.824740 | 6.853100e-54 | 6.123832e-51 |
| MsG0780038313.01 | MsG0880044028.01 | 0.805054 | 1.606379e-49 | 8.415288e-47 |
| MsG0780038318.01 | MsG0880044028.01 | 0.866070 | 3.730035e-65 | 1.240846e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044028.01.T01 | MTR_8g046000 | 95.413 | 218 | 10 | 0 | 1 | 218 | 19 | 236 | 1.20e-159 | 441 |
| MsG0880044028.01.T01 | MTR_8g045890 | 66.667 | 162 | 54 | 0 | 57 | 218 | 284 | 445 | 3.47e-76 | 236 |
| MsG0880044028.01.T01 | MTR_8g445140 | 50.820 | 244 | 68 | 4 | 13 | 204 | 59 | 302 | 1.12e-75 | 231 |
| MsG0880044028.01.T01 | MTR_8g045890 | 66.667 | 162 | 54 | 0 | 57 | 218 | 325 | 486 | 1.51e-75 | 236 |
| MsG0880044028.01.T01 | MTR_8g045890 | 66.667 | 162 | 54 | 0 | 57 | 218 | 362 | 523 | 3.26e-75 | 236 |
| MsG0880044028.01.T01 | MTR_8g445170 | 62.500 | 176 | 61 | 2 | 43 | 218 | 227 | 397 | 1.02e-74 | 231 |
| MsG0880044028.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 137 | 328 | 7.51e-74 | 227 |
| MsG0880044028.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 172 | 363 | 2.34e-73 | 226 |
| MsG0880044028.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 174 | 365 | 3.53e-73 | 226 |
| MsG0880044028.01.T01 | MTR_1g045860 | 56.667 | 210 | 78 | 6 | 13 | 218 | 69 | 269 | 4.11e-73 | 223 |
| MsG0880044028.01.T01 | MTR_2g081770 | 49.490 | 196 | 91 | 4 | 13 | 204 | 79 | 270 | 1.22e-60 | 191 |
| MsG0880044028.01.T01 | MTR_2g081610 | 45.918 | 196 | 97 | 3 | 11 | 204 | 71 | 259 | 9.70e-60 | 189 |
| MsG0880044028.01.T01 | MTR_2g081590 | 46.392 | 194 | 95 | 3 | 13 | 204 | 73 | 259 | 2.44e-57 | 182 |
| MsG0880044028.01.T01 | MTR_8g044290 | 61.224 | 147 | 57 | 0 | 35 | 181 | 197 | 343 | 6.21e-56 | 184 |
| MsG0880044028.01.T01 | MTR_3g109490 | 34.956 | 226 | 114 | 8 | 7 | 204 | 101 | 321 | 1.27e-34 | 125 |
| MsG0880044028.01.T01 | MTR_1g008460 | 35.681 | 213 | 111 | 7 | 12 | 203 | 88 | 295 | 1.36e-34 | 125 |
| MsG0880044028.01.T01 | MTR_1g008470 | 38.532 | 218 | 101 | 9 | 12 | 203 | 88 | 298 | 9.77e-34 | 122 |
| MsG0880044028.01.T01 | MTR_1g008590 | 38.073 | 218 | 103 | 9 | 12 | 203 | 112 | 323 | 4.85e-33 | 121 |
| MsG0880044028.01.T01 | MTR_0312s0030 | 38.073 | 218 | 103 | 9 | 12 | 203 | 112 | 323 | 8.56e-33 | 120 |
| MsG0880044028.01.T01 | MTR_1g007520 | 38.073 | 218 | 103 | 9 | 12 | 203 | 112 | 323 | 8.56e-33 | 120 |
| MsG0880044028.01.T01 | MTR_1g008560 | 37.500 | 216 | 110 | 8 | 12 | 203 | 114 | 328 | 8.36e-32 | 118 |
| MsG0880044028.01.T01 | MTR_1g008580 | 43.066 | 137 | 71 | 4 | 74 | 203 | 34 | 170 | 1.49e-31 | 113 |
| MsG0880044028.01.T01 | MTR_1g008510 | 37.963 | 216 | 105 | 9 | 12 | 203 | 114 | 324 | 1.85e-31 | 117 |
| MsG0880044028.01.T01 | MTR_1g008530 | 40.972 | 144 | 78 | 4 | 67 | 203 | 79 | 222 | 1.97e-31 | 114 |
| MsG0880044028.01.T01 | MTR_1g008500 | 35.000 | 220 | 109 | 8 | 12 | 203 | 170 | 383 | 5.07e-31 | 117 |
| MsG0880044028.01.T01 | MTR_1g008450 | 41.481 | 135 | 74 | 4 | 74 | 203 | 177 | 311 | 2.35e-26 | 103 |
| MsG0880044028.01.T01 | MTR_3g116270 | 31.193 | 218 | 124 | 7 | 13 | 206 | 292 | 507 | 8.74e-23 | 95.9 |
| MsG0880044028.01.T01 | MTR_3g116320 | 32.110 | 218 | 122 | 7 | 13 | 206 | 474 | 689 | 1.07e-22 | 95.9 |
| MsG0880044028.01.T01 | MTR_3g107830 | 39.865 | 148 | 79 | 5 | 67 | 204 | 108 | 255 | 1.91e-22 | 92.4 |
| MsG0880044028.01.T01 | MTR_4g069680 | 38.514 | 148 | 81 | 6 | 67 | 204 | 139 | 286 | 2.42e-20 | 87.4 |
| MsG0880044028.01.T01 | MTR_3g116410 | 38.514 | 148 | 81 | 5 | 67 | 204 | 128 | 275 | 8.42e-20 | 85.5 |
| MsG0880044028.01.T01 | MTR_4g069570 | 37.013 | 154 | 83 | 6 | 65 | 205 | 184 | 336 | 1.69e-18 | 82.8 |
| MsG0880044028.01.T01 | MTR_3g116380 | 35.065 | 154 | 90 | 6 | 61 | 205 | 151 | 303 | 3.68e-18 | 81.3 |
| MsG0880044028.01.T01 | MTR_4g069550 | 30.719 | 153 | 90 | 6 | 67 | 205 | 313 | 463 | 1.28e-12 | 66.6 |
| MsG0880044028.01.T01 | MTR_5g033350 | 30.968 | 155 | 96 | 5 | 57 | 202 | 46 | 198 | 2.68e-12 | 63.9 |
| MsG0880044028.01.T01 | MTR_4g133840 | 32.298 | 161 | 97 | 7 | 52 | 202 | 28 | 186 | 6.09e-12 | 62.4 |
| MsG0880044028.01.T01 | MTR_5g033340 | 30.968 | 155 | 96 | 5 | 57 | 202 | 225 | 377 | 1.04e-11 | 63.5 |
| MsG0880044028.01.T01 | MTR_4g069520 | 26.941 | 219 | 132 | 9 | 13 | 205 | 507 | 723 | 2.28e-11 | 63.2 |
| MsG0880044028.01.T01 | MTR_4g069520 | 26.941 | 219 | 132 | 9 | 13 | 205 | 493 | 709 | 2.84e-11 | 62.8 |
| MsG0880044028.01.T01 | MTR_4g068420 | 31.343 | 134 | 73 | 6 | 78 | 205 | 1 | 121 | 3.68e-11 | 58.9 |
| MsG0880044028.01.T01 | MTR_5g033330 | 30.323 | 155 | 97 | 5 | 57 | 202 | 464 | 616 | 5.76e-11 | 61.6 |
| MsG0880044028.01.T01 | MTR_6g086530 | 31.469 | 143 | 86 | 6 | 74 | 204 | 63 | 205 | 8.54e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044028.01.T01 | AT5G25610 | 37.946 | 224 | 109 | 9 | 7 | 203 | 170 | 390 | 3.21e-32 | 120 |
| MsG0880044028.01.T01 | AT1G70370 | 32.192 | 146 | 87 | 5 | 67 | 202 | 479 | 622 | 5.49e-13 | 67.8 |
| MsG0880044028.01.T01 | AT1G70370 | 32.192 | 146 | 87 | 5 | 67 | 202 | 479 | 622 | 5.49e-13 | 67.8 |
| MsG0880044028.01.T01 | AT1G49320 | 27.434 | 226 | 126 | 9 | 12 | 203 | 57 | 278 | 4.49e-12 | 64.3 |
Find 46 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATCAAGCAAATT+TGG | 0.152897 | 8:+34546001 | None:intergenic |
| GTTGAATATTGGAAAGCTTT+TGG | 0.243886 | 8:+34546440 | None:intergenic |
| ACGAAAATTAAGTCATATTC+AGG | 0.260765 | 8:-34546238 | MsG0880044028.01.T01:CDS |
| TGTTCGGAATGGTTGAATAT+TGG | 0.268442 | 8:+34546429 | None:intergenic |
| GGCAAATTCCTTCATTGATT+CGG | 0.336511 | 8:+34546276 | None:intergenic |
| AACTTACATGGTTCCATTGT+TGG | 0.360469 | 8:-34546086 | MsG0880044028.01.T01:CDS |
| GATTCACTTGCAACAGGAAT+AGG | 0.379182 | 8:+34545914 | None:intergenic |
| TGGCAGACTGGGATAGTTCC+AGG | 0.384913 | 8:+34545968 | None:intergenic |
| CAGCCTTGTTACCAACAAAA+TGG | 0.391110 | 8:+34545948 | None:intergenic |
| ATTCAACCATTCCGAACAAT+AGG | 0.392465 | 8:-34546424 | MsG0880044028.01.T01:CDS |
| TTTAATAATGCAGACATTGA+AGG | 0.399608 | 8:-34546517 | MsG0880044028.01.T01:CDS |
| GATTCATACCTCTTGTATCA+TGG | 0.417147 | 8:+34546023 | None:intergenic |
| ATATCCAAATATCATCTAGA+TGG | 0.433321 | 8:+34545874 | None:intergenic |
| TTACTTCTTCCACTACATAT+TGG | 0.433811 | 8:+34546194 | None:intergenic |
| GTTCCATTGTTGGCCTCTGA+TGG | 0.457551 | 8:-34546076 | MsG0880044028.01.T01:CDS |
| TATAGTCTTGACGAGATTTG+TGG | 0.471610 | 8:-34546343 | MsG0880044028.01.T01:CDS |
| TCATCAGATTCACTTGCAAC+AGG | 0.481559 | 8:+34545908 | None:intergenic |
| AACTTGTCTTCTCCGATAGC+AGG | 0.508034 | 8:+34546313 | None:intergenic |
| TTGGAAAATGACCTATACCC+TGG | 0.518567 | 8:-34546481 | MsG0880044028.01.T01:CDS |
| TCGGCAACCATCCTATTGTT+CGG | 0.521145 | 8:+34546413 | None:intergenic |
| AACCATCCTATTGTTCGGAA+TGG | 0.524994 | 8:+34546418 | None:intergenic |
| AACATCCTCCGAATCAATGA+AGG | 0.526354 | 8:-34546284 | MsG0880044028.01.T01:CDS |
| GAAGTTCTCAAAGTCAAGCC+TGG | 0.528095 | 8:-34545986 | MsG0880044028.01.T01:CDS |
| GAATTTGCCATTTCAAAACT+CGG | 0.533199 | 8:-34546262 | MsG0880044028.01.T01:CDS |
| AATTTGCCATTTCAAAACTC+GGG | 0.540236 | 8:-34546261 | MsG0880044028.01.T01:CDS |
| TTGGTAACAAGGCTGTTGCT+TGG | 0.540533 | 8:-34545940 | MsG0880044028.01.T01:CDS |
| TGTGGAGGTCCACCTGCTAT+CGG | 0.544677 | 8:-34546325 | MsG0880044028.01.T01:CDS |
| TACCAACAAAATGGCAGACT+GGG | 0.549171 | 8:+34545957 | None:intergenic |
| TTACCAACAAAATGGCAGAC+TGG | 0.565164 | 8:+34545956 | None:intergenic |
| TTGTTGATGCATTCACTTGG+TGG | 0.566717 | 8:+34546107 | None:intergenic |
| GAATGCATCAACAACTTACA+TGG | 0.567371 | 8:-34546098 | MsG0880044028.01.T01:CDS |
| AAATTCCTTCATTGATTCGG+AGG | 0.568883 | 8:+34546279 | None:intergenic |
| GTAAAGAAAATTGCAGACAA+AGG | 0.575220 | 8:-34546175 | MsG0880044028.01.T01:CDS |
| TGGAACTAAAGTTAATGCAT+TGG | 0.576995 | 8:-34546056 | MsG0880044028.01.T01:CDS |
| ATTAACTTTAGTTCCATCAG+AGG | 0.588740 | 8:+34546063 | None:intergenic |
| GTTCCATCAGAGGCCAACAA+TGG | 0.589021 | 8:+34546073 | None:intergenic |
| TTCTCCACTACATTTCCAGA+CGG | 0.593237 | 8:+34546373 | None:intergenic |
| AACCATTCCGAACAATAGGA+TGG | 0.593760 | 8:-34546420 | MsG0880044028.01.T01:CDS |
| AAATCAAGACCAATATGTAG+TGG | 0.595851 | 8:-34546203 | MsG0880044028.01.T01:CDS |
| AGTCTTGACGAGATTTGTGG+AGG | 0.619391 | 8:-34546340 | MsG0880044028.01.T01:CDS |
| TTGTCTTCTCCGATAGCAGG+TGG | 0.637131 | 8:+34546316 | None:intergenic |
| TCAACCGTCTGGAAATGTAG+TGG | 0.641252 | 8:-34546377 | MsG0880044028.01.T01:CDS |
| TACCCTGGCAAGAAAATGAG+CGG | 0.655096 | 8:-34546466 | MsG0880044028.01.T01:CDS |
| AAGTTGTTGATGCATTCACT+TGG | 0.662304 | 8:+34546104 | None:intergenic |
| GCTTGTCACCATGATACAAG+AGG | 0.667198 | 8:-34546031 | MsG0880044028.01.T01:CDS |
| AATATCATCTAGATGGCACA+AGG | 0.675245 | 8:+34545881 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACGAAAATTAAGTCATATTC+AGG | - | Chr8:34546174-34546193 | MsG0880044028.01.T01:CDS | 25.0% |
| ! | TTTAATAATGCAGACATTGA+AGG | - | Chr8:34545895-34545914 | MsG0880044028.01.T01:CDS | 25.0% |
| AAATCAAGACCAATATGTAG+TGG | - | Chr8:34546209-34546228 | MsG0880044028.01.T01:CDS | 30.0% | |
| AGAACTTCATCAAGCAAATT+TGG | + | Chr8:34546414-34546433 | None:intergenic | 30.0% | |
| GTAAAGAAAATTGCAGACAA+AGG | - | Chr8:34546237-34546256 | MsG0880044028.01.T01:CDS | 30.0% | |
| TGGAACTAAAGTTAATGCAT+TGG | - | Chr8:34546356-34546375 | MsG0880044028.01.T01:CDS | 30.0% | |
| TTACTTCTTCCACTACATAT+TGG | + | Chr8:34546221-34546240 | None:intergenic | 30.0% | |
| ! | AATTTGCCATTTCAAAACTC+GGG | - | Chr8:34546151-34546170 | MsG0880044028.01.T01:CDS | 30.0% |
| ! | ATTAACTTTAGTTCCATCAG+AGG | + | Chr8:34546352-34546371 | None:intergenic | 30.0% |
| ! | GAATTTGCCATTTCAAAACT+CGG | - | Chr8:34546150-34546169 | MsG0880044028.01.T01:CDS | 30.0% |
| ! | GTTGAATATTGGAAAGCTTT+TGG | + | Chr8:34545975-34545994 | None:intergenic | 30.0% |
| ! | TGAAGGCAAATTACTCTTTT+TGG | - | Chr8:34545912-34545931 | MsG0880044028.01.T01:CDS | 30.0% |
| AACTTACATGGTTCCATTGT+TGG | - | Chr8:34546326-34546345 | MsG0880044028.01.T01:CDS | 35.0% | |
| AAGTTGTTGATGCATTCACT+TGG | + | Chr8:34546311-34546330 | None:intergenic | 35.0% | |
| ATTCAACCATTCCGAACAAT+AGG | - | Chr8:34545988-34546007 | MsG0880044028.01.T01:CDS | 35.0% | |
| GAATGCATCAACAACTTACA+TGG | - | Chr8:34546314-34546333 | MsG0880044028.01.T01:CDS | 35.0% | |
| GATTCATACCTCTTGTATCA+TGG | + | Chr8:34546392-34546411 | None:intergenic | 35.0% | |
| TGTTCGGAATGGTTGAATAT+TGG | + | Chr8:34545986-34546005 | None:intergenic | 35.0% | |
| ! | GGCAAATTCCTTCATTGATT+CGG | + | Chr8:34546139-34546158 | None:intergenic | 35.0% |
| ! | TATAGTCTTGACGAGATTTG+TGG | - | Chr8:34546069-34546088 | MsG0880044028.01.T01:CDS | 35.0% |
| !! | AAATTCCTTCATTGATTCGG+AGG | + | Chr8:34546136-34546155 | None:intergenic | 35.0% |
| AACATCCTCCGAATCAATGA+AGG | - | Chr8:34546128-34546147 | MsG0880044028.01.T01:CDS | 40.0% | |
| AACCATCCTATTGTTCGGAA+TGG | + | Chr8:34545997-34546016 | None:intergenic | 40.0% | |
| AACCATTCCGAACAATAGGA+TGG | - | Chr8:34545992-34546011 | MsG0880044028.01.T01:CDS | 40.0% | |
| GATTCACTTGCAACAGGAAT+AGG | + | Chr8:34546501-34546520 | None:intergenic | 40.0% | |
| TACCAACAAAATGGCAGACT+GGG | + | Chr8:34546458-34546477 | None:intergenic | 40.0% | |
| TCATCAGATTCACTTGCAAC+AGG | + | Chr8:34546507-34546526 | None:intergenic | 40.0% | |
| TTACCAACAAAATGGCAGAC+TGG | + | Chr8:34546459-34546478 | None:intergenic | 40.0% | |
| TTCTCCACTACATTTCCAGA+CGG | + | Chr8:34546042-34546061 | None:intergenic | 40.0% | |
| TTGGAAAATGACCTATACCC+TGG | - | Chr8:34545931-34545950 | MsG0880044028.01.T01:CDS | 40.0% | |
| TTGTTGATGCATTCACTTGG+TGG | + | Chr8:34546308-34546327 | None:intergenic | 40.0% | |
| ! | TCATTTTCTTGCCAGGGTAT+AGG | + | Chr8:34545945-34545964 | None:intergenic | 40.0% |
| !! | CAGCCTTGTTACCAACAAAA+TGG | + | Chr8:34546467-34546486 | None:intergenic | 40.0% |
| !!! | CTGCCATTTTGTTGGTAACA+AGG | - | Chr8:34546461-34546480 | MsG0880044028.01.T01:CDS | 40.0% |
| !!! | GGTTGAGTAGCTTTTTCGAT+CGG | + | Chr8:34546021-34546040 | None:intergenic | 40.0% |
| !!! | TTTCGTCCCGAGTTTTGAAA+TGG | + | Chr8:34546160-34546179 | None:intergenic | 40.0% |
| AACTTGTCTTCTCCGATAGC+AGG | + | Chr8:34546102-34546121 | None:intergenic | 45.0% | |
| AGTCTTGACGAGATTTGTGG+AGG | - | Chr8:34546072-34546091 | MsG0880044028.01.T01:CDS | 45.0% | |
| GAAAAAGCTACTCAACCGTC+TGG | - | Chr8:34546024-34546043 | MsG0880044028.01.T01:CDS | 45.0% | |
| GAAGTTCTCAAAGTCAAGCC+TGG | - | Chr8:34546426-34546445 | MsG0880044028.01.T01:CDS | 45.0% | |
| GCTTGTCACCATGATACAAG+AGG | - | Chr8:34546381-34546400 | MsG0880044028.01.T01:CDS | 45.0% | |
| TACCCTGGCAAGAAAATGAG+CGG | - | Chr8:34545946-34545965 | MsG0880044028.01.T01:CDS | 45.0% | |
| TCAACCGTCTGGAAATGTAG+TGG | - | Chr8:34546035-34546054 | MsG0880044028.01.T01:CDS | 45.0% | |
| TCGGCAACCATCCTATTGTT+CGG | + | Chr8:34546002-34546021 | None:intergenic | 45.0% | |
| ! | TTGGTAACAAGGCTGTTGCT+TGG | - | Chr8:34546472-34546491 | MsG0880044028.01.T01:CDS | 45.0% |
| !!! | ATCCCAGTCTGCCATTTTGT+TGG | - | Chr8:34546453-34546472 | MsG0880044028.01.T01:CDS | 45.0% |
| GTTCCATCAGAGGCCAACAA+TGG | + | Chr8:34546342-34546361 | None:intergenic | 50.0% | |
| TTGTCTTCTCCGATAGCAGG+TGG | + | Chr8:34546099-34546118 | None:intergenic | 50.0% | |
| ! | AGACCGCTCATTTTCTTGCC+AGG | + | Chr8:34545952-34545971 | None:intergenic | 50.0% |
| ! | GACCGCTCATTTTCTTGCCA+GGG | + | Chr8:34545951-34545970 | None:intergenic | 50.0% |
| ! | GTTCCATTGTTGGCCTCTGA+TGG | - | Chr8:34546336-34546355 | MsG0880044028.01.T01:CDS | 50.0% |
| TGGCAGACTGGGATAGTTCC+AGG | + | Chr8:34546447-34546466 | None:intergenic | 55.0% | |
| TGTGGAGGTCCACCTGCTAT+CGG | - | Chr8:34546087-34546106 | MsG0880044028.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 34545889 | 34546545 | 34545889 | ID=MsG0880044028.01;Name=MsG0880044028.01 |
| Chr8 | mRNA | 34545889 | 34546545 | 34545889 | ID=MsG0880044028.01.T01;Parent=MsG0880044028.01;Name=MsG0880044028.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|218 |
| Chr8 | exon | 34545889 | 34546545 | 34545889 | ID=MsG0880044028.01.T01:exon:3652;Parent=MsG0880044028.01.T01 |
| Chr8 | CDS | 34545889 | 34546545 | 34545889 | ID=MsG0880044028.01.T01:cds;Parent=MsG0880044028.01.T01 |
| Gene Sequence |
| Protein sequence |
