Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024535.01.T01 | XP_003611325.1 | 98.374 | 246 | 4 | 0 | 1 | 246 | 1 | 246 | 2.01E-162 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024535.01.T01 | Q9FGL2 | 79.352 | 247 | 50 | 1 | 1 | 246 | 1 | 247 | 1.77E-135 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024535.01.T01 | G7JXC6 | 98.374 | 246 | 4 | 0 | 1 | 246 | 1 | 246 | 9.59e-163 | 459 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0580024535.01 | -0.802849 | 4.615570e-49 | 2.284820e-46 |
| MsG0080049069.01 | MsG0580024535.01 | -0.810913 | 9.099138e-51 | 5.555146e-48 |
| MsG0180000129.01 | MsG0580024535.01 | -0.827802 | 1.279569e-54 | 1.248318e-51 |
| MsG0180000482.01 | MsG0580024535.01 | -0.822622 | 2.146932e-53 | 1.806596e-50 |
| MsG0180000599.01 | MsG0580024535.01 | -0.854467 | 1.207650e-61 | 2.699563e-58 |
| MsG0180002700.01 | MsG0580024535.01 | -0.855739 | 5.153639e-62 | 1.201809e-58 |
| MsG0180003320.01 | MsG0580024535.01 | 0.805649 | 1.205784e-49 | 6.413888e-47 |
| MsG0180003942.01 | MsG0580024535.01 | 0.814502 | 1.490955e-51 | 1.002225e-48 |
| MsG0180004106.01 | MsG0580024535.01 | -0.804733 | 1.875122e-49 | 9.742811e-47 |
| MsG0180004365.01 | MsG0580024535.01 | -0.800441 | 1.439292e-48 | 6.702268e-46 |
| MsG0180004734.01 | MsG0580024535.01 | 0.806134 | 9.533273e-50 | 5.134467e-47 |
| MsG0180005082.01 | MsG0580024535.01 | 0.800376 | 1.483918e-48 | 6.898823e-46 |
| MsG0180005130.01 | MsG0580024535.01 | 0.822795 | 1.957075e-53 | 1.654762e-50 |
| MsG0180005143.01 | MsG0580024535.01 | 0.818817 | 1.608400e-52 | 1.216562e-49 |
| MsG0180005391.01 | MsG0580024535.01 | -0.803743 | 3.014127e-49 | 1.526582e-46 |
| MsG0180005408.01 | MsG0580024535.01 | -0.809712 | 1.652626e-50 | 9.774194e-48 |
| MsG0180005964.01 | MsG0580024535.01 | -0.846425 | 2.190171e-59 | 3.768301e-56 |
| MsG0180006195.01 | MsG0580024535.01 | 0.826401 | 2.767906e-54 | 2.593129e-51 |
| MsG0280010569.01 | MsG0580024535.01 | -0.816916 | 4.320249e-52 | 3.101582e-49 |
| MsG0380012868.01 | MsG0580024535.01 | -0.835026 | 2.131420e-56 | 2.574321e-53 |
| MsG0480018850.01 | MsG0580024535.01 | -0.801902 | 7.231127e-49 | 3.494202e-46 |
| MsG0480021063.01 | MsG0580024535.01 | 0.848902 | 4.557192e-60 | 8.490865e-57 |
| MsG0480021067.01 | MsG0580024535.01 | 0.804310 | 2.296508e-49 | 1.180199e-46 |
| MsG0480021091.01 | MsG0580024535.01 | 0.873508 | 1.392329e-67 | 6.059156e-64 |
| MsG0480021377.01 | MsG0580024535.01 | -0.807272 | 5.481785e-50 | 3.040178e-47 |
| MsG0480022239.01 | MsG0580024535.01 | -0.841155 | 5.639618e-58 | 8.213544e-55 |
| MsG0480022240.01 | MsG0580024535.01 | -0.829043 | 6.417436e-55 | 6.491713e-52 |
| MsG0480022537.01 | MsG0580024535.01 | -0.823702 | 1.201625e-53 | 1.042557e-50 |
| MsG0480022918.01 | MsG0580024535.01 | -0.821491 | 3.924609e-53 | 3.197591e-50 |
| MsG0480023150.01 | MsG0580024535.01 | -0.858203 | 9.675913e-63 | 2.450062e-59 |
| MsG0480023348.01 | MsG0580024535.01 | 0.847966 | 8.272644e-60 | 1.495272e-56 |
| MsG0480023406.01 | MsG0580024535.01 | -0.824638 | 7.240989e-54 | 6.451745e-51 |
| MsG0480023553.01 | MsG0580024535.01 | -0.806533 | 7.855407e-50 | 4.274052e-47 |
| MsG0580024535.01 | MsG0580024930.01 | 0.810876 | 9.269253e-51 | 5.653363e-48 |
| MsG0580024535.01 | MsG0580025625.01 | -0.808342 | 3.246664e-50 | 1.851777e-47 |
| MsG0580024535.01 | MsG0580025686.01 | -0.800099 | 1.689132e-48 | 7.797677e-46 |
| MsG0580024535.01 | MsG0580028208.01 | -0.838212 | 3.289277e-57 | 4.375145e-54 |
| MsG0580024535.01 | MsG0580029414.01 | -0.841422 | 4.797809e-58 | 7.046802e-55 |
| MsG0580024535.01 | MsG0680030680.01 | -0.846909 | 1.614760e-59 | 2.821674e-56 |
| MsG0580024535.01 | MsG0680031702.01 | -0.886887 | 2.311666e-72 | 1.681361e-68 |
| MsG0580024535.01 | MsG0680033377.01 | -0.801925 | 7.155157e-49 | 3.459368e-46 |
| MsG0580024535.01 | MsG0680034064.01 | -0.820956 | 5.215944e-53 | 4.187312e-50 |
| MsG0580024535.01 | MsG0680034981.01 | 0.827057 | 1.930494e-54 | 1.843032e-51 |
| MsG0580024535.01 | MsG0680035707.01 | -0.814353 | 1.608685e-51 | 1.076919e-48 |
| MsG0580024535.01 | MsG0780035960.01 | -0.807867 | 4.097738e-50 | 2.307911e-47 |
| MsG0580024535.01 | MsG0780036260.01 | 0.854195 | 1.447117e-61 | 3.206648e-58 |
| MsG0580024535.01 | MsG0780036835.01 | 0.857243 | 1.863908e-62 | 4.570258e-59 |
| MsG0580024535.01 | MsG0780037052.01 | 0.801985 | 6.952229e-49 | 3.366361e-46 |
| MsG0580024535.01 | MsG0780037662.01 | -0.810935 | 8.998542e-51 | 5.497142e-48 |
| MsG0580024535.01 | MsG0780038318.01 | 0.833011 | 6.813959e-56 | 7.747787e-53 |
| MsG0580024535.01 | MsG0780038584.01 | 0.825352 | 4.913507e-54 | 4.467519e-51 |
| MsG0580024535.01 | MsG0780039161.01 | -0.814057 | 1.869760e-51 | 1.241702e-48 |
| MsG0580024535.01 | MsG0780039686.01 | 0.861243 | 1.176144e-63 | 3.306038e-60 |
| MsG0580024535.01 | MsG0780039975.01 | -0.803568 | 3.276538e-49 | 1.652151e-46 |
| MsG0580024535.01 | MsG0780040278.01 | -0.835716 | 1.427048e-56 | 1.759711e-53 |
| MsG0580024535.01 | MsG0780041015.01 | 0.812475 | 4.161414e-51 | 2.648630e-48 |
| MsG0580024535.01 | MsG0780041262.01 | -0.821468 | 3.974564e-53 | 3.236085e-50 |
| MsG0580024535.01 | MsG0780041747.01 | -0.807544 | 4.798561e-50 | 2.680085e-47 |
| MsG0580024535.01 | MsG0880042044.01 | -0.803402 | 3.545674e-49 | 1.780189e-46 |
| MsG0580024535.01 | MsG0880042086.01 | -0.832794 | 7.714985e-56 | 8.714967e-53 |
| MsG0580024535.01 | MsG0880042416.01 | -0.807285 | 5.445728e-50 | 3.021246e-47 |
| MsG0580024535.01 | MsG0880043107.01 | -0.827222 | 1.762459e-54 | 1.690814e-51 |
| MsG0580024535.01 | MsG0880043174.01 | -0.815510 | 8.909479e-52 | 6.155070e-49 |
| MsG0580024535.01 | MsG0880043829.01 | -0.824287 | 8.757012e-54 | 7.722677e-51 |
| MsG0580024535.01 | MsG0880044001.01 | 0.807842 | 4.149273e-50 | 2.335441e-47 |
| MsG0580024535.01 | MsG0880044028.01 | 0.815415 | 9.354566e-52 | 6.445317e-49 |
| MsG0580024535.01 | MsG0880044487.01 | -0.804531 | 2.065914e-49 | 1.067697e-46 |
| MsG0580024535.01 | MsG0880044538.01 | -0.817053 | 4.026212e-52 | 2.901417e-49 |
| MsG0580024535.01 | MsG0880045801.01 | 0.810149 | 1.330296e-50 | 7.958118e-48 |
| MsG0580024535.01 | MsG0880046200.01 | -0.817963 | 2.510097e-52 | 1.854442e-49 |
| MsG0580024535.01 | MsG0880046334.01 | 0.838831 | 2.276333e-57 | 3.085573e-54 |
| MsG0580024535.01 | MsG0880046434.01 | 0.891762 | 2.953638e-74 | 2.624104e-70 |
| MsG0580024535.01 | MsG0880046765.01 | -0.809899 | 1.506203e-50 | 8.951872e-48 |
| MsG0580024535.01 | MsG0880046946.01 | 0.850277 | 1.884412e-60 | 3.671680e-57 |
| MsG0580024535.01 | MsG0880047045.01 | -0.800803 | 1.213980e-48 | 5.705181e-46 |
| MsG0580024535.01 | MsG0880047152.01 | -0.803048 | 4.197236e-49 | 2.088161e-46 |
| MsG0580024535.01 | MsG0880047394.01 | -0.812877 | 3.399164e-51 | 2.186277e-48 |
| MsG0380015438.01 | MsG0580024535.01 | -0.816339 | 5.818562e-52 | 4.111993e-49 |
| MsG0380015847.01 | MsG0580024535.01 | 0.816575 | 5.152625e-52 | 3.664777e-49 |
| MsG0380015849.01 | MsG0580024535.01 | 0.823479 | 1.355212e-53 | 1.168219e-50 |
| MsG0380015891.01 | MsG0580024535.01 | -0.839040 | 2.009563e-57 | 2.741348e-54 |
| MsG0380016057.01 | MsG0580024535.01 | -0.803007 | 4.281544e-49 | 2.127775e-46 |
| MsG0380016425.01 | MsG0580024535.01 | 0.802909 | 4.484695e-49 | 2.223403e-46 |
| MsG0380016987.01 | MsG0580024535.01 | -0.802220 | 6.222133e-49 | 3.030925e-46 |
| MsG0380017087.01 | MsG0580024535.01 | -0.817423 | 3.323357e-52 | 2.419360e-49 |
| MsG0380017338.01 | MsG0580024535.01 | -0.817175 | 3.778643e-52 | 2.732043e-49 |
| MsG0380018037.01 | MsG0580024535.01 | -0.812125 | 4.960798e-51 | 3.127683e-48 |
| MsG0480018426.01 | MsG0580024535.01 | -0.811573 | 6.544158e-51 | 4.065271e-48 |
| MsG0280006914.01 | MsG0580024535.01 | -0.812467 | 4.178926e-51 | 2.659235e-48 |
| MsG0280007513.01 | MsG0580024535.01 | 0.901530 | 2.441484e-78 | 3.312355e-74 |
| MsG0280007910.01 | MsG0580024535.01 | 0.824798 | 6.640333e-54 | 5.943636e-51 |
| MsG0280008098.01 | MsG0580024535.01 | -0.845848 | 3.143228e-59 | 5.308648e-56 |
| MsG0280008419.01 | MsG0580024535.01 | -0.803315 | 3.697300e-49 | 1.852037e-46 |
| MsG0280008928.01 | MsG0580024535.01 | -0.818534 | 1.863916e-52 | 1.398954e-49 |
| MsG0280008929.01 | MsG0580024535.01 | -0.802292 | 6.012177e-49 | 2.934227e-46 |
| MsG0280009756.01 | MsG0580024535.01 | -0.827183 | 1.801079e-54 | 1.725925e-51 |
| MsG0280009953.01 | MsG0580024535.01 | -0.831633 | 1.494325e-55 | 1.631021e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480019955.01 | MsG0580024535.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024535.01.T01 | MTR_5g012810 | 98.374 | 246 | 4 | 0 | 1 | 246 | 1 | 246 | 2.43e-166 | 459 |
| MsG0580024535.01.T01 | MTR_8g013680 | 77.912 | 249 | 53 | 2 | 1 | 248 | 1 | 248 | 6.84e-131 | 370 |
| MsG0580024535.01.T01 | MTR_2g101370 | 75.820 | 244 | 58 | 1 | 4 | 246 | 5 | 248 | 8.94e-124 | 352 |
| MsG0580024535.01.T01 | MTR_4g063090 | 62.832 | 226 | 81 | 2 | 24 | 246 | 26 | 251 | 9.69e-91 | 268 |
| MsG0580024535.01.T01 | MTR_7g103030 | 62.195 | 246 | 93 | 0 | 3 | 248 | 5 | 250 | 1.67e-89 | 265 |
| MsG0580024535.01.T01 | MTR_1g115405 | 55.061 | 247 | 108 | 2 | 3 | 247 | 5 | 250 | 4.88e-89 | 264 |
| MsG0580024535.01.T01 | MTR_1g006490 | 54.393 | 239 | 104 | 3 | 1 | 238 | 1 | 235 | 1.80e-82 | 247 |
| MsG0580024535.01.T01 | MTR_7g023350 | 54.878 | 246 | 110 | 1 | 3 | 247 | 5 | 250 | 4.93e-79 | 238 |
| MsG0580024535.01.T01 | MTR_1g006590 | 52.610 | 249 | 110 | 5 | 1 | 246 | 1 | 244 | 3.15e-78 | 236 |
| MsG0580024535.01.T01 | MTR_1g077540 | 50.417 | 240 | 118 | 1 | 3 | 241 | 5 | 244 | 6.36e-78 | 236 |
| MsG0580024535.01.T01 | MTR_6g069040 | 53.333 | 240 | 111 | 1 | 3 | 241 | 5 | 244 | 9.60e-73 | 223 |
| MsG0580024535.01.T01 | MTR_2g060360 | 47.619 | 231 | 119 | 2 | 9 | 238 | 9 | 238 | 1.64e-68 | 212 |
| MsG0580024535.01.T01 | MTR_5g063930 | 38.462 | 247 | 134 | 8 | 8 | 248 | 26 | 260 | 2.90e-39 | 137 |
| MsG0580024535.01.T01 | MTR_2g094270 | 38.153 | 249 | 134 | 7 | 9 | 238 | 28 | 275 | 4.57e-39 | 137 |
| MsG0580024535.01.T01 | MTR_7g101190 | 39.738 | 229 | 121 | 5 | 19 | 231 | 39 | 266 | 2.16e-38 | 135 |
| MsG0580024535.01.T01 | MTR_4g059390 | 37.712 | 236 | 130 | 5 | 19 | 238 | 39 | 273 | 1.25e-36 | 131 |
| MsG0580024535.01.T01 | MTR_3g118010 | 40.092 | 217 | 115 | 5 | 19 | 223 | 37 | 250 | 1.42e-36 | 130 |
| MsG0580024535.01.T01 | MTR_3g070210 | 35.841 | 226 | 129 | 5 | 19 | 231 | 55 | 277 | 1.33e-31 | 118 |
| MsG0580024535.01.T01 | MTR_5g082070 | 36.283 | 226 | 128 | 5 | 19 | 231 | 55 | 277 | 8.89e-31 | 115 |
| MsG0580024535.01.T01 | MTR_2g094270 | 37.788 | 217 | 118 | 6 | 9 | 209 | 28 | 243 | 5.66e-30 | 113 |
| MsG0580024535.01.T01 | MTR_5g010150 | 37.611 | 226 | 125 | 6 | 19 | 231 | 52 | 274 | 1.12e-29 | 112 |
| MsG0580024535.01.T01 | MTR_4g415300 | 37.333 | 225 | 126 | 6 | 19 | 231 | 56 | 277 | 2.40e-29 | 112 |
| MsG0580024535.01.T01 | MTR_8g098375 | 36.726 | 226 | 127 | 7 | 19 | 231 | 52 | 274 | 2.93e-29 | 111 |
| MsG0580024535.01.T01 | MTR_2g017620 | 36.323 | 223 | 130 | 7 | 3 | 223 | 10 | 222 | 1.06e-27 | 107 |
| MsG0580024535.01.T01 | MTR_1g095070 | 39.548 | 177 | 94 | 4 | 67 | 231 | 25 | 200 | 1.14e-27 | 105 |
| MsG0580024535.01.T01 | MTR_2g017620 | 36.323 | 223 | 130 | 7 | 3 | 223 | 24 | 236 | 1.45e-27 | 107 |
| MsG0580024535.01.T01 | MTR_2g017660 | 34.583 | 240 | 140 | 8 | 14 | 249 | 34 | 260 | 7.33e-27 | 105 |
| MsG0580024535.01.T01 | MTR_2g017590 | 34.361 | 227 | 138 | 6 | 3 | 228 | 22 | 238 | 9.01e-27 | 104 |
| MsG0580024535.01.T01 | MTR_3g008920 | 36.170 | 235 | 136 | 7 | 15 | 247 | 22 | 244 | 1.15e-26 | 104 |
| MsG0580024535.01.T01 | MTR_4g084880 | 34.483 | 232 | 139 | 6 | 18 | 246 | 34 | 255 | 1.56e-26 | 104 |
| MsG0580024535.01.T01 | MTR_8g087710 | 32.068 | 237 | 144 | 6 | 14 | 246 | 34 | 257 | 2.59e-26 | 103 |
| MsG0580024535.01.T01 | MTR_5g079570 | 34.025 | 241 | 140 | 7 | 14 | 248 | 35 | 262 | 4.75e-26 | 102 |
| MsG0580024535.01.T01 | MTR_8g087720 | 32.780 | 241 | 148 | 5 | 10 | 246 | 26 | 256 | 2.51e-25 | 100 |
| MsG0580024535.01.T01 | MTR_7g010650 | 33.803 | 213 | 134 | 3 | 19 | 231 | 37 | 242 | 4.45e-25 | 100 |
| MsG0580024535.01.T01 | MTR_2g104940 | 35.266 | 207 | 115 | 5 | 23 | 223 | 84 | 277 | 9.68e-25 | 100 |
| MsG0580024535.01.T01 | MTR_4g006730 | 34.634 | 205 | 119 | 4 | 23 | 223 | 79 | 272 | 2.60e-24 | 99.0 |
| MsG0580024535.01.T01 | MTR_2g017610 | 32.609 | 230 | 144 | 7 | 18 | 246 | 37 | 256 | 1.01e-23 | 96.7 |
| MsG0580024535.01.T01 | MTR_3g070210 | 34.848 | 198 | 116 | 4 | 19 | 206 | 55 | 249 | 2.02e-23 | 96.3 |
| MsG0580024535.01.T01 | MTR_2g017570 | 32.174 | 230 | 145 | 7 | 18 | 246 | 37 | 256 | 3.32e-23 | 95.5 |
| MsG0580024535.01.T01 | MTR_1g070385 | 33.649 | 211 | 128 | 6 | 22 | 230 | 65 | 265 | 3.45e-23 | 98.6 |
| MsG0580024535.01.T01 | MTR_2g017620 | 41.333 | 150 | 83 | 4 | 76 | 223 | 9 | 155 | 8.54e-23 | 92.4 |
| MsG0580024535.01.T01 | MTR_1g097840 | 36.792 | 212 | 114 | 6 | 23 | 228 | 78 | 275 | 9.69e-23 | 94.7 |
| MsG0580024535.01.T01 | MTR_4g006630 | 33.673 | 196 | 115 | 4 | 32 | 223 | 1 | 185 | 1.61e-21 | 89.7 |
| MsG0580024535.01.T01 | MTR_4g006730 | 33.673 | 196 | 115 | 4 | 32 | 223 | 1 | 185 | 1.94e-21 | 89.4 |
| MsG0580024535.01.T01 | MTR_4g059390 | 35.928 | 167 | 97 | 3 | 19 | 176 | 39 | 204 | 3.66e-21 | 88.6 |
| MsG0580024535.01.T01 | MTR_1g095070 | 39.597 | 149 | 80 | 3 | 67 | 206 | 25 | 172 | 1.48e-20 | 86.7 |
| MsG0580024535.01.T01 | MTR_4g075570 | 32.129 | 249 | 137 | 8 | 11 | 237 | 43 | 281 | 5.20e-17 | 79.3 |
| MsG0580024535.01.T01 | MTR_3g070210 | 32.515 | 163 | 101 | 3 | 19 | 175 | 55 | 214 | 7.28e-17 | 77.0 |
| MsG0580024535.01.T01 | MTR_4g415300 | 35.028 | 177 | 105 | 5 | 19 | 190 | 56 | 227 | 1.10e-15 | 74.3 |
| MsG0580024535.01.T01 | MTR_5g010150 | 35.366 | 164 | 97 | 4 | 19 | 176 | 52 | 212 | 1.72e-15 | 73.6 |
| MsG0580024535.01.T01 | MTR_8g098375 | 32.934 | 167 | 103 | 4 | 19 | 179 | 52 | 215 | 2.59e-15 | 73.2 |
| MsG0580024535.01.T01 | MTR_4g075590 | 28.512 | 242 | 143 | 8 | 11 | 231 | 29 | 261 | 4.80e-13 | 67.8 |
| MsG0580024535.01.T01 | MTR_8g468730 | 39.604 | 101 | 41 | 4 | 143 | 242 | 8 | 89 | 1.28e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024535.01.T01 | AT5G47450 | 79.352 | 247 | 50 | 1 | 1 | 246 | 1 | 247 | 1.81e-136 | 384 |
| MsG0580024535.01.T01 | AT4G17340 | 82.400 | 250 | 43 | 1 | 1 | 249 | 1 | 250 | 4.66e-133 | 375 |
| MsG0580024535.01.T01 | AT3G16240 | 76.230 | 244 | 57 | 1 | 1 | 243 | 1 | 244 | 6.42e-129 | 365 |
| MsG0580024535.01.T01 | AT3G26520 | 64.069 | 231 | 82 | 1 | 7 | 236 | 10 | 240 | 2.76e-98 | 287 |
| MsG0580024535.01.T01 | AT2G36830 | 61.538 | 247 | 94 | 1 | 3 | 248 | 5 | 251 | 4.75e-98 | 287 |
| MsG0580024535.01.T01 | AT4G01470 | 55.466 | 247 | 107 | 2 | 3 | 246 | 5 | 251 | 7.17e-88 | 261 |
| MsG0580024535.01.T01 | AT1G73190 | 53.909 | 243 | 106 | 2 | 5 | 241 | 10 | 252 | 9.31e-77 | 233 |
| MsG0580024535.01.T01 | AT1G17810 | 53.600 | 250 | 110 | 2 | 5 | 248 | 10 | 259 | 1.11e-76 | 233 |
| MsG0580024535.01.T01 | AT2G25810 | 53.600 | 250 | 111 | 3 | 1 | 249 | 1 | 246 | 2.68e-75 | 229 |
| MsG0580024535.01.T01 | AT3G47440 | 46.218 | 238 | 125 | 3 | 1 | 236 | 4 | 240 | 2.09e-66 | 206 |
| MsG0580024535.01.T01 | AT5G60660 | 39.301 | 229 | 122 | 6 | 19 | 231 | 39 | 266 | 1.44e-37 | 133 |
| MsG0580024535.01.T01 | AT2G37170 | 38.492 | 252 | 136 | 8 | 9 | 242 | 25 | 275 | 1.87e-37 | 133 |
| MsG0580024535.01.T01 | AT2G37170 | 38.710 | 248 | 133 | 8 | 9 | 238 | 68 | 314 | 2.16e-37 | 134 |
| MsG0580024535.01.T01 | AT2G37180 | 38.272 | 243 | 133 | 6 | 19 | 245 | 37 | 278 | 4.87e-37 | 132 |
| MsG0580024535.01.T01 | AT4G35100 | 41.818 | 220 | 107 | 7 | 19 | 223 | 38 | 251 | 1.25e-36 | 130 |
| MsG0580024535.01.T01 | AT4G35100 | 41.818 | 220 | 107 | 7 | 19 | 223 | 38 | 251 | 1.25e-36 | 130 |
| MsG0580024535.01.T01 | AT3G53420 | 39.834 | 241 | 126 | 7 | 19 | 242 | 39 | 277 | 1.99e-36 | 130 |
| MsG0580024535.01.T01 | AT3G53420 | 39.834 | 241 | 126 | 7 | 19 | 242 | 39 | 277 | 1.99e-36 | 130 |
| MsG0580024535.01.T01 | AT3G54820 | 36.546 | 249 | 132 | 7 | 19 | 243 | 38 | 284 | 3.87e-36 | 129 |
| MsG0580024535.01.T01 | AT2G39010 | 36.214 | 243 | 132 | 6 | 11 | 231 | 24 | 265 | 3.21e-35 | 127 |
| MsG0580024535.01.T01 | AT2G16850 | 40.092 | 217 | 115 | 5 | 19 | 223 | 36 | 249 | 3.50e-34 | 124 |
| MsG0580024535.01.T01 | AT4G00430 | 37.778 | 225 | 125 | 5 | 19 | 231 | 53 | 274 | 7.02e-31 | 116 |
| MsG0580024535.01.T01 | AT4G23400 | 37.333 | 225 | 126 | 5 | 19 | 231 | 53 | 274 | 1.13e-30 | 115 |
| MsG0580024535.01.T01 | AT3G61430 | 36.889 | 225 | 127 | 5 | 19 | 231 | 52 | 273 | 1.19e-30 | 115 |
| MsG0580024535.01.T01 | AT3G61430 | 36.889 | 225 | 127 | 5 | 19 | 231 | 52 | 273 | 1.19e-30 | 115 |
| MsG0580024535.01.T01 | AT1G01620 | 37.333 | 225 | 126 | 5 | 19 | 231 | 52 | 273 | 3.12e-30 | 114 |
| MsG0580024535.01.T01 | AT1G52180 | 60.674 | 89 | 35 | 0 | 123 | 211 | 34 | 122 | 9.81e-30 | 108 |
| MsG0580024535.01.T01 | AT2G45960 | 36.000 | 225 | 129 | 5 | 19 | 231 | 52 | 273 | 1.60e-29 | 112 |
| MsG0580024535.01.T01 | AT1G01620 | 39.153 | 189 | 102 | 4 | 55 | 231 | 14 | 201 | 1.10e-26 | 103 |
| MsG0580024535.01.T01 | AT5G37810 | 34.348 | 230 | 138 | 6 | 19 | 246 | 43 | 261 | 1.94e-26 | 104 |
| MsG0580024535.01.T01 | AT4G19030 | 32.510 | 243 | 146 | 6 | 12 | 246 | 48 | 280 | 7.08e-26 | 103 |
| MsG0580024535.01.T01 | AT4G18910 | 33.745 | 243 | 143 | 7 | 12 | 246 | 45 | 277 | 1.99e-25 | 101 |
| MsG0580024535.01.T01 | AT5G37820 | 35.000 | 220 | 123 | 6 | 19 | 231 | 43 | 249 | 6.83e-25 | 100 |
| MsG0580024535.01.T01 | AT1G80760 | 32.609 | 230 | 136 | 5 | 23 | 246 | 84 | 300 | 7.61e-25 | 100 |
| MsG0580024535.01.T01 | AT5G37820 | 33.766 | 231 | 138 | 6 | 19 | 246 | 79 | 297 | 9.50e-25 | 100 |
| MsG0580024535.01.T01 | AT3G06100 | 32.314 | 229 | 149 | 3 | 6 | 234 | 33 | 255 | 9.92e-25 | 99.8 |
| MsG0580024535.01.T01 | AT1G31885 | 31.020 | 245 | 145 | 4 | 5 | 232 | 20 | 257 | 6.78e-24 | 98.2 |
| MsG0580024535.01.T01 | AT3G06100 | 33.333 | 213 | 136 | 3 | 22 | 234 | 1 | 207 | 3.43e-23 | 94.4 |
| MsG0580024535.01.T01 | AT2G45960 | 35.533 | 197 | 115 | 4 | 19 | 206 | 52 | 245 | 1.40e-21 | 91.3 |
| MsG0580024535.01.T01 | AT2G45960 | 35.533 | 197 | 115 | 4 | 19 | 206 | 52 | 245 | 1.89e-21 | 91.3 |
| MsG0580024535.01.T01 | AT4G10380 | 32.895 | 228 | 132 | 6 | 6 | 223 | 59 | 275 | 2.70e-21 | 90.9 |
| MsG0580024535.01.T01 | AT1G31885 | 32.857 | 210 | 126 | 3 | 31 | 232 | 1 | 203 | 7.12e-21 | 89.0 |
| MsG0580024535.01.T01 | AT2G39010 | 32.778 | 180 | 105 | 4 | 11 | 175 | 24 | 202 | 6.37e-19 | 82.8 |
| MsG0580024535.01.T01 | AT2G34390 | 32.159 | 227 | 138 | 6 | 13 | 231 | 42 | 260 | 4.01e-17 | 79.3 |
| MsG0580024535.01.T01 | AT2G34390 | 32.569 | 218 | 131 | 6 | 22 | 231 | 9 | 218 | 3.21e-16 | 75.9 |
| MsG0580024535.01.T01 | AT4G00430 | 35.404 | 161 | 96 | 3 | 19 | 174 | 53 | 210 | 1.50e-15 | 73.6 |
| MsG0580024535.01.T01 | AT3G06100 | 35.606 | 132 | 84 | 1 | 103 | 234 | 44 | 174 | 1.65e-15 | 73.2 |
Find 93 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCTATCTTCACCATTT+TGG | 0.165967 | 5:-6118672 | None:intergenic |
| GGCTTGGCTGGGTTGATTTA+TGG | 0.208743 | 5:+6120514 | MsG0580024535.01.T01:CDS |
| TTTCAAGTAAATTGCCAAAA+TGG | 0.224680 | 5:+6118658 | MsG0580024535.01.T01:exon |
| TTGCTGATAACTGGATCTAT+TGG | 0.258320 | 5:+6120470 | MsG0580024535.01.T01:CDS |
| TCCTAACTGGTCTCTTCTAT+TGG | 0.261693 | 5:+6119816 | MsG0580024535.01.T01:CDS |
| ATTTATGGTGACGTCTTTAT+TGG | 0.274341 | 5:+6120529 | MsG0580024535.01.T01:CDS |
| CACAGCAGCTGACCCCAAAA+AGG | 0.277234 | 5:+6120315 | MsG0580024535.01.T01:CDS |
| TTGAACCCAGCTGTTACTTT+TGG | 0.284387 | 5:+6119767 | MsG0580024535.01.T01:CDS |
| GCTTGCTGTCATGAACCTTT+TGG | 0.293239 | 5:+6120642 | MsG0580024535.01.T01:three_prime_UTR |
| ACCATTGCACCGATTGCTAT+TGG | 0.294639 | 5:+6120349 | MsG0580024535.01.T01:CDS |
| GTGGAAACTTTGCTGATAAC+TGG | 0.301786 | 5:+6120461 | MsG0580024535.01.T01:CDS |
| TTTGAGATTATCATAACATT+TGG | 0.330146 | 5:+6120271 | MsG0580024535.01.T01:CDS |
| TCAAACACTAATCCAGCAAT+AGG | 0.335099 | 5:-6120253 | None:intergenic |
| ACCTGAGATGTTTGCTGCTA+TGG | 0.342340 | 5:-6119738 | None:intergenic |
| CTGATAGGAGGAGGCTTGGC+TGG | 0.348453 | 5:+6120502 | MsG0580024535.01.T01:CDS |
| ATGAACCCGGCTCGCTCATT+CGG | 0.368228 | 5:+6120424 | MsG0580024535.01.T01:CDS |
| CCATTGCACCGATTGCTATT+GGG | 0.370396 | 5:+6120350 | MsG0580024535.01.T01:CDS |
| TAATTAACGGAAGACTAATT+AGG | 0.371184 | 5:-6118621 | None:intergenic |
| TGCTGATAACTGGATCTATT+GGG | 0.375661 | 5:+6120471 | MsG0580024535.01.T01:CDS |
| AAAATGGTGAAGATAGGTTT+TGG | 0.375817 | 5:+6118674 | MsG0580024535.01.T01:exon |
| CATGCATTTGCACTATTTGT+TGG | 0.376412 | 5:+6119710 | MsG0580024535.01.T01:CDS |
| TATGTTTCAGATGCTGGTGC+TGG | 0.377613 | 5:-6120562 | None:intergenic |
| TATTGGATTGCCCAATTGCT+TGG | 0.382330 | 5:+6119833 | MsG0580024535.01.T01:CDS |
| CAACGATGGAGCCAAGCAAT+TGG | 0.397490 | 5:-6119844 | None:intergenic |
| CCAACCCATGGAGTGGCTGC+TGG | 0.411983 | 5:+6120223 | MsG0580024535.01.T01:CDS |
| TAAGGGTATGTTTCAGATGC+TGG | 0.414974 | 5:-6120568 | None:intergenic |
| GGCAACATCACCATCCTAAC+TGG | 0.420270 | 5:+6119803 | MsG0580024535.01.T01:CDS |
| TAAAATTGAATCATGGTTGT+TGG | 0.422441 | 5:+6120589 | MsG0580024535.01.T01:exon |
| GCTGGACTGAACCCTATTGC+TGG | 0.425119 | 5:+6120241 | MsG0580024535.01.T01:CDS |
| CTCTGATAGATAAGCCTTGA+GGG | 0.430449 | 5:-6118726 | None:intergenic |
| ATGTTTCAGATGCTGGTGCT+GGG | 0.433498 | 5:-6120561 | None:intergenic |
| CAAAGGAATTAGCTAATTAA+CGG | 0.444117 | 5:-6118634 | None:intergenic |
| CTTGGATCCAGCGGGTTTAG+TGG | 0.446191 | 5:+6119673 | MsG0580024535.01.T01:CDS |
| TTCGGCCCAGCTGTGGTTAG+TGG | 0.448499 | 5:+6120442 | MsG0580024535.01.T01:CDS |
| TCAGTCCAGCAGCCACTCCA+TGG | 0.457656 | 5:-6120228 | None:intergenic |
| CTGGGCCGAATGAGCGAGCC+GGG | 0.457837 | 5:-6120429 | None:intergenic |
| ATTGCCAAAATGGTGAAGAT+AGG | 0.457933 | 5:+6118668 | MsG0580024535.01.T01:exon |
| ATTGCTATTGGGTTCGTTGT+CGG | 0.459779 | 5:+6120361 | MsG0580024535.01.T01:CDS |
| AATTATAAAATTACGAATGA+AGG | 0.467654 | 5:+6120735 | MsG0580024535.01.T01:three_prime_UTR |
| TATTGGGTTGGACCACTGAT+AGG | 0.470155 | 5:+6120487 | MsG0580024535.01.T01:CDS |
| AAGTTTCCACTAACCACAGC+TGG | 0.477936 | 5:-6120448 | None:intergenic |
| GATTATCATAACATTTGGAT+TGG | 0.481301 | 5:+6120276 | MsG0580024535.01.T01:CDS |
| GCTAATCCAAAAGTAACAGC+TGG | 0.483137 | 5:-6119773 | None:intergenic |
| TTCATTGAACCTCCACTGAA+TGG | 0.492137 | 5:-6120406 | None:intergenic |
| GCCATAGCAGCAAACATCTC+AGG | 0.493649 | 5:+6119737 | MsG0580024535.01.T01:CDS |
| AACGATGGAGCCAAGCAATT+GGG | 0.495370 | 5:-6119843 | None:intergenic |
| ATACCCTTAAAATTGAATCA+TGG | 0.499958 | 5:+6120582 | MsG0580024535.01.T01:exon |
| CAAACACTAATCCAGCAATA+GGG | 0.503864 | 5:-6120252 | None:intergenic |
| TGAACAAGTTTAAGCTTGAA+AGG | 0.504042 | 5:-6120613 | None:intergenic |
| CACTAAACCCGCTGGATCCA+AGG | 0.511849 | 5:-6119672 | None:intergenic |
| TCTAACATCAGATGCAGCCT+TGG | 0.521701 | 5:+6119655 | MsG0580024535.01.T01:CDS |
| CCCAATAGCAATCGGTGCAA+TGG | 0.522337 | 5:-6120350 | None:intergenic |
| TGATAGGAGGAGGCTTGGCT+GGG | 0.524320 | 5:+6120503 | MsG0580024535.01.T01:CDS |
| GGCAATTTACTTGAAAACAA+AGG | 0.531006 | 5:-6118651 | None:intergenic |
| TTGCAGAGTGTTCCAACCCA+TGG | 0.540788 | 5:+6120211 | MsG0580024535.01.T01:intron |
| ATTTGCACTATTTGTTGGTG+TGG | 0.541154 | 5:+6119715 | MsG0580024535.01.T01:CDS |
| GCTGGGCCGAATGAGCGAGC+CGG | 0.544156 | 5:-6120430 | None:intergenic |
| CAGTGGAGGTTCAATGAACC+CGG | 0.550196 | 5:+6120411 | MsG0580024535.01.T01:CDS |
| CAGTCCAGCAGCCACTCCAT+GGG | 0.550781 | 5:-6120227 | None:intergenic |
| ACCACTGATAGGAGGAGGCT+TGG | 0.555392 | 5:+6120498 | MsG0580024535.01.T01:CDS |
| TACAATTTATTACAAGCAGC+GGG | 0.560033 | 5:-6120712 | None:intergenic |
| TGAACCTCCACTGAATGGAC+CGG | 0.561117 | 5:-6120401 | None:intergenic |
| CCAGCAGCCACTCCATGGGT+TGG | 0.562685 | 5:-6120223 | None:intergenic |
| TCCAATAGAAGAGACCAGTT+AGG | 0.566741 | 5:-6119817 | None:intergenic |
| ATTTAGCATTGCCTCCCTCA+AGG | 0.567116 | 5:+6118712 | MsG0580024535.01.T01:CDS |
| TCGCTCATTCGGCCCAGCTG+TGG | 0.568998 | 5:+6120435 | MsG0580024535.01.T01:CDS |
| ACAACGAACCCAATAGCAAT+CGG | 0.576808 | 5:-6120358 | None:intergenic |
| GCCAAGCCTCCTCCTATCAG+TGG | 0.579692 | 5:-6120499 | None:intergenic |
| GATAACTGGATCTATTGGGT+TGG | 0.583637 | 5:+6120475 | MsG0580024535.01.T01:CDS |
| CCTTAGCGGTGACATAATTG+AGG | 0.583882 | 5:-6119877 | None:intergenic |
| CCTCAATTATGTCACCGCTA+AGG | 0.583887 | 5:+6119877 | MsG0580024535.01.T01:CDS |
| GTTGGACCACTGATAGGAGG+AGG | 0.587094 | 5:+6120493 | MsG0580024535.01.T01:CDS |
| GATGCAGCCTTGGATCCAGC+GGG | 0.590239 | 5:+6119665 | MsG0580024535.01.T01:CDS |
| GCTACTGCCACTAAACCCGC+TGG | 0.595890 | 5:-6119680 | None:intergenic |
| GATGGTGATGTTGCCTCCAA+TGG | 0.596576 | 5:-6119795 | None:intergenic |
| ATAGAAGAGACCAGTTAGGA+TGG | 0.597084 | 5:-6119813 | None:intergenic |
| GGGTTTAGTGGCAGTAGCTG+TGG | 0.598717 | 5:+6119685 | MsG0580024535.01.T01:CDS |
| TTACAATTTATTACAAGCAG+CGG | 0.603382 | 5:-6120713 | None:intergenic |
| TGTTTCAGATGCTGGTGCTG+GGG | 0.605971 | 5:-6120560 | None:intergenic |
| TTAGCCGCCGGTCCATTCAG+TGG | 0.614841 | 5:+6120394 | MsG0580024535.01.T01:CDS |
| CTAATCCAAAAGTAACAGCT+GGG | 0.617109 | 5:-6119772 | None:intergenic |
| TGGGTTGGACCACTGATAGG+AGG | 0.621878 | 5:+6120490 | MsG0580024535.01.T01:CDS |
| GCCGCCGGTCCATTCAGTGG+AGG | 0.622801 | 5:+6120397 | MsG0580024535.01.T01:CDS |
| GGAGCTAACATCTTAGCCGC+CGG | 0.625071 | 5:+6120382 | MsG0580024535.01.T01:CDS |
| GAGGAGGAGACATGCAACGA+TGG | 0.629914 | 5:-6119858 | None:intergenic |
| AGATGCAGCCTTGGATCCAG+CGG | 0.648942 | 5:+6119664 | MsG0580024535.01.T01:CDS |
| ACTCTGATAGATAAGCCTTG+AGG | 0.651261 | 5:-6118727 | None:intergenic |
| ATAGCAGCAAACATCTCAGG+TGG | 0.653320 | 5:+6119740 | MsG0580024535.01.T01:CDS |
| AGTTTCCACTAACCACAGCT+GGG | 0.662001 | 5:-6120447 | None:intergenic |
| GAGTGTTCCAACCCATGGAG+TGG | 0.667041 | 5:+6120216 | MsG0580024535.01.T01:intron |
| TAGCGGTGACATAATTGAGG+AGG | 0.669128 | 5:-6119874 | None:intergenic |
| ACCTCCACTGAATGGACCGG+CGG | 0.670839 | 5:-6120398 | None:intergenic |
| TGATAGATAAGCCTTGAGGG+AGG | 0.684819 | 5:-6118723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTAATATATTATGT+TGG | + | Chr5:6120180-6120199 | MsG0580024535.01.T01:intron | 10.0% |
| !! | AAATGTTTGATAAATGATAA+CGG | + | Chr5:6119114-6119133 | MsG0580024535.01.T01:intron | 15.0% |
| !! | AATTATAAAATTACGAATGA+AGG | + | Chr5:6120735-6120754 | MsG0580024535.01.T01:three_prime_UTR | 15.0% |
| !! | TTCAATGATTTATTAATATG+TGG | - | Chr5:6120134-6120153 | None:intergenic | 15.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | + | Chr5:6119908-6119927 | MsG0580024535.01.T01:intron | 15.0% |
| !! | AAAATTATGCAAGAAATAAG+AGG | + | Chr5:6118883-6118902 | MsG0580024535.01.T01:intron | 20.0% |
| !! | AAAGAAAAAACAAAACCAAA+AGG | - | Chr5:6120660-6120679 | None:intergenic | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | + | Chr5:6119483-6119502 | MsG0580024535.01.T01:intron | 20.0% |
| !! | ACTACAATAAATTGCAATAT+TGG | + | Chr5:6119216-6119235 | MsG0580024535.01.T01:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | + | Chr5:6119585-6119604 | MsG0580024535.01.T01:intron | 20.0% |
| !!! | TCTATGAGATTTTCATAAAT+TGG | - | Chr5:6118942-6118961 | None:intergenic | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | + | Chr5:6120271-6120290 | MsG0580024535.01.T01:CDS | 20.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | Chr5:6119241-6119260 | MsG0580024535.01.T01:intron | 25.0% |
| ! | ATACCCTTAAAATTGAATCA+TGG | + | Chr5:6120582-6120601 | MsG0580024535.01.T01:exon | 25.0% |
| ! | CAAAGGAATTAGCTAATTAA+CGG | - | Chr5:6118637-6118656 | None:intergenic | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | + | Chr5:6120276-6120295 | MsG0580024535.01.T01:CDS | 25.0% |
| ! | TAAAATTGAATCATGGTTGT+TGG | + | Chr5:6120589-6120608 | MsG0580024535.01.T01:exon | 25.0% |
| ! | TAATTAACGGAAGACTAATT+AGG | - | Chr5:6118624-6118643 | None:intergenic | 25.0% |
| ! | TTACAATTTATTACAAGCAG+CGG | - | Chr5:6120716-6120735 | None:intergenic | 25.0% |
| !! | ACAACCATGATTCAATTTTA+AGG | - | Chr5:6120589-6120608 | None:intergenic | 25.0% |
| !! | CAACCATGATTCAATTTTAA+GGG | - | Chr5:6120588-6120607 | None:intergenic | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | - | Chr5:6119894-6119913 | None:intergenic | 25.0% |
| !! | TTTCAAGTAAATTGCCAAAA+TGG | + | Chr5:6118658-6118677 | MsG0580024535.01.T01:exon | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | + | Chr5:6119914-6119933 | MsG0580024535.01.T01:intron | 25.0% |
| AAATTGTTTCAGTCGAGATT+TGG | - | Chr5:6119987-6120006 | None:intergenic | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | + | Chr5:6119280-6119299 | MsG0580024535.01.T01:intron | 30.0% | |
| GGCAATTTACTTGAAAACAA+AGG | - | Chr5:6118654-6118673 | None:intergenic | 30.0% | |
| TACAATTTATTACAAGCAGC+GGG | - | Chr5:6120715-6120734 | None:intergenic | 30.0% | |
| TGAACAAGTTTAAGCTTGAA+AGG | - | Chr5:6120616-6120635 | None:intergenic | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | Chr5:6119265-6119284 | MsG0580024535.01.T01:intron | 30.0% | |
| TTACGTGAGACAAAATTTGA+AGG | + | Chr5:6119162-6119181 | MsG0580024535.01.T01:intron | 30.0% | |
| ! | AAAACCTATCTTCACCATTT+TGG | - | Chr5:6118675-6118694 | None:intergenic | 30.0% |
| ! | AAAATGGTGAAGATAGGTTT+TGG | + | Chr5:6118674-6118693 | MsG0580024535.01.T01:exon | 30.0% |
| ! | ATTTATGGTGACGTCTTTAT+TGG | + | Chr5:6120529-6120548 | MsG0580024535.01.T01:CDS | 30.0% |
| !! | AATAAGCTTTGTAGTTCTAG+AGG | + | Chr5:6118906-6118925 | MsG0580024535.01.T01:intron | 30.0% |
| !!! | TACATAATTTTAGGTTCAGG+TGG | + | Chr5:6119917-6119936 | MsG0580024535.01.T01:intron | 30.0% |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | - | Chr5:6120064-6120083 | None:intergenic | 30.0% |
| ATAAGCTTACATCAGATGGT+TGG | + | Chr5:6119245-6119264 | MsG0580024535.01.T01:intron | 35.0% | |
| ATTGCCAAAATGGTGAAGAT+AGG | + | Chr5:6118668-6118687 | MsG0580024535.01.T01:exon | 35.0% | |
| CAAACACTAATCCAGCAATA+GGG | - | Chr5:6120255-6120274 | None:intergenic | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | + | Chr5:6119710-6119729 | MsG0580024535.01.T01:CDS | 35.0% | |
| CTAATCCAAAAGTAACAGCT+GGG | - | Chr5:6119775-6119794 | None:intergenic | 35.0% | |
| GTAGAAGGAATGATGAAATG+TGG | + | Chr5:6119295-6119314 | MsG0580024535.01.T01:intron | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | - | Chr5:6120256-6120275 | None:intergenic | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | + | Chr5:6120471-6120490 | MsG0580024535.01.T01:CDS | 35.0% | |
| TTAGTTGAACTCCTGAACAT+CGG | + | Chr5:6120030-6120049 | MsG0580024535.01.T01:intron | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | + | Chr5:6120470-6120489 | MsG0580024535.01.T01:CDS | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | + | Chr5:6119715-6119734 | MsG0580024535.01.T01:CDS | 35.0% |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | Chr5:6119257-6119276 | MsG0580024535.01.T01:intron | 35.0% |
| !!! | CCTCCAGTTTTAAATGGAAA+GGG | - | Chr5:6120058-6120077 | None:intergenic | 35.0% |
| !!! | GGTTGATGACAAGTTGTTTT+GGG | + | Chr5:6119951-6119970 | MsG0580024535.01.T01:intron | 35.0% |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | + | Chr5:6119779-6119798 | MsG0580024535.01.T01:CDS | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | - | Chr5:6120059-6120078 | None:intergenic | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | + | Chr5:6119924-6119943 | MsG0580024535.01.T01:intron | 35.0% |
| ACAACGAACCCAATAGCAAT+CGG | - | Chr5:6120361-6120380 | None:intergenic | 40.0% | |
| ACTCTGATAGATAAGCCTTG+AGG | - | Chr5:6118730-6118749 | None:intergenic | 40.0% | |
| AGACGTGACATAAATGAGGT+TGG | - | Chr5:6119440-6119459 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | - | Chr5:6118759-6118778 | None:intergenic | 40.0% | |
| ATAGAAGAGACCAGTTAGGA+TGG | - | Chr5:6119816-6119835 | None:intergenic | 40.0% | |
| CTCTGATAGATAAGCCTTGA+GGG | - | Chr5:6118729-6118748 | None:intergenic | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | + | Chr5:6120475-6120494 | MsG0580024535.01.T01:CDS | 40.0% | |
| GCTAATCCAAAAGTAACAGC+TGG | - | Chr5:6119776-6119795 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | + | Chr5:6120461-6120480 | MsG0580024535.01.T01:CDS | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | + | Chr5:6119930-6119949 | MsG0580024535.01.T01:intron | 40.0% | |
| TAGTTGAACTCCTGAACATC+GGG | + | Chr5:6120031-6120050 | MsG0580024535.01.T01:intron | 40.0% | |
| TATTGGATTGCCCAATTGCT+TGG | + | Chr5:6119833-6119852 | MsG0580024535.01.T01:CDS | 40.0% | |
| TCCAATAGAAGAGACCAGTT+AGG | - | Chr5:6119820-6119839 | None:intergenic | 40.0% | |
| TTCATTGAACCTCCACTGAA+TGG | - | Chr5:6120409-6120428 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | + | Chr5:6118758-6118777 | MsG0580024535.01.T01:CDS | 40.0% |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | + | Chr5:6120361-6120380 | MsG0580024535.01.T01:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | + | Chr5:6118764-6118783 | MsG0580024535.01.T01:CDS | 40.0% |
| ! | CCCTTTCCATTTAAAACTGG+AGG | + | Chr5:6120055-6120074 | MsG0580024535.01.T01:intron | 40.0% |
| ! | GGACCCTTTCCATTTAAAAC+TGG | + | Chr5:6120052-6120071 | MsG0580024535.01.T01:intron | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | - | Chr5:6120331-6120350 | None:intergenic | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | - | Chr5:6120571-6120590 | None:intergenic | 40.0% |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | + | Chr5:6119816-6119835 | MsG0580024535.01.T01:CDS | 40.0% |
| ! | TCTGAGACGTGACATAAATG+AGG | - | Chr5:6119444-6119463 | None:intergenic | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | - | Chr5:6120330-6120349 | None:intergenic | 40.0% |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | + | Chr5:6119782-6119801 | MsG0580024535.01.T01:CDS | 40.0% |
| !!! | CGGTTGATGACAAGTTGTTT+TGG | + | Chr5:6119950-6119969 | MsG0580024535.01.T01:intron | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | + | Chr5:6119767-6119786 | MsG0580024535.01.T01:CDS | 40.0% |
| AACGATGGAGCCAAGCAATT+GGG | - | Chr5:6119846-6119865 | None:intergenic | 45.0% | |
| AAGTTTCCACTAACCACAGC+TGG | - | Chr5:6120451-6120470 | None:intergenic | 45.0% | |
| AGACGTGGCATAAATGAGGT+TGG | - | Chr5:6119071-6119090 | None:intergenic | 45.0% | |
| AGTTTCCACTAACCACAGCT+GGG | - | Chr5:6120450-6120469 | None:intergenic | 45.0% | |
| ATAGCAGCAAACATCTCAGG+TGG | + | Chr5:6119740-6119759 | MsG0580024535.01.T01:CDS | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | - | Chr5:6120564-6120583 | None:intergenic | 45.0% | |
| ATTTAGCATTGCCTCCCTCA+AGG | + | Chr5:6118712-6118731 | MsG0580024535.01.T01:CDS | 45.0% | |
| CCTCAATTATGTCACCGCTA+AGG | + | Chr5:6119877-6119896 | MsG0580024535.01.T01:CDS | 45.0% | |
| CCTTAGCGGTGACATAATTG+AGG | - | Chr5:6119880-6119899 | None:intergenic | 45.0% | |
| TAGCGGTGACATAATTGAGG+AGG | - | Chr5:6119877-6119896 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | - | Chr5:6120565-6120584 | None:intergenic | 45.0% | |
| TCTAACATCAGATGCAGCCT+TGG | + | Chr5:6119655-6119674 | MsG0580024535.01.T01:CDS | 45.0% | |
| TGATAGATAAGCCTTGAGGG+AGG | - | Chr5:6118726-6118745 | None:intergenic | 45.0% | |
| TTTCAGTCGAGATTTGGCCT+CGG | - | Chr5:6119981-6120000 | None:intergenic | 45.0% | |
| ! | AAACACACATGTCTGAGACG+TGG | - | Chr5:6119086-6119105 | None:intergenic | 45.0% |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | - | Chr5:6119741-6119760 | None:intergenic | 45.0% |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | - | Chr5:6120332-6120351 | None:intergenic | 45.0% |
| ! | TCTGAGACGTGGCATAAATG+AGG | - | Chr5:6119075-6119094 | None:intergenic | 45.0% |
| !! | ACCATTGCACCGATTGCTAT+TGG | + | Chr5:6120349-6120368 | MsG0580024535.01.T01:CDS | 45.0% |
| !! | CCATTGCACCGATTGCTATT+GGG | + | Chr5:6120350-6120369 | MsG0580024535.01.T01:CDS | 45.0% |
| !! | TATTGGGTTGGACCACTGAT+AGG | + | Chr5:6120487-6120506 | MsG0580024535.01.T01:CDS | 45.0% |
| !!! | GCTTGCTGTCATGAACCTTT+TGG | + | Chr5:6120642-6120661 | MsG0580024535.01.T01:three_prime_UTR | 45.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | + | Chr5:6120316-6120335 | MsG0580024535.01.T01:CDS | 50.0% | |
| CAACGATGGAGCCAAGCAAT+TGG | - | Chr5:6119847-6119866 | None:intergenic | 50.0% | |
| CAGTGGAGGTTCAATGAACC+CGG | + | Chr5:6120411-6120430 | MsG0580024535.01.T01:CDS | 50.0% | |
| CCCAATAGCAATCGGTGCAA+TGG | - | Chr5:6120353-6120372 | None:intergenic | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | + | Chr5:6120325-6120344 | MsG0580024535.01.T01:CDS | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | + | Chr5:6119737-6119756 | MsG0580024535.01.T01:CDS | 50.0% | |
| GGCAACATCACCATCCTAAC+TGG | + | Chr5:6119803-6119822 | MsG0580024535.01.T01:CDS | 50.0% | |
| TGAACCTCCACTGAATGGAC+CGG | - | Chr5:6120404-6120423 | None:intergenic | 50.0% | |
| TTCAGTCGAGATTTGGCCTC+GGG | - | Chr5:6119980-6119999 | None:intergenic | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | - | Chr5:6119798-6119817 | None:intergenic | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | - | Chr5:6120563-6120582 | None:intergenic | 50.0% |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | + | Chr5:6120211-6120230 | MsG0580024535.01.T01:intron | 50.0% |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | + | Chr5:6120514-6120533 | MsG0580024535.01.T01:CDS | 50.0% |
| !!! | AAGTTGTTTTGGGAAGCCCG+AGG | + | Chr5:6119961-6119980 | MsG0580024535.01.T01:intron | 50.0% |
| ACCACTGATAGGAGGAGGCT+TGG | + | Chr5:6120498-6120517 | MsG0580024535.01.T01:CDS | 55.0% | |
| AGATGCAGCCTTGGATCCAG+CGG | + | Chr5:6119664-6119683 | MsG0580024535.01.T01:CDS | 55.0% | |
| CACAGCAGCTGACCCCAAAA+AGG | + | Chr5:6120315-6120334 | MsG0580024535.01.T01:CDS | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | - | Chr5:6119675-6119694 | None:intergenic | 55.0% | |
| GAGGAGGAGACATGCAACGA+TGG | - | Chr5:6119861-6119880 | None:intergenic | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | + | Chr5:6120216-6120235 | MsG0580024535.01.T01:intron | 55.0% | |
| GCTGGACTGAACCCTATTGC+TGG | + | Chr5:6120241-6120260 | MsG0580024535.01.T01:CDS | 55.0% | |
| GGAGCTAACATCTTAGCCGC+CGG | + | Chr5:6120382-6120401 | MsG0580024535.01.T01:CDS | 55.0% | |
| GGGTTTAGTGGCAGTAGCTG+TGG | + | Chr5:6119685-6119704 | MsG0580024535.01.T01:CDS | 55.0% | |
| GTTGGACCACTGATAGGAGG+AGG | + | Chr5:6120493-6120512 | MsG0580024535.01.T01:CDS | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | + | Chr5:6120503-6120522 | MsG0580024535.01.T01:CDS | 55.0% | |
| TGGAAAGGGTCCCGATGTTC+AGG | - | Chr5:6120044-6120063 | None:intergenic | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+CGG | + | Chr5:6120424-6120443 | MsG0580024535.01.T01:CDS | 55.0% |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | + | Chr5:6119673-6119692 | MsG0580024535.01.T01:CDS | 55.0% |
| ! | TGGGTTGGACCACTGATAGG+AGG | + | Chr5:6120490-6120509 | MsG0580024535.01.T01:CDS | 55.0% |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | - | Chr5:6120317-6120336 | None:intergenic | 55.0% |
| ACCTCCACTGAATGGACCGG+CGG | - | Chr5:6120401-6120420 | None:intergenic | 60.0% | |
| CAGTCCAGCAGCCACTCCAT+GGG | - | Chr5:6120230-6120249 | None:intergenic | 60.0% | |
| CTGATAGGAGGAGGCTTGGC+TGG | + | Chr5:6120502-6120521 | MsG0580024535.01.T01:CDS | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | + | Chr5:6119665-6119684 | MsG0580024535.01.T01:CDS | 60.0% | |
| GCCAAGCCTCCTCCTATCAG+TGG | - | Chr5:6120502-6120521 | None:intergenic | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | - | Chr5:6119683-6119702 | None:intergenic | 60.0% | |
| TCAGTCCAGCAGCCACTCCA+TGG | - | Chr5:6120231-6120250 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | + | Chr5:6120394-6120413 | MsG0580024535.01.T01:CDS | 60.0% | |
| TTCGGCCCAGCTGTGGTTAG+TGG | + | Chr5:6120442-6120461 | MsG0580024535.01.T01:CDS | 60.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | + | Chr5:6120223-6120242 | MsG0580024535.01.T01:CDS | 65.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | - | Chr5:6120226-6120245 | None:intergenic | 65.0% | |
| TCGCTCATTCGGCCCAGCTG+TGG | + | Chr5:6120435-6120454 | MsG0580024535.01.T01:CDS | 65.0% | |
| CTGGGCCGAATGAGCGAGCC+GGG | - | Chr5:6120432-6120451 | None:intergenic | 70.0% | |
| GCCGCCGGTCCATTCAGTGG+AGG | + | Chr5:6120397-6120416 | MsG0580024535.01.T01:CDS | 70.0% | |
| GCTGGGCCGAATGAGCGAGC+CGG | - | Chr5:6120433-6120452 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 6118582 | 6120774 | 6118582 | ID=MsG0580024535.01;Name=MsG0580024535.01 |
| Chr5 | mRNA | 6118582 | 6120774 | 6118582 | ID=MsG0580024535.01.T01;Parent=MsG0580024535.01;Name=MsG0580024535.01.T01;_AED=0.27;_eAED=0.27;_QI=95|1|1|1|1|1|3|183|249 |
| Chr5 | exon | 6118582 | 6118803 | 6118582 | ID=MsG0580024535.01.T01:exon:19186;Parent=MsG0580024535.01.T01 |
| Chr5 | exon | 6119651 | 6119898 | 6119651 | ID=MsG0580024535.01.T01:exon:19187;Parent=MsG0580024535.01.T01 |
| Chr5 | exon | 6120217 | 6120774 | 6120217 | ID=MsG0580024535.01.T01:exon:19188;Parent=MsG0580024535.01.T01 |
| Chr5 | five_prime_UTR | 6118582 | 6118676 | 6118582 | ID=MsG0580024535.01.T01:five_prime_utr;Parent=MsG0580024535.01.T01 |
| Chr5 | CDS | 6118677 | 6118803 | 6118677 | ID=MsG0580024535.01.T01:cds;Parent=MsG0580024535.01.T01 |
| Chr5 | CDS | 6119651 | 6119898 | 6119651 | ID=MsG0580024535.01.T01:cds;Parent=MsG0580024535.01.T01 |
| Chr5 | CDS | 6120217 | 6120591 | 6120217 | ID=MsG0580024535.01.T01:cds;Parent=MsG0580024535.01.T01 |
| Chr5 | three_prime_UTR | 6120592 | 6120774 | 6120592 | ID=MsG0580024535.01.T01:three_prime_utr;Parent=MsG0580024535.01.T01 |
| Gene Sequence |
| Protein sequence |
