Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018692.01.T01 | XP_003604729.1 | 89.908 | 218 | 20 | 2 | 1 | 217 | 1 | 217 | 4.90E-132 | 380 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018692.01.T01 | Q9SFF9 | 59.447 | 217 | 82 | 3 | 4 | 215 | 5 | 220 | 7.12E-80 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018692.01.T01 | G7JQ50 | 89.908 | 218 | 20 | 2 | 1 | 217 | 1 | 217 | 2.34e-132 | 380 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000017.01 | MsG0480018692.01 | -0.805096 | 1.573945e-49 | 8.254196e-47 |
MsG0180000843.01 | MsG0480018692.01 | -0.807968 | 3.899880e-50 | 2.202404e-47 |
MsG0180001371.01 | MsG0480018692.01 | -0.804597 | 2.001625e-49 | 1.036262e-46 |
MsG0180001800.01 | MsG0480018692.01 | 0.808615 | 2.839522e-50 | 1.630984e-47 |
MsG0180003237.01 | MsG0480018692.01 | 0.811645 | 6.310745e-51 | 3.927552e-48 |
MsG0180003320.01 | MsG0480018692.01 | 0.801237 | 9.897667e-49 | 4.702965e-46 |
MsG0180003600.01 | MsG0480018692.01 | 0.827916 | 1.201074e-54 | 1.175767e-51 |
MsG0180004059.01 | MsG0480018692.01 | 0.821430 | 4.055768e-53 | 3.298890e-50 |
MsG0180004424.01 | MsG0480018692.01 | 0.863622 | 2.182229e-64 | 6.658315e-61 |
MsG0180004662.01 | MsG0480018692.01 | -0.816487 | 5.391217e-52 | 3.825089e-49 |
MsG0180005059.01 | MsG0480018692.01 | 0.817634 | 2.979438e-52 | 2.181407e-49 |
MsG0180005082.01 | MsG0480018692.01 | 0.823671 | 1.221576e-53 | 1.058880e-50 |
MsG0180005127.01 | MsG0480018692.01 | 0.812410 | 4.300413e-51 | 2.732369e-48 |
MsG0180005130.01 | MsG0480018692.01 | 0.887743 | 1.090717e-72 | 8.213149e-69 |
MsG0180005143.01 | MsG0480018692.01 | 0.886864 | 2.359127e-72 | 1.714193e-68 |
MsG0180005146.01 | MsG0480018692.01 | 0.814251 | 1.694615e-51 | 1.131316e-48 |
MsG0180005349.01 | MsG0480018692.01 | -0.806157 | 9.428598e-50 | 5.081154e-47 |
MsG0180006195.01 | MsG0480018692.01 | 0.814633 | 1.394993e-51 | 9.409784e-49 |
MsG0180006253.01 | MsG0480018692.01 | 0.842655 | 2.264783e-58 | 3.456978e-55 |
MsG0280010569.01 | MsG0480018692.01 | -0.805316 | 1.415750e-49 | 7.466649e-47 |
MsG0280010623.01 | MsG0480018692.01 | 0.854977 | 8.588260e-62 | 1.952570e-58 |
MsG0280010926.01 | MsG0480018692.01 | -0.827446 | 1.557273e-54 | 1.503846e-51 |
MsG0280011110.01 | MsG0480018692.01 | 0.810003 | 1.430783e-50 | 8.527133e-48 |
MsG0380011632.01 | MsG0480018692.01 | -0.803925 | 2.762699e-49 | 1.405892e-46 |
MsG0380013212.01 | MsG0480018692.01 | 0.861579 | 9.293020e-64 | 2.642097e-60 |
MsG0380013213.01 | MsG0480018692.01 | 0.867169 | 1.668277e-65 | 5.768067e-62 |
MsG0380013214.01 | MsG0480018692.01 | 0.804635 | 1.964737e-49 | 1.018167e-46 |
MsG0380013226.01 | MsG0480018692.01 | 0.822028 | 2.949315e-53 | 2.439720e-50 |
MsG0380013239.01 | MsG0480018692.01 | 0.811421 | 7.062318e-51 | 4.369647e-48 |
MsG0480018617.01 | MsG0480018692.01 | 0.849325 | 3.476842e-60 | 6.567873e-57 |
MsG0480018621.01 | MsG0480018692.01 | 0.842396 | 2.652789e-58 | 4.017321e-55 |
MsG0480018625.01 | MsG0480018692.01 | 0.812947 | 3.281149e-51 | 2.114291e-48 |
MsG0480018692.01 | MsG0480018693.01 | 0.907608 | 4.216048e-81 | 7.536841e-77 |
MsG0480018692.01 | MsG0480018697.01 | 0.927862 | 6.498051e-92 | 3.321219e-87 |
MsG0480018692.01 | MsG0480019322.01 | 0.845080 | 5.077084e-59 | 8.364493e-56 |
MsG0480018692.01 | MsG0480019325.01 | 0.850987 | 1.189731e-60 | 2.372975e-57 |
MsG0480018692.01 | MsG0480019346.01 | 0.863077 | 3.220370e-64 | 9.641121e-61 |
MsG0480018692.01 | MsG0480019348.01 | 0.842811 | 2.058883e-58 | 3.158099e-55 |
MsG0480018692.01 | MsG0480019592.01 | -0.803085 | 4.124448e-49 | 2.053831e-46 |
MsG0480018692.01 | MsG0480019817.01 | 0.800239 | 1.582201e-48 | 7.329982e-46 |
MsG0480018692.01 | MsG0480020285.01 | 0.847622 | 1.029143e-59 | 1.840033e-56 |
MsG0480018692.01 | MsG0480020350.01 | -0.800058 | 1.721762e-48 | 7.940086e-46 |
MsG0480018692.01 | MsG0480020704.01 | -0.807644 | 4.570036e-50 | 2.559040e-47 |
MsG0480018692.01 | MsG0480021063.01 | 0.838241 | 3.232806e-57 | 4.303543e-54 |
MsG0480018692.01 | MsG0480021091.01 | 0.815999 | 6.932055e-52 | 4.853378e-49 |
MsG0480018692.01 | MsG0480021133.01 | 0.816368 | 5.731690e-52 | 4.053783e-49 |
MsG0480018692.01 | MsG0480021168.01 | -0.804961 | 1.679840e-49 | 8.779495e-47 |
MsG0480018692.01 | MsG0480021406.01 | -0.816346 | 5.797642e-52 | 4.098065e-49 |
MsG0480018692.01 | MsG0480021817.01 | -0.804230 | 2.387300e-49 | 1.224265e-46 |
MsG0480018692.01 | MsG0580024649.01 | 0.819396 | 1.187229e-52 | 9.125020e-50 |
MsG0480018692.01 | MsG0580024782.01 | 0.848885 | 4.607484e-60 | 8.579630e-57 |
MsG0480018692.01 | MsG0580024944.01 | -0.821579 | 3.745612e-53 | 3.059236e-50 |
MsG0480018692.01 | MsG0580024994.01 | 0.815045 | 1.130533e-51 | 7.710901e-49 |
MsG0480018692.01 | MsG0580025007.01 | 0.832275 | 1.037385e-55 | 1.153766e-52 |
MsG0480018692.01 | MsG0580025024.01 | 0.875609 | 2.691848e-68 | 1.264934e-64 |
MsG0480018692.01 | MsG0580025097.01 | -0.821142 | 4.724216e-53 | 3.812041e-50 |
MsG0480018692.01 | MsG0580025193.01 | 0.835858 | 1.313596e-56 | 1.626658e-53 |
MsG0480018692.01 | MsG0580025252.01 | -0.804175 | 2.450327e-49 | 1.254881e-46 |
MsG0480018692.01 | MsG0580025413.01 | -0.828683 | 7.843615e-55 | 7.852018e-52 |
MsG0480018692.01 | MsG0580025960.01 | 0.804111 | 2.526839e-49 | 1.291960e-46 |
MsG0480018692.01 | MsG0580025965.01 | 0.815849 | 7.488772e-52 | 5.221265e-49 |
MsG0480018692.01 | MsG0580026521.01 | 0.815625 | 8.399478e-52 | 5.821248e-49 |
MsG0480018692.01 | MsG0580027751.01 | 0.851229 | 1.016892e-60 | 2.044397e-57 |
MsG0480018692.01 | MsG0580027752.01 | 0.851520 | 8.412106e-61 | 1.707140e-57 |
MsG0480018692.01 | MsG0580027753.01 | 0.855221 | 7.298012e-62 | 1.672551e-58 |
MsG0480018692.01 | MsG0580027776.01 | 0.843838 | 1.095311e-58 | 1.735433e-55 |
MsG0480018692.01 | MsG0580028306.01 | -0.802475 | 5.512092e-49 | 2.702632e-46 |
MsG0480018692.01 | MsG0580028495.01 | -0.820935 | 5.274108e-53 | 4.231308e-50 |
MsG0480018692.01 | MsG0580028587.01 | 0.824112 | 9.626656e-54 | 8.447829e-51 |
MsG0480018692.01 | MsG0580028925.01 | -0.811866 | 5.651805e-51 | 3.538230e-48 |
MsG0480018692.01 | MsG0580029291.01 | 0.810107 | 1.358708e-50 | 8.119564e-48 |
MsG0480018692.01 | MsG0580029682.01 | -0.810225 | 1.281347e-50 | 7.680124e-48 |
MsG0480018692.01 | MsG0580029937.01 | 0.832460 | 9.333693e-56 | 1.043937e-52 |
MsG0480018692.01 | MsG0580029938.01 | 0.839428 | 1.594368e-57 | 2.201218e-54 |
MsG0480018692.01 | MsG0580029967.01 | -0.810323 | 1.220192e-50 | 7.332836e-48 |
MsG0480018692.01 | MsG0680030379.01 | 0.865825 | 4.459461e-65 | 1.470805e-61 |
MsG0480018692.01 | MsG0680030380.01 | 0.838570 | 2.658761e-57 | 3.575509e-54 |
MsG0480018692.01 | MsG0680030382.01 | 0.854012 | 1.633550e-61 | 3.597752e-58 |
MsG0480018692.01 | MsG0680031200.01 | 0.814190 | 1.747957e-51 | 1.164993e-48 |
MsG0480018692.01 | MsG0680032026.01 | 0.834738 | 2.519305e-56 | 3.016324e-53 |
MsG0480018692.01 | MsG0680032413.01 | -0.807159 | 5.791969e-50 | 3.202668e-47 |
MsG0480018692.01 | MsG0680032461.01 | 0.872391 | 3.297438e-67 | 1.377484e-63 |
MsG0480018692.01 | MsG0680032932.01 | 0.803110 | 4.075813e-49 | 2.030944e-46 |
MsG0480018692.01 | MsG0680034238.01 | 0.803475 | 3.424354e-49 | 1.722473e-46 |
MsG0480018692.01 | MsG0680034391.01 | 0.811227 | 7.779831e-51 | 4.789005e-48 |
MsG0480018692.01 | MsG0680034969.01 | 0.809672 | 1.685288e-50 | 9.957001e-48 |
MsG0480018692.01 | MsG0680034974.01 | 0.836684 | 8.100492e-57 | 1.028409e-53 |
MsG0480018692.01 | MsG0680034978.01 | 0.803810 | 2.918655e-49 | 1.480756e-46 |
MsG0480018692.01 | MsG0680034980.01 | 0.827740 | 1.324118e-54 | 1.289521e-51 |
MsG0480018692.01 | MsG0680035344.01 | 0.802497 | 5.454969e-49 | 2.676077e-46 |
MsG0480018692.01 | MsG0680035664.01 | -0.824476 | 7.905197e-54 | 7.009529e-51 |
MsG0480018692.01 | MsG0780035932.01 | 0.835459 | 1.657749e-56 | 2.028419e-53 |
MsG0480018692.01 | MsG0780036259.01 | 0.801804 | 7.573033e-49 | 3.650295e-46 |
MsG0480018692.01 | MsG0780036260.01 | 0.826726 | 2.315871e-54 | 2.189698e-51 |
MsG0480018692.01 | MsG0780036376.01 | 0.859940 | 2.920197e-63 | 7.847102e-60 |
MsG0480018692.01 | MsG0780036649.01 | 0.811244 | 7.712062e-51 | 4.749430e-48 |
MsG0480018692.01 | MsG0780036839.01 | 0.801536 | 8.597973e-49 | 4.116240e-46 |
MsG0480018692.01 | MsG0780039686.01 | 0.814287 | 1.663675e-51 | 1.111766e-48 |
MsG0480018692.01 | MsG0780039986.01 | -0.812757 | 3.610208e-51 | 2.314761e-48 |
MsG0480018692.01 | MsG0780040278.01 | -0.805642 | 1.209378e-49 | 6.432005e-47 |
MsG0480018692.01 | MsG0780040615.01 | 0.808933 | 2.427467e-50 | 1.406061e-47 |
MsG0480018692.01 | MsG0780040670.01 | 0.806155 | 9.436157e-50 | 5.084946e-47 |
MsG0480018692.01 | MsG0780041004.01 | -0.808121 | 3.618931e-50 | 2.052029e-47 |
MsG0480018692.01 | MsG0780041442.01 | -0.800863 | 1.180447e-48 | 5.556224e-46 |
MsG0480018692.01 | MsG0780041447.01 | 0.817320 | 3.505221e-52 | 2.544390e-49 |
MsG0480018692.01 | MsG0780041706.01 | -0.800350 | 1.501997e-48 | 6.978236e-46 |
MsG0480018692.01 | MsG0780041778.01 | -0.806240 | 9.053248e-50 | 4.889394e-47 |
MsG0480018692.01 | MsG0880042642.01 | 0.839381 | 1.639085e-57 | 2.259748e-54 |
MsG0480018692.01 | MsG0880042728.01 | 0.817676 | 2.913738e-52 | 2.135844e-49 |
MsG0480018692.01 | MsG0880042876.01 | -0.826282 | 2.955745e-54 | 2.759645e-51 |
MsG0480018692.01 | MsG0880043250.01 | -0.808878 | 2.494762e-50 | 1.442919e-47 |
MsG0480018692.01 | MsG0880043459.01 | 0.851558 | 8.208301e-61 | 1.667826e-57 |
MsG0480018692.01 | MsG0880043870.01 | -0.800872 | 1.175502e-48 | 5.534149e-46 |
MsG0480018692.01 | MsG0880043997.01 | 0.835109 | 2.032177e-56 | 2.460401e-53 |
MsG0480018692.01 | MsG0880044001.01 | 0.826282 | 2.955455e-54 | 2.759393e-51 |
MsG0480018692.01 | MsG0880044026.01 | 0.837653 | 4.579390e-57 | 5.988768e-54 |
MsG0480018692.01 | MsG0880044028.01 | 0.812183 | 4.818182e-51 | 3.042528e-48 |
MsG0480018692.01 | MsG0880045801.01 | 0.833569 | 4.945157e-56 | 5.717235e-53 |
MsG0480018692.01 | MsG0880046038.01 | 0.802741 | 4.857747e-49 | 2.398079e-46 |
MsG0480018692.01 | MsG0880046166.01 | 0.801760 | 7.735180e-49 | 3.724041e-46 |
MsG0480018692.01 | MsG0880046324.01 | -0.821693 | 3.525517e-53 | 2.888888e-50 |
MsG0480018692.01 | MsG0880046402.01 | 0.805258 | 1.455857e-49 | 7.666381e-47 |
MsG0480018692.01 | MsG0880046403.01 | 0.822027 | 2.950601e-53 | 2.440725e-50 |
MsG0480018692.01 | MsG0880046434.01 | 0.802935 | 4.430674e-49 | 2.197948e-46 |
MsG0480018692.01 | MsG0880046870.01 | 0.802245 | 6.148865e-49 | 2.997262e-46 |
MsG0480018692.01 | MsG0880046923.01 | 0.809579 | 1.765173e-50 | 1.040315e-47 |
MsG0480018692.01 | MsG0880046946.01 | 0.815584 | 8.578366e-52 | 5.938052e-49 |
MsG0480018692.01 | MsG0880047259.01 | 0.830557 | 2.745682e-55 | 2.902764e-52 |
MsG0480018692.01 | MsG0880047312.01 | 0.866902 | 2.030266e-65 | 6.955968e-62 |
MsG0480018692.01 | MsG0880047460.01 | 0.855033 | 8.276387e-62 | 1.885140e-58 |
MsG0380015547.01 | MsG0480018692.01 | -0.813888 | 2.037789e-51 | 1.347130e-48 |
MsG0380015603.01 | MsG0480018692.01 | -0.801369 | 9.301894e-49 | 4.434638e-46 |
MsG0380015659.01 | MsG0480018692.01 | 0.850476 | 1.656337e-60 | 3.248432e-57 |
MsG0380016194.01 | MsG0480018692.01 | -0.815668 | 8.216156e-52 | 5.700601e-49 |
MsG0380016452.01 | MsG0480018692.01 | -0.804876 | 1.749836e-49 | 9.125830e-47 |
MsG0380016458.01 | MsG0480018692.01 | 0.843038 | 1.791009e-58 | 2.766774e-55 |
MsG0380016463.01 | MsG0480018692.01 | 0.814089 | 1.840157e-51 | 1.223059e-48 |
MsG0380016836.01 | MsG0480018692.01 | -0.813707 | 2.233146e-51 | 1.469057e-48 |
MsG0380017033.01 | MsG0480018692.01 | -0.801196 | 1.009438e-48 | 4.791296e-46 |
MsG0380017200.01 | MsG0480018692.01 | 0.837922 | 3.905995e-57 | 5.149881e-54 |
MsG0380017307.01 | MsG0480018692.01 | 0.800689 | 1.281259e-48 | 6.003868e-46 |
MsG0480018439.01 | MsG0480018692.01 | 0.814168 | 1.767034e-51 | 1.177010e-48 |
MsG0280007513.01 | MsG0480018692.01 | 0.843607 | 1.262916e-58 | 1.986559e-55 |
MsG0280007670.01 | MsG0480018692.01 | 0.802058 | 6.717881e-49 | 3.259056e-46 |
MsG0280007677.01 | MsG0480018692.01 | 0.878368 | 2.971448e-69 | 1.547509e-65 |
MsG0280007689.01 | MsG0480018692.01 | 0.824653 | 7.184680e-54 | 6.404251e-51 |
MsG0280007853.01 | MsG0480018692.01 | -0.803125 | 4.047227e-49 | 2.017468e-46 |
MsG0280007869.01 | MsG0480018692.01 | 0.839009 | 2.047270e-57 | 2.790272e-54 |
MsG0280007874.01 | MsG0480018692.01 | 0.823188 | 1.584851e-53 | 1.355002e-50 |
MsG0280007910.01 | MsG0480018692.01 | 0.829001 | 6.570551e-55 | 6.638411e-52 |
MsG0280008178.01 | MsG0480018692.01 | 0.850435 | 1.701088e-60 | 3.332075e-57 |
MsG0280008180.01 | MsG0480018692.01 | 0.834835 | 2.382028e-56 | 2.860640e-53 |
MsG0280008287.01 | MsG0480018692.01 | 0.800133 | 1.662850e-48 | 7.682970e-46 |
MsG0280008309.01 | MsG0480018692.01 | -0.817747 | 2.808740e-52 | 2.062972e-49 |
MsG0280009253.01 | MsG0480018692.01 | 0.812883 | 3.388652e-51 | 2.179917e-48 |
MsG0280010270.01 | MsG0480018692.01 | 0.821665 | 3.578483e-53 | 2.929931e-50 |
MsG0280010425.01 | MsG0480018692.01 | 0.810546 | 1.092650e-50 | 6.604992e-48 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018692.01.T01 | MTR_5g046410 | 89.908 | 218 | 20 | 2 | 1 | 217 | 1 | 217 | 5.93e-136 | 380 |
MsG0480018692.01.T01 | MTR_5g046430 | 89.908 | 218 | 20 | 2 | 1 | 217 | 1 | 217 | 5.93e-136 | 380 |
MsG0480018692.01.T01 | MTR_4g017030 | 89.908 | 218 | 20 | 2 | 1 | 217 | 1 | 217 | 5.93e-136 | 380 |
MsG0480018692.01.T01 | MTR_4g017050 | 89.450 | 218 | 21 | 2 | 1 | 217 | 1 | 217 | 2.11e-135 | 379 |
MsG0480018692.01.T01 | MTR_2g019250 | 88.991 | 218 | 22 | 2 | 1 | 217 | 1 | 217 | 6.26e-135 | 378 |
MsG0480018692.01.T01 | MTR_4g017040 | 87.615 | 218 | 25 | 2 | 1 | 217 | 1 | 217 | 7.46e-133 | 373 |
MsG0480018692.01.T01 | MTR_1g079490 | 72.222 | 216 | 59 | 1 | 1 | 215 | 1 | 216 | 9.85e-108 | 309 |
MsG0480018692.01.T01 | MTR_6g005310 | 69.340 | 212 | 63 | 2 | 4 | 215 | 5 | 214 | 1.85e-96 | 281 |
MsG0480018692.01.T01 | MTR_6g005330 | 68.981 | 216 | 64 | 3 | 1 | 215 | 1 | 214 | 2.46e-96 | 280 |
MsG0480018692.01.T01 | MTR_6g005340 | 69.340 | 212 | 63 | 2 | 4 | 215 | 5 | 214 | 3.77e-96 | 280 |
MsG0480018692.01.T01 | MTR_6g005360 | 66.977 | 215 | 70 | 1 | 1 | 215 | 1 | 214 | 7.85e-96 | 279 |
MsG0480018692.01.T01 | MTR_6g005380 | 57.143 | 210 | 86 | 4 | 1 | 208 | 1 | 208 | 1.01e-72 | 220 |
MsG0480018692.01.T01 | MTR_6g005350 | 57.277 | 213 | 88 | 3 | 3 | 215 | 4 | 213 | 3.06e-71 | 216 |
MsG0480018692.01.T01 | MTR_2g030855 | 62.791 | 172 | 59 | 3 | 47 | 215 | 42 | 211 | 4.64e-70 | 213 |
MsG0480018692.01.T01 | MTR_1g023770 | 61.453 | 179 | 66 | 2 | 39 | 215 | 31 | 208 | 6.38e-70 | 213 |
MsG0480018692.01.T01 | MTR_2g030895 | 61.850 | 173 | 60 | 4 | 47 | 215 | 7 | 177 | 4.54e-68 | 207 |
MsG0480018692.01.T01 | MTR_2g031270 | 62.209 | 172 | 60 | 3 | 47 | 215 | 43 | 212 | 1.42e-67 | 207 |
MsG0480018692.01.T01 | MTR_2g030865 | 61.850 | 173 | 60 | 4 | 47 | 215 | 7 | 177 | 1.90e-67 | 206 |
MsG0480018692.01.T01 | MTR_2g031300 | 52.047 | 171 | 57 | 4 | 47 | 214 | 7 | 155 | 7.22e-48 | 155 |
MsG0480018692.01.T01 | MTR_1g085500 | 45.355 | 183 | 94 | 3 | 35 | 215 | 35 | 213 | 1.16e-47 | 156 |
MsG0480018692.01.T01 | MTR_7g111240 | 45.506 | 178 | 92 | 2 | 40 | 215 | 36 | 210 | 5.30e-43 | 144 |
MsG0480018692.01.T01 | MTR_7g111240 | 46.023 | 176 | 90 | 2 | 42 | 215 | 35 | 207 | 1.13e-42 | 143 |
MsG0480018692.01.T01 | MTR_1g085140 | 43.750 | 176 | 94 | 2 | 42 | 215 | 42 | 214 | 1.26e-42 | 144 |
MsG0480018692.01.T01 | MTR_5g036570 | 42.778 | 180 | 97 | 3 | 39 | 215 | 42 | 218 | 3.35e-39 | 135 |
MsG0480018692.01.T01 | MTR_2g041550 | 44.767 | 172 | 88 | 3 | 44 | 213 | 37 | 203 | 1.33e-38 | 133 |
MsG0480018692.01.T01 | MTR_1g112200 | 41.899 | 179 | 80 | 5 | 47 | 215 | 42 | 206 | 2.94e-36 | 127 |
MsG0480018692.01.T01 | MTR_2g041570 | 36.620 | 213 | 118 | 5 | 4 | 214 | 7 | 204 | 1.78e-33 | 120 |
MsG0480018692.01.T01 | MTR_2g041580 | 36.792 | 212 | 117 | 5 | 4 | 213 | 7 | 203 | 1.96e-33 | 120 |
MsG0480018692.01.T01 | MTR_1g060120 | 38.235 | 170 | 99 | 3 | 47 | 215 | 56 | 220 | 3.48e-33 | 119 |
MsG0480018692.01.T01 | MTR_8g007300 | 39.130 | 184 | 99 | 4 | 34 | 215 | 38 | 210 | 1.21e-30 | 113 |
MsG0480018692.01.T01 | MTR_8g020750 | 42.667 | 150 | 80 | 2 | 43 | 190 | 39 | 184 | 1.79e-30 | 112 |
MsG0480018692.01.T01 | MTR_8g020590 | 39.655 | 174 | 98 | 4 | 43 | 214 | 34 | 202 | 3.28e-29 | 108 |
MsG0480018692.01.T01 | MTR_3g019710 | 40.385 | 156 | 87 | 3 | 43 | 197 | 37 | 187 | 2.06e-26 | 101 |
MsG0480018692.01.T01 | MTR_8g020630 | 39.855 | 138 | 78 | 2 | 43 | 179 | 37 | 170 | 2.13e-26 | 101 |
MsG0480018692.01.T01 | MTR_8g020650 | 39.855 | 138 | 78 | 2 | 43 | 179 | 37 | 170 | 7.27e-26 | 100 |
MsG0480018692.01.T01 | MTR_2g086620 | 41.221 | 131 | 71 | 3 | 85 | 214 | 77 | 202 | 9.31e-26 | 99.8 |
MsG0480018692.01.T01 | MTR_4g052780 | 42.308 | 130 | 69 | 3 | 86 | 214 | 79 | 203 | 2.83e-25 | 98.6 |
MsG0480018692.01.T01 | MTR_2g086630 | 40.458 | 131 | 72 | 3 | 85 | 214 | 77 | 202 | 2.86e-25 | 98.6 |
MsG0480018692.01.T01 | MTR_2g086640 | 40.458 | 131 | 72 | 3 | 85 | 214 | 76 | 201 | 3.38e-25 | 98.6 |
MsG0480018692.01.T01 | MTR_4g052770 | 42.308 | 130 | 69 | 3 | 86 | 214 | 79 | 203 | 5.18e-25 | 97.8 |
MsG0480018692.01.T01 | MTR_2g045100 | 40.441 | 136 | 76 | 2 | 43 | 177 | 37 | 168 | 8.45e-25 | 97.4 |
MsG0480018692.01.T01 | MTR_2g036120 | 41.176 | 136 | 75 | 2 | 43 | 177 | 37 | 168 | 1.51e-24 | 96.7 |
MsG0480018692.01.T01 | MTR_8g020770 | 42.105 | 133 | 70 | 2 | 47 | 176 | 42 | 170 | 1.58e-24 | 97.1 |
MsG0480018692.01.T01 | MTR_3g019650 | 38.462 | 156 | 90 | 3 | 43 | 197 | 36 | 186 | 5.24e-24 | 95.5 |
MsG0480018692.01.T01 | MTR_3g019680 | 38.462 | 156 | 90 | 3 | 43 | 197 | 36 | 186 | 1.38e-23 | 94.4 |
MsG0480018692.01.T01 | MTR_8g020670 | 38.686 | 137 | 79 | 2 | 44 | 179 | 38 | 170 | 1.92e-23 | 94.0 |
MsG0480018692.01.T01 | MTR_3g096330 | 40.411 | 146 | 81 | 3 | 36 | 179 | 591 | 732 | 3.42e-23 | 97.8 |
MsG0480018692.01.T01 | MTR_8g020763 | 36.095 | 169 | 99 | 3 | 43 | 206 | 17 | 181 | 5.94e-23 | 92.0 |
MsG0480018692.01.T01 | MTR_4g010340 | 36.207 | 174 | 103 | 4 | 43 | 215 | 34 | 200 | 9.56e-23 | 92.0 |
MsG0480018692.01.T01 | MTR_2g044040 | 38.636 | 132 | 76 | 2 | 47 | 177 | 41 | 168 | 1.32e-22 | 91.7 |
MsG0480018692.01.T01 | MTR_0284s0010 | 34.434 | 212 | 121 | 5 | 1 | 206 | 1 | 200 | 1.94e-22 | 91.3 |
MsG0480018692.01.T01 | MTR_8g020610 | 36.095 | 169 | 99 | 5 | 47 | 213 | 39 | 200 | 2.98e-22 | 90.9 |
MsG0480018692.01.T01 | MTR_8g020760 | 33.333 | 219 | 129 | 5 | 1 | 215 | 1 | 206 | 3.98e-21 | 87.8 |
MsG0480018692.01.T01 | MTR_5g031460 | 34.911 | 169 | 102 | 3 | 42 | 206 | 36 | 200 | 8.44e-21 | 87.0 |
MsG0480018692.01.T01 | MTR_7g011340 | 35.714 | 168 | 100 | 3 | 43 | 206 | 37 | 200 | 1.18e-19 | 84.0 |
MsG0480018692.01.T01 | MTR_3g073170 | 34.524 | 168 | 99 | 4 | 43 | 206 | 41 | 201 | 2.48e-19 | 83.2 |
MsG0480018692.01.T01 | MTR_2g019780 | 32.184 | 174 | 108 | 4 | 43 | 215 | 43 | 207 | 3.55e-18 | 80.1 |
MsG0480018692.01.T01 | MTR_2g030915 | 48.611 | 72 | 22 | 1 | 97 | 168 | 5 | 61 | 1.12e-15 | 70.5 |
MsG0480018692.01.T01 | MTR_4g027415 | 36.697 | 109 | 64 | 2 | 44 | 151 | 38 | 142 | 3.90e-12 | 62.0 |
MsG0480018692.01.T01 | MTR_3g019810 | 31.068 | 206 | 118 | 8 | 1 | 202 | 107 | 292 | 4.07e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018692.01.T01 | AT3G05950 | 59.447 | 217 | 82 | 3 | 4 | 215 | 5 | 220 | 7.25e-81 | 241 |
MsG0480018692.01.T01 | AT5G39160 | 57.895 | 209 | 85 | 2 | 9 | 215 | 11 | 218 | 5.31e-76 | 229 |
MsG0480018692.01.T01 | AT5G39190 | 57.895 | 209 | 85 | 2 | 9 | 215 | 11 | 218 | 7.36e-76 | 228 |
MsG0480018692.01.T01 | AT5G39130 | 56.938 | 209 | 87 | 2 | 9 | 215 | 11 | 218 | 1.50e-75 | 228 |
MsG0480018692.01.T01 | AT5G39120 | 57.075 | 212 | 86 | 4 | 7 | 215 | 9 | 218 | 1.56e-75 | 228 |
MsG0480018692.01.T01 | AT5G39150 | 56.164 | 219 | 91 | 4 | 1 | 215 | 1 | 218 | 1.56e-75 | 228 |
MsG0480018692.01.T01 | AT5G39180 | 56.164 | 219 | 91 | 4 | 1 | 215 | 1 | 218 | 3.04e-75 | 227 |
MsG0480018692.01.T01 | AT5G39110 | 57.075 | 212 | 87 | 3 | 7 | 215 | 9 | 219 | 4.41e-75 | 226 |
MsG0480018692.01.T01 | AT4G14630 | 55.909 | 220 | 91 | 4 | 1 | 215 | 3 | 221 | 2.14e-72 | 219 |
MsG0480018692.01.T01 | AT5G39160 | 55.981 | 209 | 85 | 2 | 9 | 215 | 11 | 214 | 4.70e-72 | 219 |
MsG0480018692.01.T01 | AT3G04200 | 54.884 | 215 | 94 | 3 | 1 | 213 | 6 | 219 | 1.64e-71 | 218 |
MsG0480018692.01.T01 | AT5G38940 | 55.385 | 195 | 84 | 2 | 23 | 215 | 27 | 220 | 3.01e-66 | 204 |
MsG0480018692.01.T01 | AT5G38940 | 55.385 | 195 | 84 | 2 | 23 | 215 | 51 | 244 | 4.36e-66 | 204 |
MsG0480018692.01.T01 | AT5G39190 | 65.563 | 151 | 52 | 0 | 65 | 215 | 46 | 196 | 7.94e-66 | 202 |
MsG0480018692.01.T01 | AT5G39160 | 65.563 | 151 | 52 | 0 | 65 | 215 | 46 | 196 | 8.20e-66 | 202 |
MsG0480018692.01.T01 | AT5G38930 | 56.410 | 195 | 82 | 2 | 23 | 215 | 27 | 220 | 1.04e-65 | 202 |
MsG0480018692.01.T01 | AT5G38910 | 55.656 | 221 | 89 | 6 | 1 | 215 | 1 | 218 | 7.18e-65 | 201 |
MsG0480018692.01.T01 | AT5G38960 | 55.941 | 202 | 85 | 3 | 17 | 215 | 21 | 221 | 1.20e-64 | 200 |
MsG0480018692.01.T01 | AT3G04190 | 51.244 | 201 | 95 | 2 | 15 | 213 | 19 | 218 | 1.01e-62 | 195 |
MsG0480018692.01.T01 | AT3G04150 | 49.309 | 217 | 104 | 3 | 3 | 214 | 4 | 219 | 4.13e-62 | 194 |
MsG0480018692.01.T01 | AT3G04170 | 50.725 | 207 | 96 | 3 | 10 | 214 | 14 | 216 | 1.51e-61 | 192 |
MsG0480018692.01.T01 | AT3G04150 | 54.802 | 177 | 78 | 1 | 40 | 214 | 56 | 232 | 5.66e-60 | 189 |
MsG0480018692.01.T01 | AT3G04180 | 49.254 | 201 | 99 | 2 | 15 | 213 | 19 | 218 | 1.25e-59 | 187 |
MsG0480018692.01.T01 | AT1G02335 | 43.750 | 176 | 94 | 2 | 42 | 215 | 42 | 214 | 3.98e-44 | 147 |
MsG0480018692.01.T01 | AT1G09560 | 44.318 | 176 | 93 | 2 | 42 | 215 | 42 | 214 | 1.08e-43 | 146 |
MsG0480018692.01.T01 | AT5G26700 | 47.305 | 167 | 76 | 4 | 42 | 204 | 39 | 197 | 3.90e-43 | 145 |
MsG0480018692.01.T01 | AT1G18970 | 44.886 | 176 | 90 | 3 | 42 | 215 | 47 | 217 | 7.40e-43 | 144 |
MsG0480018692.01.T01 | AT3G62020 | 45.198 | 177 | 91 | 3 | 42 | 215 | 12 | 185 | 1.09e-42 | 143 |
MsG0480018692.01.T01 | AT3G05930 | 43.350 | 203 | 106 | 4 | 3 | 202 | 5 | 201 | 1.50e-42 | 143 |
MsG0480018692.01.T01 | AT3G62020 | 45.198 | 177 | 91 | 3 | 42 | 215 | 41 | 214 | 2.67e-42 | 143 |
MsG0480018692.01.T01 | AT5G38910 | 44.796 | 221 | 76 | 6 | 1 | 215 | 1 | 181 | 2.74e-41 | 139 |
MsG0480018692.01.T01 | AT1G18980 | 44.318 | 176 | 91 | 3 | 42 | 215 | 47 | 217 | 8.78e-41 | 139 |
MsG0480018692.01.T01 | AT1G10460 | 40.782 | 179 | 99 | 4 | 40 | 214 | 38 | 213 | 1.52e-36 | 128 |
MsG0480018692.01.T01 | AT5G61750 | 43.791 | 153 | 81 | 2 | 36 | 186 | 33 | 182 | 5.11e-36 | 126 |
MsG0480018692.01.T01 | AT3G10080 | 40.000 | 170 | 96 | 3 | 47 | 215 | 54 | 218 | 6.88e-36 | 127 |
MsG0480018692.01.T01 | AT3G10080 | 40.000 | 170 | 96 | 3 | 47 | 215 | 125 | 289 | 3.48e-35 | 127 |
MsG0480018692.01.T01 | AT5G20630 | 38.571 | 210 | 117 | 7 | 1 | 208 | 1 | 200 | 7.45e-33 | 118 |
MsG0480018692.01.T01 | AT1G72610 | 40.116 | 172 | 96 | 5 | 44 | 213 | 35 | 201 | 4.98e-29 | 108 |
MsG0480018692.01.T01 | AT1G74820 | 35.829 | 187 | 108 | 4 | 31 | 215 | 48 | 224 | 2.74e-27 | 104 |
MsG0480018692.01.T01 | AT5G38950 | 54.167 | 72 | 33 | 0 | 145 | 216 | 2 | 73 | 1.00e-18 | 78.6 |
Find 62 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCAACTGAATGTTGGATA+TGG | 0.274546 | 4:-8662788 | MsG0480018692.01.T01:CDS |
CCTTGTTAGCATCTTGGCTT+TGG | 0.311083 | 4:-8663448 | MsG0480018692.01.T01:CDS |
TGAAAATGAATTAGACCAAT+TGG | 0.315504 | 4:+8662806 | None:intergenic |
ATATATACATACACCATCTT+TGG | 0.317006 | 4:+8663362 | None:intergenic |
TATATACATACACCATCTTT+GGG | 0.320376 | 4:+8663363 | None:intergenic |
CTTGTCAACTTGAAAAGCTT+TGG | 0.328967 | 4:+8662661 | None:intergenic |
TTGAGATCCTAGTGCATTAG+AGG | 0.333822 | 4:+8663057 | None:intergenic |
TTCCTCTAGGGTGGATGTGA+GGG | 0.379954 | 4:+8662942 | None:intergenic |
TCCTGTATGACAACAACTAT+TGG | 0.383407 | 4:-8662611 | MsG0480018692.01.T01:CDS |
GAGTGCCTTCGAGTACTATA+AGG | 0.397511 | 4:+8662912 | None:intergenic |
TAACACGCTTGGTATCTCTT+TGG | 0.399374 | 4:-8662999 | MsG0480018692.01.T01:CDS |
ATACTTCCTTGTTAGCATCT+TGG | 0.401215 | 4:-8663454 | MsG0480018692.01.T01:CDS |
GATGTCTTTGTGTTCCCAAT+TGG | 0.401977 | 4:-8662821 | MsG0480018692.01.T01:CDS |
TTCTTCAAACATGTTGAAGC+TGG | 0.402098 | 4:-8663085 | MsG0480018692.01.T01:CDS |
TCCAATAGTTGTTGTCATAC+AGG | 0.414842 | 4:+8662610 | None:intergenic |
TAAAGAGCCGGTTGTTGTCT+TGG | 0.425026 | 4:+8662864 | None:intergenic |
GGCAACGCGGTTGCTATCGC+TGG | 0.429748 | 4:-8662767 | MsG0480018692.01.T01:CDS |
CAAAAGTCTTGGAGAGGGCT+GGG | 0.429933 | 4:+8663400 | None:intergenic |
CTCGAAGGCACTCTTTATGT+TGG | 0.443268 | 4:-8662902 | MsG0480018692.01.T01:CDS |
TCTTCAGCTTTAACAAGTGC+GGG | 0.444792 | 4:+8663109 | None:intergenic |
GTCACTGTAGACCAACTATT+CGG | 0.448530 | 4:-8663025 | MsG0480018692.01.T01:CDS |
CATCAAACCAAGACAACAAC+CGG | 0.452231 | 4:-8662871 | MsG0480018692.01.T01:CDS |
GAAAATGAATTAGACCAATT+GGG | 0.461091 | 4:+8662807 | None:intergenic |
GTTCCTCTAGGGTGGATGTG+AGG | 0.464306 | 4:+8662941 | None:intergenic |
ATAAGGATCTCTGTTCCTCT+AGG | 0.468428 | 4:+8662929 | None:intergenic |
ACAAAAGTCTTGGAGAGGGC+TGG | 0.468953 | 4:+8663399 | None:intergenic |
TTTGCAACGGTGATAACTCC+TGG | 0.470922 | 4:+8662728 | None:intergenic |
TGATTGCAACACAAAAGTCT+TGG | 0.491107 | 4:+8663389 | None:intergenic |
ATAATTGCAGTATTTGTGAA+TGG | 0.498461 | 4:-8663148 | MsG0480018692.01.T01:intron |
TCTTCAAACATGTTGAAGCT+GGG | 0.501315 | 4:-8663084 | MsG0480018692.01.T01:CDS |
TCCTCTAGGGTGGATGTGAG+GGG | 0.509895 | 4:+8662943 | None:intergenic |
CTATTCGGACTTAACACGCT+TGG | 0.510323 | 4:-8663010 | MsG0480018692.01.T01:CDS |
AGAACTTCGTCGGAAATAAG+AGG | 0.511108 | 4:+8662686 | None:intergenic |
CCTCTAGGGTGGATGTGAGG+GGG | 0.524965 | 4:+8662944 | None:intergenic |
TAATTGCAGTATTTGTGAAT+GGG | 0.528576 | 4:-8663147 | MsG0480018692.01.T01:intron |
GAGGGCTGGGGTCAGAAGCA+AGG | 0.533272 | 4:+8663413 | None:intergenic |
GCGTGTTAAGTCCGAATAGT+TGG | 0.534502 | 4:+8663014 | None:intergenic |
ATCTTCAGCTTTAACAAGTG+CGG | 0.543612 | 4:+8663108 | None:intergenic |
CTTTACCAAGGTGCTCAACA+AGG | 0.544491 | 4:-8662846 | MsG0480018692.01.T01:CDS |
AGCTTTGGTAAGAACTTCGT+CGG | 0.555884 | 4:+8662676 | None:intergenic |
CCAAAGCCAAGATGCTAACA+AGG | 0.556137 | 4:+8663448 | None:intergenic |
GGTCAGAAGCAAGGCAAGAG+AGG | 0.559300 | 4:+8663422 | None:intergenic |
AAAAGTCTTGGAGAGGGCTG+GGG | 0.564168 | 4:+8663401 | None:intergenic |
AATAGTTGGTCTACAGTGAC+CGG | 0.566317 | 4:+8663028 | None:intergenic |
ATCACCCTTGTTGAGCACCT+TGG | 0.571487 | 4:+8662841 | None:intergenic |
TAAGGATCTCTGTTCCTCTA+GGG | 0.571738 | 4:+8662930 | None:intergenic |
GGACTTAGCAGTCAAAATCC+AGG | 0.578792 | 4:-8662746 | MsG0480018692.01.T01:CDS |
TGAGCACCTTGGTAAAGAGC+CGG | 0.579420 | 4:+8662852 | None:intergenic |
GGGAATGCCTCTAATGCACT+AGG | 0.589101 | 4:-8663064 | MsG0480018692.01.T01:CDS |
TTGCAATCAAACCCCAAAGA+TGG | 0.589705 | 4:-8663375 | MsG0480018692.01.T01:CDS |
GGATCTCTGTTCCTCTAGGG+TGG | 0.590427 | 4:+8662933 | None:intergenic |
TTTAAACAAAGCATTTGCAA+CGG | 0.590900 | 4:+8662715 | None:intergenic |
ACTAGGATCTCAAGTGACTC+CGG | 0.624129 | 4:-8663047 | MsG0480018692.01.T01:CDS |
ATATACATACACCATCTTTG+GGG | 0.631622 | 4:+8663364 | None:intergenic |
CAACACAAAAGTCTTGGAGA+GGG | 0.634245 | 4:+8663395 | None:intergenic |
GCAACACAAAAGTCTTGGAG+AGG | 0.651085 | 4:+8663394 | None:intergenic |
CCCTTAGGCACAAAATCACG+CGG | 0.660679 | 4:+8662974 | None:intergenic |
CTTCAGCTTTAACAAGTGCG+GGG | 0.662073 | 4:+8663110 | None:intergenic |
GAGATCCTTATAGTACTCGA+AGG | 0.666965 | 4:-8662917 | MsG0480018692.01.T01:CDS |
TTTACCAAGGTGCTCAACAA+GGG | 0.669433 | 4:-8662845 | MsG0480018692.01.T01:CDS |
CAACAACCGGCTCTTTACCA+AGG | 0.674974 | 4:-8662858 | MsG0480018692.01.T01:CDS |
GAATGTTGGATATGGCAACG+CGG | 0.840401 | 4:-8662780 | MsG0480018692.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTACAACTAAATTTTT+AGG | - | Chr4:8662740-8662759 | MsG0480018692.01.T01:CDS | 10.0% |
!! | TTTAAATATGCAAATATTAG+AGG | - | Chr4:8662763-8662782 | MsG0480018692.01.T01:CDS | 15.0% |
!! | GTAATTAACACTTAAAGTTA+AGG | + | Chr4:8662728-8662747 | None:intergenic | 20.0% |
!!! | CAATATAGAATCTTTTGTTT+TGG | - | Chr4:8662805-8662824 | MsG0480018692.01.T01:CDS | 20.0% |
! | ATAATTGCAGTATTTGTGAA+TGG | - | Chr4:8662915-8662934 | MsG0480018692.01.T01:CDS | 25.0% |
! | ATATATACATACACCATCTT+TGG | + | Chr4:8662704-8662723 | None:intergenic | 25.0% |
! | CAAAAGATTCTATATTGACA+AGG | + | Chr4:8662802-8662821 | None:intergenic | 25.0% |
! | GAAAATGAATTAGACCAATT+GGG | + | Chr4:8663259-8663278 | None:intergenic | 25.0% |
! | TAATTGCAGTATTTGTGAAT+GGG | - | Chr4:8662916-8662935 | MsG0480018692.01.T01:CDS | 25.0% |
! | TATATACATACACCATCTTT+GGG | + | Chr4:8662703-8662722 | None:intergenic | 25.0% |
! | TGAAAATGAATTAGACCAAT+TGG | + | Chr4:8663260-8663279 | None:intergenic | 25.0% |
!! | ATTCATTTTCAACTGAATGT+TGG | - | Chr4:8663269-8663288 | MsG0480018692.01.T01:intron | 25.0% |
!! | TATGCAAATATTAGAGGTTT+TGG | - | Chr4:8662769-8662788 | MsG0480018692.01.T01:CDS | 25.0% |
!! | TTTAAACAAAGCATTTGCAA+CGG | + | Chr4:8663351-8663370 | None:intergenic | 25.0% |
!!! | TTTGGTCATGAATGTTTTTT+TGG | - | Chr4:8662823-8662842 | MsG0480018692.01.T01:CDS | 25.0% |
ATATACATACACCATCTTTG+GGG | + | Chr4:8662702-8662721 | None:intergenic | 30.0% | |
TTTCAACTGAATGTTGGATA+TGG | - | Chr4:8663275-8663294 | MsG0480018692.01.T01:intron | 30.0% | |
ATACTTCCTTGTTAGCATCT+TGG | - | Chr4:8662609-8662628 | MsG0480018692.01.T01:CDS | 35.0% | |
CTTGTCAACTTGAAAAGCTT+TGG | + | Chr4:8663405-8663424 | None:intergenic | 35.0% | |
TCCAATAGTTGTTGTCATAC+AGG | + | Chr4:8663456-8663475 | None:intergenic | 35.0% | |
TCCTGTATGACAACAACTAT+TGG | - | Chr4:8663452-8663471 | MsG0480018692.01.T01:CDS | 35.0% | |
TCTTCAAACATGTTGAAGCT+GGG | - | Chr4:8662979-8662998 | MsG0480018692.01.T01:CDS | 35.0% | |
TGATTGCAACACAAAAGTCT+TGG | + | Chr4:8662677-8662696 | None:intergenic | 35.0% | |
TTCTTCAAACATGTTGAAGC+TGG | - | Chr4:8662978-8662997 | MsG0480018692.01.T01:CDS | 35.0% | |
! | ATCTTCAGCTTTAACAAGTG+CGG | + | Chr4:8662958-8662977 | None:intergenic | 35.0% |
!!! | GTTTTTTTGGTTAGCTAGCT+AGG | - | Chr4:8662836-8662855 | MsG0480018692.01.T01:CDS | 35.0% |
AGAACTTCGTCGGAAATAAG+AGG | + | Chr4:8663380-8663399 | None:intergenic | 40.0% | |
ATAAGGATCTCTGTTCCTCT+AGG | + | Chr4:8663137-8663156 | None:intergenic | 40.0% | |
CAACACAAAAGTCTTGGAGA+GGG | + | Chr4:8662671-8662690 | None:intergenic | 40.0% | |
CATCAAACCAAGACAACAAC+CGG | - | Chr4:8663192-8663211 | MsG0480018692.01.T01:intron | 40.0% | |
GAGATCCTTATAGTACTCGA+AGG | - | Chr4:8663146-8663165 | MsG0480018692.01.T01:intron | 40.0% | |
GATGTCTTTGTGTTCCCAAT+TGG | - | Chr4:8663242-8663261 | MsG0480018692.01.T01:intron | 40.0% | |
GTCACTGTAGACCAACTATT+CGG | - | Chr4:8663038-8663057 | MsG0480018692.01.T01:CDS | 40.0% | |
TAACACGCTTGGTATCTCTT+TGG | - | Chr4:8663064-8663083 | MsG0480018692.01.T01:CDS | 40.0% | |
TAAGGATCTCTGTTCCTCTA+GGG | + | Chr4:8663136-8663155 | None:intergenic | 40.0% | |
TTGAGATCCTAGTGCATTAG+AGG | + | Chr4:8663009-8663028 | None:intergenic | 40.0% | |
TTGCAATCAAACCCCAAAGA+TGG | - | Chr4:8662688-8662707 | MsG0480018692.01.T01:CDS | 40.0% | |
! | AATAGTTGGTCTACAGTGAC+CGG | + | Chr4:8663038-8663057 | None:intergenic | 40.0% |
! | AGCTTTGGTAAGAACTTCGT+CGG | + | Chr4:8663390-8663409 | None:intergenic | 40.0% |
! | TCTTCAGCTTTAACAAGTGC+GGG | + | Chr4:8662957-8662976 | None:intergenic | 40.0% |
! | TTTACCAAGGTGCTCAACAA+GGG | - | Chr4:8663218-8663237 | MsG0480018692.01.T01:intron | 40.0% |
ACTAGGATCTCAAGTGACTC+CGG | - | Chr4:8663016-8663035 | MsG0480018692.01.T01:CDS | 45.0% | |
CCAAAGCCAAGATGCTAACA+AGG | + | Chr4:8662618-8662637 | None:intergenic | 45.0% | |
CCTTGTTAGCATCTTGGCTT+TGG | - | Chr4:8662615-8662634 | MsG0480018692.01.T01:CDS | 45.0% | |
CTATTCGGACTTAACACGCT+TGG | - | Chr4:8663053-8663072 | MsG0480018692.01.T01:CDS | 45.0% | |
GAATGTTGGATATGGCAACG+CGG | - | Chr4:8663283-8663302 | MsG0480018692.01.T01:intron | 45.0% | |
GAGTGCCTTCGAGTACTATA+AGG | + | Chr4:8663154-8663173 | None:intergenic | 45.0% | |
GCAACACAAAAGTCTTGGAG+AGG | + | Chr4:8662672-8662691 | None:intergenic | 45.0% | |
GCGTGTTAAGTCCGAATAGT+TGG | + | Chr4:8663052-8663071 | None:intergenic | 45.0% | |
GGACTTAGCAGTCAAAATCC+AGG | - | Chr4:8663317-8663336 | MsG0480018692.01.T01:intron | 45.0% | |
TAAAGAGCCGGTTGTTGTCT+TGG | + | Chr4:8663202-8663221 | None:intergenic | 45.0% | |
TTTGCAACGGTGATAACTCC+TGG | + | Chr4:8663338-8663357 | None:intergenic | 45.0% | |
! | CTTCAGCTTTAACAAGTGCG+GGG | + | Chr4:8662956-8662975 | None:intergenic | 45.0% |
! | CTTTACCAAGGTGCTCAACA+AGG | - | Chr4:8663217-8663236 | MsG0480018692.01.T01:intron | 45.0% |
!! | CTCGAAGGCACTCTTTATGT+TGG | - | Chr4:8663161-8663180 | MsG0480018692.01.T01:intron | 45.0% |
!!! | TGAGGGGGTTTTAAACCCTT+AGG | + | Chr4:8663107-8663126 | None:intergenic | 45.0% |
AAAAGTCTTGGAGAGGGCTG+GGG | + | Chr4:8662665-8662684 | None:intergenic | 50.0% | |
ACAAAAGTCTTGGAGAGGGC+TGG | + | Chr4:8662667-8662686 | None:intergenic | 50.0% | |
ATCACCCTTGTTGAGCACCT+TGG | + | Chr4:8663225-8663244 | None:intergenic | 50.0% | |
CAAAAGTCTTGGAGAGGGCT+GGG | + | Chr4:8662666-8662685 | None:intergenic | 50.0% | |
CCCTTAGGCACAAAATCACG+CGG | + | Chr4:8663092-8663111 | None:intergenic | 50.0% | |
GGGAATGCCTCTAATGCACT+AGG | - | Chr4:8662999-8663018 | MsG0480018692.01.T01:CDS | 50.0% | |
TGAGCACCTTGGTAAAGAGC+CGG | + | Chr4:8663214-8663233 | None:intergenic | 50.0% | |
! | CAACAACCGGCTCTTTACCA+AGG | - | Chr4:8663205-8663224 | MsG0480018692.01.T01:intron | 50.0% |
! | CCGCGTGATTTTGTGCCTAA+GGG | - | Chr4:8663089-8663108 | MsG0480018692.01.T01:CDS | 50.0% |
! | TCCGCGTGATTTTGTGCCTA+AGG | - | Chr4:8663088-8663107 | MsG0480018692.01.T01:CDS | 50.0% |
!! | TTCCTCTAGGGTGGATGTGA+GGG | + | Chr4:8663124-8663143 | None:intergenic | 50.0% |
GGTCAGAAGCAAGGCAAGAG+AGG | + | Chr4:8662644-8662663 | None:intergenic | 55.0% | |
! | GGATCTCTGTTCCTCTAGGG+TGG | + | Chr4:8663133-8663152 | None:intergenic | 55.0% |
!! | GTTCCTCTAGGGTGGATGTG+AGG | + | Chr4:8663125-8663144 | None:intergenic | 55.0% |
!! | TCCTCTAGGGTGGATGTGAG+GGG | + | Chr4:8663123-8663142 | None:intergenic | 55.0% |
!! | CCTCTAGGGTGGATGTGAGG+GGG | + | Chr4:8663122-8663141 | None:intergenic | 60.0% |
CCCCCTCACATCCACCCTAG+AGG | - | Chr4:8663119-8663138 | MsG0480018692.01.T01:CDS | 65.0% | |
GAGGGCTGGGGTCAGAAGCA+AGG | + | Chr4:8662653-8662672 | None:intergenic | 65.0% | |
GGCAACGCGGTTGCTATCGC+TGG | - | Chr4:8663296-8663315 | MsG0480018692.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 8662598 | 8663487 | 8662598 | ID=MsG0480018692.01;Name=MsG0480018692.01 |
Chr4 | mRNA | 8662598 | 8663487 | 8662598 | ID=MsG0480018692.01.T01;Parent=MsG0480018692.01;Name=MsG0480018692.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|0|0.5|2|0|226 |
Chr4 | exon | 8663370 | 8663487 | 8663370 | ID=MsG0480018692.01.T01:exon:2075;Parent=MsG0480018692.01.T01 |
Chr4 | exon | 8662598 | 8663160 | 8662598 | ID=MsG0480018692.01.T01:exon:2074;Parent=MsG0480018692.01.T01 |
Chr4 | CDS | 8663370 | 8663487 | 8663370 | ID=MsG0480018692.01.T01:cds;Parent=MsG0480018692.01.T01 |
Chr4 | CDS | 8662598 | 8663160 | 8662598 | ID=MsG0480018692.01.T01:cds;Parent=MsG0480018692.01.T01 |
Gene Sequence |
Protein sequence |