Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044001.01.T01 | AFK37334.1 | 94.954 | 218 | 11 | 0 | 1 | 218 | 19 | 236 | 2.81E-155 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044001.01.T01 | P21745 | 53.061 | 196 | 83 | 4 | 13 | 204 | 68 | 258 | 1.32E-64 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044001.01.T01 | I3SAP2 | 94.954 | 218 | 11 | 0 | 1 | 218 | 19 | 236 | 1.34e-155 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000897.01 | MsG0880044001.01 | 0.814063 | 1.864776e-51 | 1.238571e-48 |
| MsG0180001029.01 | MsG0880044001.01 | 0.808249 | 3.398548e-50 | 1.933675e-47 |
| MsG0880043997.01 | MsG0880044001.01 | 0.813818 | 2.111541e-51 | 1.393204e-48 |
| MsG0880044001.01 | MsG0880044026.01 | 0.814979 | 1.169400e-51 | 7.961752e-49 |
| MsG0880044001.01 | MsG0880044028.01 | 0.953054 | 6.365436e-111 | 1.624399e-105 |
| MsG0880044001.01 | MsG0880045801.01 | 0.828422 | 9.069498e-55 | 9.010813e-52 |
| MsG0880044001.01 | MsG0880046434.01 | 0.829961 | 3.840530e-55 | 3.990933e-52 |
| MsG0880044001.01 | MsG0880046946.01 | 0.859663 | 3.538873e-63 | 9.419088e-60 |
| MsG0880044001.01 | MsG0880047312.01 | 0.803577 | 3.262923e-49 | 1.645641e-46 |
| MsG0880044001.01 | MsG0880047460.01 | 0.802777 | 4.776320e-49 | 2.360077e-46 |
| MsG0180003320.01 | MsG0880044001.01 | 0.801013 | 1.100031e-48 | 5.197668e-46 |
| MsG0180003600.01 | MsG0880044001.01 | 0.824647 | 7.206670e-54 | 6.422707e-51 |
| MsG0180005130.01 | MsG0880044001.01 | 0.835944 | 1.249016e-56 | 1.550657e-53 |
| MsG0180005143.01 | MsG0880044001.01 | 0.838633 | 2.561136e-57 | 3.451044e-54 |
| MsG0180006195.01 | MsG0880044001.01 | 0.814814 | 1.272198e-51 | 8.623261e-49 |
| MsG0680031200.01 | MsG0880044001.01 | 0.824787 | 6.679656e-54 | 5.976898e-51 |
| MsG0680032026.01 | MsG0880044001.01 | 0.811351 | 7.310534e-51 | 4.514670e-48 |
| MsG0680032461.01 | MsG0880044001.01 | 0.803506 | 3.374403e-49 | 1.698748e-46 |
| MsG0680033014.01 | MsG0880044001.01 | 0.813839 | 2.089121e-51 | 1.379166e-48 |
| MsG0680034238.01 | MsG0880044001.01 | 0.801350 | 9.385548e-49 | 4.472331e-46 |
| MsG0480018692.01 | MsG0880044001.01 | 0.826282 | 2.955455e-54 | 2.759393e-51 |
| MsG0480018693.01 | MsG0880044001.01 | 0.834198 | 3.442945e-56 | 4.056100e-53 |
| MsG0480018697.01 | MsG0880044001.01 | 0.825628 | 4.226216e-54 | 3.873065e-51 |
| MsG0480019325.01 | MsG0880044001.01 | 0.803554 | 3.298949e-49 | 1.662810e-46 |
| MsG0480020285.01 | MsG0880044001.01 | 0.818520 | 1.878180e-52 | 1.409120e-49 |
| MsG0480021063.01 | MsG0880044001.01 | 0.800059 | 1.721077e-48 | 7.937159e-46 |
| MsG0480021091.01 | MsG0880044001.01 | 0.850670 | 1.461746e-60 | 2.885032e-57 |
| MsG0580024535.01 | MsG0880044001.01 | 0.807842 | 4.149273e-50 | 2.335441e-47 |
| MsG0580025024.01 | MsG0880044001.01 | 0.809186 | 2.142448e-50 | 1.249537e-47 |
| MsG0580026521.01 | MsG0880044001.01 | 0.813310 | 2.731115e-51 | 1.777331e-48 |
| MsG0580027751.01 | MsG0880044001.01 | 0.805382 | 1.371180e-49 | 7.243816e-47 |
| MsG0680030382.01 | MsG0880044001.01 | 0.800036 | 1.740245e-48 | 8.020587e-46 |
| MsG0280007513.01 | MsG0880044001.01 | 0.828248 | 9.987947e-55 | 9.872762e-52 |
| MsG0280007677.01 | MsG0880044001.01 | 0.832503 | 9.108732e-56 | 1.020090e-52 |
| MsG0280007689.01 | MsG0880044001.01 | 0.804015 | 2.645982e-49 | 1.349560e-46 |
| MsG0280007869.01 | MsG0880044001.01 | 0.806911 | 6.537345e-50 | 3.591602e-47 |
| MsG0280007910.01 | MsG0880044001.01 | 0.811062 | 8.446681e-51 | 5.177069e-48 |
| MsG0280010270.01 | MsG0880044001.01 | 0.823778 | 1.153218e-53 | 1.002662e-50 |
| MsG0780036260.01 | MsG0880044001.01 | 0.800403 | 1.464933e-48 | 6.815216e-46 |
| MsG0780036835.01 | MsG0880044001.01 | 0.811564 | 6.572888e-51 | 4.082257e-48 |
| MsG0780038318.01 | MsG0880044001.01 | 0.845390 | 4.183340e-59 | 6.960859e-56 |
| MsG0780039686.01 | MsG0880044001.01 | 0.822812 | 1.938746e-53 | 1.640107e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044001.01.T01 | MTR_8g046000 | 94.954 | 218 | 11 | 0 | 1 | 218 | 19 | 236 | 4.43e-159 | 439 |
| MsG0880044001.01.T01 | MTR_8g045890 | 66.049 | 162 | 55 | 0 | 57 | 218 | 284 | 445 | 7.63e-76 | 235 |
| MsG0880044001.01.T01 | MTR_8g045890 | 66.049 | 162 | 55 | 0 | 57 | 218 | 325 | 486 | 3.04e-75 | 235 |
| MsG0880044001.01.T01 | MTR_8g045890 | 66.049 | 162 | 55 | 0 | 57 | 218 | 362 | 523 | 5.51e-75 | 235 |
| MsG0880044001.01.T01 | MTR_8g445140 | 50.000 | 244 | 70 | 4 | 13 | 204 | 59 | 302 | 8.50e-75 | 228 |
| MsG0880044001.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 137 | 328 | 4.18e-74 | 227 |
| MsG0880044001.01.T01 | MTR_8g445170 | 61.364 | 176 | 63 | 2 | 43 | 218 | 227 | 397 | 4.96e-74 | 229 |
| MsG0880044001.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 172 | 363 | 1.33e-73 | 227 |
| MsG0880044001.01.T01 | MTR_8g045880 | 61.458 | 192 | 66 | 2 | 35 | 218 | 174 | 365 | 1.97e-73 | 227 |
| MsG0880044001.01.T01 | MTR_1g045860 | 54.762 | 210 | 82 | 5 | 13 | 218 | 69 | 269 | 1.84e-72 | 221 |
| MsG0880044001.01.T01 | MTR_2g081770 | 48.980 | 196 | 92 | 4 | 13 | 204 | 79 | 270 | 1.84e-60 | 191 |
| MsG0880044001.01.T01 | MTR_2g081610 | 46.429 | 196 | 96 | 3 | 11 | 204 | 71 | 259 | 2.08e-60 | 191 |
| MsG0880044001.01.T01 | MTR_2g081590 | 46.907 | 194 | 94 | 3 | 13 | 204 | 73 | 259 | 3.79e-58 | 185 |
| MsG0880044001.01.T01 | MTR_8g044290 | 59.864 | 147 | 59 | 0 | 35 | 181 | 197 | 343 | 4.44e-55 | 182 |
| MsG0880044001.01.T01 | MTR_3g109490 | 34.234 | 222 | 121 | 9 | 7 | 204 | 101 | 321 | 2.41e-34 | 125 |
| MsG0880044001.01.T01 | MTR_1g008460 | 34.272 | 213 | 114 | 7 | 12 | 203 | 88 | 295 | 4.35e-33 | 121 |
| MsG0880044001.01.T01 | MTR_1g008470 | 36.916 | 214 | 110 | 9 | 12 | 203 | 88 | 298 | 1.42e-32 | 119 |
| MsG0880044001.01.T01 | MTR_1g008590 | 36.697 | 218 | 106 | 9 | 12 | 203 | 112 | 323 | 1.20e-31 | 117 |
| MsG0880044001.01.T01 | MTR_1g008560 | 36.574 | 216 | 112 | 8 | 12 | 203 | 114 | 328 | 1.67e-31 | 117 |
| MsG0880044001.01.T01 | MTR_1g008530 | 35.648 | 216 | 114 | 8 | 12 | 203 | 8 | 222 | 2.39e-31 | 114 |
| MsG0880044001.01.T01 | MTR_0312s0030 | 36.697 | 218 | 106 | 9 | 12 | 203 | 112 | 323 | 2.83e-31 | 117 |
| MsG0880044001.01.T01 | MTR_1g007520 | 36.697 | 218 | 106 | 9 | 12 | 203 | 112 | 323 | 2.83e-31 | 117 |
| MsG0880044001.01.T01 | MTR_1g008580 | 42.336 | 137 | 72 | 4 | 74 | 203 | 34 | 170 | 2.99e-31 | 112 |
| MsG0880044001.01.T01 | MTR_1g008500 | 36.111 | 216 | 112 | 8 | 12 | 203 | 170 | 383 | 2.85e-30 | 115 |
| MsG0880044001.01.T01 | MTR_1g008510 | 36.574 | 216 | 108 | 8 | 12 | 203 | 114 | 324 | 3.67e-30 | 114 |
| MsG0880044001.01.T01 | MTR_1g008450 | 40.000 | 135 | 76 | 4 | 74 | 203 | 177 | 311 | 1.14e-25 | 102 |
| MsG0880044001.01.T01 | MTR_3g116270 | 30.734 | 218 | 125 | 7 | 13 | 206 | 292 | 507 | 3.06e-22 | 94.4 |
| MsG0880044001.01.T01 | MTR_3g107830 | 38.514 | 148 | 81 | 5 | 67 | 204 | 108 | 255 | 9.84e-22 | 90.5 |
| MsG0880044001.01.T01 | MTR_3g116320 | 31.193 | 218 | 124 | 7 | 13 | 206 | 474 | 689 | 1.27e-21 | 92.8 |
| MsG0880044001.01.T01 | MTR_4g069680 | 37.838 | 148 | 82 | 6 | 67 | 204 | 139 | 286 | 5.36e-20 | 86.3 |
| MsG0880044001.01.T01 | MTR_3g116410 | 37.838 | 148 | 82 | 5 | 67 | 204 | 128 | 275 | 1.64e-19 | 84.7 |
| MsG0880044001.01.T01 | MTR_4g069570 | 36.364 | 154 | 84 | 6 | 65 | 205 | 184 | 336 | 3.98e-18 | 81.6 |
| MsG0880044001.01.T01 | MTR_3g116380 | 31.169 | 231 | 125 | 10 | 4 | 205 | 78 | 303 | 6.41e-18 | 80.9 |
| MsG0880044001.01.T01 | MTR_4g069550 | 30.065 | 153 | 91 | 7 | 67 | 205 | 313 | 463 | 3.27e-12 | 65.5 |
| MsG0880044001.01.T01 | MTR_5g033350 | 30.968 | 155 | 96 | 5 | 57 | 202 | 46 | 198 | 4.86e-12 | 63.2 |
| MsG0880044001.01.T01 | MTR_4g133840 | 32.298 | 161 | 97 | 7 | 52 | 202 | 28 | 186 | 7.53e-12 | 62.4 |
| MsG0880044001.01.T01 | MTR_5g033340 | 30.968 | 155 | 96 | 5 | 57 | 202 | 225 | 377 | 1.76e-11 | 63.2 |
| MsG0880044001.01.T01 | MTR_4g068420 | 30.597 | 134 | 74 | 6 | 78 | 205 | 1 | 121 | 7.78e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044001.01.T01 | AT5G25610 | 37.054 | 224 | 111 | 9 | 7 | 203 | 170 | 390 | 2.57e-31 | 118 |
| MsG0880044001.01.T01 | AT1G70370 | 32.192 | 146 | 87 | 5 | 67 | 202 | 479 | 622 | 7.71e-13 | 67.4 |
| MsG0880044001.01.T01 | AT1G70370 | 32.192 | 146 | 87 | 5 | 67 | 202 | 479 | 622 | 7.71e-13 | 67.4 |
Find 48 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCGTCAAGCAAATT+TGG | 0.185829 | 8:+34137041 | None:intergenic |
| GTTGAATACTGGAAAGCTTT+TGG | 0.241403 | 8:+34137480 | None:intergenic |
| ACGAAAATTAAGTCATATTC+AGG | 0.260765 | 8:-34137278 | MsG0880044001.01.T01:CDS |
| GGCAAATTCCTTCATTGTTT+CGG | 0.292399 | 8:+34137316 | None:intergenic |
| TGTTCGGAATGGTTGAATAC+TGG | 0.348637 | 8:+34137469 | None:intergenic |
| AACTTACATGGTTCCATTGT+TGG | 0.360469 | 8:-34137126 | MsG0880044001.01.T01:CDS |
| GATTCACTTGCAACAGGAAT+AGG | 0.379182 | 8:+34136954 | None:intergenic |
| CAGCCTTGTTACCAACAAAA+TGG | 0.391110 | 8:+34136988 | None:intergenic |
| TTTAATAATGCAGACATTGA+AGG | 0.399608 | 8:-34137557 | MsG0880044001.01.T01:CDS |
| ATTCAACCATTCCGAACAAT+AGG | 0.412309 | 8:-34137464 | MsG0880044001.01.T01:CDS |
| ATATCCAAATATCATTTAGA+TGG | 0.413763 | 8:+34136914 | None:intergenic |
| TGGCAGACAGGGATAGTTCC+AGG | 0.415844 | 8:+34137008 | None:intergenic |
| TTACTTCTTCCACTACATAT+TGG | 0.433811 | 8:+34137234 | None:intergenic |
| GTTCCATTGTTGGCCTCTGA+TGG | 0.457551 | 8:-34137116 | MsG0880044001.01.T01:CDS |
| TATAGTCTTGACGAGATTTG+TGG | 0.471610 | 8:-34137383 | MsG0880044001.01.T01:CDS |
| AATATGTAGTGGAAGAAGTA+AGG | 0.480623 | 8:-34137232 | MsG0880044001.01.T01:CDS |
| TCATCAGATTCACTTGCAAC+AGG | 0.481970 | 8:+34136948 | None:intergenic |
| AACTTGTCTTCTCCGATAGC+AGG | 0.508034 | 8:+34137353 | None:intergenic |
| TTGGTAACAAGGCTGTTGCT+TGG | 0.508285 | 8:-34136980 | MsG0880044001.01.T01:CDS |
| TCGGCAACCATCCTATTGTT+CGG | 0.521145 | 8:+34137453 | None:intergenic |
| AACCATCCTATTGTTCGGAA+TGG | 0.524994 | 8:+34137458 | None:intergenic |
| GATTCATACCTCTTGTGTCA+TGG | 0.531056 | 8:+34137063 | None:intergenic |
| AACATCCTCCGAAACAATGA+AGG | 0.533172 | 8:-34137324 | MsG0880044001.01.T01:CDS |
| GAATTTGCCATTTCAAAACT+CGG | 0.533199 | 8:-34137302 | MsG0880044001.01.T01:CDS |
| TTGGAAAACGACCTATACCC+TGG | 0.535252 | 8:-34137521 | MsG0880044001.01.T01:CDS |
| AATTTGCCATTTCAAAACTC+GGG | 0.540236 | 8:-34137301 | MsG0880044001.01.T01:CDS |
| GAAGTTCTCAAAGTCAAGCC+TGG | 0.543141 | 8:-34137026 | MsG0880044001.01.T01:CDS |
| TGTGGAGGTCCACCTGCTAT+CGG | 0.544677 | 8:-34137365 | MsG0880044001.01.T01:CDS |
| TTGTTGATGCATTCACTTGG+TGG | 0.566717 | 8:+34137147 | None:intergenic |
| AAATTCCTTCATTGTTTCGG+AGG | 0.567274 | 8:+34137319 | None:intergenic |
| GAATGCATCAACAACTTACA+TGG | 0.567371 | 8:-34137138 | MsG0880044001.01.T01:CDS |
| TTACCAACAAAATGGCAGAC+AGG | 0.571358 | 8:+34136996 | None:intergenic |
| TGGAACTAAAGTTAATGCAT+TGG | 0.576995 | 8:-34137096 | MsG0880044001.01.T01:CDS |
| ATTAACTTTAGTTCCATCAG+AGG | 0.588740 | 8:+34137103 | None:intergenic |
| GTTCCATCAGAGGCCAACAA+TGG | 0.589021 | 8:+34137113 | None:intergenic |
| TTCTCCACTACATTTCCAGA+CGG | 0.593237 | 8:+34137413 | None:intergenic |
| AACCATTCCGAACAATAGGA+TGG | 0.593760 | 8:-34137460 | MsG0880044001.01.T01:CDS |
| AAATCAAGACCAATATGTAG+TGG | 0.595851 | 8:-34137243 | MsG0880044001.01.T01:CDS |
| TACCAACAAAATGGCAGACA+GGG | 0.611221 | 8:+34136997 | None:intergenic |
| GTAAGGAAAATTGCAGACAA+AGG | 0.616323 | 8:-34137215 | MsG0880044001.01.T01:CDS |
| AGTCTTGACGAGATTTGTGG+AGG | 0.619391 | 8:-34137380 | MsG0880044001.01.T01:CDS |
| TTGTCTTCTCCGATAGCAGG+TGG | 0.637131 | 8:+34137356 | None:intergenic |
| TCAACCGTCTGGAAATGTAG+TGG | 0.641252 | 8:-34137417 | MsG0880044001.01.T01:CDS |
| TCATTTAGATGGCACAAGGA+CGG | 0.647569 | 8:+34136925 | None:intergenic |
| GCTTGTCACCATGACACAAG+AGG | 0.650773 | 8:-34137071 | MsG0880044001.01.T01:CDS |
| TACCCTGGCAAGAAAATGAG+CGG | 0.655096 | 8:-34137506 | MsG0880044001.01.T01:CDS |
| AAGTTGTTGATGCATTCACT+TGG | 0.662304 | 8:+34137144 | None:intergenic |
| AATATCATTTAGATGGCACA+AGG | 0.695284 | 8:+34136921 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACGAAAATTAAGTCATATTC+AGG | - | Chr8:34137214-34137233 | MsG0880044001.01.T01:CDS | 25.0% |
| ! | TTTAATAATGCAGACATTGA+AGG | - | Chr8:34136935-34136954 | MsG0880044001.01.T01:CDS | 25.0% |
| AAATCAAGACCAATATGTAG+TGG | - | Chr8:34137249-34137268 | MsG0880044001.01.T01:CDS | 30.0% | |
| TGGAACTAAAGTTAATGCAT+TGG | - | Chr8:34137396-34137415 | MsG0880044001.01.T01:CDS | 30.0% | |
| TTACTTCTTCCACTACATAT+TGG | + | Chr8:34137261-34137280 | None:intergenic | 30.0% | |
| ! | AATATGTAGTGGAAGAAGTA+AGG | - | Chr8:34137260-34137279 | MsG0880044001.01.T01:CDS | 30.0% |
| ! | AATTTGCCATTTCAAAACTC+GGG | - | Chr8:34137191-34137210 | MsG0880044001.01.T01:CDS | 30.0% |
| ! | ATTAACTTTAGTTCCATCAG+AGG | + | Chr8:34137392-34137411 | None:intergenic | 30.0% |
| ! | GAATTTGCCATTTCAAAACT+CGG | - | Chr8:34137190-34137209 | MsG0880044001.01.T01:CDS | 30.0% |
| ! | TGAAGGCAAATTACTCTTTT+TGG | - | Chr8:34136952-34136971 | MsG0880044001.01.T01:CDS | 30.0% |
| AAATTCCTTCATTGTTTCGG+AGG | + | Chr8:34137176-34137195 | None:intergenic | 35.0% | |
| AACTTACATGGTTCCATTGT+TGG | - | Chr8:34137366-34137385 | MsG0880044001.01.T01:CDS | 35.0% | |
| AAGTTGTTGATGCATTCACT+TGG | + | Chr8:34137351-34137370 | None:intergenic | 35.0% | |
| AGAACTTCGTCAAGCAAATT+TGG | + | Chr8:34137454-34137473 | None:intergenic | 35.0% | |
| ATTCAACCATTCCGAACAAT+AGG | - | Chr8:34137028-34137047 | MsG0880044001.01.T01:CDS | 35.0% | |
| GAATGCATCAACAACTTACA+TGG | - | Chr8:34137354-34137373 | MsG0880044001.01.T01:CDS | 35.0% | |
| GGCAAATTCCTTCATTGTTT+CGG | + | Chr8:34137179-34137198 | None:intergenic | 35.0% | |
| GTAAGGAAAATTGCAGACAA+AGG | - | Chr8:34137277-34137296 | MsG0880044001.01.T01:CDS | 35.0% | |
| ! | GTTGAATACTGGAAAGCTTT+TGG | + | Chr8:34137015-34137034 | None:intergenic | 35.0% |
| ! | TATAGTCTTGACGAGATTTG+TGG | - | Chr8:34137109-34137128 | MsG0880044001.01.T01:CDS | 35.0% |
| AACATCCTCCGAAACAATGA+AGG | - | Chr8:34137168-34137187 | MsG0880044001.01.T01:CDS | 40.0% | |
| AACCATCCTATTGTTCGGAA+TGG | + | Chr8:34137037-34137056 | None:intergenic | 40.0% | |
| AACCATTCCGAACAATAGGA+TGG | - | Chr8:34137032-34137051 | MsG0880044001.01.T01:CDS | 40.0% | |
| GATTCACTTGCAACAGGAAT+AGG | + | Chr8:34137541-34137560 | None:intergenic | 40.0% | |
| GATTCATACCTCTTGTGTCA+TGG | + | Chr8:34137432-34137451 | None:intergenic | 40.0% | |
| TACCAACAAAATGGCAGACA+GGG | + | Chr8:34137498-34137517 | None:intergenic | 40.0% | |
| TCATCAGATTCACTTGCAAC+AGG | + | Chr8:34137547-34137566 | None:intergenic | 40.0% | |
| TGTTCGGAATGGTTGAATAC+TGG | + | Chr8:34137026-34137045 | None:intergenic | 40.0% | |
| TTACCAACAAAATGGCAGAC+AGG | + | Chr8:34137499-34137518 | None:intergenic | 40.0% | |
| TTCTCCACTACATTTCCAGA+CGG | + | Chr8:34137082-34137101 | None:intergenic | 40.0% | |
| TTGTTGATGCATTCACTTGG+TGG | + | Chr8:34137348-34137367 | None:intergenic | 40.0% | |
| ! | TCATTTTCTTGCCAGGGTAT+AGG | + | Chr8:34136985-34137004 | None:intergenic | 40.0% |
| !! | CAGCCTTGTTACCAACAAAA+TGG | + | Chr8:34137507-34137526 | None:intergenic | 40.0% |
| !!! | CTGCCATTTTGTTGGTAACA+AGG | - | Chr8:34137501-34137520 | MsG0880044001.01.T01:CDS | 40.0% |
| !!! | GGTTGAGTAGCTTTTTCGAT+CGG | + | Chr8:34137061-34137080 | None:intergenic | 40.0% |
| !!! | TTTCGTCCCGAGTTTTGAAA+TGG | + | Chr8:34137200-34137219 | None:intergenic | 40.0% |
| AACTTGTCTTCTCCGATAGC+AGG | + | Chr8:34137142-34137161 | None:intergenic | 45.0% | |
| AGTCTTGACGAGATTTGTGG+AGG | - | Chr8:34137112-34137131 | MsG0880044001.01.T01:CDS | 45.0% | |
| GAAAAAGCTACTCAACCGTC+TGG | - | Chr8:34137064-34137083 | MsG0880044001.01.T01:CDS | 45.0% | |
| GAAGTTCTCAAAGTCAAGCC+TGG | - | Chr8:34137466-34137485 | MsG0880044001.01.T01:CDS | 45.0% | |
| TACCCTGGCAAGAAAATGAG+CGG | - | Chr8:34136986-34137005 | MsG0880044001.01.T01:CDS | 45.0% | |
| TCAACCGTCTGGAAATGTAG+TGG | - | Chr8:34137075-34137094 | MsG0880044001.01.T01:CDS | 45.0% | |
| TCGGCAACCATCCTATTGTT+CGG | + | Chr8:34137042-34137061 | None:intergenic | 45.0% | |
| TTGGAAAACGACCTATACCC+TGG | - | Chr8:34136971-34136990 | MsG0880044001.01.T01:CDS | 45.0% | |
| ! | TTGGTAACAAGGCTGTTGCT+TGG | - | Chr8:34137512-34137531 | MsG0880044001.01.T01:CDS | 45.0% |
| !!! | ATCCCTGTCTGCCATTTTGT+TGG | - | Chr8:34137493-34137512 | MsG0880044001.01.T01:CDS | 45.0% |
| GCTTGTCACCATGACACAAG+AGG | - | Chr8:34137421-34137440 | MsG0880044001.01.T01:CDS | 50.0% | |
| GTTCCATCAGAGGCCAACAA+TGG | + | Chr8:34137382-34137401 | None:intergenic | 50.0% | |
| TTGTCTTCTCCGATAGCAGG+TGG | + | Chr8:34137139-34137158 | None:intergenic | 50.0% | |
| ! | AGACCGCTCATTTTCTTGCC+AGG | + | Chr8:34136992-34137011 | None:intergenic | 50.0% |
| ! | GACCGCTCATTTTCTTGCCA+GGG | + | Chr8:34136991-34137010 | None:intergenic | 50.0% |
| ! | GTTCCATTGTTGGCCTCTGA+TGG | - | Chr8:34137376-34137395 | MsG0880044001.01.T01:CDS | 50.0% |
| TGGCAGACAGGGATAGTTCC+AGG | + | Chr8:34137487-34137506 | None:intergenic | 55.0% | |
| TGTGGAGGTCCACCTGCTAT+CGG | - | Chr8:34137127-34137146 | MsG0880044001.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 34136929 | 34137585 | 34136929 | ID=MsG0880044001.01;Name=MsG0880044001.01 |
| Chr8 | mRNA | 34136929 | 34137585 | 34136929 | ID=MsG0880044001.01.T01;Parent=MsG0880044001.01;Name=MsG0880044001.01.T01;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|218 |
| Chr8 | exon | 34136929 | 34137585 | 34136929 | ID=MsG0880044001.01.T01:exon:8168;Parent=MsG0880044001.01.T01 |
| Chr8 | CDS | 34136929 | 34137585 | 34136929 | ID=MsG0880044001.01.T01:cds;Parent=MsG0880044001.01.T01 |
| Gene Sequence |
| Protein sequence |
